BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00023642
         (501 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH94519.1| Like-Sm (LSM) domain-containing protein [Cynara c...    57   5e-08
dbj|BAS93313.1| Os05g0314100, partial [Oryza sativa Japonica Group]    53   2e-06
ref|WP_082181557.1| hypothetical protein [Acinetobacter baumannii]     53   2e-06
gb|KDO87210.1| hypothetical protein CISIN_1g033904mg [Citrus sin...    53   3e-06
gb|PLY72753.1| hypothetical protein LSAT_4X184221 [Lactuca sativa]     53   4e-06
gb|KMT05997.1| hypothetical protein BVRB_7g164830 isoform B [Bet...    53   4e-06
emb|CDP05562.1| unnamed protein product [Coffea canephora]             53   4e-06
ref|XP_013447367.1| small nuclear ribonucleoprotein [Medicago tr...    53   4e-06
gb|KDO87215.1| hypothetical protein CISIN_1g033904mg [Citrus sin...    53   5e-06
gb|EEC72234.1| hypothetical protein OsI_05349 [Oryza sativa Indi...    53   5e-06
gb|AFK38738.1| unknown [Medicago truncatula]                           53   5e-06
gb|KYP61501.1| putative small nuclear ribonucleoprotein Sm D2, p...    53   5e-06
gb|KRG92316.1| hypothetical protein GLYMA_20G204200 [Glycine max]      53   5e-06
ref|XP_006444355.1| probable small nuclear ribonucleoprotein Sm ...    53   5e-06
ref|XP_001761109.1| predicted protein [Physcomitrella patens]          53   5e-06
gb|PPR85715.1| hypothetical protein GOBAR_AA34981 [Gossypium bar...    53   6e-06
gb|KOM51267.1| hypothetical protein LR48_Vigan08g209400, partial...    53   6e-06
gb|PPR80962.1| hypothetical protein GOBAR_AA39754 [Gossypium bar...    53   6e-06
gb|PON67387.1| Small nuclear ribonucleoprotein Sm D [Parasponia ...    53   6e-06
dbj|GAY56554.1| hypothetical protein CUMW_172790 [Citrus unshiu]       53   6e-06

>gb|KVH94519.1| Like-Sm (LSM) domain-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 76

 Score = 57.4 bits (137), Expect = 5e-08
 Identities = 30/49 (61%), Positives = 33/49 (67%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK*GRRPTILMWASISKQSSLEWLS 149
           PVNKDRFISKM LRGDSVIIVLRNPK      + +  S+ K   L W S
Sbjct: 25  PVNKDRFISKMFLRGDSVIIVLRNPKKQALDLLFVVGSLRKLQPLTWRS 73


>dbj|BAS93313.1| Os05g0314100, partial [Oryza sativa Japonica Group]
          Length = 47

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3  PVNKDRFISKMLLRGDSVIIVLRNPK 80
          PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 22 PVNKDRFISKMFLRGDSVIIVLRNPK 47


>ref|WP_082181557.1| hypothetical protein [Acinetobacter baumannii]
          Length = 50

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 25  PVNKDRFISKMFLRGDSVIIVLRNPK 50


>gb|KDO87210.1| hypothetical protein CISIN_1g033904mg [Citrus sinensis]
          Length = 72

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 47  PVNKDRFISKMFLRGDSVIIVLRNPK 72


>gb|PLY72753.1| hypothetical protein LSAT_4X184221 [Lactuca sativa]
          Length = 82

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 57  PVNKDRFISKMFLRGDSVIIVLRNPK 82


>gb|KMT05997.1| hypothetical protein BVRB_7g164830 isoform B [Beta vulgaris subsp.
           vulgaris]
          Length = 82

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 57  PVNKDRFISKMFLRGDSVIIVLRNPK 82


>emb|CDP05562.1| unnamed protein product [Coffea canephora]
          Length = 82

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 57  PVNKDRFISKMFLRGDSVIIVLRNPK 82


>ref|XP_013447367.1| small nuclear ribonucleoprotein [Medicago truncatula]
 gb|KEH21394.1| small nuclear ribonucleoprotein [Medicago truncatula]
 gb|KOM30290.1| hypothetical protein LR48_Vigan1091s000200 [Vigna angularis]
 gb|KRH60445.1| hypothetical protein GLYMA_05G240800 [Glycine max]
 gb|PNT50775.1| hypothetical protein POPTR_002G204300v3 [Populus trichocarpa]
          Length = 82

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 57  PVNKDRFISKMFLRGDSVIIVLRNPK 82


>gb|KDO87215.1| hypothetical protein CISIN_1g033904mg [Citrus sinensis]
          Length = 94

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 69  PVNKDRFISKMFLRGDSVIIVLRNPK 94


>gb|EEC72234.1| hypothetical protein OsI_05349 [Oryza sativa Indica Group]
          Length = 96

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 71  PVNKDRFISKMFLRGDSVIIVLRNPK 96


>gb|AFK38738.1| unknown [Medicago truncatula]
          Length = 97

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 72  PVNKDRFISKMFLRGDSVIIVLRNPK 97


>gb|KYP61501.1| putative small nuclear ribonucleoprotein Sm D2, partial [Cajanus
           cajan]
          Length = 98

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 73  PVNKDRFISKMFLRGDSVIIVLRNPK 98


>gb|KRG92316.1| hypothetical protein GLYMA_20G204200 [Glycine max]
          Length = 98

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 73  PVNKDRFISKMFLRGDSVIIVLRNPK 98


>ref|XP_006444355.1| probable small nuclear ribonucleoprotein Sm D2 isoform X2 [Citrus
           clementina]
 ref|XP_006479966.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2 isoform
           X3 [Citrus sinensis]
 gb|ESR57595.1| hypothetical protein CICLE_v10022968mg [Citrus clementina]
 gb|KDO87209.1| hypothetical protein CISIN_1g033904mg [Citrus sinensis]
          Length = 99

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 74  PVNKDRFISKMFLRGDSVIIVLRNPK 99


>ref|XP_001761109.1| predicted protein [Physcomitrella patens]
          Length = 99

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 74  PVNKDRFISKMFLRGDSVIIVLRNPK 99


>gb|PPR85715.1| hypothetical protein GOBAR_AA34981 [Gossypium barbadense]
          Length = 102

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 77  PVNKDRFISKMFLRGDSVIIVLRNPK 102


>gb|KOM51267.1| hypothetical protein LR48_Vigan08g209400, partial [Vigna angularis]
          Length = 102

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 77  PVNKDRFISKMFLRGDSVIIVLRNPK 102


>gb|PPR80962.1| hypothetical protein GOBAR_AA39754 [Gossypium barbadense]
          Length = 103

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 78  PVNKDRFISKMFLRGDSVIIVLRNPK 103


>gb|PON67387.1| Small nuclear ribonucleoprotein Sm D [Parasponia andersonii]
          Length = 103

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 78  PVNKDRFISKMFLRGDSVIIVLRNPK 103


>dbj|GAY56554.1| hypothetical protein CUMW_172790 [Citrus unshiu]
          Length = 103

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   PVNKDRFISKMLLRGDSVIIVLRNPK 80
           PVNKDRFISKM LRGDSVIIVLRNPK
Sbjct: 78  PVNKDRFISKMFLRGDSVIIVLRNPK 103