BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00025157
         (391 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018682682.1| PREDICTED: pentatricopeptide repeat-containi...    56   2e-06
gb|PKU87070.1| Pentatricopeptide repeat-containing protein [Dend...    55   5e-06
gb|PKA60767.1| Pentatricopeptide repeat-containing protein [Apos...    54   1e-05

>ref|XP_018682682.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial [Musa acuminata subsp. malaccensis]
          Length = 530

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 36/82 (43%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
 Frame = +2

Query: 149 LLRLLCTSPQXXXXXXXXXXXXXXXGLAPSPSESKLLESFHSLIKSHHTSN---FAFTSS 319
           L + LCTSP                  + SP+ESKLL++ H LI+ HH  N       +S
Sbjct: 19  LCKPLCTSPSPIDSPPSDITIATA---SISPTESKLLDNLHVLIRDHHRDNPHLAPSAAS 75

Query: 320 LPPTLTIPSLSSAFSALYPSGP 385
            PP LTIPSLSS+FS L PS P
Sbjct: 76  PPPDLTIPSLSSSFSNLSPSPP 97


>gb|PKU87070.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 548

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
 Frame = +2

Query: 236 SPSESKLLESFHSLIKSHHTS--NFAFTSSLPPTLTIPSLSSAFSALYPSGPLP 391
           SP+ES LLE  H +IK HH +  N   ++S PP LTIP LSS+FS+++P  P P
Sbjct: 64  SPAESHLLEKLHFIIKDHHRNHPNPDPSASPPPNLTIPDLSSSFSSIFPLPPSP 117


>gb|PKA60767.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 523

 Score = 53.9 bits (128), Expect = 1e-05
 Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
 Frame = +2

Query: 236 SPSESKLLESFHSLIKSHHTS--NFAFTSSLPPTLTIPSLSSAFSALYPSGPLP 391
           SP+ES LL+  HSLIK+HH S  N   +++ PP LTIP LSS+FS L P  P P
Sbjct: 36  SPAESHLLDHVHSLIKNHHRSHPNPDPSAAPPPDLTIPDLSSSFSILCPLPPSP 89