BLASTX nr result

ID: Ophiopogon23_contig00023470 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00023470
         (667 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020264187.1| LOW QUALITY PROTEIN: protein MODIFIER OF SNC...    76   3e-12
ref|XP_020268057.1| protein MODIFIER OF SNC1 1-like [Asparagus o...    74   2e-11

>ref|XP_020264187.1| LOW QUALITY PROTEIN: protein MODIFIER OF SNC1 1-like, partial
            [Asparagus officinalis]
          Length = 1437

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 52/116 (44%), Positives = 62/116 (53%)
 Frame = -3

Query: 665  SSDVQNNNQESGPGATSIADAISVEASSGTSACQTETIKHVDDSGAKKPAVSSDLSSNXX 486
            SSDVQN NQE+GPG     D IS EA  GTS C +E +K   DSG KKPA S  LSS+  
Sbjct: 828  SSDVQNGNQETGPG-----DKISTEAVCGTSDCHSEQMKRAVDSGGKKPAQS--LSSS-- 878

Query: 485  XXXXXXXXXXXXXXXXXSLHQRQDTNAPTKTTLVTTSDIQHNTSSKQKQVGYRKKH 318
                             S+   Q+     +     TSDI HNT S+QKQ+GYRKK+
Sbjct: 879  -------VQSSVVTEAQSVSLGQEIKTTGEIAPEATSDILHNTVSRQKQLGYRKKN 927


>ref|XP_020268057.1| protein MODIFIER OF SNC1 1-like [Asparagus officinalis]
          Length = 1430

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 48/116 (41%), Positives = 59/116 (50%)
 Frame = -3

Query: 665  SSDVQNNNQESGPGATSIADAISVEASSGTSACQTETIKHVDDSGAKKPAVSSDLSSNXX 486
            SSDVQNN Q++GPG     D  S EA  GT+   +E +K   DSG KKPA +S  S    
Sbjct: 820  SSDVQNNIQDTGPG-----DKFSTEALCGTTDPHSEEMKQAVDSGGKKPAQTSSSSGQSS 874

Query: 485  XXXXXXXXXXXXXXXXXSLHQRQDTNAPTKTTLVTTSDIQHNTSSKQKQVGYRKKH 318
                              +   Q+     +  L TTSDI HNT S+QKQVGYRKK+
Sbjct: 875  VVTEARA-----------VSPGQEIKPTVEIALETTSDILHNTISRQKQVGYRKKN 919


Top