BLASTX nr result

ID: Ophiopogon23_contig00021410 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00021410
         (434 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020246582.1| WD repeat-containing protein 43-like [Aspara...    75   4e-13
ref|XP_020242678.1| LOW QUALITY PROTEIN: WD repeat-containing pr...    65   1e-09

>ref|XP_020246582.1| WD repeat-containing protein 43-like [Asparagus officinalis]
          Length = 305

 Score = 74.7 bits (182), Expect = 4e-13
 Identities = 38/79 (48%), Positives = 52/79 (65%)
 Frame = -1

Query: 242 DGDHGEENGNLGTNGXXXXXXXXKRTASDFDSRGEILVDAEANHEVDGEYDVNEPTMEEK 63
           D + G+E GNL T+G        KR+A   DS+ E  ++A   H+VD EYDVNEPTM EK
Sbjct: 38  DVEEGQEGGNLDTDGKRKKNKSKKRSAPALDSQEERCINAGVTHKVDDEYDVNEPTMAEK 97

Query: 62  LASLGLIDDNKSKTITELE 6
           LASL L++++KSK + + E
Sbjct: 98  LASLDLVNEDKSKNVDKQE 116


>ref|XP_020242678.1| LOW QUALITY PROTEIN: WD repeat-containing protein 43-like
           [Asparagus officinalis]
          Length = 261

 Score = 65.1 bits (157), Expect = 1e-09
 Identities = 34/72 (47%), Positives = 46/72 (63%)
 Frame = -1

Query: 242 DGDHGEENGNLGTNGXXXXXXXXKRTASDFDSRGEILVDAEANHEVDGEYDVNEPTMEEK 63
           D + G+E G L  +G        KR+A   DS+ E  ++A   H+VD EYDVNEPTM EK
Sbjct: 3   DVEKGQEGGILDIDGKREKKKSKKRSAPALDSQEETCINAGVTHKVDDEYDVNEPTMAEK 62

Query: 62  LASLGLIDDNKS 27
           LASL L++++KS
Sbjct: 63  LASLDLVNEDKS 74


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