BLASTX nr result
ID: Ophiopogon23_contig00021118
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00021118
(403 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AMY96445.1| gag/pol protein [Momordica dioica] 85 1e-29
gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subc... 84 4e-29
gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Jap... 84 4e-29
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 80 1e-28
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 82 2e-28
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 82 2e-28
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] 82 2e-28
ref|XP_006471317.1| PREDICTED: uncharacterized protein LOC102616... 81 3e-28
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 80 7e-28
dbj|BAA22288.1| polyprotein [Oryza australiensis] 81 9e-28
gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica] 82 9e-28
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 80 1e-27
ref|XP_016511527.1| PREDICTED: uncharacterized protein LOC107828... 77 1e-27
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-... 79 2e-27
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 78 3e-27
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 78 3e-27
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 80 3e-27
gb|ABF96975.1| retrotransposon protein, putative, Ty1-copia subc... 78 3e-27
gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japoni... 78 3e-27
ref|XP_017233167.1| PREDICTED: uncharacterized protein LOC108207... 82 3e-27
>gb|AMY96445.1| gag/pol protein [Momordica dioica]
Length = 1313
Score = 85.1 bits (209), Expect(2) = 1e-29
Identities = 40/61 (65%), Positives = 47/61 (77%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KG LPFRHGI L CP+T +E E M IPYSSAIGSLMY MLCTRP++ +A+SI SRY
Sbjct: 1089 KGLLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAIGSLMYAMLCTRPDVCYALSIVSRY 1148
Query: 61 K 59
+
Sbjct: 1149 Q 1149
Score = 72.4 bits (176), Expect(2) = 1e-29
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFLTFQ 222
F MKDLG+A YILGI+++RDR NK +G+SQ++YIDK+L RF MQ+S + L F+
Sbjct: 1042 FSMKDLGEAQYILGIRIYRDRSNKTIGMSQSTYIDKVLSRFKMQDSKKGLLPFR 1095
>gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 649
Score = 84.0 bits (206), Expect(2) = 4e-29
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGFLP HGI+L CP+T +ER MS IPY+SAIGS++YGMLCTRP++ +A+S SRY
Sbjct: 440 KGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIVYGMLCTRPDVSYALSATSRY 499
Query: 61 KLYKDS 44
+ Y S
Sbjct: 500 QGYVPS 505
Score = 72.0 bits (175), Expect(2) = 4e-29
Identities = 31/51 (60%), Positives = 46/51 (90%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFL 231
F MKDLG+A+YILGI+++RDR +++GLSQ++YIDK+L+RF+MQ+S + FL
Sbjct: 393 FSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFL 443
>gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Japonica Group]
Length = 637
Score = 84.0 bits (206), Expect(2) = 4e-29
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGFLP HGI+L CP+T +ER MS IPY+SAIGS++YGMLCTRP++ +A+S SRY
Sbjct: 428 KGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIVYGMLCTRPDVSYALSATSRY 487
Query: 61 KLYKDS 44
+ Y S
Sbjct: 488 QGYVPS 493
Score = 72.0 bits (175), Expect(2) = 4e-29
Identities = 31/51 (60%), Positives = 46/51 (90%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFL 231
F MKDLG+A+YILGI+++RDR +++GLSQ++YIDK+L+RF+MQ+S + FL
Sbjct: 381 FSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFL 431
>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 80.5 bits (197), Expect(2) = 1e-28
Identities = 37/61 (60%), Positives = 46/61 (75%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGFLPFRHGI L P+T EE E M +PY+SA+GSLMY MLCTRP+I FA+ + SR+
Sbjct: 378 KGFLPFRHGIXLSKDQSPKTPEEIESMKAVPYASAVGSLMYAMLCTRPDICFAVGMVSRF 437
Query: 61 K 59
+
Sbjct: 438 Q 438
Score = 73.9 bits (180), Expect(2) = 1e-28
Identities = 36/54 (66%), Positives = 45/54 (83%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFLTFQ 222
FDMKDLG+A++ILGIKL R+R+ KM+GLSQA YID IL RF+MQ S + FL F+
Sbjct: 331 FDMKDLGEAAHILGIKLMRNRKKKMIGLSQALYIDTILNRFNMQGSKKGFLPFR 384
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gb|AAX92956.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA92827.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 81.6 bits (200), Expect(2) = 2e-28
Identities = 37/61 (60%), Positives = 47/61 (77%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGFLP HGI+L CP+T +ER MS IPY+SAIGS+MY MLCTRP++ +A+S SRY
Sbjct: 934 KGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRY 993
Query: 61 K 59
+
Sbjct: 994 Q 994
Score = 72.0 bits (175), Expect(2) = 2e-28
Identities = 31/51 (60%), Positives = 46/51 (90%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFL 231
F MKDLG+A+YILGI+++RDR +++GLSQ++YIDK+L+RF+MQ+S + FL
Sbjct: 887 FSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFL 937
>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 82.4 bits (202), Expect(2) = 2e-28
Identities = 40/73 (54%), Positives = 51/73 (69%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGFLP HGI+L CP+T +ER MS IPY+SAIGS+MY MLCTRP++ +A+S SRY
Sbjct: 993 KGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRY 1052
Query: 61 KLYKDSRKSKSGC 23
+ D +S C
Sbjct: 1053 Q--SDPGESLDSC 1063
Score = 71.2 bits (173), Expect(2) = 2e-28
Identities = 31/51 (60%), Positives = 46/51 (90%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFL 231
F MKDLG+A+YILGI+++RDR +++GLSQ++YIDK+L+RF+MQ+S + FL
Sbjct: 946 FSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKMLKRFNMQDSKKGFL 996
>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1063
Score = 82.4 bits (202), Expect(2) = 2e-28
Identities = 40/73 (54%), Positives = 51/73 (69%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGFLP HGI+L CP+T +ER MS IPY+SAIGS+MY MLCTRP++ +A+S SRY
Sbjct: 983 KGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRY 1042
Query: 61 KLYKDSRKSKSGC 23
+ D +S C
Sbjct: 1043 Q--SDPGESLDSC 1053
Score = 71.2 bits (173), Expect(2) = 2e-28
Identities = 31/51 (60%), Positives = 46/51 (90%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFL 231
F MKDLG+A+YILGI+++RDR +++GLSQ++YIDK+L+RF+MQ+S + FL
Sbjct: 936 FSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKMLKRFNMQDSKKGFL 986
>ref|XP_006471317.1| PREDICTED: uncharacterized protein LOC102616172 [Citrus sinensis]
Length = 389
Score = 80.9 bits (198), Expect(2) = 3e-28
Identities = 41/76 (53%), Positives = 51/76 (67%)
Frame = -1
Query: 238 GFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRYK 59
G LPFRHGI+ P+T EE E M R+PY++A+GSLM MLCTRP+I FA+ + R
Sbjct: 47 GLLPFRHGITFSKDQSPKTSEEIERMRRVPYATAVGSLMCAMLCTRPDICFAVRMSDR-- 104
Query: 58 LYKDSRKSKSGCVFTI 11
DSRKS SG VF +
Sbjct: 105 ---DSRKSTSGYVFAL 117
Score = 72.0 bits (175), Expect(2) = 3e-28
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = -3
Query: 377 MKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFLTFQ 222
MKDLG+ASYILGIKL RDR+NK L LSQA YIDKIL RFS++NS L F+
Sbjct: 1 MKDLGEASYILGIKLLRDRKNKTLALSQAVYIDKILARFSIENSKTGLLPFR 52
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 79.7 bits (195), Expect(2) = 7e-28
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGFLP HGI+L CP+T +ER MS IPY+SAIGS+MY MLCT P++ +A+S SRY
Sbjct: 797 KGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTHPDVSYALSATSRY 856
Query: 61 K 59
+
Sbjct: 857 Q 857
Score = 72.0 bits (175), Expect(2) = 7e-28
Identities = 31/51 (60%), Positives = 46/51 (90%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFL 231
F MKDLG+A+YILGI+++RDR +++GLSQ++YIDK+L+RF+MQ+S + FL
Sbjct: 750 FSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFL 800
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 81.3 bits (199), Expect(2) = 9e-28
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGFLP HGI+L CP+T +ER M +PY+SAIGS+MY MLCTRP++ +A+S SRY
Sbjct: 1063 KGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYALSATSRY 1122
Query: 61 K 59
+
Sbjct: 1123 Q 1123
Score = 70.1 bits (170), Expect(2) = 9e-28
Identities = 30/51 (58%), Positives = 45/51 (88%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFL 231
F MKDLG+A+YILGI+++RDR +++GLSQ++YIDK+L+RF+M +S + FL
Sbjct: 1016 FSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMHDSKKGFL 1066
>gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica]
Length = 1292
Score = 81.6 bits (200), Expect(2) = 9e-28
Identities = 50/123 (40%), Positives = 62/123 (50%), Gaps = 44/123 (35%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KG LPFRHGI L CP+T +E E M IPYSSA+GSLMY MLCTRP+I +++ I SRY
Sbjct: 1073 KGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRY 1132
Query: 61 K--------------------------LY------------------KDSRKSKSGCVFT 14
+ +Y KD+RKS SG VFT
Sbjct: 1133 QSNPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGSVFT 1192
Query: 13 IDG 5
++G
Sbjct: 1193 LNG 1195
Score = 69.7 bits (169), Expect(2) = 9e-28
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFLTFQ 222
F MKDLG+A YILGI++ R+R+NK L +SQASYIDK+L R+ MQNS + L F+
Sbjct: 1026 FQMKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQLPFR 1079
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 80.5 bits (197), Expect(2) = 1e-27
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KG LP RHG+ L CP+T ++ E M R+PY+SA+GSLMY MLCTRP+I FA+ + SRY
Sbjct: 413 KGNLPSRHGVHLSKEQCPKTPQDEEKMRRVPYASAVGSLMYAMLCTRPDICFAVGVVSRY 472
Query: 61 K 59
+
Sbjct: 473 Q 473
Score = 70.5 bits (171), Expect(2) = 1e-27
Identities = 31/46 (67%), Positives = 42/46 (91%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNS 246
F MKDLG+ASYILGI++ RDR+N++L LSQA+YIDK+L +F+M+NS
Sbjct: 366 FQMKDLGEASYILGIQMTRDRKNRLLALSQAAYIDKVLVKFAMENS 411
>ref|XP_016511527.1| PREDICTED: uncharacterized protein LOC107828675 [Nicotiana tabacum]
Length = 431
Score = 77.0 bits (188), Expect(2) = 1e-27
Identities = 38/79 (48%), Positives = 50/79 (63%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGFLPFRHG + +T ++ E M +PY+SA+GSLMY MLCTR +I F + +
Sbjct: 318 KGFLPFRHGFFMSKNQSAKTTDDTEKMKVVPYASAVGSLMYAMLCTRLDICFVVGMSD-- 375
Query: 61 KLYKDSRKSKSGCVFTIDG 5
DSRKS SG +FT+ G
Sbjct: 376 ---SDSRKSTSGYIFTLGG 391
Score = 73.9 bits (180), Expect(2) = 1e-27
Identities = 37/54 (68%), Positives = 45/54 (83%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFLTFQ 222
FDMKDLGQA++ILGIKL RDR+ ++LGLSQA YID IL R SMQ+S + FL F+
Sbjct: 271 FDMKDLGQAAHILGIKLMRDRKRRILGLSQALYIDTILTRLSMQDSKKGFLPFR 324
>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gb|ABA93176.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 938
Score = 79.3 bits (194), Expect(2) = 2e-27
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGFLP HGI+L CP+T ER MS IPY+SAIGS+MY MLCTRP++ +A+S S+Y
Sbjct: 782 KGFLPMSHGINLGKNQCPQTTNERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSQY 841
Query: 61 K 59
+
Sbjct: 842 Q 842
Score = 70.9 bits (172), Expect(2) = 2e-27
Identities = 30/51 (58%), Positives = 46/51 (90%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFL 231
F MKDLG+A+YILGI++++DR +++GLSQ++YIDK+L+RF+MQ+S + FL
Sbjct: 735 FSMKDLGEAAYILGIRIYKDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFL 785
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 77.8 bits (190), Expect(2) = 3e-27
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGFLP HGI+L CP+T +ER MS IPY+SAIGS+MY MLCTR ++ +A+S SRY
Sbjct: 1012 KGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYALSATSRY 1071
Query: 61 K 59
+
Sbjct: 1072 Q 1072
Score = 72.0 bits (175), Expect(2) = 3e-27
Identities = 31/51 (60%), Positives = 46/51 (90%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFL 231
F MKDLG+A+YILGI+++RDR +++GLSQ++YIDK+L+RF+MQ+S + FL
Sbjct: 965 FSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFL 1015
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 77.8 bits (190), Expect(2) = 3e-27
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGFLP HGI+L CP+T +ER MS IPY+SAIGS+MY MLCTR ++ +A+S SRY
Sbjct: 925 KGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYALSATSRY 984
Query: 61 K 59
+
Sbjct: 985 Q 985
Score = 72.0 bits (175), Expect(2) = 3e-27
Identities = 31/51 (60%), Positives = 46/51 (90%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFL 231
F MKDLG+A+YILGI+++RDR +++GLSQ++YIDK+L+RF+MQ+S + FL
Sbjct: 878 FSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFL 928
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana]
emb|CAB80804.1| putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 80.1 bits (196), Expect(2) = 3e-27
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGF+P HGI+L CP T +ERE MS+IPY+SAIGS+MY ML TRP++ A+S+ SRY
Sbjct: 710 KGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACALSMTSRY 769
Query: 61 K 59
+
Sbjct: 770 Q 770
Score = 69.7 bits (169), Expect(2) = 3e-27
Identities = 30/51 (58%), Positives = 44/51 (86%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFL 231
F MKD+G+A+YILGI+++RDR NK++GLSQ +YIDK+L RF+M +S + F+
Sbjct: 663 FSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNMHDSKKGFI 713
>gb|ABF96975.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 562
Score = 77.8 bits (190), Expect(2) = 3e-27
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGFLP HGI+L CP+T +ER MS I Y+SAIGS+MY MLCTRP++ +A+S SRY
Sbjct: 368 KGFLPMSHGINLGKNQCPQTTDERNKMSVILYASAIGSIMYAMLCTRPDVSYALSATSRY 427
Query: 61 K 59
+
Sbjct: 428 Q 428
Score = 72.0 bits (175), Expect(2) = 3e-27
Identities = 31/51 (60%), Positives = 46/51 (90%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFL 231
F MKDLG+A+YILGI+++RDR +++GLSQ++YIDK+L+RF+MQ+S + FL
Sbjct: 321 FSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFL 371
>gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gb|AAS01915.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 547
Score = 77.8 bits (190), Expect(2) = 3e-27
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KGFLP HGI+L CP+T +ER MS I Y+SAIGS+MY MLCTRP++ +A+S SRY
Sbjct: 353 KGFLPMSHGINLGKNQCPQTTDERNKMSVILYASAIGSIMYAMLCTRPDVSYALSATSRY 412
Query: 61 K 59
+
Sbjct: 413 Q 413
Score = 72.0 bits (175), Expect(2) = 3e-27
Identities = 31/51 (60%), Positives = 46/51 (90%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFL 231
F MKDLG+A+YILGI+++RDR +++GLSQ++YIDK+L+RF+MQ+S + FL
Sbjct: 306 FSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFL 356
>ref|XP_017233167.1| PREDICTED: uncharacterized protein LOC108207215, partial [Daucus
carota subsp. sativus]
Length = 3860
Score = 81.6 bits (200), Expect(2) = 3e-27
Identities = 50/123 (40%), Positives = 59/123 (47%), Gaps = 44/123 (35%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KG LPFRHG++L CP T +E E M +PY+SA GSLMY MLCTRP+I FA+ + SRY
Sbjct: 1215 KGNLPFRHGVTLSKRQCPSTPKEIENMKAVPYASACGSLMYAMLCTRPDICFAVGMVSRY 1274
Query: 61 ----------------------KLY----------------------KDSRKSKSGCVFT 14
K Y KD RKS SGCVFT
Sbjct: 1275 QSNPGQEHWSAVKAILKYLRRTKEYMLVYKSSDLVPLGYTDSDFQTDKDKRKSTSGCVFT 1334
Query: 13 IDG 5
+ G
Sbjct: 1335 LGG 1337
Score = 81.6 bits (200), Expect(2) = 3e-27
Identities = 50/123 (40%), Positives = 59/123 (47%), Gaps = 44/123 (35%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KG LPFRHG++L CP T +E E M +PY+SA GSLMY MLCTRP+I FA+ + SRY
Sbjct: 2430 KGNLPFRHGVTLSKRQCPSTPKEIENMKAVPYASACGSLMYAMLCTRPDICFAVGMVSRY 2489
Query: 61 ----------------------KLY----------------------KDSRKSKSGCVFT 14
K Y KD RKS SGCVFT
Sbjct: 2490 QSNPGQEHWSAVKAILKYLRRTKEYMLVYKSSDLVPLGYTDSDFQTDKDKRKSTSGCVFT 2549
Query: 13 IDG 5
+ G
Sbjct: 2550 LGG 2552
Score = 81.6 bits (200), Expect(2) = 3e-27
Identities = 50/123 (40%), Positives = 59/123 (47%), Gaps = 44/123 (35%)
Frame = -1
Query: 241 KGFLPFRHGISLFSLMCPRTQEEREIMSRIPYSSAIGSLMYGMLCTRPNIYFAISIDSRY 62
KG LPFRHG++L CP T +E E M +PY+SA GSLMY MLCTRP+I FA+ + SRY
Sbjct: 3645 KGNLPFRHGVTLSKRQCPSTPKEIENMKAVPYASACGSLMYAMLCTRPDICFAVGMVSRY 3704
Query: 61 ----------------------KLY----------------------KDSRKSKSGCVFT 14
K Y KD RKS SGCVFT
Sbjct: 3705 QSNPGQEHWSAVKAILKYLRRTKEYMLVYKSSDLVPLGYTDSDFQTDKDKRKSTSGCVFT 3764
Query: 13 IDG 5
+ G
Sbjct: 3765 LGG 3767
Score = 67.8 bits (164), Expect(2) = 3e-27
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFLTFQ 222
F+MKDLG+A+YILGIKL RDR+ +ML LSQ YID +L RF+MQ+S + L F+
Sbjct: 1168 FEMKDLGEAAYILGIKLIRDRKKRMLALSQEPYIDDVLARFNMQDSKKGNLPFR 1221
Score = 67.8 bits (164), Expect(2) = 3e-27
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFLTFQ 222
F+MKDLG+A+YILGIKL RDR+ +ML LSQ YID +L RF+MQ+S + L F+
Sbjct: 2383 FEMKDLGEAAYILGIKLIRDRKKRMLALSQEPYIDDVLARFNMQDSKKGNLPFR 2436
Score = 67.8 bits (164), Expect(2) = 3e-27
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = -3
Query: 383 FDMKDLGQASYILGIKLHRDRRNKMLGLSQASYIDKILERFSMQNSIERFLTFQ 222
F+MKDLG+A+YILGIKL RDR+ +ML LSQ YID +L RF+MQ+S + L F+
Sbjct: 3598 FEMKDLGEAAYILGIKLIRDRKKRMLALSQEPYIDDVLARFNMQDSKKGNLPFR 3651