BLASTX nr result

ID: Ophiopogon23_contig00023402 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00023402
         (448 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EFZ21182.1| hypothetical protein SINV_08535, partial [Solenop...    52   3e-06
ref|XP_011647682.1| PREDICTED: single-pass membrane and coiled-c...    52   5e-06
gb|KYN00928.1| hypothetical protein ALC62_08154, partial [Cyphom...    51   6e-06
ref|XP_019882439.1| PREDICTED: single-pass membrane and coiled-c...    51   8e-06

>gb|EFZ21182.1| hypothetical protein SINV_08535, partial [Solenopsis invicta]
          Length = 59

 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = +2

Query: 173 IFTIVLPTVVTMFLLIAAYVYFKTRPKSIEY 265
           +FT+VLPTV  MF++IAAYVY KTRPK +EY
Sbjct: 29  VFTVVLPTVAAMFVIIAAYVYVKTRPKLLEY 59


>ref|XP_011647682.1| PREDICTED: single-pass membrane and coiled-coil domain-containing
           protein 4 homolog [Pogonomyrmex barbatus]
          Length = 66

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = +2

Query: 173 IFTIVLPTVVTMFLLIAAYVYFKTRPKSIEY 265
           +FT+VLPTV  +F++IAAYVY KTRPK IEY
Sbjct: 36  VFTVVLPTVAAIFVIIAAYVYIKTRPKLIEY 66


>gb|KYN00928.1| hypothetical protein ALC62_08154, partial [Cyphomyrmex costatus]
          Length = 60

 Score = 51.2 bits (121), Expect = 6e-06
 Identities = 20/31 (64%), Positives = 28/31 (90%)
 Frame = +2

Query: 173 IFTIVLPTVVTMFLLIAAYVYFKTRPKSIEY 265
           +FT+VLPT+  +F++IAAY+YFKTRPK +EY
Sbjct: 30  VFTVVLPTMAAIFVIIAAYIYFKTRPKLMEY 60


>ref|XP_019882439.1| PREDICTED: single-pass membrane and coiled-coil domain-containing
           protein 4 homolog [Camponotus floridanus]
 ref|XP_019882440.1| PREDICTED: single-pass membrane and coiled-coil domain-containing
           protein 4 homolog [Camponotus floridanus]
 ref|XP_019882441.1| PREDICTED: single-pass membrane and coiled-coil domain-containing
           protein 4 homolog [Camponotus floridanus]
          Length = 59

 Score = 50.8 bits (120), Expect = 8e-06
 Identities = 21/31 (67%), Positives = 27/31 (87%)
 Frame = +2

Query: 173 IFTIVLPTVVTMFLLIAAYVYFKTRPKSIEY 265
           +FTIVLPT+  +F++IAAY+Y KTRPK IEY
Sbjct: 29  VFTIVLPTIAAIFVIIAAYIYVKTRPKLIEY 59


Top