BLASTX nr result
ID: Ophiopogon23_contig00019901
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00019901
(1080 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus... 130 1e-29
emb|CDP17738.1| unnamed protein product [Coffea canephora] 115 3e-24
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 114 5e-24
gb|ONK81628.1| uncharacterized protein A4U43_C01F31260 [Asparagu... 109 5e-24
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 113 9e-24
gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo... 108 8e-23
gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposo... 107 2e-22
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 108 5e-22
gb|PHU12529.1| hypothetical protein BC332_19459 [Capsicum chinense] 106 7e-22
gb|KYP39598.1| Retrovirus-related Pol polyprotein from transposo... 105 8e-22
gb|KYP67484.1| Retrovirus-related Pol polyprotein from transposo... 107 1e-21
gb|KYP47563.1| Retrovirus-related Pol polyprotein from transposo... 103 1e-21
gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposo... 106 1e-21
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo... 106 2e-21
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 107 2e-21
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 107 2e-21
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 107 2e-21
gb|PON45664.1| Zinc finger, CCHC-type, partial [Parasponia ander... 100 4e-21
gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo... 105 5e-21
gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo... 103 6e-21
>gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus officinalis]
Length = 631
Score = 130 bits (327), Expect = 1e-29
Identities = 71/161 (44%), Positives = 103/161 (63%), Gaps = 3/161 (1%)
Frame = -2
Query: 476 NSGRSLKSKPKFKRGRSVKDQCAYCKMFGHWKKDCHKLIEKN--RKKSIRPLEVCITEEN 303
N GRS KS+ + K+QCA+CK HWK+DC KL EK +KK + EV + + +
Sbjct: 194 NRGRS-KSR---SHHQLAKNQCAFCKEQEHWKRDCPKLKEKENCKKKGPKANEVNVAKGD 249
Query: 302 GVGDXXXXXXXXXXSICHSDVSDWIWDTEVTCHICPKREWFASFEKLDG-VVVVGDDHAC 126
D + H DV DW+ D+ T H+ P+R+WFASFEK+DG VVV+G+D C
Sbjct: 250 D-SDDSCFSLLITPEVNHVDVLDWMLDSGATYHVTPRRDWFASFEKVDGGVVVMGNDQFC 308
Query: 125 RLVGVGTIRVKMYDGMVRELHGVRYVPSARRSLISVRALES 3
+ +GT+R++M+DG+VREL VR+VP ++++ISV ALE+
Sbjct: 309 SVCWIGTVRIRMHDGVVRELKEVRFVPQLKKNIISVGALEA 349
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 115 bits (287), Expect = 3e-24
Identities = 65/159 (40%), Positives = 93/159 (58%), Gaps = 7/159 (4%)
Frame = -2
Query: 458 KSKPKFKRG------RSVKDQCAYCKMFGHWKKDCHKLIEKNRKKSIRPLEVCITEENGV 297
+S+ K +RG R KD+CA+C+ GHWKKDC KL +KK P +V + E
Sbjct: 235 QSQSKGRRGWSKSISRVAKDECAFCREKGHWKKDCPKL----KKKGKAPQDVNVAECKSD 290
Query: 296 GDXXXXXXXXXXSICHSDVSDWIWDTEVTCHICPKREWFASFEKLDG-VVVVGDDHACRL 120
+ + S +WI D+ T H+ P REWF FE+LDG V +G+D+ C+
Sbjct: 291 AESDFSLAVSRLT---SHPDEWILDSTCTYHMTPMREWFFEFEELDGGFVYMGNDNPCKT 347
Query: 119 VGVGTIRVKMYDGMVRELHGVRYVPSARRSLISVRALES 3
VG+G+I+++ +DG R L VRYVP+ +RSLIS+ LES
Sbjct: 348 VGIGSIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLES 386
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 114 bits (285), Expect = 5e-24
Identities = 64/165 (38%), Positives = 94/165 (56%), Gaps = 2/165 (1%)
Frame = -2
Query: 491 LKGNRNSGRSLKSKPKFKRGRSV-KDQCAYCKMFGHWKKDCHKLIEKNRKKSIRPLEVCI 315
++G + S + +GR V KD+CA+C GHWKKDC KL +KK P + +
Sbjct: 143 IRGRQQSQTKERRGMSKSKGRVVAKDECAFCHEKGHWKKDCPKL----QKKEKVPQDANV 198
Query: 314 TEENGVGDXXXXXXXXXXSICHSDVSDWIWDTEVTCHICPKREWFASFEKLDG-VVVVGD 138
E D S +WI D+ T H+CP R+WF F++LDG VV +G+
Sbjct: 199 AECKS--DVESDISLIVSLSASSYPDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGN 256
Query: 137 DHACRLVGVGTIRVKMYDGMVRELHGVRYVPSARRSLISVRALES 3
D+ C+ VG+G+I+++ +DG R L VRYVP +++LIS+ ALES
Sbjct: 257 DNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALES 301
>gb|ONK81628.1| uncharacterized protein A4U43_C01F31260 [Asparagus officinalis]
Length = 267
Score = 109 bits (272), Expect = 5e-24
Identities = 56/130 (43%), Positives = 87/130 (66%), Gaps = 3/130 (2%)
Frame = -2
Query: 383 KKDCHKLIEK--NRKKSIRPLEVCITEENGVGDXXXXXXXXXXSICHSDVSDWIWDTEVT 210
++DC KL EK ++K + EV + ++ D + H D S+W+ D+ +
Sbjct: 64 ERDCPKLKEKENSKKNGSKANEVNVARDDD-SDDLCFSLLITPEVNHVDASNWMLDSGAS 122
Query: 209 CHICPKREWFASFEKLDG-VVVVGDDHACRLVGVGTIRVKMYDGMVRELHGVRYVPSARR 33
H+ P+R+WFASFE+LDG VVV+G+D +C + +GTIR++M+DG+VREL+ VR+VP +
Sbjct: 123 YHVTPRRDWFASFERLDGGVVVMGNDQSCGIYRIGTIRIQMHDGVVRELNEVRFVPQLKM 182
Query: 32 SLISVRALES 3
+LISVRALE+
Sbjct: 183 NLISVRALEA 192
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 113 bits (283), Expect = 9e-24
Identities = 68/187 (36%), Positives = 102/187 (54%), Gaps = 12/187 (6%)
Frame = -2
Query: 527 KIDVVKRDCTNNLKGNRNSGRSLKSKPKFKRGRS-------VKDQCAYCKMFGHWKKDCH 369
K D +K T + + GR +S+ K +RG S KD+CA+C GHWKKDC
Sbjct: 127 KQDKMKTKSTTSEEALVARGRQ-QSQTKERRGMSKSKGRAVAKDECAFCHEKGHWKKDCP 185
Query: 368 KLIEKNRKKSIRPLEVCITEENGVGDXXXXXXXXXXSICHSDVS----DWIWDTEVTCHI 201
KL +K + + ++ V + I S +WI D+ T H+
Sbjct: 186 KLQKKEK----------VLQDANVAECKSDVESDISLIVSLSASLYLDEWILDSGCTYHM 235
Query: 200 CPKREWFASFEKLDG-VVVVGDDHACRLVGVGTIRVKMYDGMVRELHGVRYVPSARRSLI 24
CP R+WF F++LDG VV +G+D+ C+ VG+G+I+++ +DG R L VRYVP +++LI
Sbjct: 236 CPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLI 295
Query: 23 SVRALES 3
S+ ALES
Sbjct: 296 SLGALES 302
>gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 365
Score = 108 bits (269), Expect = 8e-23
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 18/184 (9%)
Frame = -2
Query: 500 TNNLKGNRNSGRSLKSKPKFKRGRSVK----------------DQCAYCKMFGHWKKDCH 369
+N ++ +++G SL K RGRS ++C YCK GHWK+DC
Sbjct: 70 SNEVRNKQSTGESLTVKTSQDRGRSKNKFGNQYRYRSISKENDNRCYYCKKEGHWKRDCP 129
Query: 368 KLIEKNRKKSIRPLEVCITEENGVGDXXXXXXXXXXSICHSDVSD-WIWDTEVTCHICPK 192
K ++ ++K EE V + D SD WI D++ + H+CP
Sbjct: 130 KKSKQQQQKKSG-------EEASVASRLEKDSETLCTFSCMDSSDSWILDSDCSYHMCPF 182
Query: 191 REWFASFEKLDGV-VVVGDDHACRLVGVGTIRVKMYDGMVRELHGVRYVPSARRSLISVR 15
R+WF+++ DG V++G++ C+ VG+GTI++KM+DG++R L VR+VP R+ LIS+
Sbjct: 183 RDWFSTYSIHDGGRVIMGNNSECKSVGIGTIKIKMFDGVIRTLTEVRHVPDLRKGLISLG 242
Query: 14 ALES 3
L++
Sbjct: 243 TLDA 246
>gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 364
Score = 107 bits (266), Expect = 2e-22
Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 8/161 (4%)
Frame = -2
Query: 476 NSGRSLKSKP-KFKRGRSV--KDQCAYCKMFGHWKKDCHKLIEKNRKKSIRPLEVCITEE 306
NSG+++K K K KR +V KD C YCK GHWKKDC K K K S + T E
Sbjct: 215 NSGKNMKKKKDKSKRKTNVNPKDICNYCKEPGHWKKDCPK---KKGKPSAAVAKEESTSE 271
Query: 305 N----GVGDXXXXXXXXXXSICHSDVSDWIWDTEVTCHICPKREWFASFEKLDGV-VVVG 141
N + D HS+ WI D+ + H+CP R WF ++EK G V +G
Sbjct: 272 NELVLSIADQPQ----------HSE-DQWILDSGCSFHMCPNRTWFDTYEKKSGGNVFMG 320
Query: 140 DDHACRLVGVGTIRVKMYDGMVRELHGVRYVPSARRSLISV 18
+D C+ +G+GTI++KM+DG+ R L VR+VP +++LISV
Sbjct: 321 NDAPCKTIGIGTIKIKMHDGITRTLTEVRHVPELKKNLISV 361
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 108 bits (270), Expect = 5e-22
Identities = 60/167 (35%), Positives = 96/167 (57%), Gaps = 1/167 (0%)
Frame = -2
Query: 500 TNNLKGNRNSGRSLKSKPKFKRGRSVKDQCAYCKMFGHWKKDCHKLIEKNRKKSIRPLEV 321
T++ KG +N G+ K+KP K G D C YCK GHWK DC K +++ K+S+
Sbjct: 199 TSSRKGRKNGGK--KNKPMSK-GAKPDDVCNYCKEKGHWKFDCPKKKKQSEKQSV---SA 252
Query: 320 CITEENGVGDXXXXXXXXXXSICHSDVSDWIWDTEVTCHICPKREWFASFEKLDG-VVVV 144
+ EE+ HSDV W+ D+ + HICP+REWF ++E++DG + +
Sbjct: 253 AVAEED-TNSEEDIALVADEHTHHSDV--WVLDSGASYHICPRREWFTTYEQVDGGSISM 309
Query: 143 GDDHACRLVGVGTIRVKMYDGMVRELHGVRYVPSARRSLISVRALES 3
+ C++VG G+I+++ +DG L+ VR+VP ++LIS+ L+S
Sbjct: 310 ANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDS 356
>gb|PHU12529.1| hypothetical protein BC332_19459 [Capsicum chinense]
Length = 448
Score = 106 bits (265), Expect = 7e-22
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
Frame = -2
Query: 521 DVVKRDCTNNLKGNRNSGRSLKSKPKFKRGRSVKDQCAYCKMFGHWKKDCHKLIEKNRKK 342
D + RD T GN+ S ++S+ ++ R C YC GH K +C KL K + K
Sbjct: 6 DQIDRDITVEGSGNQASDLFVRSRSN-EKSRFSNSVCYYCHKKGHIKFNCPKLQNKGKVK 64
Query: 341 SIRPLEVCITEENGVGDXXXXXXXXXXSICHSDVSDWIWDTEVTCHICPKREWFASFEKL 162
+ E + D ++WI D+ + H+CP ++ F++++ +
Sbjct: 65 KNEHGDSDTAEASVAADEIEGAIFLVTENISCSNNEWILDSACSFHMCPNKDLFSTYDPV 124
Query: 161 DG-VVVVGDDHACRLVGVGTIRVKMYDGMVRELHGVRYVPSARRSLISVRALES 3
+G V++VG++ AC++VG GT+R+KM+DG+VR L VRYVP +++LIS+ LES
Sbjct: 125 EGGVILVGNNVACKIVGTGTVRIKMHDGIVRTLKNVRYVPELKKNLISLGTLES 178
>gb|KYP39598.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 350
Score = 105 bits (261), Expect = 8e-22
Identities = 63/155 (40%), Positives = 85/155 (54%), Gaps = 1/155 (0%)
Frame = -2
Query: 470 GRSLKSKPKFKRGRSVKDQCAYCKMFGHWKKDCHKLIEKNRKKSIRPLEVCITEENGVGD 291
G+ +SK K K G KD+CA+C+ GHWKKDC KL K + K++ V V D
Sbjct: 204 GKKKRSKSKAKVG---KDECAFCREKGHWKKDCPKLKNKGQSKTVADSNVA----EYVDD 256
Query: 290 XXXXXXXXXXSICHSDVSDWIWDTEVTCHICPKREWFASFEKLD-GVVVVGDDHACRLVG 114
+ S S W+ D+ + H+CP REWF F +L+ GVV +D G
Sbjct: 257 SDCSLAVSGST---SSSSAWLLDSGCSNHMCPNREWFYDFRELEEGVVYTANDVPLTTHG 313
Query: 113 VGTIRVKMYDGMVRELHGVRYVPSARRSLISVRAL 9
+G+IR+K DG +R L VR+VPS R+LISV AL
Sbjct: 314 IGSIRLKNRDGAIRTLKDVRFVPSLSRNLISVGAL 348
>gb|KYP67484.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 561
Score = 107 bits (266), Expect = 1e-21
Identities = 64/156 (41%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Frame = -2
Query: 470 GRSLKSKPKFKRGRSVKDQCAYCKMFGHWKKDCHKLIEKNRKKSIRPLEVCITEENGVGD 291
G+ +SK K K G KD+CA+C+ GHWKKDC KL K + K++ V V D
Sbjct: 192 GKKKRSKSKAKVG---KDECAFCREKGHWKKDCPKLKNKGQSKTVADSNVA----EYVDD 244
Query: 290 XXXXXXXXXXSICHSDVSDWIWDTEVTCHICPKREWFASFEKLD-GVVVVGDDHACRLVG 114
+ S S W+ D+ + H+CP REWF F +L+ GVV +D G
Sbjct: 245 SDCSLAVSGST---SSSSAWLLDSGCSNHMCPNREWFYDFRELEEGVVYTANDVPLTTHG 301
Query: 113 VGTIRVKMYDGMVRELHGVRYVPSARRSLISVRALE 6
+G+IR+K DG +R L VR+VPS R+LISV ALE
Sbjct: 302 IGSIRLKNRDGAIRTLKDVRFVPSLSRNLISVGALE 337
>gb|KYP47563.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 269
Score = 103 bits (256), Expect = 1e-21
Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 1/158 (0%)
Frame = -2
Query: 473 SGRSLKSKPKFKRGRSVKDQCAYCKMFGHWKKDCHKLIEKNRKKSIRPLEVCITEENGVG 294
+G+ K + K K + +D C YCK GHWKKDC K K +KS+ T+E+
Sbjct: 114 NGKKKKEQGKKKIKFNPRDICNYCKEPGHWKKDCPK---KRNQKSV----AAATQEDSSF 166
Query: 293 DXXXXXXXXXXSICHSDVSDWIWDTEVTCHICPKREWFASFEKLD-GVVVVGDDHACRLV 117
+ W+ D+ + H+CP R WF ++EK G V +G+D AC+++
Sbjct: 167 ENELVLSIVDNH--QHSAEQWVLDSGCSYHMCPNRSWFLTYEKKSSGDVFMGNDMACKII 224
Query: 116 GVGTIRVKMYDGMVRELHGVRYVPSARRSLISVRALES 3
G+ TI+++M+DG++R L VR+VP +++LISV L++
Sbjct: 225 GIETIQIEMHDGVIRTLTEVRHVPDLKKNLISVGVLDT 262
>gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 507
Score = 106 bits (265), Expect = 1e-21
Identities = 57/158 (36%), Positives = 90/158 (56%), Gaps = 1/158 (0%)
Frame = -2
Query: 473 SGRSLKSKPKFKRGRSVKDQCAYCKMFGHWKKDCHKLIEKNRKKSIRPLEVCITEENGVG 294
+G+ K + K K + +D C YCK GHWKKDC K K++ + + V E++
Sbjct: 116 NGKKKKEQGKKKTKVNPRDICNYCKEPGHWKKDCPK------KRNQKSVAVAAQEDSSFE 169
Query: 293 DXXXXXXXXXXSICHSDVSDWIWDTEVTCHICPKREWFASFEKLDGV-VVVGDDHACRLV 117
+ HS W+ D+ + H+CP R WF ++EK G V +G+D AC+ +
Sbjct: 170 NELVLSIVDNHQ--HS-AEQWVLDSGCSYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTI 226
Query: 116 GVGTIRVKMYDGMVRELHGVRYVPSARRSLISVRALES 3
G+GTI++KM+DG++R L VR+VP +++LISV L +
Sbjct: 227 GIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVGVLHT 264
>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 609
Score = 106 bits (265), Expect = 2e-21
Identities = 57/158 (36%), Positives = 90/158 (56%), Gaps = 1/158 (0%)
Frame = -2
Query: 473 SGRSLKSKPKFKRGRSVKDQCAYCKMFGHWKKDCHKLIEKNRKKSIRPLEVCITEENGVG 294
+G+ K + K K + +D C YCK GHWKKDC K K++ + + V E++
Sbjct: 143 NGKKKKEQGKKKTKVNPRDICNYCKEPGHWKKDCPK------KRNQKSVAVAAQEDSSFE 196
Query: 293 DXXXXXXXXXXSICHSDVSDWIWDTEVTCHICPKREWFASFEKLDGV-VVVGDDHACRLV 117
+ HS W+ D+ + H+CP R WF ++EK G V +G+D AC+ +
Sbjct: 197 NELVLSIVDNHQ--HS-AEQWVLDSGCSYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTI 253
Query: 116 GVGTIRVKMYDGMVRELHGVRYVPSARRSLISVRALES 3
G+GTI++KM+DG++R L VR+VP +++LISV L +
Sbjct: 254 GIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVGVLHT 291
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 107 bits (266), Expect = 2e-21
Identities = 64/156 (41%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Frame = -2
Query: 470 GRSLKSKPKFKRGRSVKDQCAYCKMFGHWKKDCHKLIEKNRKKSIRPLEVCITEENGVGD 291
G+ +SK K K G KD+CA+C+ GHWKKDC KL K + K++ V V D
Sbjct: 4 GKKKRSKSKAKVG---KDECAFCREKGHWKKDCPKLKNKGQSKTVADSNVA----EYVDD 56
Query: 290 XXXXXXXXXXSICHSDVSDWIWDTEVTCHICPKREWFASFEKLD-GVVVVGDDHACRLVG 114
+ S S W+ D+ + H+CP REWF F +L+ GVV +D G
Sbjct: 57 SDCSLAVSGST---SSSSAWLLDSGCSNHMCPNREWFYDFRELEEGVVYTANDVPLTTHG 113
Query: 113 VGTIRVKMYDGMVRELHGVRYVPSARRSLISVRALE 6
+G+IR+K DG +R L VR+VPS R+LISV ALE
Sbjct: 114 IGSIRLKNRDGAIRTLKDVRFVPSLSRNLISVGALE 149
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 107 bits (266), Expect = 2e-21
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 6/167 (3%)
Frame = -2
Query: 488 KGNRNSGRSLKSKPKFKRGRSVKDQCAYCKMFGHWKKDCHKLIEKNRKKSIRPLEVCITE 309
+ G S KS P+ + + + QC YCK +GH K DC K EK+ + + + +
Sbjct: 730 RSKAKGGSSSKSHPRSQSKKRI--QCYYCKKYGHMKVDCPKRKEKSESQEQQNDRANVAD 787
Query: 308 ENGVGDXXXXXXXXXXSICHSDVSD------WIWDTEVTCHICPKREWFASFEKLDGVVV 147
+ D VSD WI DT T HI ++ F+++EK G V+
Sbjct: 788 ADSSSDAEIVLA----------VSDSYAGGRWILDTGATFHISTSKDAFSTYEKHSGSVL 837
Query: 146 VGDDHACRLVGVGTIRVKMYDGMVRELHGVRYVPSARRSLISVRALE 6
+G+DHAC+++G+GT+R+KM+DG+VR L VR++P +++LIS+ L+
Sbjct: 838 MGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLD 884
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 107 bits (266), Expect = 2e-21
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 6/167 (3%)
Frame = -2
Query: 488 KGNRNSGRSLKSKPKFKRGRSVKDQCAYCKMFGHWKKDCHKLIEKNRKKSIRPLEVCITE 309
+ G S KS P+ + + + QC YCK +GH K DC K EK+ + + + +
Sbjct: 709 RSKAKGGSSSKSHPRSQSKKRI--QCYYCKKYGHMKVDCPKRKEKSESQEQQNDRANVAD 766
Query: 308 ENGVGDXXXXXXXXXXSICHSDVSD------WIWDTEVTCHICPKREWFASFEKLDGVVV 147
+ D VSD WI DT T HI ++ F+++EK G V+
Sbjct: 767 ADSSSDAEIVLA----------VSDSYAGGRWILDTGATFHISTSKDAFSTYEKHSGSVL 816
Query: 146 VGDDHACRLVGVGTIRVKMYDGMVRELHGVRYVPSARRSLISVRALE 6
+G+DHAC+++G+GT+R+KM+DG+VR L VR++P +++LIS+ L+
Sbjct: 817 MGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLD 863
>gb|PON45664.1| Zinc finger, CCHC-type, partial [Parasponia andersonii]
Length = 215
Score = 100 bits (248), Expect = 4e-21
Identities = 58/163 (35%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Frame = -2
Query: 488 KGNRNSGRSLKSKPKFKRGRSVKDQCAYCKMFGHWKKDCHKLIEKNRKKSIRPLEVCITE 309
+G S + K +GR KD+CA+C HWKKDC KL K + K+ V +
Sbjct: 58 RGCSQSHKQEKRGRSRSKGRVGKDECAFCYEKRHWKKDCPKLQNKGKDKATSDAYVAEVK 117
Query: 308 ENGVGDXXXXXXXXXXSICHSDVSDWIWDTEVTCHICPKREWFASFEKLDG-VVVVGDDH 132
+ D +D +WI + T H+ P +EWF +FE++DG VV +G+D
Sbjct: 118 D----DESDFALVSQSMTSQND--EWILASGCTYHMYPHKEWFFNFEEVDGRVVYMGNDE 171
Query: 131 ACRLVGVGTIRVKMYDGMVRELHGVRYVPSARRSLISVRALES 3
+C+ GVG+IR+K +DG R L +RYV ++ IS+ AL+S
Sbjct: 172 SCKTTGVGSIRLKNHDGSTRVLTDIRYVLKLKKIFISLGALKS 214
>gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 593
Score = 105 bits (261), Expect = 5e-21
Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 1/158 (0%)
Frame = -2
Query: 473 SGRSLKSKPKFKRGRSVKDQCAYCKMFGHWKKDCHKLIEKNRKKSIRPLEVCITEENGVG 294
+G+ K + K K + +D C YCK GHWKKDC K K++ + + V E++
Sbjct: 195 NGKKKKEQGKKKTKVNPRDICNYCKEPGHWKKDCPK------KRNQKSVVVAAQEDSSFE 248
Query: 293 DXXXXXXXXXXSICHSDVSDWIWDTEVTCHICPKREWFASFEK-LDGVVVVGDDHACRLV 117
+ V W+ D+ + H+CP R WF ++EK G V +G+D AC+ +
Sbjct: 249 NELVLSIVDNH---QHFVEQWVLDSGCSYHMCPNRSWFLTYEKKFGGDVFMGNDMACKTI 305
Query: 116 GVGTIRVKMYDGMVRELHGVRYVPSARRSLISVRALES 3
+GTI++KM+DG++R L VR+VP +++LISV L++
Sbjct: 306 SIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVGVLDT 343
>gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 448
Score = 103 bits (258), Expect = 6e-21
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Frame = -2
Query: 413 CAYCKMFGHWKKDCHKLIEKNRKKSIRPLEVCITEENGVGDXXXXXXXXXXSICHSDVSD 234
C YCK GHWK DC K KK+ +P V + E D H +D
Sbjct: 1 CNYCKEPGHWKNDCPK------KKNQKPTAVTVQESTSSSDNELVLSIVDN---HQQSAD 51
Query: 233 -WIWDTEVTCHICPKREWFASFE-KLDGVVVVGDDHACRLVGVGTIRVKMYDGMVRELHG 60
W+ D+ + H+CP R WF ++E +L G V +G+D C+ VG+GTI+++M+DG++R L
Sbjct: 52 QWVLDSGCSYHMCPNRSWFLTYEERLGGRVFMGNDMPCKTVGIGTIQLRMHDGVIRTLTE 111
Query: 59 VRYVPSARRSLISVRALES 3
VR+VP +++LISV L+S
Sbjct: 112 VRHVPDLKKNLISVGVLDS 130