BLASTX nr result

ID: Ophiopogon23_contig00022316 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00022316
         (407 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020267460.1| ERAD-associated E3 ubiquitin-protein ligase ...    54   8e-06
gb|ONK67889.1| uncharacterized protein A4U43_C05F4850 [Asparagus...    54   8e-06

>ref|XP_020267460.1| ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Asparagus
           officinalis]
          Length = 478

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = -1

Query: 407 QIEILRSELRAVQKQEQDVSRVGHGDADCPLSDAKGKAVIDAA 279
           QIEILRSEL+AVQKQ++D  +   GDAD  +SD KGKA+++A+
Sbjct: 435 QIEILRSELQAVQKQKKDEDKASIGDADGAVSDIKGKAIVNAS 477


>gb|ONK67889.1| uncharacterized protein A4U43_C05F4850 [Asparagus officinalis]
          Length = 519

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = -1

Query: 407 QIEILRSELRAVQKQEQDVSRVGHGDADCPLSDAKGKAVIDAA 279
           QIEILRSEL+AVQKQ++D  +   GDAD  +SD KGKA+++A+
Sbjct: 476 QIEILRSELQAVQKQKKDEDKASIGDADGAVSDIKGKAIVNAS 518


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