BLASTX nr result
ID: Ophiopogon23_contig00021352
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00021352
(1846 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PRQ15682.1| putative DNA-directed RNA polymerase (chloroplast... 468 e-157
gb|PLY63219.1| hypothetical protein LSAT_0X41600 [Lactuca sativa] 421 e-137
gb|AEX94405.1| RNA polymerase alpha subunit (chloroplast) [Lirio... 281 3e-86
gb|AEX94406.1| RNA polymerase alpha subunit (chloroplast) [Ophio... 281 4e-86
ref|YP_009236392.1| RNA polymerase alpha subunit (chloroplast) [... 279 2e-85
ref|YP_009180140.1| RNA polymerase alpha subunit (chloroplast) [... 279 2e-85
ref|YP_009431250.1| RNA polymerase alpha subunit (chloroplast) [... 279 2e-85
gb|AEX94409.1| RNA polymerase alpha subunit (chloroplast) [Maian... 279 2e-85
gb|AEX94407.1| RNA polymerase alpha subunit (chloroplast) [Ruscu... 279 2e-85
gb|AEX94403.1| RNA polymerase alpha subunit (chloroplast) [Dasyl... 279 2e-85
gb|AEX94402.1| RNA polymerase alpha subunit (chloroplast) [Beauc... 279 2e-85
ref|YP_009432335.1| RNA polymerase alpha subunit (chloroplast) [... 279 3e-85
ref|YP_009183231.1| RNA polymerase alpha subunit (chloroplast) [... 279 3e-85
gb|AEZ49464.1| RNA polymerase alpha subunit, partial (plastid) [... 279 3e-85
gb|AEZ49457.1| RNA polymerase alpha subunit, partial (plastid) [... 279 3e-85
ref|YP_009335365.1| RNA polymerase alpha subunit (chloroplast) [... 279 3e-85
gb|AEX94408.1| RNA polymerase alpha subunit (chloroplast) [Sanse... 278 6e-85
gb|APO11418.1| RNA polymerase alpha subunit (chloroplast) [Behni... 277 2e-84
ref|YP_003434007.1| RNA polymerase alpha subunit [Typha latifoli... 277 2e-84
gb|AEX94404.1| RNA polymerase alpha subunit (chloroplast) [Erios... 276 2e-84
>gb|PRQ15682.1| putative DNA-directed RNA polymerase (chloroplast) [Rosa chinensis]
Length = 464
Score = 468 bits (1205), Expect = e-157
Identities = 242/307 (78%), Positives = 257/307 (83%)
Frame = -3
Query: 923 MAKPIQKMGSRRNGRIGSRKNGRRIPKGVIHVQASFNNTIVTVTDVRGRVISWASAGTSG 744
MAKPI K+GSRRN RIGSRKN RRIPKGVIHVQASFNNTIVTVTDVRGRVISW+SAGT G
Sbjct: 1 MAKPIPKIGSRRNRRIGSRKNARRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 743 FKGTRRKTPYAAQAAASNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVR 564
FKGTRR TP+AAQ AA NAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSF+R
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFIR 120
Query: 563 DVTPMPHNGCXXXXXXXXXX*ELNGLQEK*MIQ*SDQIIIFSMVREEIAGSTRTLQWKCV 384
DVTPMPHNGC R ++ STRTLQWKCV
Sbjct: 121 DVTPMPHNGCRPPKK-----------------------------RRKVTVSTRTLQWKCV 151
Query: 383 ESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKFERVPHEYSTIV 204
ESR DSKRLYYGRFIL+PLMKGQADTIGIAMRRALLGEIEGTCITRA+ E++PHEYSTIV
Sbjct: 152 ESRADSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGTCITRARSEKIPHEYSTIV 211
Query: 203 GIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQDIILPPSVEIVDTTQHIAN 24
GI+ESVHE+L+NLKEIVLRSNLYG R+ASICV GP YVTAQDIILPPSVEIVD TQHIAN
Sbjct: 212 GIQESVHEILMNLKEIVLRSNLYGTRNASICVKGPGYVTAQDIILPPSVEIVDNTQHIAN 271
Query: 23 LTEPIDL 3
LTEPI+L
Sbjct: 272 LTEPINL 278
>gb|PLY63219.1| hypothetical protein LSAT_0X41600 [Lactuca sativa]
Length = 585
Score = 421 bits (1082), Expect = e-137
Identities = 221/304 (72%), Positives = 242/304 (79%)
Frame = -3
Query: 914 PIQKMGSRRNGRIGSRKNGRRIPKGVIHVQASFNNTIVTVTDVRGRVISWASAGTSGFKG 735
PI K GSR G IGSRK+ R+IPKGVIH+QASFNNTIVTVT+VRGRV+SW+S GTSGF+G
Sbjct: 93 PIPKKGSR--GHIGSRKSTRKIPKGVIHIQASFNNTIVTVTNVRGRVVSWSSPGTSGFRG 150
Query: 734 TRRKTPYAAQAAASNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVT 555
T+R TP+AAQ AA +AIR VVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILL+FVRDVT
Sbjct: 151 TKRGTPFAAQTAAGHAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVRDVT 210
Query: 554 PMPHNGCXXXXXXXXXX*ELNGLQEK*MIQ*SDQIIIFSMVREEIAGSTRTLQWKCVESR 375
PMPHNGC STRTLQWKCVES
Sbjct: 211 PMPHNGCRPPKKRL---------------------------------STRTLQWKCVESA 237
Query: 374 VDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKFERVPHEYSTIVGIE 195
DSKRL YGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAK E++ HEYSTI+GI+
Sbjct: 238 ADSKRLLYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKISHEYSTIMGIQ 297
Query: 194 ESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQDIILPPSVEIVDTTQHIANLTE 15
ESVHE+L+NLKEIVLRSNLYG +ASICV GP YVTAQDIILPP VEI+D TQHIA+LTE
Sbjct: 298 ESVHEILMNLKEIVLRSNLYGTCEASICVRGPGYVTAQDIILPPYVEILDNTQHIASLTE 357
Query: 14 PIDL 3
PI+L
Sbjct: 358 PIEL 361
>gb|AEX94405.1| RNA polymerase alpha subunit (chloroplast) [Liriope spicata]
Length = 339
Score = 281 bits (720), Expect = 3e-86
Identities = 142/145 (97%), Positives = 143/145 (98%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICVMGPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>gb|AEX94406.1| RNA polymerase alpha subunit (chloroplast) [Ophiopogon japonicus]
Length = 339
Score = 281 bits (719), Expect = 4e-86
Identities = 141/145 (97%), Positives = 143/145 (98%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTI+GIEESVHE+LINLKEIVLRSNLYGVRDASICVMGPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIIGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>ref|YP_009236392.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum sibiricum]
gb|AMF84092.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum sibiricum]
Length = 333
Score = 279 bits (714), Expect = 2e-85
Identities = 141/145 (97%), Positives = 142/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>ref|YP_009180140.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum cyrtonema]
gb|ALL96494.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum cyrtonema]
Length = 335
Score = 279 bits (714), Expect = 2e-85
Identities = 141/145 (97%), Positives = 142/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>ref|YP_009431250.1| RNA polymerase alpha subunit (chloroplast) [Maianthemum bicolor]
gb|ASW26686.1| RNA polymerase alpha subunit (chloroplast) [Maianthemum bicolor]
Length = 339
Score = 279 bits (714), Expect = 2e-85
Identities = 141/145 (97%), Positives = 142/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>gb|AEX94409.1| RNA polymerase alpha subunit (chloroplast) [Maianthemum stellatum]
Length = 339
Score = 279 bits (714), Expect = 2e-85
Identities = 141/145 (97%), Positives = 142/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>gb|AEX94407.1| RNA polymerase alpha subunit (chloroplast) [Ruscus aculeatus]
Length = 339
Score = 279 bits (714), Expect = 2e-85
Identities = 141/145 (97%), Positives = 142/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>gb|AEX94403.1| RNA polymerase alpha subunit (chloroplast) [Dasylirion wheeleri]
Length = 339
Score = 279 bits (714), Expect = 2e-85
Identities = 141/145 (97%), Positives = 142/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>gb|AEX94402.1| RNA polymerase alpha subunit (chloroplast) [Beaucarnea hookeri]
Length = 339
Score = 279 bits (714), Expect = 2e-85
Identities = 141/145 (97%), Positives = 142/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>ref|YP_009432335.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum
stenophyllum]
gb|ATB18590.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum
stenophyllum]
Length = 342
Score = 279 bits (714), Expect = 3e-85
Identities = 141/145 (97%), Positives = 142/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>ref|YP_009183231.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum
verticillatum]
gb|ALM87736.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum
verticillatum]
Length = 342
Score = 279 bits (714), Expect = 3e-85
Identities = 141/145 (97%), Positives = 142/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>gb|AEZ49464.1| RNA polymerase alpha subunit, partial (plastid) [Sparganium
eurycarpum]
Length = 337
Score = 279 bits (713), Expect = 3e-85
Identities = 137/145 (94%), Positives = 143/145 (98%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREE+AGSTRT+QWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEVAGSTRTIQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTI+GIEESVHE+L+NLKEIVLRSNLYGVRDASIC+ GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIIGIEESVHEILLNLKEIVLRSNLYGVRDASICIRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
IILPPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IILPPSVEIVDTTQHIANLTEPIDL 145
>gb|AEZ49457.1| RNA polymerase alpha subunit, partial (plastid) [Nolina atopocarpa]
Length = 337
Score = 279 bits (713), Expect = 3e-85
Identities = 140/145 (96%), Positives = 142/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRF+LSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>ref|YP_009335365.1| RNA polymerase alpha subunit (chloroplast) [Nolina atopocarpa]
gb|APO12423.1| RNA polymerase alpha subunit (chloroplast) [Nolina atopocarpa]
Length = 339
Score = 279 bits (713), Expect = 3e-85
Identities = 140/145 (96%), Positives = 142/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRF+LSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>gb|AEX94408.1| RNA polymerase alpha subunit (chloroplast) [Sansevieria
trifasciata]
Length = 335
Score = 278 bits (711), Expect = 6e-85
Identities = 140/145 (96%), Positives = 142/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVES+VDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESKVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>gb|APO11418.1| RNA polymerase alpha subunit (chloroplast) [Behnia reticulata]
Length = 339
Score = 277 bits (708), Expect = 2e-84
Identities = 140/145 (96%), Positives = 141/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIA STRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145
>ref|YP_003434007.1| RNA polymerase alpha subunit [Typha latifolia]
gb|AAZ03869.1| RNA polymerase alpha chain, partial (chloroplast) [Typha latifolia]
gb|ADA63731.1| RNA polymerase alpha subunit (chloroplast) [Typha latifolia]
Length = 339
Score = 277 bits (708), Expect = 2e-84
Identities = 137/145 (94%), Positives = 142/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREE+AGSTRT+QWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEVAGSTRTIQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK ERVPHEYSTI+GIEESVHE+L+NLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIIGIEESVHEILLNLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
IILPPSVEIVD TQHIANLTEPIDL
Sbjct: 121 IILPPSVEIVDPTQHIANLTEPIDL 145
>gb|AEX94404.1| RNA polymerase alpha subunit (chloroplast) [Eriospermum cervicorne]
Length = 339
Score = 276 bits (707), Expect = 2e-84
Identities = 138/145 (95%), Positives = 142/145 (97%)
Frame = -3
Query: 437 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 258
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRF+LSPLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 60
Query: 257 CITRAKFERVPHEYSTIVGIEESVHEVLINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 78
CITRAK E+VPHEYSTIVGIEESVHE+LINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 77 IILPPSVEIVDTTQHIANLTEPIDL 3
II PPSVEIVDTTQHIANLTEPIDL
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDL 145