BLASTX nr result

ID: Ophiopogon23_contig00020087 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00020087
         (486 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK75650.1| uncharacterized protein A4U43_C03F19110 [Asparagu...    80   2e-14
ref|XP_020257494.1| zinc finger CCCH domain-containing protein 6...    80   2e-14
ref|XP_020257493.1| zinc finger CCCH domain-containing protein 6...    80   3e-14

>gb|ONK75650.1| uncharacterized protein A4U43_C03F19110 [Asparagus officinalis]
          Length = 345

 Score = 79.7 bits (195), Expect = 2e-14
 Identities = 54/155 (34%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
 Frame = +1

Query: 34  TTVEPPINKRKKRSECAAVNKKQDGAKPSSNFH----TKKRKAAQTTKPAPSATNHQAKL 201
           TT  PP  K KK ++     KKQ+  K + ++      K RK A+      S+T+   K+
Sbjct: 155 TTKAPPNKKCKKDTQLVTEKKKQNFVKKAGSYSRDGKAKMRKTAKKRNTGSSSTHCNTKI 214

Query: 202 REVAKTRNSESFATHYEQSSYHPNGYQREYPYSQIHLHNNYSRPPVEVFGGSYMGVPQAY 381
            EVA TRN  S  +H EQ SY P     ++ Y Q + +N Y+    E F  +Y       
Sbjct: 215 SEVANTRNPGSSFSHPEQYSYLP--IHTDHYYPQSNPYNIYNHKSAEAFHRNY------- 265

Query: 382 PRMHHIPSYNRGYSSSVAVASHGHMQHGYNTGYPP 486
              +   S+N G SSS A   + HM HGYNTG+ P
Sbjct: 266 ---NQTSSHNFGISSSAARIPNVHMLHGYNTGFVP 297


>ref|XP_020257494.1| zinc finger CCCH domain-containing protein 62-like isoform X2
           [Asparagus officinalis]
          Length = 444

 Score = 79.7 bits (195), Expect = 2e-14
 Identities = 54/155 (34%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
 Frame = +1

Query: 34  TTVEPPINKRKKRSECAAVNKKQDGAKPSSNFH----TKKRKAAQTTKPAPSATNHQAKL 201
           TT  PP  K KK ++     KKQ+  K + ++      K RK A+      S+T+   K+
Sbjct: 254 TTKAPPNKKCKKDTQLVTEKKKQNFVKKAGSYSRDGKAKMRKTAKKRNTGSSSTHCNTKI 313

Query: 202 REVAKTRNSESFATHYEQSSYHPNGYQREYPYSQIHLHNNYSRPPVEVFGGSYMGVPQAY 381
            EVA TRN  S  +H EQ SY P     ++ Y Q + +N Y+    E F  +Y       
Sbjct: 314 SEVANTRNPGSSFSHPEQYSYLP--IHTDHYYPQSNPYNIYNHKSAEAFHRNY------- 364

Query: 382 PRMHHIPSYNRGYSSSVAVASHGHMQHGYNTGYPP 486
              +   S+N G SSS A   + HM HGYNTG+ P
Sbjct: 365 ---NQTSSHNFGISSSAARIPNVHMLHGYNTGFVP 396


>ref|XP_020257493.1| zinc finger CCCH domain-containing protein 62-like isoform X1
           [Asparagus officinalis]
          Length = 477

 Score = 79.7 bits (195), Expect = 3e-14
 Identities = 54/155 (34%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
 Frame = +1

Query: 34  TTVEPPINKRKKRSECAAVNKKQDGAKPSSNFH----TKKRKAAQTTKPAPSATNHQAKL 201
           TT  PP  K KK ++     KKQ+  K + ++      K RK A+      S+T+   K+
Sbjct: 287 TTKAPPNKKCKKDTQLVTEKKKQNFVKKAGSYSRDGKAKMRKTAKKRNTGSSSTHCNTKI 346

Query: 202 REVAKTRNSESFATHYEQSSYHPNGYQREYPYSQIHLHNNYSRPPVEVFGGSYMGVPQAY 381
            EVA TRN  S  +H EQ SY P     ++ Y Q + +N Y+    E F  +Y       
Sbjct: 347 SEVANTRNPGSSFSHPEQYSYLP--IHTDHYYPQSNPYNIYNHKSAEAFHRNY------- 397

Query: 382 PRMHHIPSYNRGYSSSVAVASHGHMQHGYNTGYPP 486
              +   S+N G SSS A   + HM HGYNTG+ P
Sbjct: 398 ---NQTSSHNFGISSSAARIPNVHMLHGYNTGFVP 429


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