BLASTX nr result
ID: Ophiopogon23_contig00023440
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00023440
(1340 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020245280.1| glycine-rich RNA-binding protein 3, mitochon... 294 4e-92
ref|XP_020253325.1| LOW QUALITY PROTEIN: glycine-rich RNA-bindin... 269 4e-83
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec... 267 5e-79
gb|OVA17614.1| RNA recognition motif domain [Macleaya cordata] 267 5e-79
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec... 267 6e-79
gb|PIA51496.1| hypothetical protein AQUCO_01100380v1 [Aquilegia ... 264 5e-78
ref|XP_023904095.1| cleavage and polyadenylation specificity fac... 264 6e-78
ref|XP_023904094.1| cleavage and polyadenylation specificity fac... 264 6e-78
gb|POE45696.1| cleavage and polyadenylation specificity factor s... 264 8e-78
ref|XP_021818512.1| cleavage and polyadenylation specificity fac... 260 2e-76
ref|XP_020426099.1| cleavage and polyadenylation specificity fac... 259 5e-76
ref|XP_018820439.1| PREDICTED: cleavage and polyadenylation spec... 258 9e-76
dbj|GAV59792.1| RRM_1 domain-containing protein [Cephalotus foll... 258 1e-75
ref|XP_008805116.1| PREDICTED: cleavage and polyadenylation spec... 256 6e-75
ref|XP_010929959.1| PREDICTED: cleavage and polyadenylation spec... 253 6e-74
ref|XP_021746718.1| cleavage and polyadenylation specificity fac... 253 9e-74
dbj|GAY43962.1| hypothetical protein CUMW_078620 [Citrus unshiu] 253 1e-73
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 253 1e-73
ref|XP_021901218.1| cleavage and polyadenylation specificity fac... 252 2e-73
ref|XP_015894525.1| PREDICTED: cleavage and polyadenylation spec... 252 2e-73
>ref|XP_020245280.1| glycine-rich RNA-binding protein 3, mitochondrial-like [Asparagus
officinalis]
Length = 421
Score = 294 bits (753), Expect = 4e-92
Identities = 152/225 (67%), Positives = 165/225 (73%), Gaps = 1/225 (0%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MMH QNMMGAGFDPT+MGRGGPYG F+GPAF GMMP VAPH+NPAFFGR
Sbjct: 213 MMHAQNMMGAGFDPTFMGRGGPYGGFSGPAFAGMMPXXX---------VAPHVNPAFFGR 263
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXGEEHGRTRESSYGGDDGASEYGYGEVNHER 896
GM+ANGMG+MG+ GM+ Q GEE GRTRESSYGGDDGAS+YGYGEVNHER
Sbjct: 264 GMNANGMGMMGNNGMDGQMWGDAGMGGGWNGEEQGRTRESSYGGDDGASDYGYGEVNHER 323
Query: 895 GGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRERHREEKDGXXXXXXXXXXX 716
GGGRSNASREKERGS+ ERR RD+KEQDWDRSDRERHREEK+G
Sbjct: 324 GGGRSNASREKERGSD-------ERRYRDEKEQDWDRSDRERHREEKEGYRDYRSRDRDY 376
Query: 715 DNEVDWDRGQXXXXXXXXSYMQEDVHGSRSRDADYGKEYGKRRRE 581
DNEVDWDRGQ SYMQED H RSRDADYG++YGKRRRE
Sbjct: 377 DNEVDWDRGQSSNRSRSRSYMQEDDHRPRSRDADYGRDYGKRRRE 421
>ref|XP_020253325.1| LOW QUALITY PROTEIN: glycine-rich RNA-binding protein 3,
mitochondrial [Asparagus officinalis]
Length = 370
Score = 269 bits (688), Expect = 4e-83
Identities = 147/225 (65%), Positives = 156/225 (69%), Gaps = 1/225 (0%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MM+P NMMGAGFDPT+MGRGGPYG F GPAFTGMMPPFQAV GL GVAPH+NPAFFGR
Sbjct: 166 MMNPHNMMGAGFDPTFMGRGGPYGGFPGPAFTGMMPPFQAV---GLPGVAPHVNPAFFGR 222
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXGEEHGRTRESSYGGDDGASEYGYGEVNHER 896
GM NGMGVMGS GME Q G ESSYGGDDGASEYGYGE NH+R
Sbjct: 223 GMPVNGMGVMGSNGMEGQMWGDAGMG--------GAREESSYGGDDGASEYGYGEANHDR 274
Query: 895 GGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRERHREEKDGXXXXXXXXXXX 716
GG +S A+REKERGS+ G SERR RDDKEQDWD S RERHRE++DG
Sbjct: 275 GG-KSTAAREKERGSD----GYSERRKRDDKEQDWDGSGRERHREDRDGYRDYRSRDREY 329
Query: 715 DNEVDWDRGQXXXXXXXXSYMQEDVHGSRSRDADYGKEYGKRRRE 581
DNE DWDRGQ SYMQED RSRDAD YGKRRRE
Sbjct: 330 DNEADWDRGQSSSRSRSKSYMQEDERRPRSRDAD----YGKRRRE 370
>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_010650883.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_010650886.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_019075332.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
Length = 650
Score = 267 bits (682), Expect = 5e-79
Identities = 137/222 (61%), Positives = 163/222 (73%), Gaps = 6/222 (2%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
+MHPQ MMG+GFDPTYMGRGG YG F+G AF GM+P F AVN +GL+GVAPH+NPAFFGR
Sbjct: 422 LMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGR 481
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 905
GM+ANGMG+MG+TGM+ EEHGR TRESSYGGDDGAS+YGYGEVN
Sbjct: 482 GMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVN 541
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE-RHREEKDGXXXXXXX 728
HE+ G + ASREKERGSERD+SG SERR+RD++EQDW+RSD++ R+REEKDG
Sbjct: 542 HEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQR 601
Query: 727 XXXXDNEVDWDRGQ-XXXXXXXXSYMQEDVHGSRSRDADYGK 605
+NE DWDRGQ + ++ H SRSRD DYGK
Sbjct: 602 ERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGK 643
>gb|OVA17614.1| RNA recognition motif domain [Macleaya cordata]
Length = 654
Score = 267 bits (682), Expect = 5e-79
Identities = 140/222 (63%), Positives = 159/222 (71%), Gaps = 6/222 (2%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
+MHPQNMMGAGFDPTYMGRGG YG F GPAF GMMP F VN +GL GVAPH+NPAFFGR
Sbjct: 426 LMHPQNMMGAGFDPTYMGRGGGYGGFAGPAFPGMMPSFPGVNTMGLPGVAPHVNPAFFGR 485
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG---EEHGRTRESSYGGDDGASEYGYGEVN 905
G+SANGMG+MGSTGME E+ RTRESSYGGDDGAS+YGYG+ +
Sbjct: 486 GVSANGMGMMGSTGMEGHHPGMWSNTMMGGWVGDEQGRRTRESSYGGDDGASDYGYGDAS 545
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE-RHREEKDGXXXXXXX 728
ERGG + A RE+ER ER++SG SERR+ DD+EQDWDRSDR+ R+REEKDG
Sbjct: 546 QERGGKSNPAPRERERVPEREWSGNSERRHHDDREQDWDRSDRDRRYREEKDGHRDHRQR 605
Query: 727 XXXXDNEVDWDRGQXXXXXXXXSY-MQEDVHGSRSRDADYGK 605
DNE DWDRGQ S+ MQE+ H SRSRDADYGK
Sbjct: 606 ERDWDNEEDWDRGQSSSRTRSKSHMMQEEDHRSRSRDADYGK 647
>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
isoform X1 [Vitis vinifera]
Length = 656
Score = 267 bits (682), Expect = 6e-79
Identities = 137/222 (61%), Positives = 163/222 (73%), Gaps = 6/222 (2%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
+MHPQ MMG+GFDPTYMGRGG YG F+G AF GM+P F AVN +GL+GVAPH+NPAFFGR
Sbjct: 428 LMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGR 487
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 905
GM+ANGMG+MG+TGM+ EEHGR TRESSYGGDDGAS+YGYGEVN
Sbjct: 488 GMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVN 547
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE-RHREEKDGXXXXXXX 728
HE+ G + ASREKERGSERD+SG SERR+RD++EQDW+RSD++ R+REEKDG
Sbjct: 548 HEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQR 607
Query: 727 XXXXDNEVDWDRGQ-XXXXXXXXSYMQEDVHGSRSRDADYGK 605
+NE DWDRGQ + ++ H SRSRD DYGK
Sbjct: 608 ERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGK 649
>gb|PIA51496.1| hypothetical protein AQUCO_01100380v1 [Aquilegia coerulea]
gb|PIA51497.1| hypothetical protein AQUCO_01100380v1 [Aquilegia coerulea]
Length = 645
Score = 264 bits (675), Expect = 5e-78
Identities = 141/228 (61%), Positives = 161/228 (70%), Gaps = 5/228 (2%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MMHPQNMMGAG+DPTYMGRGG YG F GP F GMMP + VNAVGL GVAPH+NPAFFGR
Sbjct: 418 MMHPQNMMGAGYDPTYMGRGGGYGGFAGPVFPGMMPSYPGVNAVGLPGVAPHVNPAFFGR 477
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGRTRESSYGGDDGASEYGYGEVNH 902
GM ANGMG+MGS+GME +E G TRESSYGGDDGASEYGYG+ +H
Sbjct: 478 GMPANGMGMMGSSGMEGPHPGMWTDTSMGGWGGDEQGHTRESSYGGDDGASEYGYGDASH 537
Query: 901 ERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE-RHREEKDGXXXXXXXX 725
ERGG + A REK+RGSER++SG S+RR+RD++EQD+DRSD++ R+REEKDG
Sbjct: 538 ERGGRSNAAPREKDRGSEREWSGNSDRRHRDEREQDYDRSDKDRRYREEKDGHRDQRQRD 597
Query: 724 XXXDNEVDWDRGQXXXXXXXXSYM-QEDVHGSRSRDADYGKEYGKRRR 584
DN DWDRGQ S M ED H SRSRD EYGKRRR
Sbjct: 598 RDWDNGDDWDRGQPSSRSRSKSSMVHEDDHRSRSRDV----EYGKRRR 641
>ref|XP_023904095.1| cleavage and polyadenylation specificity factor subunit 6 isoform X2
[Quercus suber]
Length = 655
Score = 264 bits (675), Expect = 6e-78
Identities = 141/225 (62%), Positives = 156/225 (69%), Gaps = 9/225 (4%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MM+PQ MMG GFDPTYMGRGG YG F GPAF GM+P F AVN +GL+GVAPH+NPAFFGR
Sbjct: 424 MMNPQGMMGTGFDPTYMGRGGGYGGFPGPAFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 483
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 905
GM ANGMG+MGS GM+ EEHGR TRESSYGGDDGASEYGYGE N
Sbjct: 484 GMPANGMGMMGSAGMDGHHAGMWNDTSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEGN 543
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 737
HE+G S ASREKERGSERD+SG SERR+RD++EQDWDRS+RE R+REEKD
Sbjct: 544 HEKGARSSAASREKERGSERDWSGNSERRHRDEREQDWDRSEREHREPRYREEKDSYRDH 603
Query: 736 XXXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDVHGSRSRDADYGK 605
E DWDRGQ M E+ H SRSRD DYGK
Sbjct: 604 RPRERDLGYEDDWDRGQSSSRPRSRSRAMPEEDHRSRSRDVDYGK 648
>ref|XP_023904094.1| cleavage and polyadenylation specificity factor subunit 6 isoform X1
[Quercus suber]
Length = 658
Score = 264 bits (675), Expect = 6e-78
Identities = 141/225 (62%), Positives = 156/225 (69%), Gaps = 9/225 (4%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MM+PQ MMG GFDPTYMGRGG YG F GPAF GM+P F AVN +GL+GVAPH+NPAFFGR
Sbjct: 427 MMNPQGMMGTGFDPTYMGRGGGYGGFPGPAFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 486
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 905
GM ANGMG+MGS GM+ EEHGR TRESSYGGDDGASEYGYGE N
Sbjct: 487 GMPANGMGMMGSAGMDGHHAGMWNDTSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEGN 546
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 737
HE+G S ASREKERGSERD+SG SERR+RD++EQDWDRS+RE R+REEKD
Sbjct: 547 HEKGARSSAASREKERGSERDWSGNSERRHRDEREQDWDRSEREHREPRYREEKDSYRDH 606
Query: 736 XXXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDVHGSRSRDADYGK 605
E DWDRGQ M E+ H SRSRD DYGK
Sbjct: 607 RPRERDLGYEDDWDRGQSSSRPRSRSRAMPEEDHRSRSRDVDYGK 651
>gb|POE45696.1| cleavage and polyadenylation specificity factor subunit [Quercus
suber]
Length = 670
Score = 264 bits (675), Expect = 8e-78
Identities = 141/225 (62%), Positives = 156/225 (69%), Gaps = 9/225 (4%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MM+PQ MMG GFDPTYMGRGG YG F GPAF GM+P F AVN +GL+GVAPH+NPAFFGR
Sbjct: 439 MMNPQGMMGTGFDPTYMGRGGGYGGFPGPAFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 498
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 905
GM ANGMG+MGS GM+ EEHGR TRESSYGGDDGASEYGYGE N
Sbjct: 499 GMPANGMGMMGSAGMDGHHAGMWNDTSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEGN 558
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 737
HE+G S ASREKERGSERD+SG SERR+RD++EQDWDRS+RE R+REEKD
Sbjct: 559 HEKGARSSAASREKERGSERDWSGNSERRHRDEREQDWDRSEREHREPRYREEKDSYRDH 618
Query: 736 XXXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDVHGSRSRDADYGK 605
E DWDRGQ M E+ H SRSRD DYGK
Sbjct: 619 RPRERDLGYEDDWDRGQSSSRPRSRSRAMPEEDHRSRSRDVDYGK 663
>ref|XP_021818512.1| cleavage and polyadenylation specificity factor subunit 6 isoform X1
[Prunus avium]
ref|XP_021818513.1| cleavage and polyadenylation specificity factor subunit 6 isoform X2
[Prunus avium]
Length = 660
Score = 260 bits (665), Expect = 2e-76
Identities = 138/226 (61%), Positives = 155/226 (68%), Gaps = 10/226 (4%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MM+PQ MMGAGFDPTYMGRGG YG F GPAF GM+ F AVN +GL+GVAPH+NPAFFGR
Sbjct: 428 MMNPQGMMGAGFDPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGR 487
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 905
GM+ NGMG+MGS+GM+ EEHGR TRESSYGGDDGASEYGYGE N
Sbjct: 488 GMATNGMGMMGSSGMDGHHAGMWNDPSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEAN 547
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRERHR-----EEKDGXXX 740
HE+GG + SRE+ERGSERD+SG SERR+RD++EQDWDRS+R HR EEKD
Sbjct: 548 HEKGGRSNAPSRERERGSERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRD 607
Query: 739 XXXXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDVHGSRSRDADYGK 605
E DWDRGQ M ED H SRSRD DYGK
Sbjct: 608 HRQRERDVGYEDDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGK 653
>ref|XP_020426099.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
persica]
ref|XP_020426104.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
persica]
ref|XP_020426109.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
persica]
gb|ONI30252.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30253.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30254.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30255.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30256.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30257.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
Length = 660
Score = 259 bits (662), Expect = 5e-76
Identities = 137/226 (60%), Positives = 155/226 (68%), Gaps = 10/226 (4%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MM+PQ MMGAGFDPTYMGRGG YG F GPAF GM+ F AVN +GL+GVAPH+NPAFFGR
Sbjct: 428 MMNPQGMMGAGFDPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGR 487
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 905
GM+ NGMG+MGS+GM+ +EHGR TRESSYGGDDGASEYGYGE N
Sbjct: 488 GMATNGMGMMGSSGMDGHHAGMWNDPSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEAN 547
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRERHR-----EEKDGXXX 740
HE+GG + SRE+ERGSERD+SG SERR+RD++EQDWDRS+R HR EEKD
Sbjct: 548 HEKGGRSNAPSRERERGSERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRD 607
Query: 739 XXXXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDVHGSRSRDADYGK 605
E DWDRGQ M ED H SRSRD DYGK
Sbjct: 608 HRQRERDVGYEDDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGK 653
>ref|XP_018820439.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Juglans regia]
ref|XP_018820440.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Juglans regia]
ref|XP_018820442.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Juglans regia]
Length = 652
Score = 258 bits (660), Expect = 9e-76
Identities = 138/225 (61%), Positives = 155/225 (68%), Gaps = 9/225 (4%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MM PQ MMG+GFDPTYMGRGG YG F GPAF GM+P F AVN +GL+GVAPH+NPAFFGR
Sbjct: 421 MMTPQGMMGSGFDPTYMGRGGGYGGFPGPAFPGMIPSFPAVNTMGLAGVAPHVNPAFFGR 480
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 905
GM+ NGMG+MG+ GME EEHGR TRESSYGGDDGASEYGYG+ N
Sbjct: 481 GMATNGMGMMGAAGMEGHHAGMWNETNMGGWGGEEHGRRTRESSYGGDDGASEYGYGDAN 540
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 737
HE+G S ASREKERGSERD+SG+SERR RDD+EQDWDR +RE R+REEKD
Sbjct: 541 HEKGVRSSAASREKERGSERDWSGSSERRPRDDREQDWDRPEREHRDRRYREEKDNYRDH 600
Query: 736 XXXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDVHGSRSRDADYGK 605
E DWDRGQ + E+ H SRSRD DYGK
Sbjct: 601 RQRERDVGYEDDWDRGQSSSRPRSRSRAIPEEDHKSRSRDGDYGK 645
>dbj|GAV59792.1| RRM_1 domain-containing protein [Cephalotus follicularis]
Length = 658
Score = 258 bits (660), Expect = 1e-75
Identities = 136/225 (60%), Positives = 158/225 (70%), Gaps = 9/225 (4%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MMHPQNMMG GFDPTYMGRGG YG F+GP F GM+P F AVNA+G +GVAPH+NPAFFGR
Sbjct: 427 MMHPQNMMGGGFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGFAGVAPHVNPAFFGR 486
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 905
GM+ANGMG+MGS+GM+ EEHGR TRESSYGGDDGASEYGYGE N
Sbjct: 487 GMAANGMGMMGSSGMDGPHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEAN 546
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 737
+E+G S AS+EKER SERD+SGT+ERR+R+++ QDWDRS+RE R+REEKD
Sbjct: 547 NEKGARSSGASQEKERVSERDWSGTTERRHREERVQDWDRSEREQREHRYREEKDSYRDH 606
Query: 736 XXXXXXXDNEVDWDRG-QXXXXXXXXSYMQEDVHGSRSRDADYGK 605
E DWDRG + E+ H SRSRDADYGK
Sbjct: 607 RQRERDSGYEDDWDRGHSSSRSRSRSRAVPEEEHRSRSRDADYGK 651
>ref|XP_008805116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Phoenix dactylifera]
Length = 630
Score = 256 bits (653), Expect = 6e-75
Identities = 139/221 (62%), Positives = 159/221 (71%), Gaps = 5/221 (2%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MMHPQ MMGA FDPTYMG GGPYG F+GPAF GMMPPFQAV++VGL GVAPH+NPAFFGR
Sbjct: 404 MMHPQGMMGAAFDPTYMGGGGPYGGFSGPAFPGMMPPFQAVSSVGLPGVAPHVNPAFFGR 463
Query: 1075 GMSANGMGVMGSTGME--VQXXXXXXXXXXXXGEEHG-RTRESSYGGDDGASEYGYGEVN 905
GMS N MG+MG GME GE+HG RTRESSYGGDD A++YGYGEVN
Sbjct: 464 GMSGNAMGMMGGNGMEGHSAGMWTDMGIGGWTGEDHGRRTRESSYGGDDVAADYGYGEVN 523
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRERHREEKDGXXXXXXXX 725
+ER RSNASREKERGSERD+SG+SERR RD++E++ DRSD+ER+REEKD
Sbjct: 524 NER-VERSNASREKERGSERDWSGSSERRYRDEREKERDRSDKERYREEKDRYMDHRQRD 582
Query: 724 XXXDNEVDWDRG-QXXXXXXXXSYMQEDVHGSRSRDADYGK 605
DNE DWD G +QE+ + S SRDADYGK
Sbjct: 583 RDWDNEGDWDGGHSSSRSRNKSRTVQEEYYRSHSRDADYGK 623
>ref|XP_010929959.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Elaeis guineensis]
Length = 630
Score = 253 bits (646), Expect = 6e-74
Identities = 139/221 (62%), Positives = 159/221 (71%), Gaps = 5/221 (2%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MMHPQ MMGA FDPTYMG GGP+G F+GPAF GMMPPFQAV++VGL GVAPH+NPAFFGR
Sbjct: 404 MMHPQGMMGAAFDPTYMGGGGPFGGFSGPAFPGMMPPFQAVSSVGLPGVAPHVNPAFFGR 463
Query: 1075 GMSANGMGVMGSTGMEVQ--XXXXXXXXXXXXGEEHG-RTRESSYGGDDGASEYGYGEVN 905
GMS N MG+MGS GME GE+HG RT ESSYGGDD A++YGYGEVN
Sbjct: 464 GMSGNAMGMMGSNGMEGHSVGMWTDTGMAGWTGEDHGRRTGESSYGGDDVAADYGYGEVN 523
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRERHREEKDGXXXXXXXX 725
+E+ GRSNASREKERGSERD+SG+SERR RD++E++ DRSDRER+REEKD
Sbjct: 524 NEK-VGRSNASREKERGSERDWSGSSERRYRDEREKERDRSDRERYREEKDRYRDQRQRD 582
Query: 724 XXXDNEVDWDRGQXXXXXXXXSYM-QEDVHGSRSRDADYGK 605
DNE DWD G S M E+ + S SRD DYGK
Sbjct: 583 RDWDNESDWDGGHSSSRSRNKSRMVPEEHYRSHSRDPDYGK 623
>ref|XP_021746718.1| cleavage and polyadenylation specificity factor subunit 6-like
[Chenopodium quinoa]
Length = 633
Score = 253 bits (645), Expect = 9e-74
Identities = 135/222 (60%), Positives = 153/222 (68%), Gaps = 6/222 (2%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MMHPQ MMG GFDP+YMGRG YG F+GPAF GMMPPF +VN +G+SGVAPH+NPAFFGR
Sbjct: 405 MMHPQAMMGPGFDPSYMGRGAGYGGFSGPAFPGMMPPFPSVNPMGMSGVAPHVNPAFFGR 464
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHG-RTRESSYGGDDGASEYGYGEVN 905
GM+ NGMG+MGSTGME EEHG +TRESSYGGDDGAS+Y YGE N
Sbjct: 465 GMTPNGMGMMGSTGMEGHPGGMWSDPGMGGWAGEEHGQKTRESSYGGDDGASDYRYGEEN 524
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE-RHREEKDGXXXXXXX 728
E+ + A REKER SERD+SG SERR RD++EQD+DRSDRE RHRE+KDG
Sbjct: 525 PEKSSRTNAAPREKERASERDWSGNSERRYRDEREQDYDRSDRERRHREDKDGYRDHRRK 584
Query: 727 XXXXDNEVDWDRGQ-XXXXXXXXSYMQEDVHGSRSRDADYGK 605
E DWDRGQ + ED H SRSRD DYGK
Sbjct: 585 ERDSGYEDDWDRGQSSSRSRSRSRAIPEDGHRSRSRDVDYGK 626
>dbj|GAY43962.1| hypothetical protein CUMW_078620 [Citrus unshiu]
Length = 655
Score = 253 bits (646), Expect = 1e-73
Identities = 132/225 (58%), Positives = 159/225 (70%), Gaps = 9/225 (4%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MMHPQNMMG GFDPTYMGRGG YG F+GP F GM+P F AVNA+GL+GVAPH+NPAFF R
Sbjct: 425 MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 483
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 905
GM+ANGMG+MGS+GM+ EEHGR TRESSYGGDDGAS+YGYGE N
Sbjct: 484 GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEAN 543
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 737
HE+G + ASREK+RGSERD+SG ++RR+R+++EQDWDRS+R+ RHREEKD
Sbjct: 544 HEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDR 603
Query: 736 XXXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDVHGSRSRDADYGK 605
+ +WDRGQ + ++ H SRSRD DYGK
Sbjct: 604 RQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGK 648
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Citrus sinensis]
Length = 655
Score = 253 bits (646), Expect = 1e-73
Identities = 132/225 (58%), Positives = 159/225 (70%), Gaps = 9/225 (4%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MMHPQNMMG GFDPTYMGRGG YG F+GP F GM+P F AVNA+GL+GVAPH+NPAFF R
Sbjct: 425 MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 483
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 905
GM+ANGMG+MGS+GM+ EEHGR TRESSYGGDDGAS+YGYGE N
Sbjct: 484 GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEAN 543
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 737
HE+G + ASREK+RGSERD+SG ++RR+R+++EQDWDRS+R+ RHREEKD
Sbjct: 544 HEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDR 603
Query: 736 XXXXXXXDNEVDWDRGQ-XXXXXXXXSYMQEDVHGSRSRDADYGK 605
+ +WDRGQ + ++ H SRSRD DYGK
Sbjct: 604 RQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGK 648
>ref|XP_021901218.1| cleavage and polyadenylation specificity factor subunit CG7185
[Carica papaya]
Length = 636
Score = 252 bits (643), Expect = 2e-73
Identities = 130/222 (58%), Positives = 156/222 (70%), Gaps = 6/222 (2%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
++HPQ MMG+GFDPT+MGRGG YG F+GP+F GM+P F VNA+GL+GVAPH+NPAFFGR
Sbjct: 408 LVHPQGMMGSGFDPTFMGRGGGYGAFSGPSFPGMLPSFPGVNAMGLAGVAPHINPAFFGR 467
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGR-TRESSYGGDDGASEYGYGEVN 905
GM ANGMG+MG +GM+ EEHGR TRESSYGG+DGAS+YGYGE N
Sbjct: 468 GMGANGMGMMGPSGMDGPHAGIWTDPSMGGWGGEEHGRRTRESSYGGEDGASDYGYGEAN 527
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE-RHREEKDGXXXXXXX 728
HE+GG S ASREKER SERD+SG+++RR+ D++ QDWDRS+RE R+R EKD
Sbjct: 528 HEKGGRSSAASREKERASERDWSGSNDRRHHDERGQDWDRSEREHRYRGEKDSYHDHRQR 587
Query: 727 XXXXDNEVDWDRGQ-XXXXXXXXSYMQEDVHGSRSRDADYGK 605
E DWDRGQ M ED H SRSR+ DYGK
Sbjct: 588 ERDSAYEDDWDRGQTSSRSRSRSRTMPEDDHKSRSREGDYGK 629
>ref|XP_015894525.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Ziziphus jujuba]
Length = 659
Score = 252 bits (644), Expect = 2e-73
Identities = 136/226 (60%), Positives = 160/226 (70%), Gaps = 10/226 (4%)
Frame = -2
Query: 1252 MMHPQNMMGAGFDPTYMGRGGPYG-FTGPAFTGMMPPFQAVNAVGLSGVAPHLNPAFFGR 1076
MM+PQ MMG+GFDPTYMGRGG YG F GPAF GM+P F AVN +GL+GVAPH+NPAFFGR
Sbjct: 427 MMNPQGMMGSGFDPTYMGRGGGYGGFPGPAFHGMLPSFPAVNTMGLAGVAPHVNPAFFGR 486
Query: 1075 GMSANGMGVMGSTGMEVQXXXXXXXXXXXXG--EEHGRT-RESSYGGDDGASEYGYGEVN 905
GM++NGMG+MGS+ M+ EEHGR RESSYGGDDGASEYGYGE +
Sbjct: 487 GMASNGMGMMGSSLMDGHHAGMWTDPSMGGWSGEEHGRRMRESSYGGDDGASEYGYGEAD 546
Query: 904 HERGGGRSNASREKERGSERDYSGTSERRNRDDKEQDWDRSDRE----RHREEKDGXXXX 737
E+G S ASRE+ERGSERD+SG SERR+RD+++QDWDRS++E R+REEKDG
Sbjct: 547 QEKGVRSSAASRERERGSERDWSGNSERRHRDERDQDWDRSEKEHREHRYREEKDGHRDH 606
Query: 736 XXXXXXXDNEVDWDRGQXXXXXXXXSYM--QEDVHGSRSRDADYGK 605
D E DWDRGQ S + +ED H SRSRD DYGK
Sbjct: 607 RQRERDLDYEDDWDRGQPSSRPRSRSRVMPEEDHHRSRSRDLDYGK 652