BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00020859
         (1182 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010932468.1| PREDICTED: replication factor C subunit 3 [E...   599   0.0  
ref|XP_020270226.1| LOW QUALITY PROTEIN: replication factor C su...   598   0.0  
ref|XP_008789193.1| PREDICTED: replication factor C subunit 3 [P...   593   0.0  
ref|XP_010243510.1| PREDICTED: replication factor C subunit 3 [N...   580   0.0  
ref|XP_020091014.1| replication factor C subunit 3 isoform X1 [A...   577   0.0  
gb|OAY73717.1| Replication factor C subunit 3 [Ananas comosus]        575   0.0  
ref|XP_015627208.1| PREDICTED: replication factor C subunit 3 [O...   573   0.0  
ref|XP_009409236.1| PREDICTED: replication factor C subunit 3 [M...   569   0.0  
ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] >g...   569   0.0  
ref|XP_020675154.1| replication factor C subunit 3 [Dendrobium c...   569   0.0  
gb|ACG35868.1| replication factor C subunit 3 [Zea mays]              568   0.0  
dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa...   568   0.0  
ref|XP_020599460.1| replication factor C subunit 3 [Phalaenopsis...   566   0.0  
ref|XP_003570529.1| PREDICTED: replication factor C subunit 3 [B...   566   0.0  
ref|XP_006647989.1| PREDICTED: replication factor C subunit 3 [O...   565   0.0  
gb|PKA61556.1| hypothetical protein AXF42_Ash018844 [Apostasia s...   564   0.0  
ref|XP_002454641.1| replication factor C subunit 3 [Sorghum bico...   563   0.0  
ref|XP_022772332.1| replication factor C subunit 3-like isoform ...   562   0.0  
ref|XP_004954087.1| replication factor C subunit 3 [Setaria ital...   562   0.0  
dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgar...   561   0.0  

>ref|XP_010932468.1| PREDICTED: replication factor C subunit 3 [Elaeis guineensis]
          Length = 356

 Score =  599 bits (1545), Expect = 0.0
 Identities = 309/347 (89%), Positives = 327/347 (94%), Gaps = 1/347 (0%)
 Frame = +1

Query: 88   MTETTSAMEIDG-APPPIPNKGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVDTID 264
            M E T+ MEIDG AP   PNKGK+ +  +DGK+A PWVEKYRPQSLADVAAHRDIVDTID
Sbjct: 1    MVEATAPMEIDGDAPLARPNKGKAALG-SDGKSA-PWVEKYRPQSLADVAAHRDIVDTID 58

Query: 265  RLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQ 444
            RLTNENRLPHLLLYGPPGTGKTSTILA+ARKLYG+QYHNMILELNASDDRGI+VVRQQIQ
Sbjct: 59   RLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQ 118

Query: 445  DFASARSLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP 624
            DFASARSL FGAK SVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP
Sbjct: 119  DFASARSLSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP 178

Query: 625  ALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQST 804
            ALQSRCTRFRFAPLD SHIRERL+YVIKAEGLDV ESGLTALVRLS+GDMRKALNILQST
Sbjct: 179  ALQSRCTRFRFAPLDASHIRERLEYVIKAEGLDVVESGLTALVRLSNGDMRKALNILQST 238

Query: 805  HMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVRE 984
            HMASQH+TEEAVYLCTGNPMPKDIEQIA+WLLNES+T SF+ ISD KM+KGLALVDIVRE
Sbjct: 239  HMASQHVTEEAVYLCTGNPMPKDIEQIAYWLLNESYTASFRYISDIKMKKGLALVDIVRE 298

Query: 985  VTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            VT+FVFKI+MPSDVRVKLI+DLADIEYRLS  CNDKLQLGSLISTFT
Sbjct: 299  VTMFVFKIQMPSDVRVKLINDLADIEYRLSFACNDKLQLGSLISTFT 345


>ref|XP_020270226.1| LOW QUALITY PROTEIN: replication factor C subunit 3 [Asparagus
            officinalis]
          Length = 358

 Score =  598 bits (1542), Expect = 0.0
 Identities = 310/349 (88%), Positives = 326/349 (93%), Gaps = 2/349 (0%)
 Frame = +1

Query: 88   MTETTSAMEIDGAPPPIPNKGKSVISPTDGKTAAPWVEKYRPQSLADVAAHR--DIVDTI 261
            MTETTS MEID APP IP+KGKSV SP+D K+A PWVE YRP+SL      +  DIVDTI
Sbjct: 1    MTETTSPMEIDAAPPSIPSKGKSVTSPSDRKSA-PWVEXYRPESLPPQPDQQKSDIVDTI 59

Query: 262  DRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQI 441
            DRLTNEN+LPHLLLYGPPGTGKTSTILA+ARKLYGSQYHNMILELNASDDRGI VVRQQI
Sbjct: 60   DRLTNENKLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIGVVRQQI 119

Query: 442  QDFASARSLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKII 621
            QDFASARSL FGA ++VKLVLLDEADAMTKDAQFALRRVIEK+TKSTRFALICNHVNKII
Sbjct: 120  QDFASARSLSFGAPVAVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII 179

Query: 622  PALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQS 801
            PALQSRCTRFRFAPLD S+IRERLQYVIKAEGLDVSESGLTALVRLS+GDMRKALNILQS
Sbjct: 180  PALQSRCTRFRFAPLDASNIRERLQYVIKAEGLDVSESGLTALVRLSNGDMRKALNILQS 239

Query: 802  THMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVR 981
            THMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFT+SFK ISDTKM+KGLALVDIVR
Sbjct: 240  THMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYISDTKMKKGLALVDIVR 299

Query: 982  EVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFTT 1128
            EVT+FVFKIKMPS VRVKLI+DLADIEYRLS  CNDKLQLGSLISTFTT
Sbjct: 300  EVTMFVFKIKMPSAVRVKLINDLADIEYRLSFACNDKLQLGSLISTFTT 348


>ref|XP_008789193.1| PREDICTED: replication factor C subunit 3 [Phoenix dactylifera]
          Length = 355

 Score =  593 bits (1530), Expect = 0.0
 Identities = 304/346 (87%), Positives = 326/346 (94%)
 Frame = +1

Query: 88   MTETTSAMEIDGAPPPIPNKGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVDTIDR 267
            M E T+ MEIDG  P   NK K+ ++ +DGK+A PWVEKYRPQSLADVAAHRDIVDTIDR
Sbjct: 1    MAEATAPMEIDGDAPARSNKDKAPLA-SDGKSA-PWVEKYRPQSLADVAAHRDIVDTIDR 58

Query: 268  LTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQD 447
            LTNENRLPHLLLYGPPGTGKTSTILA+ARKLYG+QY N+ILELNASDDRGI+VVRQQIQD
Sbjct: 59   LTNENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYRNLILELNASDDRGIDVVRQQIQD 118

Query: 448  FASARSLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA 627
            FASARSL FGAK SVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA
Sbjct: 119  FASARSLSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA 178

Query: 628  LQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTH 807
            LQSRCTRFRFAPLD +HIRERL+YVIKAEGLDV+ESGLTALVRLS+GDMRKALNILQSTH
Sbjct: 179  LQSRCTRFRFAPLDATHIRERLEYVIKAEGLDVAESGLTALVRLSNGDMRKALNILQSTH 238

Query: 808  MASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVREV 987
            MASQH+TEE+VYLCTGNPMPKDIEQIA+WLLNESFT SF+ ISD KMRKGLALVDIVREV
Sbjct: 239  MASQHVTEESVYLCTGNPMPKDIEQIAYWLLNESFTASFRYISDIKMRKGLALVDIVREV 298

Query: 988  TLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            T+FVFKI+MPSDVRVKLI++LADIEYRLS GCNDKLQLGSLISTFT
Sbjct: 299  TMFVFKIQMPSDVRVKLINNLADIEYRLSFGCNDKLQLGSLISTFT 344


>ref|XP_010243510.1| PREDICTED: replication factor C subunit 3 [Nelumbo nucifera]
          Length = 358

 Score =  580 bits (1495), Expect = 0.0
 Identities = 297/348 (85%), Positives = 322/348 (92%), Gaps = 2/348 (0%)
 Frame = +1

Query: 88   MTETTSAMEIDGAPPPIP-NKGKSVIS-PTDGKTAAPWVEKYRPQSLADVAAHRDIVDTI 261
            M ET S MEIDGA      NKGK+VI+ PTDGK A PWVEKYRPQSLADVAAHRDIVDTI
Sbjct: 1    MAETASPMEIDGADNRAKSNKGKNVIAVPTDGK-ATPWVEKYRPQSLADVAAHRDIVDTI 59

Query: 262  DRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQI 441
            DRLTNEN+LPHLLLYGPPGTGKTSTILA+ARKLYG+Q+HNMILELNASDDRGI+VVRQQI
Sbjct: 60   DRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGTQFHNMILELNASDDRGIDVVRQQI 119

Query: 442  QDFASARSLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKII 621
            QDFAS +S  FGAK SVKLVLLDEADAMTKDAQFALRRVIEK+TK+TRF LICNHVNKII
Sbjct: 120  QDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFTLICNHVNKII 179

Query: 622  PALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQS 801
            PALQSRCTRFRFAPLD SH+ +RL+YVI+AEGLDVSE GL ALVRLSSGDMRKALNILQS
Sbjct: 180  PALQSRCTRFRFAPLDASHVMDRLKYVIEAEGLDVSEGGLAALVRLSSGDMRKALNILQS 239

Query: 802  THMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVR 981
            THMASQHITEEAVYLCTGNPMPKDIEQI+FWLLNESF  S++ IS+ KM+KGLALVDIVR
Sbjct: 240  THMASQHITEEAVYLCTGNPMPKDIEQISFWLLNESFATSYRCISEMKMKKGLALVDIVR 299

Query: 982  EVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            EVT+F+FKIKMPSDVRV+LI+DLADIEYRLS GCNDKLQLGSLI++FT
Sbjct: 300  EVTMFIFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFT 347


>ref|XP_020091014.1| replication factor C subunit 3 isoform X1 [Ananas comosus]
          Length = 361

 Score =  577 bits (1487), Expect = 0.0
 Identities = 296/333 (88%), Positives = 313/333 (93%)
 Frame = +1

Query: 127  PPPIPNKGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRLPHLLLY 306
            PPP  +KGKS ++    K+A PWVEKYRP+SLADVAAHRDIVDTIDRLTNENRLPHLLLY
Sbjct: 19   PPPKLDKGKSPLAHDVAKSA-PWVEKYRPKSLADVAAHRDIVDTIDRLTNENRLPHLLLY 77

Query: 307  GPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFASARSLLFGAKL 486
            GPPGTGKTSTILA+ARKLYGSQY NMILELNASDDRGI VVRQQIQDFASARSL FGAK 
Sbjct: 78   GPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIGVVRQQIQDFASARSLSFGAKP 137

Query: 487  SVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRCTRFRFAPL 666
            SVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRCTRFRFAPL
Sbjct: 138  SVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRCTRFRFAPL 197

Query: 667  DVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMASQHITEEAVYL 846
            + +HIRERLQYVIKAEGLDV ESGLTALVRLS+GDMRKALNILQSTHMASQHITEEAVYL
Sbjct: 198  EATHIRERLQYVIKAEGLDVDESGLTALVRLSNGDMRKALNILQSTHMASQHITEEAVYL 257

Query: 847  CTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVREVTLFVFKIKMPSDV 1026
            CTGNPMPKDIEQIA+WLLNESFT SF+ ISD KMRKGLAL+DIVREVT+FVFKI+MPS+V
Sbjct: 258  CTGNPMPKDIEQIAYWLLNESFTTSFRYISDIKMRKGLALIDIVREVTMFVFKIQMPSNV 317

Query: 1027 RVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            +VKLI+DLADIEYRL   CNDKLQLGSLISTFT
Sbjct: 318  QVKLINDLADIEYRLCSACNDKLQLGSLISTFT 350


>gb|OAY73717.1| Replication factor C subunit 3 [Ananas comosus]
          Length = 361

 Score =  575 bits (1481), Expect = 0.0
 Identities = 294/333 (88%), Positives = 313/333 (93%)
 Frame = +1

Query: 127  PPPIPNKGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRLPHLLLY 306
            PPP  +KGKS ++    K+A PWVEKYRP+SLADVAAHRDIV+TIDRLTNENRLPHLLLY
Sbjct: 19   PPPKLDKGKSPLAHDVAKSA-PWVEKYRPKSLADVAAHRDIVNTIDRLTNENRLPHLLLY 77

Query: 307  GPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFASARSLLFGAKL 486
            GPPGTGKTSTILA+ARKLYGSQY NMILELNASDDRGI VVRQQIQDFASARSL FGAK 
Sbjct: 78   GPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIGVVRQQIQDFASARSLSFGAKP 137

Query: 487  SVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRCTRFRFAPL 666
            SVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRCTRFRFAPL
Sbjct: 138  SVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRCTRFRFAPL 197

Query: 667  DVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMASQHITEEAVYL 846
            + +HIRERLQYVIKAEGLDV ESGLTALVRLS+GDMRKALNILQSTHMASQHITEEAVYL
Sbjct: 198  EATHIRERLQYVIKAEGLDVDESGLTALVRLSNGDMRKALNILQSTHMASQHITEEAVYL 257

Query: 847  CTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVREVTLFVFKIKMPSDV 1026
            CTGNPMPKDIEQIA+WLLNESFT SF+ ISD KMRKGLAL+DIVREVT+FVFK++MPS+V
Sbjct: 258  CTGNPMPKDIEQIAYWLLNESFTTSFRYISDIKMRKGLALIDIVREVTMFVFKVQMPSNV 317

Query: 1027 RVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            +VKLI+DLADIEYRL   CNDKLQLGSLISTFT
Sbjct: 318  QVKLINDLADIEYRLCSACNDKLQLGSLISTFT 350


>ref|XP_015627208.1| PREDICTED: replication factor C subunit 3 [Oryza sativa Japonica
            Group]
 sp|Q6YZ54.1|RFC3_ORYSJ RecName: Full=Replication factor C subunit 3; Short=OsRFC3; AltName:
            Full=Activator 1 subunit 3
 dbj|BAD17147.1| putative replication factor C 36kDa subunit [Oryza sativa Japonica
            Group]
 dbj|BAD17365.1| putative replication factor C 36kDa subunit [Oryza sativa Japonica
            Group]
 dbj|BAF10194.1| Os02g0775200 [Oryza sativa Japonica Group]
 dbj|BAG91711.1| unnamed protein product [Oryza sativa Japonica Group]
 gb|EEC74095.1| hypothetical protein OsI_09136 [Oryza sativa Indica Group]
 dbj|BAS81161.1| Os02g0775200 [Oryza sativa Japonica Group]
          Length = 361

 Score =  573 bits (1477), Expect = 0.0
 Identities = 290/341 (85%), Positives = 316/341 (92%), Gaps = 2/341 (0%)
 Frame = +1

Query: 109  MEIDGAPPP--IPNKGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNEN 282
            M+ID A PP     KGK+ +S T G  AAPWVEKYRPQSL DVAAHRDIVDTIDRLTNEN
Sbjct: 10   MDIDAAAPPPGAAAKGKAPLSSTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTIDRLTNEN 69

Query: 283  RLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFASAR 462
            RLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGI+VVRQQIQDFASAR
Sbjct: 70   RLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQDFASAR 129

Query: 463  SLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRC 642
            SL FGAK SVK+VLLDEADAMTKDAQFALRRVIEKHT+STRFALICNHVNKIIPALQSRC
Sbjct: 130  SLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRC 189

Query: 643  TRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMASQH 822
            TRFRFAPLD +H+RERL+++I++EGLDV + GLTALVRLS+GDMRKALNILQSTHMAS+ 
Sbjct: 190  TRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTHMASKQ 249

Query: 823  ITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVREVTLFVF 1002
            ITEEAVYLCTGNPMPKDIEQIA+WLLNESF+ SFK ISD KMRKGLALVDI+REVT+FVF
Sbjct: 250  ITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCISDMKMRKGLALVDIIREVTMFVF 309

Query: 1003 KIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            KI+MPSDVR+KLI+DLADIEYRLS  CNDKLQLG+LISTFT
Sbjct: 310  KIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFT 350


>ref|XP_009409236.1| PREDICTED: replication factor C subunit 3 [Musa acuminata subsp.
            malaccensis]
          Length = 357

 Score =  569 bits (1467), Expect = 0.0
 Identities = 292/348 (83%), Positives = 319/348 (91%), Gaps = 2/348 (0%)
 Frame = +1

Query: 88   MTETTSAMEIDGAPPP--IPNKGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVDTI 261
            M + ++ MEID   P   +PNKGK  ++ +D K+  PWVEKYRPQSLADVAAHRDI+DTI
Sbjct: 1    MADASALMEIDEDAPDSSLPNKGKIALA-SDPKSV-PWVEKYRPQSLADVAAHRDIIDTI 58

Query: 262  DRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQI 441
            DRLT+ENRLPHLLLYGPPGTGKTSTILA+ARKLYG QY NMILELNASDDRGI+VVRQQI
Sbjct: 59   DRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGMQYKNMILELNASDDRGIDVVRQQI 118

Query: 442  QDFASARSLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKII 621
            QDFASARSL FG K +VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKII
Sbjct: 119  QDFASARSLSFGPKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKII 178

Query: 622  PALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQS 801
            PALQSRCTRFRFAPLD S+IRER ++VIKAEGLDV+ESGLTALVRLSSGDMRKALNILQS
Sbjct: 179  PALQSRCTRFRFAPLDSSNIRERTEHVIKAEGLDVTESGLTALVRLSSGDMRKALNILQS 238

Query: 802  THMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVR 981
            THMAS H+T+EAVYLCTGNPMPKDIEQIA+WLLNESFT +F+ ISD KM+KGLAL+DIVR
Sbjct: 239  THMASPHVTDEAVYLCTGNPMPKDIEQIAYWLLNESFTAAFRYISDVKMKKGLALIDIVR 298

Query: 982  EVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            EVT+FVFKIKMPSD+RVKLI+DLADIEYRL   CNDKLQLGSLISTFT
Sbjct: 299  EVTMFVFKIKMPSDIRVKLINDLADIEYRLCFACNDKLQLGSLISTFT 346


>ref|NP_001136580.1| replication factor C subunit 3 [Zea mays]
 gb|ACF82215.1| unknown [Zea mays]
 gb|AQK75338.1| Replication factor C subunit 5 [Zea mays]
          Length = 362

 Score =  569 bits (1467), Expect = 0.0
 Identities = 294/350 (84%), Positives = 316/350 (90%), Gaps = 5/350 (1%)
 Frame = +1

Query: 91   TETTSAMEIDGAPPPIPN-----KGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVD 255
            T   + M+ID A PP P      KGK+ +S   G  AAPWVEKYRPQSLADVAAHRDIVD
Sbjct: 4    TAAAALMDIDAAAPPPPPPGAAAKGKAPLSA--GGRAAPWVEKYRPQSLADVAAHRDIVD 61

Query: 256  TIDRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQ 435
            TIDRLTNENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGI+VVRQ
Sbjct: 62   TIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQ 121

Query: 436  QIQDFASARSLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNK 615
            QIQDFA ARSL FGA+ SVKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNK
Sbjct: 122  QIQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNK 181

Query: 616  IIPALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNIL 795
            IIPALQSRCTRFRFAPLD SH+RERLQ++IK+EGL V + GLTALVRLS+GDMRKALNIL
Sbjct: 182  IIPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNIL 241

Query: 796  QSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDI 975
            QSTHMASQ ITEEAVYLCTGNPMPKDIEQIAFWLLNE F+ SFK ISD KMRKGLALVDI
Sbjct: 242  QSTHMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVDI 301

Query: 976  VREVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            +REVT+FVFKI+MPSDVRVKLI+DLADIEYRLS  CNDKLQLG+LISTFT
Sbjct: 302  IREVTMFVFKIQMPSDVRVKLINDLADIEYRLSFACNDKLQLGALISTFT 351


>ref|XP_020675154.1| replication factor C subunit 3 [Dendrobium catenatum]
 ref|XP_020675163.1| replication factor C subunit 3 [Dendrobium catenatum]
          Length = 357

 Score =  569 bits (1466), Expect = 0.0
 Identities = 290/347 (83%), Positives = 311/347 (89%), Gaps = 1/347 (0%)
 Frame = +1

Query: 88   MTETTSAMEIDGAPPPIPNKGKSV-ISPTDGKTAAPWVEKYRPQSLADVAAHRDIVDTID 264
            M E T  +++D APP  PNKGKS   S  +G  + PWVEKYRPQSLADVAAHRDIVDTID
Sbjct: 1    MAEATMEIDVD-APPSRPNKGKSPSASVVNGVKSGPWVEKYRPQSLADVAAHRDIVDTID 59

Query: 265  RLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQ 444
            RLTNEN+LPHLLLYGPPGTGKTSTILALARKLYG QY NMILELNASDDRGI+VVRQQI+
Sbjct: 60   RLTNENKLPHLLLYGPPGTGKTSTILALARKLYGGQYQNMILELNASDDRGIDVVRQQIK 119

Query: 445  DFASARSLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP 624
            DFA ARSL FG K SVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP
Sbjct: 120  DFAGARSLSFGVKFSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP 179

Query: 625  ALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQST 804
            ALQSRCTRFRFAPLD +HI+ERLQYV+ AEGLDV ESG  ALVRLS+GDMRKALNILQST
Sbjct: 180  ALQSRCTRFRFAPLDAAHIKERLQYVVAAEGLDVDESGFAALVRLSNGDMRKALNILQST 239

Query: 805  HMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVRE 984
             MA Q +TEEAVYLCTGNPMPKDIEQIA+WLLNE FT SF+ ISD KMRKGLALVDI+RE
Sbjct: 240  QMAYQRVTEEAVYLCTGNPMPKDIEQIAYWLLNEPFTASFRYISDIKMRKGLALVDIIRE 299

Query: 985  VTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            VT+FVFKI M SD+R+KLI+DLADIEYRLS GCNDKLQLG+LISTFT
Sbjct: 300  VTMFVFKIHMSSDIRIKLINDLADIEYRLSFGCNDKLQLGALISTFT 346


>gb|ACG35868.1| replication factor C subunit 3 [Zea mays]
          Length = 362

 Score =  568 bits (1465), Expect = 0.0
 Identities = 293/350 (83%), Positives = 317/350 (90%), Gaps = 5/350 (1%)
 Frame = +1

Query: 91   TETTSAMEIDGAPPPIPN-----KGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVD 255
            T   + M+ID A PP P      KGK+++S   G  AAPWVEKYRPQSLADVAAHRDIVD
Sbjct: 4    TAAAAPMDIDAAAPPPPPPGAAAKGKALLSA--GGRAAPWVEKYRPQSLADVAAHRDIVD 61

Query: 256  TIDRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQ 435
            TIDRLTNENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGI+VVRQ
Sbjct: 62   TIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQ 121

Query: 436  QIQDFASARSLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNK 615
            QIQDFA ARSL FGA+ SVKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNK
Sbjct: 122  QIQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNK 181

Query: 616  IIPALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNIL 795
            IIPALQSRCTRFRFAPLD SH+RERLQ++IK+EGL V + GLTALVRLS+GDMRKALNIL
Sbjct: 182  IIPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNIL 241

Query: 796  QSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDI 975
            QSTHMASQ ITEEAVYLCTGNPMPKDIEQIAFWLLNE F+ SFK ISD KMRKGLALVDI
Sbjct: 242  QSTHMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVDI 301

Query: 976  VREVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            +REVT+FVFKI+MPSDVRVKLI++LADIEYRLS  CNDKLQLG+LISTFT
Sbjct: 302  IREVTMFVFKIQMPSDVRVKLINNLADIEYRLSFACNDKLQLGALISTFT 351


>dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa Japonica Group]
          Length = 367

 Score =  568 bits (1465), Expect = 0.0
 Identities = 291/347 (83%), Positives = 317/347 (91%), Gaps = 8/347 (2%)
 Frame = +1

Query: 109  MEIDGAPPP--IPNKGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNEN 282
            M+ID A PP     KGK+ +S T G  AAPWVEKYRPQSL DVAAHRDIVDTIDRLTNEN
Sbjct: 10   MDIDAAAPPPGAAAKGKAPLSSTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTIDRLTNEN 69

Query: 283  RLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFASAR 462
            RLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGI+VVRQQIQDFASAR
Sbjct: 70   RLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQDFASAR 129

Query: 463  SLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRC 642
            SL FGAK SVK+VLLDEADAMTKDAQFALRRVIEKHT+STRFALICNHVNKIIPALQSRC
Sbjct: 130  SLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRC 189

Query: 643  TRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMASQH 822
            TRFRFAPLD +H+RERL+++I++EGLDV + GLTALVRLS+GDMRKALNILQSTHMAS+ 
Sbjct: 190  TRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTHMASKQ 249

Query: 823  ITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFK------SISDTKMRKGLALVDIVRE 984
            ITEEAVYLCTGNPMPKDIEQIA+WLLNESF+ SFK      SISD KMRKGLALVDI+RE
Sbjct: 250  ITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCILNYQSISDMKMRKGLALVDIIRE 309

Query: 985  VTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            VT+FVFKI+MPSDVR+KLI+DLADIEYRLS  CNDKLQLG+LISTFT
Sbjct: 310  VTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFT 356


>ref|XP_020599460.1| replication factor C subunit 3 [Phalaenopsis equestris]
          Length = 357

 Score =  567 bits (1460), Expect = 0.0
 Identities = 289/347 (83%), Positives = 309/347 (89%), Gaps = 1/347 (0%)
 Frame = +1

Query: 88   MTETTSAMEIDGAPPPIPNKGKSVISPTD-GKTAAPWVEKYRPQSLADVAAHRDIVDTID 264
            M E T  +++D  P    NKGK+     D G  + PWVEKYRPQSLADVAAHRDIVDTID
Sbjct: 1    MAEATMEIDVDALPSK-SNKGKTPSVAADKGARSGPWVEKYRPQSLADVAAHRDIVDTID 59

Query: 265  RLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQ 444
            RLTNEN+LPHLLLYGPPGTGKTSTILALARKLYG QY NMILELNASDDRGI+VVRQQIQ
Sbjct: 60   RLTNENKLPHLLLYGPPGTGKTSTILALARKLYGGQYKNMILELNASDDRGIDVVRQQIQ 119

Query: 445  DFASARSLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP 624
            DFA A SL FGAK SVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP
Sbjct: 120  DFAGAMSLSFGAKFSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP 179

Query: 625  ALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQST 804
            ALQSRCTRFRFAPLD +HI+ERLQYV+ AEGLDV ESG  ALVRLS+GDMRKALNILQST
Sbjct: 180  ALQSRCTRFRFAPLDAAHIKERLQYVVTAEGLDVDESGFAALVRLSNGDMRKALNILQST 239

Query: 805  HMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVRE 984
             MA QH+TEEAVYLCTGNPMPKDIEQIA+WLLNE F  SF+ ISD KMRKGLALVDI+RE
Sbjct: 240  QMAFQHVTEEAVYLCTGNPMPKDIEQIAYWLLNEPFIASFRFISDIKMRKGLALVDIIRE 299

Query: 985  VTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            VTLFVFKI+MPSD+R+KLI+DLADIEYRLS GCNDKLQLG+LISTFT
Sbjct: 300  VTLFVFKIQMPSDIRIKLINDLADIEYRLSFGCNDKLQLGALISTFT 346


>ref|XP_003570529.1| PREDICTED: replication factor C subunit 3 [Brachypodium distachyon]
 gb|KQK01663.1| hypothetical protein BRADI_3g57410v3 [Brachypodium distachyon]
 gb|PNT69543.1| hypothetical protein BRADI_3g57410v3 [Brachypodium distachyon]
          Length = 358

 Score =  567 bits (1460), Expect = 0.0
 Identities = 288/344 (83%), Positives = 315/344 (91%)
 Frame = +1

Query: 97   TTSAMEIDGAPPPIPNKGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVDTIDRLTN 276
            TT+ M+ID A PP  +KGK+ +S      ++PWVEKYRPQSLADVAAHRDIVDTIDRLT+
Sbjct: 6    TTAPMDIDAAAPP-HSKGKAPLSAAAAVRSSPWVEKYRPQSLADVAAHRDIVDTIDRLTD 64

Query: 277  ENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFAS 456
            ENRLPHLLLYGPPGTGKTSTILA+ARK+YGSQY NMILELNASD+RGI VVRQQIQDFAS
Sbjct: 65   ENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQDFAS 124

Query: 457  ARSLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQS 636
            A SL FGAK +VKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNKIIPALQS
Sbjct: 125  AHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQS 184

Query: 637  RCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMAS 816
            RCTRFRFAPLD SH+ ERLQ++IK+EGLDV E GLTALVRLSSGDMRKALNILQSTHMAS
Sbjct: 185  RCTRFRFAPLDGSHVSERLQHIIKSEGLDVDEGGLTALVRLSSGDMRKALNILQSTHMAS 244

Query: 817  QHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVREVTLF 996
            Q ITEEAVYLCTGNPMPKDIEQIAFWLLNE F+ SFK ISD KMRKGLAL+DI+REVT+F
Sbjct: 245  QQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALIDIIREVTMF 304

Query: 997  VFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFTT 1128
            VFKIKMP +VRVKLI+DLADIEYRL+  CNDKLQLG+LISTFT+
Sbjct: 305  VFKIKMPCNVRVKLINDLADIEYRLTFACNDKLQLGALISTFTS 348


>ref|XP_006647989.1| PREDICTED: replication factor C subunit 3 [Oryza brachyantha]
          Length = 362

 Score =  565 bits (1455), Expect = 0.0
 Identities = 289/348 (83%), Positives = 314/348 (90%), Gaps = 3/348 (0%)
 Frame = +1

Query: 91   TETTSAMEIDGAPPPIPN---KGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVDTI 261
            T   + M+ID A PP P    K K+ +S T G  AAPWVEKYRPQSL DVAAHRDIVDTI
Sbjct: 5    TTAATPMDIDAAAPP-PGAYAKDKAPLSTTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTI 63

Query: 262  DRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQI 441
            DRLTNENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGI+VVRQQI
Sbjct: 64   DRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQI 123

Query: 442  QDFASARSLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKII 621
            QDFASARSL FGAK SVK+VLLDEADAMTKDAQFALRRVIEKHT+STRFALICNHVNKII
Sbjct: 124  QDFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKII 183

Query: 622  PALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQS 801
            PALQSRCTRFRFAPLD +H+R+RLQ++I +EGLDV + GLTALVRLS+GDMRKALNILQS
Sbjct: 184  PALQSRCTRFRFAPLDGTHVRDRLQHIILSEGLDVDDGGLTALVRLSNGDMRKALNILQS 243

Query: 802  THMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVR 981
            THMAS+ ITEEAVYLCTGNPM KDIEQIAFWLLNE F+ SFK ISD KMRKGLALVDI+R
Sbjct: 244  THMASKQITEEAVYLCTGNPMQKDIEQIAFWLLNEPFSTSFKCISDMKMRKGLALVDIIR 303

Query: 982  EVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            EVT+FVFKI+MPSDVR+KLI+DLADIEYRL   CNDKLQLG+LISTFT
Sbjct: 304  EVTMFVFKIQMPSDVRIKLINDLADIEYRLCFACNDKLQLGALISTFT 351


>gb|PKA61556.1| hypothetical protein AXF42_Ash018844 [Apostasia shenzhenica]
          Length = 357

 Score =  564 bits (1453), Expect = 0.0
 Identities = 289/342 (84%), Positives = 308/342 (90%), Gaps = 2/342 (0%)
 Frame = +1

Query: 109  MEIDG-APPPIPNKGKS-VISPTDGKTAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNEN 282
            MEIDG APP   +KGKS  I+  +   +APWVEKYRPQSLADVAAHRDIVDTIDRLTNEN
Sbjct: 6    MEIDGQAPPARFDKGKSPTIAGGEFAKSAPWVEKYRPQSLADVAAHRDIVDTIDRLTNEN 65

Query: 283  RLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFASAR 462
            +LPHLLLYGPPGTGKTSTILALARKLYG+QYHNMILELNASDDRGI VVRQQIQDFA AR
Sbjct: 66   KLPHLLLYGPPGTGKTSTILALARKLYGAQYHNMILELNASDDRGIEVVRQQIQDFAGAR 125

Query: 463  SLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRC 642
            SL FGAK  VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRC
Sbjct: 126  SLSFGAKSFVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRC 185

Query: 643  TRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMASQH 822
            TRFRFAPLD  HIRERL YVIK EG+DV + GL ALVRLS+GDMRKALNILQST MAS H
Sbjct: 186  TRFRFAPLDADHIRERLNYVIKTEGVDVDKGGLAALVRLSNGDMRKALNILQSTQMASHH 245

Query: 823  ITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVREVTLFVF 1002
            +TEEAVYLCTGNPMPKDIEQI +WLLNE FT SF+ ISD K RKGLALVDI+REVT+F F
Sbjct: 246  VTEEAVYLCTGNPMPKDIEQITYWLLNEPFTASFRYISDIKTRKGLALVDIIREVTMFAF 305

Query: 1003 KIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFTT 1128
            KI MPSDVR+KL++DLADIEYRLS GCNDKLQLG+LISTFT+
Sbjct: 306  KICMPSDVRIKLVNDLADIEYRLSFGCNDKLQLGALISTFTS 347


>ref|XP_002454641.1| replication factor C subunit 3 [Sorghum bicolor]
 gb|EES07617.1| hypothetical protein SORBI_3004G315500 [Sorghum bicolor]
          Length = 362

 Score =  563 bits (1452), Expect = 0.0
 Identities = 291/350 (83%), Positives = 314/350 (89%), Gaps = 5/350 (1%)
 Frame = +1

Query: 91   TETTSAMEIDGAPPPIPN-----KGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVD 255
            T   + M+ID A PP P      KGK+ +S   G  AAPWVEKYRPQSLADVAAHRDIVD
Sbjct: 4    TAAAAPMDIDAAAPPPPPPGAAAKGKAPLSA--GGRAAPWVEKYRPQSLADVAAHRDIVD 61

Query: 256  TIDRLTNENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQ 435
            TIDRLTNENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGI+VVRQ
Sbjct: 62   TIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQ 121

Query: 436  QIQDFASARSLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNK 615
            QIQDFA ARSL FGA+ SVKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNK
Sbjct: 122  QIQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNK 181

Query: 616  IIPALQSRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNIL 795
            IIPALQSRCTRFRFAPLD SH+RERLQ++IK+EGL V E GLTALVRLS+GDMRKALNIL
Sbjct: 182  IIPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDEGGLTALVRLSNGDMRKALNIL 241

Query: 796  QSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDI 975
            QSTHMASQ ITEEAVYLCTGNPMP DIE+IAFWLLNE F+ SFK ISD KMRKGLALVDI
Sbjct: 242  QSTHMASQQITEEAVYLCTGNPMPNDIERIAFWLLNEPFSTSFKHISDMKMRKGLALVDI 301

Query: 976  VREVTLFVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            +REVT+FVFKI+MPSDVRVKLI++LADIEYRLS  CNDKLQLG+LIS FT
Sbjct: 302  IREVTMFVFKIEMPSDVRVKLINNLADIEYRLSFACNDKLQLGALISAFT 351


>ref|XP_022772332.1| replication factor C subunit 3-like isoform X1 [Durio zibethinus]
          Length = 363

 Score =  562 bits (1449), Expect = 0.0
 Identities = 283/328 (86%), Positives = 310/328 (94%)
 Frame = +1

Query: 142  NKGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRLPHLLLYGPPGT 321
            +KGKSV++ TD K A PWVEKYRPQSLADVAAHRDIVDTIDRLT+ENRLPHLLLYGPPGT
Sbjct: 26   SKGKSVVTATDSK-ATPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGT 84

Query: 322  GKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFASARSLLFGAKLSVKLV 501
            GKTSTILA+ARKLYG+QYHNMILELNASDDRGI+VVRQQIQDFAS +S  FGAKLSVKL+
Sbjct: 85   GKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKLSVKLI 144

Query: 502  LLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDVSHI 681
            LLDEADAMTKDAQFALRRVIEK+TK+TRFALICNHVNKIIPALQSRCTRFRFAPLD  H+
Sbjct: 145  LLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDPIHV 204

Query: 682  RERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMASQHITEEAVYLCTGNP 861
             ERL++VI+AEGLDVS+SGL ALVRLS+GDMRKALNILQSTHMAS+ ITEEAVYLCTGNP
Sbjct: 205  TERLKHVIEAEGLDVSDSGLAALVRLSNGDMRKALNILQSTHMASRQITEEAVYLCTGNP 264

Query: 862  MPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVREVTLFVFKIKMPSDVRVKLI 1041
            +PKDIEQI++WLLNESF ESF  IS+ K RKGLAL+DIVREVT+FVFKIKMPSDVRV+LI
Sbjct: 265  LPKDIEQISYWLLNESFAESFTRISEIKTRKGLALIDIVREVTMFVFKIKMPSDVRVQLI 324

Query: 1042 SDLADIEYRLSLGCNDKLQLGSLISTFT 1125
            +DLADIEYRLS GCNDKLQLGSLI+TFT
Sbjct: 325  NDLADIEYRLSFGCNDKLQLGSLIATFT 352


>ref|XP_004954087.1| replication factor C subunit 3 [Setaria italica]
 gb|KQL31737.1| hypothetical protein SETIT_017595mg [Setaria italica]
          Length = 361

 Score =  562 bits (1448), Expect = 0.0
 Identities = 289/345 (83%), Positives = 313/345 (90%), Gaps = 5/345 (1%)
 Frame = +1

Query: 109  MEIDGAPPPIPN-----KGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVDTIDRLT 273
            M++D A PP P      KGK+ ++      AAPWVEKYRPQSLADVAAHRDIVDTIDRLT
Sbjct: 10   MDVDAAAPPPPPAGAAAKGKAPLNAPG--RAAPWVEKYRPQSLADVAAHRDIVDTIDRLT 67

Query: 274  NENRLPHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFA 453
            NENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGI+VVR QIQDFA
Sbjct: 68   NENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRLQIQDFA 127

Query: 454  SARSLLFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQ 633
             ARSL FGA+ SVKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNKIIPALQ
Sbjct: 128  GARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQ 187

Query: 634  SRCTRFRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMA 813
            SRCTRFRFAPLD SH+RERLQ++IK+EGL V E GLTALVRLS+GDMRKALNILQSTHMA
Sbjct: 188  SRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDEGGLTALVRLSNGDMRKALNILQSTHMA 247

Query: 814  SQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVREVTL 993
            SQ ITEEAVYLCTGNPMPKDIE+IAFWLLNE F+ SFK ISD KMRKGLALVDI+REVT+
Sbjct: 248  SQQITEEAVYLCTGNPMPKDIEEIAFWLLNEPFSTSFKHISDMKMRKGLALVDIIREVTM 307

Query: 994  FVFKIKMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFTT 1128
            FVFKI+MPSDVRVKLI+DLADIEYRLS  CNDKLQLG+LISTFT+
Sbjct: 308  FVFKIQMPSDVRVKLINDLADIEYRLSFACNDKLQLGALISTFTS 352


>dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgare]
 dbj|BAJ97796.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 359

 Score =  561 bits (1446), Expect = 0.0
 Identities = 283/340 (83%), Positives = 311/340 (91%)
 Frame = +1

Query: 109  MEIDGAPPPIPNKGKSVISPTDGKTAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRL 288
            M+IDGA  P   KGK+ +S      ++PWVEKYRPQSLADVAAHRDIVDTIDRLT+ENRL
Sbjct: 10   MDIDGAAAPPAFKGKAPLSAAAAVKSSPWVEKYRPQSLADVAAHRDIVDTIDRLTDENRL 69

Query: 289  PHLLLYGPPGTGKTSTILALARKLYGSQYHNMILELNASDDRGINVVRQQIQDFASARSL 468
            PHLLLYGPPGTGKTSTILA+ARK+YGSQY NMILELNASD+RGI VVRQQIQDFASA SL
Sbjct: 70   PHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQDFASAHSL 129

Query: 469  LFGAKLSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRCTR 648
             FGAK +VKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNKIIPALQSRCTR
Sbjct: 130  SFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSRCTR 189

Query: 649  FRFAPLDVSHIRERLQYVIKAEGLDVSESGLTALVRLSSGDMRKALNILQSTHMASQHIT 828
            FRFAPLD SH+ ERL+++IK+EGLDV E GL+ALVRLS+GDMRK+LNILQSTHMASQ IT
Sbjct: 190  FRFAPLDGSHVSERLRHIIKSEGLDVDEGGLSALVRLSNGDMRKSLNILQSTHMASQQIT 249

Query: 829  EEAVYLCTGNPMPKDIEQIAFWLLNESFTESFKSISDTKMRKGLALVDIVREVTLFVFKI 1008
            EEAVYLCTGNPMPKDIEQIAFWLLNE F+ SFK I+D KMRKGLAL+DI+REVT+FVFKI
Sbjct: 250  EEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKHIADMKMRKGLALIDIIREVTMFVFKI 309

Query: 1009 KMPSDVRVKLISDLADIEYRLSLGCNDKLQLGSLISTFTT 1128
            KMPS VRVKLI+DLADIEYRL+  CNDKLQLG+LISTFTT
Sbjct: 310  KMPSSVRVKLINDLADIEYRLTFACNDKLQLGALISTFTT 349