BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00022441
         (1939 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020261495.1| DNA repair protein recA homolog 3, mitochond...   615   0.0  
ref|XP_020104766.1| DNA repair protein recA homolog 3, mitochond...   573   0.0  
ref|XP_010250454.1| PREDICTED: DNA repair protein recA homolog 3...   551   0.0  
gb|OVA09719.1| AAA+ ATPase domain [Macleaya cordata]                  547   0.0  
gb|EOY30426.1| RecA DNA recombination family protein [Theobroma ...   545   0.0  
ref|XP_017983961.1| PREDICTED: DNA repair protein recA homolog 3...   545   0.0  
ref|XP_010909692.1| PREDICTED: DNA repair protein recA homolog 3...   543   0.0  
gb|KJB83056.1| hypothetical protein B456_013G227300 [Gossypium r...   541   0.0  
ref|XP_012464696.1| PREDICTED: DNA repair protein recA homolog 3...   541   0.0  
ref|XP_021275835.1| DNA repair protein recA homolog 3, mitochond...   541   0.0  
ref|XP_017620047.1| PREDICTED: DNA repair protein recA homolog 3...   540   0.0  
ref|XP_016719532.1| PREDICTED: DNA repair protein recA homolog 3...   539   0.0  
ref|XP_017218404.1| PREDICTED: DNA repair protein recA homolog 3...   536   0.0  
ref|XP_023914409.1| DNA repair protein recA homolog 3, mitochond...   536   0.0  
gb|POF08220.1| dna repair protein reca like 3, mitochondrial [Qu...   537   0.0  
gb|OAY73885.1| DNA repair protein recA, mitochondrial [Ananas co...   534   0.0  
ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3...   535   0.0  
ref|XP_011077996.1| DNA repair protein recA homolog 3, mitochond...   535   0.0  
ref|XP_004970942.1| DNA repair protein recA homolog 3, mitochond...   533   0.0  
ref|XP_022732650.1| DNA repair protein recA homolog 3, mitochond...   533   0.0  

>ref|XP_020261495.1| DNA repair protein recA homolog 3, mitochondrial [Asparagus
            officinalis]
 gb|ONK72439.1| uncharacterized protein A4U43_C04F19440 [Asparagus officinalis]
          Length = 419

 Score =  615 bits (1587), Expect = 0.0
 Identities = 316/401 (78%), Positives = 342/401 (85%)
 Frame = +2

Query: 179  MARLLRSVCLRRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVA 358
            MARLLRSV L R LLSPE CRQGI+GS S  RNFSAK ++            N+SKKDVA
Sbjct: 1    MARLLRSVLLNRALLSPENCRQGIVGSASHARNFSAKGRKKSKSDGSESGEENLSKKDVA 60

Query: 359  LHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPE 538
            LHQALDQIQASFGKGAIMWLGRSN PREVPVISTGSF+LDIALGIGGLPKGRVVEIYGPE
Sbjct: 61   LHQALDQIQASFGKGAIMWLGRSNVPREVPVISTGSFSLDIALGIGGLPKGRVVEIYGPE 120

Query: 539  ASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALSL 718
            ASGKTTLALHVIAE+QKNGGYCAFVDAEHALDPALAESIGVKT++LLLSQPDCGEQALSL
Sbjct: 121  ASGKTTLALHVIAESQKNGGYCAFVDAEHALDPALAESIGVKTDDLLLSQPDCGEQALSL 180

Query: 719  VDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTI 898
            VDTLIRSG            LVPKSELEGEMGDAHMALQARLMSQALRKLSHSLS+SQTI
Sbjct: 181  VDTLIRSGSIDVVVVDSVAALVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSLSQTI 240

Query: 899  LLFINQVRSKLQTFGFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKV 1078
            L+FINQVRSKLQTFGFGGPTEVTSGGNALKFYSSVRLNIKRIG VKKGEET+GSQ+LVK+
Sbjct: 241  LVFINQVRSKLQTFGFGGPTEVTSGGNALKFYSSVRLNIKRIGLVKKGEETVGSQVLVKI 300

Query: 1079 VKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMKR 1258
            VKNKHAPPFKTAQFELEFGKGI+R+SEII+LGCKHKFI+RSGA+Y+ N +TF GK+A+KR
Sbjct: 301  VKNKHAPPFKTAQFELEFGKGISRDSEIIELGCKHKFITRSGAFYTLNGQTFRGKEAIKR 360

Query: 1259 YFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAPDGDVQ 1381
            YFAE+               I +E +KK  SE+E P  DVQ
Sbjct: 361  YFAENREAQEELTMKLREKLIHTETQKKSSSESEVPGEDVQ 401


>ref|XP_020104766.1| DNA repair protein recA homolog 3, mitochondrial isoform X1 [Ananas
            comosus]
          Length = 421

 Score =  573 bits (1477), Expect = 0.0
 Identities = 296/399 (74%), Positives = 334/399 (83%), Gaps = 2/399 (0%)
 Frame = +2

Query: 179  MARLLRSVCLRRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVA 358
            MARLLR+  ++R L SPE  RQGI GS+  FR+FS K +R            N+SKKD+A
Sbjct: 1    MARLLRNTYVKRALFSPEGYRQGICGSSFHFRSFSTKGRRKSRSDGTDSCEENLSKKDLA 60

Query: 359  LHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPE 538
            LHQALDQI ASFGKGAIMWLGRS+ PREVPV+STGSFALD+ALGIGGLPKGRVVE+YGPE
Sbjct: 61   LHQALDQITASFGKGAIMWLGRSHGPREVPVVSTGSFALDMALGIGGLPKGRVVEVYGPE 120

Query: 539  ASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALSL 718
            ASGKTTLALHVIAEAQK GGYCAFVDAEHALDPALAESIGVKT+NLLLSQPDCGEQALSL
Sbjct: 121  ASGKTTLALHVIAEAQKYGGYCAFVDAEHALDPALAESIGVKTDNLLLSQPDCGEQALSL 180

Query: 719  VDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTI 898
            VDTLIRSG            LVPKSEL+GEMGDAH+ALQARLMSQALRKLSHSLS+SQTI
Sbjct: 181  VDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHVALQARLMSQALRKLSHSLSLSQTI 240

Query: 899  LLFINQVRSKLQTF-GFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVK 1075
            LLFINQVRSK+ TF GFGGPTEVTSGGNALKFY+SVRLNIKRIG VKKGEET+GSQ+LVK
Sbjct: 241  LLFINQVRSKVSTFGGFGGPTEVTSGGNALKFYASVRLNIKRIGLVKKGEETVGSQVLVK 300

Query: 1076 VVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRS-GAYYSFNDETFHGKDAM 1252
            +VKNKHAPPFKTAQFELEFGKGI R+SEIIDLG K+KFI+++ GA+Y+FN ++F GKDA+
Sbjct: 301  IVKNKHAPPFKTAQFELEFGKGICRDSEIIDLGLKNKFITKAGGAFYNFNGQSFRGKDAI 360

Query: 1253 KRYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAPD 1369
            KRYFAE+               ++++ EKKHDS +E  +
Sbjct: 361  KRYFAENEGVRDEVMTKLKEKLMQNDTEKKHDSGSETAE 399


>ref|XP_010250454.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial [Nelumbo
            nucifera]
          Length = 425

 Score =  551 bits (1421), Expect = 0.0
 Identities = 292/404 (72%), Positives = 327/404 (80%), Gaps = 5/404 (1%)
 Frame = +2

Query: 179  MARLLRSV-CLRRTLLSPE--TCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKK 349
            MA+LLR+V  LRR+L+  E    RQGILG +SQ  NFS+K KR            N+SKK
Sbjct: 1    MAKLLRNVYTLRRSLMIAEIQNYRQGILGISSQCCNFSSKGKRKSRSDGSDSGEENISKK 60

Query: 350  DVALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIY 529
            D+AL QALDQI  SFGKGAIMWLGRS +PR VPV+STGSFALD+ALGIGGLPKGRV+EIY
Sbjct: 61   DLALQQALDQITTSFGKGAIMWLGRSVSPRHVPVVSTGSFALDMALGIGGLPKGRVIEIY 120

Query: 530  GPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQA 709
            GPEASGKTTLALHVIAE+QK+GGYC FVDAEHALDPALAE++GVKTENLLLSQPDCGEQA
Sbjct: 121  GPEASGKTTLALHVIAESQKHGGYCVFVDAEHALDPALAEAVGVKTENLLLSQPDCGEQA 180

Query: 710  LSLVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVS 889
            LSLVDTLIRSG            LVPKSEL+GEMGDAHMA+QARLMSQALRKLSHSLS+S
Sbjct: 181  LSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 240

Query: 890  QTILLFINQVRSKLQTF-GFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQI 1066
            QTIL+FINQVRSKL TF GFGGP EVTSGGNALKFY+SVRLNIKR G VKKGEETIGSQ+
Sbjct: 241  QTILIFINQVRSKLSTFGGFGGPIEVTSGGNALKFYASVRLNIKRTGLVKKGEETIGSQV 300

Query: 1067 LVKVVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRS-GAYYSFNDETFHGK 1243
            LVK+VKNKHAPPFKTAQFELEFGKGI R SEII+LGCKHKFI+++ GA+Y+FN + F GK
Sbjct: 301  LVKIVKNKHAPPFKTAQFELEFGKGICRYSEIIELGCKHKFITKAGGAFYNFNGQNFRGK 360

Query: 1244 DAMKRYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAPDGD 1375
            DA+KRY +E+               +  E   + DSET  PDGD
Sbjct: 361  DAIKRYLSENEDCLEELMAKLREKLMHIETNIEKDSETGTPDGD 404


>gb|OVA09719.1| AAA+ ATPase domain [Macleaya cordata]
          Length = 422

 Score =  547 bits (1409), Expect = 0.0
 Identities = 287/401 (71%), Positives = 325/401 (81%), Gaps = 4/401 (0%)
 Frame = +2

Query: 179  MARLLRSVC-LRRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDV 355
            MAR LR+   LRR+L + E  RQGIL +++QF NFS+K KR            N+SKKD+
Sbjct: 1    MARFLRTASSLRRSLFAAEEQRQGILRTSTQFCNFSSKGKRKSKSDGSESGEENLSKKDL 60

Query: 356  ALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGP 535
            AL QALDQI  SFGKGAIMWLGR+ +PR +PV+STGSFALD+ALGIGGLPKGRVVEIYGP
Sbjct: 61   ALQQALDQITTSFGKGAIMWLGRTASPRHIPVVSTGSFALDMALGIGGLPKGRVVEIYGP 120

Query: 536  EASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALS 715
            EASGKTTLALHVIAEAQK+GGYC FVDAEHALDPALAE+IGV TENLLLSQPD GEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKHGGYCVFVDAEHALDPALAEAIGVNTENLLLSQPDSGEQALS 180

Query: 716  LVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQT 895
            LVDTLIRSG            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQT
Sbjct: 181  LVDTLIRSGSVNVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 896  ILLFINQVRSKLQTF-GFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILV 1072
            IL+FINQVRSKL TF GFGGP EVTSGGNALKFY+SVRLNIKRIG VKKGEET+GSQ+LV
Sbjct: 241  ILIFINQVRSKLSTFGGFGGPQEVTSGGNALKFYASVRLNIKRIGLVKKGEETVGSQVLV 300

Query: 1073 KVVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISR-SGAYYSFNDETFHGKDA 1249
            K+VKNKHAPPFKTAQFELEFGKGI RESE+I+LGCKHKFI++  GA+YSFND++F GKDA
Sbjct: 301  KIVKNKHAPPFKTAQFELEFGKGICRESELIELGCKHKFITKLGGAFYSFNDQSFRGKDA 360

Query: 1250 MKRYFAESXXXXXXXXXXXXXXXIRSEIEK-KHDSETEAPD 1369
            +K+Y A++                 +E +K K  SET+  D
Sbjct: 361  IKKYLAQNVDIREELMGKLREKLTHTETDKAKESSETQEED 401


>gb|EOY30426.1| RecA DNA recombination family protein [Theobroma cacao]
          Length = 420

 Score =  545 bits (1404), Expect = 0.0
 Identities = 280/401 (69%), Positives = 326/401 (81%), Gaps = 2/401 (0%)
 Frame = +2

Query: 179  MARLLRSVC-LRRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDV 355
            MAR LR++  L+R+L++PE CR+G+LGS+SQ  +FS+K +R            NMSKK++
Sbjct: 1    MARFLRNISSLKRSLIAPEVCRRGVLGSSSQLCSFSSKGRRKSKSDGSDSCDENMSKKEL 60

Query: 356  ALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGP 535
            AL QALDQI +SFGKG+IMWLGRS +P++VPV+STGSFALDIALG GGLPKGRVVEIYGP
Sbjct: 61   ALKQALDQITSSFGKGSIMWLGRSVSPKDVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 120

Query: 536  EASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALS 715
            EASGKTTLALHVIAEAQK GGYC FVDAEHALD ALAE+IGV TENLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSALAEAIGVNTENLLLSQPDCGEQALS 180

Query: 716  LVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQT 895
            LVDTLIRSG            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 896  ILLFINQVRSKLQTF-GFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILV 1072
            IL+F+NQVRSKL TF GFGGPTEVT GGNALKFY+SVRLNI+R G VKKGEETIGSQ+LV
Sbjct: 241  ILIFVNQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLV 300

Query: 1073 KVVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAM 1252
            K+VKNK APPFKTAQFELEFG+GI+RE EIIDL  KHKF+++SGA+YSFND+  HGK+A 
Sbjct: 301  KIVKNKLAPPFKTAQFELEFGRGISREGEIIDLALKHKFVTKSGAFYSFNDKKIHGKEAF 360

Query: 1253 KRYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAPDGD 1375
            K++ AE+               +  E E+K + +T+  DGD
Sbjct: 361  KKFLAENESACEELVMKLREKLL--EAERKKERQTDISDGD 399


>ref|XP_017983961.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial
            [Theobroma cacao]
          Length = 420

 Score =  545 bits (1403), Expect = 0.0
 Identities = 280/401 (69%), Positives = 326/401 (81%), Gaps = 2/401 (0%)
 Frame = +2

Query: 179  MARLLRSVC-LRRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDV 355
            MAR LR++  L+R+L++PE CR+G+LGS+SQ  +FS+K +R            NMSKK++
Sbjct: 1    MARFLRNISSLKRSLVAPEVCRRGVLGSSSQLCSFSSKGRRKSKSDGSDSCDENMSKKEL 60

Query: 356  ALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGP 535
            AL QALDQI +SFGKG+IMWLGRS +P++VPV+STGSFALDIALG GGLPKGRVVEIYGP
Sbjct: 61   ALKQALDQITSSFGKGSIMWLGRSVSPKDVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 120

Query: 536  EASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALS 715
            EASGKTTLALHVIAEAQK GGYC FVDAEHALD ALAE+IGV TENLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSALAEAIGVNTENLLLSQPDCGEQALS 180

Query: 716  LVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQT 895
            LVDTLIRSG            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 896  ILLFINQVRSKLQTF-GFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILV 1072
            IL+F+NQVRSKL TF GFGGPTEVT GGNALKFY+SVRLNI+R G VKKGEETIGSQ+LV
Sbjct: 241  ILIFVNQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLV 300

Query: 1073 KVVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAM 1252
            K+VKNK APPFKTAQFELEFG+GI+RE EIIDL  KHKF+++SGA+YSFND+  HGK+A 
Sbjct: 301  KIVKNKLAPPFKTAQFELEFGRGISREGEIIDLALKHKFVTKSGAFYSFNDKKIHGKEAF 360

Query: 1253 KRYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAPDGD 1375
            K++ AE+               +  E E+K + +T+  DGD
Sbjct: 361  KKFLAENESACEELVMKLREKLL--EAERKKERQTDISDGD 399


>ref|XP_010909692.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial isoform
            X1 [Elaeis guineensis]
          Length = 417

 Score =  543 bits (1398), Expect = 0.0
 Identities = 281/381 (73%), Positives = 314/381 (82%), Gaps = 2/381 (0%)
 Frame = +2

Query: 239  RQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMWL 418
            RQG +GS  QF NFSA  +R            ++SKKDVAL QALDQI ASFGKGAIMWL
Sbjct: 17   RQGFVGSTFQFCNFSAGGRRKSKSDGSESSEESLSKKDVALQQALDQITASFGKGAIMWL 76

Query: 419  GRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNGG 598
            GRS++ REVPV+STGSF+LD+ALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQK GG
Sbjct: 77   GRSHSRREVPVVSTGSFSLDLALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKAGG 136

Query: 599  YCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALSLVDTLIRSGXXXXXXXXXXXX 778
            YCAFVDAEHALDP+LAE+IGVKT+NLLLSQPDCGEQALSLVDTLIRSG            
Sbjct: 137  YCAFVDAEHALDPSLAETIGVKTDNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAA 196

Query: 779  LVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTF-GFGGP 955
            LVPKSEL+GEMGDAHMALQARLMSQALRKLSHSLS+SQTIL+FINQVRSKL TF GFGGP
Sbjct: 197  LVPKSELDGEMGDAHMALQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGGFGGP 256

Query: 956  TEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFG 1135
            TEVTSGGNALKFY+SVRLNIKRIG VKKGEET+GSQ+LVK+VKNKHAPPFKT QFELEFG
Sbjct: 257  TEVTSGGNALKFYASVRLNIKRIGLVKKGEETVGSQVLVKIVKNKHAPPFKTVQFELEFG 316

Query: 1136 KGIARESEIIDLGCKHKFISR-SGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXX 1312
            KGI+R+SE+I+LGCKHKFI++  GA+YS N  +F GKDA+KRYF E+             
Sbjct: 317  KGISRDSEVIELGCKHKFITKGGGAFYSLNGHSFRGKDAIKRYFVENEGAREELMMKLKE 376

Query: 1313 XXIRSEIEKKHDSETEAPDGD 1375
              +    EKK + E++ PDGD
Sbjct: 377  KILHG-TEKKQEPESQVPDGD 396


>gb|KJB83056.1| hypothetical protein B456_013G227300 [Gossypium raimondii]
          Length = 419

 Score =  541 bits (1393), Expect = 0.0
 Identities = 275/400 (68%), Positives = 318/400 (79%), Gaps = 1/400 (0%)
 Frame = +2

Query: 179  MARLLRSVC-LRRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDV 355
            MAR LR++  L+ +  +P+ CR G+LGS SQ  NFS+K +R            NMSKKD+
Sbjct: 1    MARFLRNISHLKHSFHAPQICRGGVLGSYSQLCNFSSKGRRKSKSDGSDSGEENMSKKDL 60

Query: 356  ALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGP 535
            AL QALDQI +SFGKG+IMWLGRS +PR VPV+STGSFALD+ALGIGGLPKGRVVEIYGP
Sbjct: 61   ALKQALDQITSSFGKGSIMWLGRSESPRNVPVVSTGSFALDVALGIGGLPKGRVVEIYGP 120

Query: 536  EASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALS 715
            EASGKTTLALHVIAEAQK GGYC FVDAEHALDPALAE+IGV TENLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAETIGVNTENLLLSQPDCGEQALS 180

Query: 716  LVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQT 895
            LVDTLIRSG            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVTALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 896  ILLFINQVRSKLQTFGFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVK 1075
            IL+FINQVRSKL TFGFGGPTEVT GGNALKFY+SVRLNI+R G VKKGEETIGSQ+LVK
Sbjct: 241  ILIFINQVRSKLSTFGFGGPTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVK 300

Query: 1076 VVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMK 1255
            VVKNKHAPPFK A+FELEFGKGI RE EII+L  KHKF++++G++Y+FND+  HGK+A K
Sbjct: 301  VVKNKHAPPFKNAEFELEFGKGICREGEIINLATKHKFVTKAGSFYTFNDQKIHGKEAFK 360

Query: 1256 RYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAPDGD 1375
             +  ++               +  E+E + + + +  DGD
Sbjct: 361  NFLVQNESAREELATKLREKLL--EVENEKERQGDISDGD 398


>ref|XP_012464696.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Gossypium raimondii]
 gb|KJB83055.1| hypothetical protein B456_013G227300 [Gossypium raimondii]
          Length = 419

 Score =  541 bits (1393), Expect = 0.0
 Identities = 275/400 (68%), Positives = 318/400 (79%), Gaps = 1/400 (0%)
 Frame = +2

Query: 179  MARLLRSVC-LRRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDV 355
            MAR LR++  L+ +  +P+ CR G+LGS SQ  NFS+K +R            NMSKKD+
Sbjct: 1    MARFLRNISHLKHSFHAPQICRGGVLGSYSQLCNFSSKGRRKSKSDGSDSGEENMSKKDL 60

Query: 356  ALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGP 535
            AL QALDQI +SFGKG+IMWLGRS +PR VPV+STGSFALD+ALGIGGLPKGRVVEIYGP
Sbjct: 61   ALKQALDQITSSFGKGSIMWLGRSESPRNVPVVSTGSFALDVALGIGGLPKGRVVEIYGP 120

Query: 536  EASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALS 715
            EASGKTTLALHVIAEAQK GGYC FVDAEHALDPALAE+IGV TENLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAETIGVNTENLLLSQPDCGEQALS 180

Query: 716  LVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQT 895
            LVDTLIRSG            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 896  ILLFINQVRSKLQTFGFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVK 1075
            IL+FINQVRSKL TFGFGGPTEVT GGNALKFY+SVRLNI+R G VKKGEETIGSQ+LVK
Sbjct: 241  ILIFINQVRSKLSTFGFGGPTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVK 300

Query: 1076 VVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMK 1255
            VVKNKHAPPFK A+FELEFGKGI RE EII+L  KHKF++++G++Y+FND+  HGK+A K
Sbjct: 301  VVKNKHAPPFKNAEFELEFGKGICREGEIINLATKHKFVTKAGSFYTFNDQKIHGKEAFK 360

Query: 1256 RYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAPDGD 1375
             +  ++               +  E+E + + + +  DGD
Sbjct: 361  NFLVQNESAREELATKLREKLL--EVENEKERQGDISDGD 398


>ref|XP_021275835.1| DNA repair protein recA homolog 3, mitochondrial [Herrania umbratica]
 ref|XP_021275836.1| DNA repair protein recA homolog 3, mitochondrial [Herrania umbratica]
          Length = 420

 Score =  541 bits (1393), Expect = 0.0
 Identities = 279/401 (69%), Positives = 323/401 (80%), Gaps = 2/401 (0%)
 Frame = +2

Query: 179  MARLLRSVC-LRRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDV 355
            MAR LR++  L+R+L +PE CR+G+LGS+SQ   FS+K +R            NMSKK++
Sbjct: 1    MARFLRNISSLKRSLFAPEVCRRGVLGSSSQLCAFSSKGRRKSKSDGSDSCDENMSKKEL 60

Query: 356  ALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGP 535
            AL QALDQI +SFGKG+IMWLGRS +P++VPV+STGSFALDIALG GGLPKGRVVEIYGP
Sbjct: 61   ALKQALDQITSSFGKGSIMWLGRSVSPKDVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 120

Query: 536  EASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALS 715
            EASGKTTLALHVIAEAQK GGYC FVDAEHALD ALAE+IGV TENLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSALAEAIGVNTENLLLSQPDCGEQALS 180

Query: 716  LVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQT 895
            LVDTLIRSG            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 896  ILLFINQVRSKLQTF-GFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILV 1072
            IL+F+NQVRSKL TF GFGGPTEVT GGNALKFY+SVRLNI+R G VKKGEETIGSQ+LV
Sbjct: 241  ILIFVNQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLV 300

Query: 1073 KVVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAM 1252
            K+VKNK APPFKTAQFELEFG+GI+RE EIIDL  KHKF+++SGA+YSFND   HGK+A 
Sbjct: 301  KIVKNKLAPPFKTAQFELEFGRGISREGEIIDLALKHKFVTKSGAFYSFNDHKIHGKEAF 360

Query: 1253 KRYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAPDGD 1375
            K++ AE+               +  E E+K + +T+  DG+
Sbjct: 361  KKFLAENESACEELVMKLREKLL--ETERKKERQTDISDGN 399


>ref|XP_017620047.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            isoform X1 [Gossypium arboreum]
 ref|XP_017620048.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            isoform X2 [Gossypium arboreum]
 gb|KHG09097.1| hypothetical protein F383_14543 [Gossypium arboreum]
          Length = 419

 Score =  540 bits (1390), Expect = 0.0
 Identities = 276/400 (69%), Positives = 317/400 (79%), Gaps = 1/400 (0%)
 Frame = +2

Query: 179  MARLLRSVC-LRRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDV 355
            MAR LR++  L+ +  +P+ CR G+LGS SQ  NFS+K +R            N+SKKD+
Sbjct: 1    MARFLRNISHLKHSFHAPQICRGGVLGSYSQLCNFSSKGRRKSKSDGSDSGEENISKKDL 60

Query: 356  ALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGP 535
            AL QALDQI +SFGKG+IMWLGRS +PR VPV+STGSFALD+ALGIGGLPKGRVVEIYGP
Sbjct: 61   ALKQALDQITSSFGKGSIMWLGRSESPRNVPVVSTGSFALDVALGIGGLPKGRVVEIYGP 120

Query: 536  EASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALS 715
            EASGKTTLALHVIAEAQK GGYC FVDAEHALDPALAE+IGV TENLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAETIGVNTENLLLSQPDCGEQALS 180

Query: 716  LVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQT 895
            LVDTLIRSG            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 896  ILLFINQVRSKLQTFGFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVK 1075
            IL+FINQVRSKL TFGFGGPTEVT GGNALKFY+SVRLNI+R G VKKGEETIGSQ+LVK
Sbjct: 241  ILIFINQVRSKLSTFGFGGPTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVK 300

Query: 1076 VVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMK 1255
            VVKNKHAPPFK A+FELEFGKGI RE EII+L  KHKF++++G++Y+FND+  HGK+A K
Sbjct: 301  VVKNKHAPPFKNAEFELEFGKGICREGEIINLATKHKFVTKAGSFYTFNDQKIHGKEAFK 360

Query: 1256 RYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAPDGD 1375
             +  E+               +  E E K + + +  DGD
Sbjct: 361  NFLVENESAREELATKLREKLL--EPENKKERQGDISDGD 398


>ref|XP_016719532.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Gossypium hirsutum]
          Length = 419

 Score =  539 bits (1389), Expect = 0.0
 Identities = 274/400 (68%), Positives = 317/400 (79%), Gaps = 1/400 (0%)
 Frame = +2

Query: 179  MARLLRSVC-LRRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDV 355
            MAR LR++  L+ +  +P+ CR G+LGS SQ  NFS+K +R            NMSKKD+
Sbjct: 1    MARFLRNISHLKHSFHAPQICRGGVLGSYSQLCNFSSKGRRKSKSDGSDSGEENMSKKDL 60

Query: 356  ALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGP 535
            AL QALDQI +SFGKG+IMWLGRS +PR VPV+STGSFALD+ALGIGGLPKGRVVEIYGP
Sbjct: 61   ALKQALDQITSSFGKGSIMWLGRSESPRNVPVVSTGSFALDVALGIGGLPKGRVVEIYGP 120

Query: 536  EASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALS 715
            EASGKTTLALHVIAEAQK GGYC FVDAEHALDPALAE+IGV TENLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAETIGVNTENLLLSQPDCGEQALS 180

Query: 716  LVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQT 895
            LVDTLIRSG            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 896  ILLFINQVRSKLQTFGFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVK 1075
            IL+FINQ RSKL TFGFGGPTEVT GGNALKFY+SVRLNI+R G VKKGEETIGSQ+LVK
Sbjct: 241  ILIFINQARSKLSTFGFGGPTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVK 300

Query: 1076 VVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMK 1255
            VVKNKHAPPFK A+FELEFGKGI RE EII+L  KHKF++++G++Y+FND+  HGK+A K
Sbjct: 301  VVKNKHAPPFKNAEFELEFGKGICREGEIINLATKHKFVTKAGSFYTFNDQKIHGKEAFK 360

Query: 1256 RYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAPDGD 1375
             +  ++               +  E+E + + + +  DGD
Sbjct: 361  NFLVQNESAREELATKLREKLL--EVENEKERQGDISDGD 398


>ref|XP_017218404.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Daucus carota subsp. sativus]
          Length = 416

 Score =  536 bits (1381), Expect = 0.0
 Identities = 270/395 (68%), Positives = 319/395 (80%), Gaps = 1/395 (0%)
 Frame = +2

Query: 179  MARLLRSVCL-RRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDV 355
            MARL RS  L +++LLSP+  R+G+LG++SQ RN S+K KR            N+SKKD+
Sbjct: 1    MARLFRSAALLKKSLLSPQGLREGLLGTSSQIRNLSSKGKRKCKSELSDSGEENLSKKDL 60

Query: 356  ALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGP 535
            AL QALDQI  +FGKG+IMWLGRS +P+EVPV+STGS ALDIALGIGG PKGRVVEIYGP
Sbjct: 61   ALKQALDQITTAFGKGSIMWLGRSASPKEVPVVSTGSLALDIALGIGGFPKGRVVEIYGP 120

Query: 536  EASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALS 715
            EASGKTTLALHVIAEAQK GGYC F+DAEHALDP LA+SIGV TENLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFIDAEHALDPILAKSIGVNTENLLLSQPDCGEQALS 180

Query: 716  LVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQT 895
            LVDT+IRSG            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQT
Sbjct: 181  LVDTIIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 896  ILLFINQVRSKLQTFGFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVK 1075
            IL+FINQVR+KL   GFGGPTEVT GGNALKFY+S+RLN++RIGFVKKGEE IGSQ+LVK
Sbjct: 241  ILIFINQVRAKLSITGFGGPTEVTCGGNALKFYASMRLNVRRIGFVKKGEEIIGSQVLVK 300

Query: 1076 VVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMK 1255
            +VKNKHAPPF+TAQFELE+GKGI +E+E+I+LGCK KFI++SG++Y+ N +++HGKDA+K
Sbjct: 301  IVKNKHAPPFRTAQFELEYGKGICQEAEVIELGCKLKFITKSGSFYNLNGKSYHGKDALK 360

Query: 1256 RYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETE 1360
            RY AE+                 +E +K  +  TE
Sbjct: 361  RYLAENVSVKDELMANLREKLTENEPDKDTEIHTE 395


>ref|XP_023914409.1| DNA repair protein recA homolog 3, mitochondrial isoform X2 [Quercus
            suber]
          Length = 420

 Score =  536 bits (1380), Expect = 0.0
 Identities = 281/402 (69%), Positives = 322/402 (80%), Gaps = 2/402 (0%)
 Frame = +2

Query: 179  MARLLRSVC-LRRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDV 355
            MARLLR+   L+R+L SPE  R+GILG+++QF  FS K KR            +MSKKD+
Sbjct: 1    MARLLRNASILKRSLFSPEGLRRGILGTSAQFCEFSTKGKRKSKSDGSESSDDSMSKKDL 60

Query: 356  ALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGP 535
            AL QALDQI +SFGK +IMWLG S   R VPV+STGSFALD+ALG GGLPKGRVVEIYGP
Sbjct: 61   ALQQALDQITSSFGKESIMWLGPSVNTRHVPVVSTGSFALDMALGTGGLPKGRVVEIYGP 120

Query: 536  EASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALS 715
            EASGKTTLALHVIAEAQK GGYC FVDAEHALDPALAE+IGVKTE LLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAEAIGVKTEKLLLSQPDCGEQALS 180

Query: 716  LVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQT 895
            LVDTLIRSG            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQT
Sbjct: 181  LVDTLIRSGSVDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 896  ILLFINQVRSKLQTF-GFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILV 1072
            IL+FINQVRSKL TF GFGGPTEVT GGNALKFY+SVR+NI+R G VKKGEET+GSQILV
Sbjct: 241  ILVFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRINIRRTGLVKKGEETVGSQILV 300

Query: 1073 KVVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAM 1252
            K+VKNK APPFKTAQFELEFGKGI+RE+EIIDL  KHKF+S++GA+Y +ND+ FHGKD +
Sbjct: 301  KIVKNKLAPPFKTAQFELEFGKGISRETEIIDLAVKHKFLSKAGAFYYYNDQKFHGKDVL 360

Query: 1253 KRYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAPDGDV 1378
            K++ AE+               +R+E +K  + ETE  DG++
Sbjct: 361  KKFLAENESVREELTVKLKEKLLRAETQK--EPETETVDGNL 400


>gb|POF08220.1| dna repair protein reca like 3, mitochondrial [Quercus suber]
          Length = 458

 Score =  537 bits (1383), Expect = 0.0
 Identities = 281/404 (69%), Positives = 324/404 (80%), Gaps = 2/404 (0%)
 Frame = +2

Query: 173  RAMARLLRSVC-LRRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKK 349
            ++MARLLR+   L+R+L SPE  R+GILG+++QF  FS K KR            +MSKK
Sbjct: 37   KSMARLLRNASILKRSLFSPEGLRRGILGTSAQFCEFSTKGKRKSKSDGSESSDDSMSKK 96

Query: 350  DVALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIY 529
            D+AL QALDQI +SFGK +IMWLG S   R VPV+STGSFALD+ALG GGLPKGRVVEIY
Sbjct: 97   DLALQQALDQITSSFGKESIMWLGPSVNTRHVPVVSTGSFALDMALGTGGLPKGRVVEIY 156

Query: 530  GPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQA 709
            GPEASGKTTLALHVIAEAQK GGYC FVDAEHALDPALAE+IGVKTE LLLSQPDCGEQA
Sbjct: 157  GPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAEAIGVKTEKLLLSQPDCGEQA 216

Query: 710  LSLVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVS 889
            LSLVDTLIRSG            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+S
Sbjct: 217  LSLVDTLIRSGSVDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 276

Query: 890  QTILLFINQVRSKLQTF-GFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQI 1066
            QTIL+FINQVRSKL TF GFGGPTEVT GGNALKFY+SVR+NI+R G VKKGEET+GSQI
Sbjct: 277  QTILVFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRINIRRTGLVKKGEETVGSQI 336

Query: 1067 LVKVVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKD 1246
            LVK+VKNK APPFKTAQFELEFGKGI+RE+EIIDL  KHKF+S++GA+Y +ND+ FHGKD
Sbjct: 337  LVKIVKNKLAPPFKTAQFELEFGKGISRETEIIDLAVKHKFLSKAGAFYYYNDQKFHGKD 396

Query: 1247 AMKRYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAPDGDV 1378
             +K++ AE+               +R+E +K  + ETE  DG++
Sbjct: 397  VLKKFLAENESVREELTVKLKEKLLRAETQK--EPETETVDGNL 438


>gb|OAY73885.1| DNA repair protein recA, mitochondrial [Ananas comosus]
          Length = 397

 Score =  534 bits (1375), Expect = 0.0
 Identities = 275/367 (74%), Positives = 308/367 (83%), Gaps = 2/367 (0%)
 Frame = +2

Query: 275  NFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMWLGRSNAPREVPVI 454
            N S   +R            N+SKKD+ALHQALDQI ASFGKGAIMWLGRS+ PREVPV+
Sbjct: 9    NLSLLGRRKSRSDGTDSCEENLSKKDLALHQALDQITASFGKGAIMWLGRSHGPREVPVV 68

Query: 455  STGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALD 634
            STGSFALD+ALGIGGLPKGRVVE+YGPEASGKTTLALHVIAEAQK GGYCAFVDAEHALD
Sbjct: 69   STGSFALDMALGIGGLPKGRVVEVYGPEASGKTTLALHVIAEAQKYGGYCAFVDAEHALD 128

Query: 635  PALAESIGVKTENLLLSQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMG 814
            P LAESIGVKT+NLLLSQPDCGEQALSLVDTLIRSG            LVPKSEL+GEMG
Sbjct: 129  PTLAESIGVKTDNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMG 188

Query: 815  DAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTF-GFGGPTEVTSGGNALKF 991
            DAH+ALQARLMSQALRKLSHSLS+SQTILLFINQVRSK+ TF GFGGPTEVTSGGNALKF
Sbjct: 189  DAHVALQARLMSQALRKLSHSLSLSQTILLFINQVRSKVSTFGGFGGPTEVTSGGNALKF 248

Query: 992  YSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFGKGIARESEIIDL 1171
            Y+SVRLNIKRIG VKKGEET+GSQ+LVK+VKNKHAPPFKTAQFELEFGKGI R+SEIIDL
Sbjct: 249  YASVRLNIKRIGLVKKGEETVGSQVLVKIVKNKHAPPFKTAQFELEFGKGICRDSEIIDL 308

Query: 1172 GCKHKFISRS-GAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXXXXIRSEIEKKHD 1348
            G K+KFI+++ GA+Y+FN ++F GKDA+KRYFAE+               ++++ EKKHD
Sbjct: 309  GLKNKFITKAGGAFYNFNGQSFRGKDAIKRYFAENEGVRDEVMTKLKEKLMQNDTEKKHD 368

Query: 1349 SETEAPD 1369
            S +E  +
Sbjct: 369  SGSETAE 375


>ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial [Vitis
            vinifera]
 emb|CBI27899.3| unnamed protein product, partial [Vitis vinifera]
          Length = 421

 Score =  535 bits (1377), Expect = 0.0
 Identities = 281/403 (69%), Positives = 322/403 (79%), Gaps = 3/403 (0%)
 Frame = +2

Query: 179  MARLLRSVC-LRRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDV 355
            MARLLR+   LR +L + E  R+G+LG++SQF NFS+K +R            N+SKK++
Sbjct: 1    MARLLRNASSLRHSLFAVEGFRKGVLGTSSQFCNFSSKGRRRSKSDGSDSNEENLSKKEL 60

Query: 356  ALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGP 535
            AL QALDQI  SFGKG+IMWLGRS + + VPV+STGSFALDI LGIGGLPKGRVVEIYGP
Sbjct: 61   ALRQALDQITTSFGKGSIMWLGRSVSSKHVPVVSTGSFALDIVLGIGGLPKGRVVEIYGP 120

Query: 536  EASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALS 715
            EASGKTTLALHVIAEAQK GGYC FVDAEHALDPALAE+IGV T+NLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAEAIGVNTQNLLLSQPDCGEQALS 180

Query: 716  LVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQT 895
            LVDTLIRSG            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 896  ILLFINQVRSKLQTF-GFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILV 1072
            IL+FINQVR+KL TF GFGGPTEVT GGNALKFY+SVRLNIKRIG VKKGEETIGSQ+LV
Sbjct: 241  ILIFINQVRAKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQVLV 300

Query: 1073 KVVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISR-SGAYYSFNDETFHGKDA 1249
            KVVKNKHAPPFKTAQFELEFGKGI RESEI++LGCKHKFI +  GA YS+N ++F GKDA
Sbjct: 301  KVVKNKHAPPFKTAQFELEFGKGICRESEIVELGCKHKFIIKGGGAMYSYNGQSFRGKDA 360

Query: 1250 MKRYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAPDGDV 1378
            +K++ +++               +  E  K+ + E EA D D+
Sbjct: 361  IKQFLSQNESEREELMRKLREKLV-GETNKEKELEAEAVDEDI 402


>ref|XP_011077996.1| DNA repair protein recA homolog 3, mitochondrial [Sesamum indicum]
          Length = 423

 Score =  535 bits (1377), Expect = 0.0
 Identities = 280/402 (69%), Positives = 321/402 (79%), Gaps = 3/402 (0%)
 Frame = +2

Query: 179  MARLLRSV-CLRRTLLSP-ETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKD 352
            MARLLRS  CLRR+L    +  R+G+L +++Q R+FS K +R            NMSKKD
Sbjct: 1    MARLLRSSSCLRRSLFPQLQESRKGVLETSTQLRDFSTKGRRKSKSDASDSGEENMSKKD 60

Query: 353  VALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYG 532
            +AL  ALDQI ASFGKG+IMWLGRS APR+ PV+STGSFALDIALGIGGLPKGRVVEIYG
Sbjct: 61   LALKLALDQITASFGKGSIMWLGRSVAPRQTPVVSTGSFALDIALGIGGLPKGRVVEIYG 120

Query: 533  PEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQAL 712
            PEASGKTTLALHVIAEAQK GGYC FVDAEHALDPALAE+IGV TENLLLSQPDCGEQAL
Sbjct: 121  PEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAEAIGVNTENLLLSQPDCGEQAL 180

Query: 713  SLVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQ 892
            SLVDTLIRSG            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQ
Sbjct: 181  SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 893  TILLFINQVRSKLQTF-GFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQIL 1069
            TIL+F NQVRSKL TF GFGGPTEVT GGNALKFY+SVRLNIKR G VKKGEET+GSQ++
Sbjct: 241  TILIFTNQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRTGLVKKGEETVGSQVV 300

Query: 1070 VKVVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDA 1249
            VK+VKNKHAPPFKTA+FELEFG+GI RE+E+IDLGCKHKFI+++GAY+  ++++F GKDA
Sbjct: 301  VKIVKNKHAPPFKTAEFELEFGRGICREAELIDLGCKHKFITKAGAYFYMDNQSFQGKDA 360

Query: 1250 MKRYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAPDGD 1375
            +KR+ A++               I  E E + +S   A D D
Sbjct: 361  LKRFLADNVSARDGLTEKLRQKLIDVEPENEKESIIGAIDRD 402


>ref|XP_004970942.1| DNA repair protein recA homolog 3, mitochondrial [Setaria italica]
 gb|KQL08175.1| hypothetical protein SETIT_001546mg [Setaria italica]
          Length = 427

 Score =  533 bits (1374), Expect = 0.0
 Identities = 282/404 (69%), Positives = 314/404 (77%), Gaps = 8/404 (1%)
 Frame = +2

Query: 179  MARLLRSVCLRRTLLS-------PETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXN 337
            MA LLR V LRR + +       PE+ +QGI GS    R FS+KAK+            N
Sbjct: 1    MATLLRRVSLRRAIAAASYSSSHPESYKQGICGSTFHCREFSSKAKKKSKSSGTDSGEEN 60

Query: 338  MSKKDVALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRV 517
            MSKKD+ALHQA+DQI ++FGKGAIMWLGRS   R+VPVISTGSFALD+ALG GG PKGRV
Sbjct: 61   MSKKDLALHQAIDQITSAFGKGAIMWLGRSQGHRDVPVISTGSFALDMALGTGGFPKGRV 120

Query: 518  VEIYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDC 697
            +E+YGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGV T NLLLSQPDC
Sbjct: 121  IEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVDTNNLLLSQPDC 180

Query: 698  GEQALSLVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHS 877
             EQALSLVDTLIRSG            LVPK+EL+GEMGDAH+ALQARLMSQALRKLSHS
Sbjct: 181  AEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRKLSHS 240

Query: 878  LSVSQTILLFINQVRSKLQTFGFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIG 1057
            LS+SQTILLFINQ R+K+ TFGFGGPTEVTSGGNALKFY+SVRLNIKRIG VKKGEETIG
Sbjct: 241  LSLSQTILLFINQTRAKVATFGFGGPTEVTSGGNALKFYASVRLNIKRIGLVKKGEETIG 300

Query: 1058 SQILVKVVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISR-SGAYYSFNDETF 1234
            SQ+ VK+VKNKHAPPFKTAQFE+EFGKGI R SE+++LG K K I + SGAYYSFND TF
Sbjct: 301  SQVAVKIVKNKHAPPFKTAQFEIEFGKGICRSSELVELGLKRKLIKKISGAYYSFNDITF 360

Query: 1235 HGKDAMKRYFAESXXXXXXXXXXXXXXXIRSEIEKKHDSETEAP 1366
            HGKD +K Y  E+                  E++ K   ETEAP
Sbjct: 361  HGKDNLKSYLTENESVAKDL-----------EMQLKKLMETEAP 393


>ref|XP_022732650.1| DNA repair protein recA homolog 3, mitochondrial-like isoform X1
            [Durio zibethinus]
          Length = 420

 Score =  533 bits (1373), Expect = 0.0
 Identities = 271/367 (73%), Positives = 310/367 (84%), Gaps = 2/367 (0%)
 Frame = +2

Query: 179  MARLLRSVC-LRRTLLSPETCRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDV 355
            MAR +R++  L+R+L +PE CR G+LGS+SQ  NFS+K ++            NMSKKD+
Sbjct: 1    MARFIRNMSSLKRSLFAPEVCRGGVLGSSSQLCNFSSKGRKNSKSDSSDSSDENMSKKDL 60

Query: 356  ALHQALDQIQASFGKGAIMWLGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGP 535
            AL QALDQI ++FGKG+IMWLGRS +PR VPV+STGSF LDIALG GGLPKGRVVEI+GP
Sbjct: 61   ALKQALDQITSTFGKGSIMWLGRSVSPRNVPVVSTGSFCLDIALGTGGLPKGRVVEIFGP 120

Query: 536  EASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALS 715
            EASGKTTLALHVIAEAQK GGYC FVDAEHALDPALAE+IGV TENLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAETIGVNTENLLLSQPDCGEQALS 180

Query: 716  LVDTLIRSGXXXXXXXXXXXXLVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQT 895
            LVDTLIRSG            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 896  ILLFINQVRSKLQTF-GFGGPTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILV 1072
            IL+FINQVRSKL TF GFGGPTEVT GGNALKFY+SVRLNI+R GFVKKGEE IGSQILV
Sbjct: 241  ILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIRRTGFVKKGEEIIGSQILV 300

Query: 1073 KVVKNKHAPPFKTAQFELEFGKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAM 1252
            K+VKNK APPFK A+FELEFGKGI+RE EIIDL  KHKF+++SG++Y+FND+  HGK+A 
Sbjct: 301  KIVKNKLAPPFKNAEFELEFGKGISREVEIIDLATKHKFVTKSGSFYTFNDKKLHGKEAF 360

Query: 1253 KRYFAES 1273
            K++ AE+
Sbjct: 361  KKFLAEN 367