BLASTX nr result
ID: Ophiopogon23_contig00022209
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00022209
(479 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKU70834.1| Mediator of RNA polymerase II transcription subun... 72 4e-12
ref|XP_020681194.1| mediator of RNA polymerase II transcription ... 72 5e-12
ref|XP_020265242.1| mediator of RNA polymerase II transcription ... 70 2e-11
ref|XP_020265240.1| mediator of RNA polymerase II transcription ... 70 2e-11
emb|CBI36012.3| unnamed protein product, partial [Vitis vinifera] 67 1e-10
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera] 67 2e-10
ref|XP_002282496.1| PREDICTED: mediator of RNA polymerase II tra... 67 2e-10
gb|KJB70361.1| hypothetical protein B456_011G069400 [Gossypium r... 66 2e-10
gb|KJB70360.1| hypothetical protein B456_011G069400 [Gossypium r... 66 3e-10
gb|OVA14465.1| Mediator complex [Macleaya cordata] 67 3e-10
ref|XP_020588481.1| mediator of RNA polymerase II transcription ... 66 5e-10
ref|XP_012455201.1| PREDICTED: mediator of RNA polymerase II tra... 66 5e-10
ref|XP_016701074.1| PREDICTED: mediator of RNA polymerase II tra... 66 7e-10
gb|POE85925.1| mediator of rna polymerase ii transcription subun... 61 2e-09
ref|XP_008774994.1| PREDICTED: mediator of RNA polymerase II tra... 65 2e-09
gb|PPD74763.1| hypothetical protein GOBAR_DD28315 [Gossypium bar... 64 4e-09
ref|XP_006372643.1| RNA polymerase transcriptional regulation me... 64 4e-09
gb|PNX73856.1| mediator of RNA polymerase II transcription subun... 59 5e-09
ref|XP_020090764.1| mediator of RNA polymerase II transcription ... 63 7e-09
gb|OAY81971.1| Mediator of RNA polymerase II transcription subun... 63 7e-09
>gb|PKU70834.1| Mediator of RNA polymerase II transcription subunit 6 [Dendrobium
catenatum]
Length = 234
Score = 71.6 bits (174), Expect = 4e-12
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1
Query: 1 EGYAPPTSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 126
EGYAPP SE EK ED QN + QLP+VDPIIDQGP+KRMKFQ
Sbjct: 193 EGYAPPASEAEKGTEDTQNPEAQLPTVDPIIDQGPAKRMKFQ 234
>ref|XP_020681194.1| mediator of RNA polymerase II transcription subunit 6 isoform X1
[Dendrobium catenatum]
ref|XP_020681195.1| mediator of RNA polymerase II transcription subunit 6 isoform X2
[Dendrobium catenatum]
Length = 257
Score = 71.6 bits (174), Expect = 5e-12
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1
Query: 1 EGYAPPTSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 126
EGYAPP SE EK ED QN + QLP+VDPIIDQGP+KRMKFQ
Sbjct: 216 EGYAPPASEAEKGTEDTQNPEAQLPTVDPIIDQGPAKRMKFQ 257
>ref|XP_020265242.1| mediator of RNA polymerase II transcription subunit 6 isoform X2
[Asparagus officinalis]
Length = 267
Score = 70.1 bits (170), Expect = 2e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +1
Query: 1 EGYAPPTSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 126
+GY PPTS+GEKA EDQQ+T VQ P +DPIIDQGPSKR K+Q
Sbjct: 226 DGYVPPTSDGEKAAEDQQSTDVQPPPLDPIIDQGPSKRTKYQ 267
>ref|XP_020265240.1| mediator of RNA polymerase II transcription subunit 6 isoform X1
[Asparagus officinalis]
ref|XP_020265241.1| mediator of RNA polymerase II transcription subunit 6 isoform X1
[Asparagus officinalis]
gb|ONK70032.1| uncharacterized protein A4U43_C05F29550 [Asparagus officinalis]
Length = 269
Score = 70.1 bits (170), Expect = 2e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +1
Query: 1 EGYAPPTSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 126
+GY PPTS+GEKA EDQQ+T VQ P +DPIIDQGPSKR K+Q
Sbjct: 228 DGYVPPTSDGEKAAEDQQSTDVQPPPLDPIIDQGPSKRTKYQ 269
>emb|CBI36012.3| unnamed protein product, partial [Vitis vinifera]
Length = 226
Score = 67.4 bits (163), Expect = 1e-10
Identities = 32/42 (76%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Frame = +1
Query: 1 EGYAPP-TSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 123
EGYAPP T+EGEK PE QQ + QLP++DPIIDQGPSKRMKF
Sbjct: 185 EGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 226
>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
Length = 253
Score = 67.4 bits (163), Expect = 2e-10
Identities = 32/42 (76%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Frame = +1
Query: 1 EGYAPP-TSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 123
EGYAPP T+EGEK PE QQ + QLP++DPIIDQGPSKRMKF
Sbjct: 212 EGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 253
>ref|XP_002282496.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Vitis vinifera]
Length = 258
Score = 67.4 bits (163), Expect = 2e-10
Identities = 32/42 (76%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Frame = +1
Query: 1 EGYAPP-TSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 123
EGYAPP T+EGEK PE QQ + QLP++DPIIDQGPSKRMKF
Sbjct: 217 EGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 258
>gb|KJB70361.1| hypothetical protein B456_011G069400 [Gossypium raimondii]
Length = 169
Score = 65.9 bits (159), Expect = 2e-10
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1
Query: 1 EGYAPPTSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 123
+G+ PPT+E EK PE+QQ T+ Q P+VDPIIDQGP+KRMKF
Sbjct: 129 DGFVPPTTEAEKEPENQQTTEPQPPAVDPIIDQGPAKRMKF 169
>gb|KJB70360.1| hypothetical protein B456_011G069400 [Gossypium raimondii]
Length = 183
Score = 65.9 bits (159), Expect = 3e-10
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1
Query: 1 EGYAPPTSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 123
+G+ PPT+E EK PE+QQ T+ Q P+VDPIIDQGP+KRMKF
Sbjct: 143 DGFVPPTTEAEKEPENQQTTEPQPPAVDPIIDQGPAKRMKF 183
>gb|OVA14465.1| Mediator complex [Macleaya cordata]
Length = 256
Score = 67.0 bits (162), Expect = 3e-10
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +1
Query: 1 EGYAPPTSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 123
EGY PPTSE +K E+QQ T+ QLP +DPIIDQGPSKRMKF
Sbjct: 216 EGYVPPTSEADKGTENQQATEPQLPPLDPIIDQGPSKRMKF 256
>ref|XP_020588481.1| mediator of RNA polymerase II transcription subunit 6 [Phalaenopsis
equestris]
Length = 257
Score = 66.2 bits (160), Expect = 5e-10
Identities = 30/42 (71%), Positives = 32/42 (76%)
Frame = +1
Query: 1 EGYAPPTSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 126
EGYAPP E EDQQN + QLP VDPIIDQGP+KRMKFQ
Sbjct: 216 EGYAPPAFEAVNGSEDQQNLEAQLPPVDPIIDQGPAKRMKFQ 257
>ref|XP_012455201.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Gossypium raimondii]
gb|KJB70362.1| hypothetical protein B456_011G069400 [Gossypium raimondii]
gb|KJB70364.1| hypothetical protein B456_011G069400 [Gossypium raimondii]
Length = 232
Score = 65.9 bits (159), Expect = 5e-10
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1
Query: 1 EGYAPPTSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 123
+G+ PPT+E EK PE+QQ T+ Q P+VDPIIDQGP+KRMKF
Sbjct: 192 DGFVPPTTEAEKEPENQQTTEPQPPAVDPIIDQGPAKRMKF 232
>ref|XP_016701074.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like [Gossypium hirsutum]
Length = 256
Score = 65.9 bits (159), Expect = 7e-10
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1
Query: 1 EGYAPPTSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 123
+G+ PPT+E EK PE+QQ T+ Q P+VDPIIDQGP+KRMKF
Sbjct: 216 DGFVPPTTEAEKEPENQQTTEPQPPAVDPIIDQGPAKRMKF 256
>gb|POE85925.1| mediator of rna polymerase ii transcription subunit 6 [Quercus
suber]
Length = 73
Score = 60.8 bits (146), Expect = 2e-09
Identities = 30/42 (71%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Frame = +1
Query: 1 EGYAPPTS-EGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 123
EGY PP S + EKAPE QQ+ +VQ P VDPIIDQGP+KRMKF
Sbjct: 32 EGYVPPASADTEKAPEVQQSGEVQPPPVDPIIDQGPAKRMKF 73
>ref|XP_008774994.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Phoenix dactylifera]
Length = 260
Score = 64.7 bits (156), Expect = 2e-09
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = +1
Query: 1 EGYAPPTS-EGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 126
EGYAPP+S E EK PEDQQ Q+P +DPIIDQGP+KR+KFQ
Sbjct: 218 EGYAPPSSSEAEKGPEDQQTADPQVPPMDPIIDQGPAKRIKFQ 260
>gb|PPD74763.1| hypothetical protein GOBAR_DD28315 [Gossypium barbadense]
Length = 256
Score = 63.9 bits (154), Expect = 4e-09
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = +1
Query: 1 EGYAPPTSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 123
+G+ PPT+E EK PE+QQ + Q P+VDPIIDQGP+KRMKF
Sbjct: 216 DGFVPPTTEAEKEPENQQTAEPQPPAVDPIIDQGPAKRMKF 256
>ref|XP_006372643.1| RNA polymerase transcriptional regulation mediator-related family
protein [Populus trichocarpa]
gb|PNS97024.1| hypothetical protein POPTR_017G154400v3 [Populus trichocarpa]
Length = 259
Score = 63.9 bits (154), Expect = 4e-09
Identities = 31/42 (73%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Frame = +1
Query: 1 EGYAP-PTSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 123
EGY P PT+E EK PE QQ + QLPSVDPIIDQGP+KRMKF
Sbjct: 218 EGYVPQPTTEEEKGPETQQGGEPQLPSVDPIIDQGPAKRMKF 259
>gb|PNX73856.1| mediator of RNA polymerase II transcription subunit 10b-like
protein [Trifolium pratense]
gb|PNY02708.1| mediator of RNA polymerase II transcription-like protein [Trifolium
pratense]
Length = 57
Score = 59.3 bits (142), Expect = 5e-09
Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = +1
Query: 1 EGYAPP-TSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 123
EGY PP T+E +K E Q+ T+ Q P+VDPIIDQGPSKRMKF
Sbjct: 16 EGYVPPSTAETDKGSETQEATETQAPTVDPIIDQGPSKRMKF 57
>ref|XP_020090764.1| mediator of RNA polymerase II transcription subunit 6 [Ananas
comosus]
ref|XP_020090765.1| mediator of RNA polymerase II transcription subunit 6 [Ananas
comosus]
ref|XP_020090766.1| mediator of RNA polymerase II transcription subunit 6 [Ananas
comosus]
Length = 259
Score = 63.2 bits (152), Expect = 7e-09
Identities = 29/43 (67%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = +1
Query: 1 EGYAPP-TSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 126
EGY PP TSE EK PEDQQ+ + QLP +DPIIDQGP+KR++ Q
Sbjct: 217 EGYMPPPTSEPEKGPEDQQSLETQLPPLDPIIDQGPAKRLRIQ 259
>gb|OAY81971.1| Mediator of RNA polymerase II transcription subunit 6 [Ananas
comosus]
Length = 259
Score = 63.2 bits (152), Expect = 7e-09
Identities = 29/43 (67%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = +1
Query: 1 EGYAPP-TSEGEKAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 126
EGY PP TSE EK PEDQQ+ + QLP +DPIIDQGP+KR++ Q
Sbjct: 217 EGYMPPPTSEPEKGPEDQQSLETQLPPLDPIIDQGPAKRLRIQ 259