BLASTX nr result
ID: Ophiopogon23_contig00019698
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00019698
(1222 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020262150.1| DNA-directed RNA polymerase IV subunit 1 [As... 445 e-140
ref|XP_017700629.1| PREDICTED: DNA-directed RNA polymerase IV su... 350 e-105
ref|XP_017700627.1| PREDICTED: DNA-directed RNA polymerase IV su... 350 e-105
gb|ONK73338.1| uncharacterized protein A4U43_C04F29910 [Asparagu... 340 e-102
ref|XP_019705595.1| PREDICTED: DNA-directed RNA polymerase IV su... 338 e-101
ref|XP_020572391.1| DNA-directed RNA polymerase IV subunit 1 iso... 322 2e-96
ref|XP_020572390.1| DNA-directed RNA polymerase IV subunit 1 iso... 322 4e-96
ref|XP_020572386.1| DNA-directed RNA polymerase IV subunit 1 iso... 322 2e-95
ref|XP_009411449.1| PREDICTED: DNA-directed RNA polymerase IV su... 318 5e-94
ref|XP_020084500.1| DNA-directed RNA polymerase IV subunit 1 iso... 315 1e-92
gb|PKU59217.1| DNA-directed RNA polymerase D subunit 1 [Dendrobi... 313 1e-92
ref|XP_020681066.1| DNA-directed RNA polymerase IV subunit 1 iso... 313 4e-92
ref|XP_020681065.1| DNA-directed RNA polymerase IV subunit 1 iso... 313 5e-92
ref|XP_009411452.1| PREDICTED: DNA-directed RNA polymerase IV su... 303 1e-88
gb|OAY84267.1| DNA-directed RNA polymerase IV subunit 1 [Ananas ... 259 2e-73
gb|ACL30983.1| mutant DNA dependent RNA polymerase D largest sub... 230 1e-68
gb|PNT71744.1| hypothetical protein BRADI_2g34876v3 [Brachypodiu... 244 2e-68
gb|PNT71745.1| hypothetical protein BRADI_2g34876v3 [Brachypodiu... 244 6e-68
ref|XP_003566523.1| PREDICTED: DNA-directed RNA polymerase IV su... 244 7e-68
ref|XP_015696685.1| PREDICTED: DNA-directed RNA polymerase IV su... 243 2e-67
>ref|XP_020262150.1| DNA-directed RNA polymerase IV subunit 1 [Asparagus officinalis]
Length = 1529
Score = 445 bits (1145), Expect = e-140
Identities = 227/361 (62%), Positives = 270/361 (74%), Gaps = 16/361 (4%)
Frame = +2
Query: 188 MADDSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTC 367
M D +++MVPSAQLLG+KFDL+TG DIEKFS VN+ND+SDL S KLG+PNA S+CTTC
Sbjct: 1 MEKDLNSERMVPSAQLLGIKFDLMTGPDIEKFSQVNVNDSSDLNSVKLGLPNASSECTTC 60
Query: 368 GSTHIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXXTISS 547
GST+ DCEGHFGVIKLP IYHPYL+ E+VHILNQICP CKS I +
Sbjct: 61 GSTNTKDCEGHFGVIKLPATIYHPYLVNEVVHILNQICPGCKSIKKQTRKDMQIKKKIET 120
Query: 548 IRRLLLKMKFEKITMPQSQNLLSRVANAHVKHLKFSGSEKKWGTVDNQAECKHCSRNSEE 727
++RLLLKMKFEK+ MPQ+QNLLS+VA VKHLKFSGS KKW +V+NQA CK+CS+NS+
Sbjct: 121 LQRLLLKMKFEKLKMPQNQNLLSKVAK--VKHLKFSGSNKKWASVENQASCKYCSKNSQN 178
Query: 728 --WYPAIKFKTL------------SRDTNGKKCVAITAEFN--VPKKFENMSLSEVLPKD 859
WYPAIKF+TL D+ GKKCVAI AE N VP++F N SLSEVLPKD
Sbjct: 179 KYWYPAIKFETLLTDSKGKIVSKGKTDSKGKKCVAIVAEINERVPRQFRNKSLSEVLPKD 238
Query: 860 FWNFVPMLPSQHENSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSCIPVS 1039
FW+F+PM+ QH S SMD N+I LSP Q FYLL+E+ KEFIE+FV RRELIFLS +PV+
Sbjct: 239 FWDFMPMVSYQHNKSESMDVNKIILSPAQVFYLLKEISKEFIEKFVSRRELIFLSYVPVA 298
Query: 1040 PNCQRVVETIHTYSDGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIASRVH 1219
PNCQ VVET + DK TK YR VVDAS+ I+E+H+HQQFGF AA+ IASRVH
Sbjct: 299 PNCQHVVET----XXXXXXNVDKCTKVYRSVVDASRNINEYHQHQQFGFRAAAYIASRVH 354
Query: 1220 E 1222
+
Sbjct: 355 D 355
>ref|XP_017700629.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Phoenix dactylifera]
Length = 1566
Score = 350 bits (899), Expect = e-105
Identities = 181/363 (49%), Positives = 239/363 (65%), Gaps = 20/363 (5%)
Frame = +2
Query: 188 MADDSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTC 367
MA D I + M PS L G++FD+LT DDIEK HVNI +++D+ ++KLG+PNA S+C TC
Sbjct: 1 MASDQIIELMAPSGLLTGIEFDILTDDDIEKICHVNIVESNDVTNAKLGLPNASSRCQTC 60
Query: 368 GSTHIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXX---- 535
GS + DCEGH G+IKLP IYHPY + E++ ILNQICP C S
Sbjct: 61 GSKNTRDCEGHVGLIKLPRTIYHPYFVTEVIQILNQICPGCMSIKGDLQMKDSFDLETWE 120
Query: 536 --------------TISSIRRLLLKMKFEKITMPQSQNLLSRVANAHVKHLKFSGSEKKW 673
TI+++RR LK+ K+ Q++L ++K G KKW
Sbjct: 121 KSIGEDHISEAFGKTIAALRRKFLKLCKSKVLF-SPQSVLDHARKFYLKKSLEVG--KKW 177
Query: 674 GTVDNQAECKHCSRNSEEWYPAIKFKTLSRDTNGKKCVAITAEFN--VPKKFENMSLSEV 847
D QA CK+C+RN+ +WYPA+KFK LS+D GKK +++ AE N +PKKF+N SL +V
Sbjct: 178 AKTDAQATCKYCARNATDWYPAVKFKLLSKDMLGKKSLSVIAEVNDKLPKKFQNKSLGDV 237
Query: 848 LPKDFWNFVPMLPSQHENSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSC 1027
LP+DFW+FVP Q E++ NRIT+SP QAF LL+ELD EFI+QF RR+++FLS
Sbjct: 238 LPQDFWSFVPTFSQQQESNA----NRITVSPYQAFCLLKELDPEFIKQFALRRDVLFLSY 293
Query: 1028 IPVSPNCQRVVETIHTYSDGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIA 1207
+PVSPNC RVVET H ++DGP+LS D+STKAY+ +VD S+KIDEF +HQQF +A S I
Sbjct: 294 LPVSPNCHRVVETSHVHADGPQLSFDQSTKAYKRLVDISRKIDEFRQHQQFVPLATSFIT 353
Query: 1208 SRV 1216
SRV
Sbjct: 354 SRV 356
>ref|XP_017700627.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Phoenix dactylifera]
ref|XP_017700628.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Phoenix dactylifera]
Length = 1567
Score = 350 bits (899), Expect = e-105
Identities = 181/363 (49%), Positives = 239/363 (65%), Gaps = 20/363 (5%)
Frame = +2
Query: 188 MADDSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTC 367
MA D I + M PS L G++FD+LT DDIEK HVNI +++D+ ++KLG+PNA S+C TC
Sbjct: 1 MASDQIIELMAPSGLLTGIEFDILTDDDIEKICHVNIVESNDVTNAKLGLPNASSRCQTC 60
Query: 368 GSTHIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXX---- 535
GS + DCEGH G+IKLP IYHPY + E++ ILNQICP C S
Sbjct: 61 GSKNTRDCEGHVGLIKLPRTIYHPYFVTEVIQILNQICPGCMSIKGDLQMKDSFDLETWE 120
Query: 536 --------------TISSIRRLLLKMKFEKITMPQSQNLLSRVANAHVKHLKFSGSEKKW 673
TI+++RR LK+ K+ Q++L ++K G KKW
Sbjct: 121 KSIGEDHISEAFGKTIAALRRKFLKLCKSKVLF-SPQSVLDHARKFYLKKSLEVG--KKW 177
Query: 674 GTVDNQAECKHCSRNSEEWYPAIKFKTLSRDTNGKKCVAITAEFN--VPKKFENMSLSEV 847
D QA CK+C+RN+ +WYPA+KFK LS+D GKK +++ AE N +PKKF+N SL +V
Sbjct: 178 AKTDAQATCKYCARNATDWYPAVKFKLLSKDMLGKKSLSVIAEVNDKLPKKFQNKSLGDV 237
Query: 848 LPKDFWNFVPMLPSQHENSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSC 1027
LP+DFW+FVP Q E++ NRIT+SP QAF LL+ELD EFI+QF RR+++FLS
Sbjct: 238 LPQDFWSFVPTFSQQQESNA----NRITVSPYQAFCLLKELDPEFIKQFALRRDVLFLSY 293
Query: 1028 IPVSPNCQRVVETIHTYSDGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIA 1207
+PVSPNC RVVET H ++DGP+LS D+STKAY+ +VD S+KIDEF +HQQF +A S I
Sbjct: 294 LPVSPNCHRVVETSHVHADGPQLSFDQSTKAYKRLVDISRKIDEFRQHQQFVPLATSFIT 353
Query: 1208 SRV 1216
SRV
Sbjct: 354 SRV 356
>gb|ONK73338.1| uncharacterized protein A4U43_C04F29910 [Asparagus officinalis]
Length = 1445
Score = 340 bits (872), Expect = e-102
Identities = 173/278 (62%), Positives = 205/278 (73%), Gaps = 16/278 (5%)
Frame = +2
Query: 161 KGQSSWKPIMADDSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVP 340
+ QSS IM D +++MVPSAQLLG+KFDL+TG DIEKFS VN+ND+SDL S KLG+P
Sbjct: 2 QSQSSQHTIMEKDLNSERMVPSAQLLGIKFDLMTGPDIEKFSQVNVNDSSDLNSVKLGLP 61
Query: 341 NACSQCTTCGSTHIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXX 520
NA S+CTTCGST+ DCEGHFGVIKLP IYHPYL+ E+VHILNQICP CKS
Sbjct: 62 NASSECTTCGSTNTKDCEGHFGVIKLPATIYHPYLVNEVVHILNQICPGCKSIKKQTRKD 121
Query: 521 XXXXXTISSIRRLLLKMKFEKITMPQSQNLLSRVANAHVKHLKFSGSEKKWGTVDNQAEC 700
I +++RLLLKMKFEK+ MPQ+QNLLS+VA VKHLKFSGS KKW +V+NQA C
Sbjct: 122 MQIKKKIETLQRLLLKMKFEKLKMPQNQNLLSKVAK--VKHLKFSGSNKKWASVENQASC 179
Query: 701 KHCSRNSEE--WYPAIKFKTL------------SRDTNGKKCVAITAEFN--VPKKFENM 832
K+CS+NS+ WYPAIKF+TL D+ GKKCVAI AE N VP++F N
Sbjct: 180 KYCSKNSQNKYWYPAIKFETLLTDSKGKIVSKGKTDSKGKKCVAIVAEINERVPRQFRNK 239
Query: 833 SLSEVLPKDFWNFVPMLPSQHENSVSMDPNRITLSPVQ 946
SLSEVLPKDFW+F+PM+ QH S SMD N+I LSP Q
Sbjct: 240 SLSEVLPKDFWDFMPMVSYQHNKSESMDVNKIILSPAQ 277
>ref|XP_019705595.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Elaeis
guineensis]
Length = 1569
Score = 338 bits (866), Expect = e-101
Identities = 173/363 (47%), Positives = 237/363 (65%), Gaps = 20/363 (5%)
Frame = +2
Query: 188 MADDSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTC 367
MA D I + M PS L G+ FD+LT DDIEK HV+I +++D+ ++KLG+PNA S+C TC
Sbjct: 1 MASDQIIELMAPSGLLTGITFDILTDDDIEKICHVSIVESNDVTNAKLGLPNASSRCQTC 60
Query: 368 GSTHIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXX---- 535
GS + DCEGH G IKLP IYHPY + E++ ILNQICP C S
Sbjct: 61 GSRNTRDCEGHVGFIKLPRTIYHPYFVTEVIQILNQICPGCMSIKGDLQIKDSFDLETWE 120
Query: 536 --------------TISSIRRLLLKMKFEKITMPQSQNLLSRVANAHVKHLKFSGSEKKW 673
TI++++R +LK+ K++ Q+++ V ++K+ KKW
Sbjct: 121 KFIGEDHVSEAFGKTIAAVKRKVLKLCKSKVSF-SPQSVIQHVKKVYLKNCL--EVRKKW 177
Query: 674 GTVDNQAECKHCSRNSEEWYPAIKFKTLSRDTNGKKCVAITAEFN--VPKKFENMSLSEV 847
D QA CK+C+RN+ WYPA+KFK S+D GKK ++I AE N +PKKF+N SL +V
Sbjct: 178 AKTDAQATCKYCARNATNWYPAVKFKLFSKDMLGKKSLSIIAEVNEKLPKKFQNKSLCDV 237
Query: 848 LPKDFWNFVPMLPSQHENSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSC 1027
LP+DFW+FVP Q E++ NRIT+SP QAF LL+ELD EFI+QF RR+++FLS
Sbjct: 238 LPQDFWSFVPSFSQQQESNA----NRITVSPYQAFCLLKELDPEFIKQFALRRDVLFLSY 293
Query: 1028 IPVSPNCQRVVETIHTYSDGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIA 1207
+PV+PNC RVVET + ++DGP+LS D+ TKAY+ +VD S+KI+EF +HQQF +A S I
Sbjct: 294 LPVAPNCHRVVETSYVHADGPQLSFDERTKAYKRLVDISRKIEEFRQHQQFVPLATSFIT 353
Query: 1208 SRV 1216
+RV
Sbjct: 354 NRV 356
>ref|XP_020572391.1| DNA-directed RNA polymerase IV subunit 1 isoform X4 [Phalaenopsis
equestris]
Length = 1225
Score = 322 bits (826), Expect = 2e-96
Identities = 161/350 (46%), Positives = 228/350 (65%), Gaps = 3/350 (0%)
Frame = +2
Query: 182 PIMADDSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCT 361
PIMAD + +PSA+L G+KF+L+TG+++E+FS V+I D +DLV +KLG+P+ SQC+
Sbjct: 2 PIMADCPTVFETIPSARLNGIKFELMTGEEMERFSSVSILDVNDLVDAKLGLPSTSSQCS 61
Query: 362 TCGSTHIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXXTI 541
TCGS + DC+GHFGVIKLP ++YHPY + EIVHILNQICP CKS T+
Sbjct: 62 TCGSKSVKDCDGHFGVIKLPISVYHPYFLPEIVHILNQICPGCKSVRHESQIKRRLFHTV 121
Query: 542 SSIRRLLLKMKFEKITMPQSQNLLSRVANAHVKHLKF-SGSEKKWGTVDNQAECKHCSRN 718
+++ ++T + +LS + +LK K+ GT+ N++ CK+C+ +
Sbjct: 122 RKKLLRYIRLSLSRLT----RKVLSGDLKDDISYLKIRKHISKEVGTIGNKSGCKYCASS 177
Query: 719 SEEWYPAIKFKTLSRDTNGKKCVAITAEFN--VPKKFENMSLSEVLPKDFWNFVPMLPSQ 892
S EWYP +KFK ++D G+K ++I AE N +PKKF+N S E+LPKDFWNFVP +
Sbjct: 178 SFEWYPTLKFKISNKDFQGRKGLSILAEVNAKLPKKFQNRSFGELLPKDFWNFVP----K 233
Query: 893 HENSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSCIPVSPNCQRVVETIH 1072
+ ++ N I LSP Q F LL++LD++FI QFV RREL+FLSC+PV+PN R+VE H
Sbjct: 234 YHKQQCLNSNSIFLSPWQVFSLLKQLDRDFINQFVSRRELLFLSCLPVTPNSHRIVEVTH 293
Query: 1073 TYSDGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIASRVHE 1222
+DG R+S D TK Y+ + D KK+D +H QF + +S I RV E
Sbjct: 294 ALTDGSRISFDDRTKIYKRMADLGKKLDGVLQHPQFRALTSSFITDRVRE 343
>ref|XP_020572390.1| DNA-directed RNA polymerase IV subunit 1 isoform X3 [Phalaenopsis
equestris]
Length = 1277
Score = 322 bits (826), Expect = 4e-96
Identities = 161/350 (46%), Positives = 228/350 (65%), Gaps = 3/350 (0%)
Frame = +2
Query: 182 PIMADDSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCT 361
PIMAD + +PSA+L G+KF+L+TG+++E+FS V+I D +DLV +KLG+P+ SQC+
Sbjct: 2 PIMADCPTVFETIPSARLNGIKFELMTGEEMERFSSVSILDVNDLVDAKLGLPSTSSQCS 61
Query: 362 TCGSTHIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXXTI 541
TCGS + DC+GHFGVIKLP ++YHPY + EIVHILNQICP CKS T+
Sbjct: 62 TCGSKSVKDCDGHFGVIKLPISVYHPYFLPEIVHILNQICPGCKSVRHESQIKRRLFHTV 121
Query: 542 SSIRRLLLKMKFEKITMPQSQNLLSRVANAHVKHLKF-SGSEKKWGTVDNQAECKHCSRN 718
+++ ++T + +LS + +LK K+ GT+ N++ CK+C+ +
Sbjct: 122 RKKLLRYIRLSLSRLT----RKVLSGDLKDDISYLKIRKHISKEVGTIGNKSGCKYCASS 177
Query: 719 SEEWYPAIKFKTLSRDTNGKKCVAITAEFN--VPKKFENMSLSEVLPKDFWNFVPMLPSQ 892
S EWYP +KFK ++D G+K ++I AE N +PKKF+N S E+LPKDFWNFVP +
Sbjct: 178 SFEWYPTLKFKISNKDFQGRKGLSILAEVNAKLPKKFQNRSFGELLPKDFWNFVP----K 233
Query: 893 HENSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSCIPVSPNCQRVVETIH 1072
+ ++ N I LSP Q F LL++LD++FI QFV RREL+FLSC+PV+PN R+VE H
Sbjct: 234 YHKQQCLNSNSIFLSPWQVFSLLKQLDRDFINQFVSRRELLFLSCLPVTPNSHRIVEVTH 293
Query: 1073 TYSDGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIASRVHE 1222
+DG R+S D TK Y+ + D KK+D +H QF + +S I RV E
Sbjct: 294 ALTDGSRISFDDRTKIYKRMADLGKKLDGVLQHPQFRALTSSFITDRVRE 343
>ref|XP_020572386.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Phalaenopsis
equestris]
ref|XP_020572387.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Phalaenopsis
equestris]
ref|XP_020572388.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Phalaenopsis
equestris]
Length = 1503
Score = 322 bits (826), Expect = 2e-95
Identities = 161/350 (46%), Positives = 228/350 (65%), Gaps = 3/350 (0%)
Frame = +2
Query: 182 PIMADDSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCT 361
PIMAD + +PSA+L G+KF+L+TG+++E+FS V+I D +DLV +KLG+P+ SQC+
Sbjct: 2 PIMADCPTVFETIPSARLNGIKFELMTGEEMERFSSVSILDVNDLVDAKLGLPSTSSQCS 61
Query: 362 TCGSTHIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXXTI 541
TCGS + DC+GHFGVIKLP ++YHPY + EIVHILNQICP CKS T+
Sbjct: 62 TCGSKSVKDCDGHFGVIKLPISVYHPYFLPEIVHILNQICPGCKSVRHESQIKRRLFHTV 121
Query: 542 SSIRRLLLKMKFEKITMPQSQNLLSRVANAHVKHLKF-SGSEKKWGTVDNQAECKHCSRN 718
+++ ++T + +LS + +LK K+ GT+ N++ CK+C+ +
Sbjct: 122 RKKLLRYIRLSLSRLT----RKVLSGDLKDDISYLKIRKHISKEVGTIGNKSGCKYCASS 177
Query: 719 SEEWYPAIKFKTLSRDTNGKKCVAITAEFN--VPKKFENMSLSEVLPKDFWNFVPMLPSQ 892
S EWYP +KFK ++D G+K ++I AE N +PKKF+N S E+LPKDFWNFVP +
Sbjct: 178 SFEWYPTLKFKISNKDFQGRKGLSILAEVNAKLPKKFQNRSFGELLPKDFWNFVP----K 233
Query: 893 HENSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSCIPVSPNCQRVVETIH 1072
+ ++ N I LSP Q F LL++LD++FI QFV RREL+FLSC+PV+PN R+VE H
Sbjct: 234 YHKQQCLNSNSIFLSPWQVFSLLKQLDRDFINQFVSRRELLFLSCLPVTPNSHRIVEVTH 293
Query: 1073 TYSDGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIASRVHE 1222
+DG R+S D TK Y+ + D KK+D +H QF + +S I RV E
Sbjct: 294 ALTDGSRISFDDRTKIYKRMADLGKKLDGVLQHPQFRALTSSFITDRVRE 343
>ref|XP_009411449.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
ref|XP_009411450.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 1569
Score = 318 bits (816), Expect = 5e-94
Identities = 163/361 (45%), Positives = 223/361 (61%), Gaps = 21/361 (5%)
Frame = +2
Query: 197 DSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTCGST 376
D I ++ +PS +L G+ FDL+T DIEK +VNI +A+++ S+KLG+PNA SQC TCGS
Sbjct: 4 DLIMEQAIPSGRLSGIIFDLMTDADIEKICNVNIVEANEVTSAKLGLPNASSQCATCGSR 63
Query: 377 HIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXXTISS--- 547
+I DC+GH G +KLP IYHP+ + E+VHILNQICP CK+ S
Sbjct: 64 NIRDCDGHSGFVKLPKTIYHPFFVTEVVHILNQICPGCKTVKKDLKMKGSVILEASEKAI 123
Query: 548 ----------------IRRLLLKMKFEKITMPQSQNLLSRVANAHVKHLKFSGSEKKWGT 679
++R LLK+ K+ +P L + K + K W +
Sbjct: 124 GEGIYILEAFGKNLTVLQRRLLKLCRSKLLLPTRSILARNTKVRFINLKKILKTRKNWVS 183
Query: 680 VDNQAECKHCSRNSEEWYPAIKFKTLSRDTNGKKCVAITAEFN--VPKKFENMSLSEVLP 853
D+Q CK+C+R + WYP +KFK S+D G++ ++I AE N +PKKF + SL EVLP
Sbjct: 184 KDSQVCCKYCARKANGWYPPVKFKISSKDILGRRSLSIIAEVNEKLPKKFHSQSLGEVLP 243
Query: 854 KDFWNFVPMLPSQHENSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSCIP 1033
+D+WNF+P + P++I L+P Q F LL ELD EFI+QFV RREL+FLS +P
Sbjct: 244 EDYWNFIPKVSLLQ----GAKPSKIDLTPHQVFCLLSELDPEFIQQFVSRRELLFLSYLP 299
Query: 1034 VSPNCQRVVETIHTYSDGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIASR 1213
++PNCQRVVET H ++DGP+LS D+ T+AY+ + D SKKI EF HQQFG +A S SR
Sbjct: 300 ITPNCQRVVETSHVFADGPKLSFDERTRAYKRLADVSKKIGEFRHHQQFGPLATSYTMSR 359
Query: 1214 V 1216
V
Sbjct: 360 V 360
>ref|XP_020084500.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Ananas comosus]
ref|XP_020084501.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Ananas comosus]
Length = 1545
Score = 315 bits (806), Expect = 1e-92
Identities = 165/366 (45%), Positives = 234/366 (63%), Gaps = 23/366 (6%)
Frame = +2
Query: 188 MADDSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTC 367
MAD+ I ++ VPS L GLKFDL+TGDDIEK S+ +I +A+DL ++KLG+PNA SQC TC
Sbjct: 1 MADEQIGEQAVPSGILTGLKFDLMTGDDIEKLSNASIVEANDLTNAKLGLPNALSQCATC 60
Query: 368 GSTHIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPAC------------------- 490
GS ++ C+GHFG IKLP IYHPY + EIV ILNQICP C
Sbjct: 61 GSKNLRGCDGHFGAIKLPAIIYHPYFVGEIVQILNQICPGCLSVKQDQEAKGSSMLEATE 120
Query: 491 KSXXXXXXXXXXXXXTISSIRRLLLKMKFEKITMPQSQNLLSRVANAHVKHLKFSGS-EK 667
K + +++ LLK+ K+ + +L+R + + +LK K
Sbjct: 121 KFVESDLLILKALEKNLGGLQKKLLKICKSKLLL---SGILARGSKVRICYLKKRVKFRK 177
Query: 668 KWGTVDNQAECKHCSRNSEEWYPAIKFKTLSRDTNGKKCVAITAEFN--VPKKFENMSLS 841
+W D Q+ CK C+ YP+++FK S+D GK+ ++I AE N +PKKF+N S+
Sbjct: 178 RWARTDKQSSCKFCASTPNNRYPSVRFKISSKDMVGKRNLSIVAEVNEKLPKKFQNKSMD 237
Query: 842 EVLPKDFWNFVPMLPSQHENSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFL 1021
EVLP+D+W+F+PM Q + + +RITLSP QAF+LL++LD EF++QFVPRREL+FL
Sbjct: 238 EVLPQDYWDFIPMDQQQRQ----LKTSRITLSPHQAFHLLKQLDPEFLKQFVPRRELLFL 293
Query: 1022 SCIPVSPNCQRVVETIHTYSDGPRLS-HDKSTKAYRGVVDASKKIDEFHKHQQFGFVAAS 1198
S +PV+ N R +ET H ++DGP+LS D+ TKAY+ VV+ S++IDEF +H QF A+S
Sbjct: 294 SSLPVTANSHRAMETSHPHADGPQLSFRDERTKAYKKVVEVSRRIDEFRQHPQFRAFASS 353
Query: 1199 LIASRV 1216
+++RV
Sbjct: 354 YVSNRV 359
>gb|PKU59217.1| DNA-directed RNA polymerase D subunit 1 [Dendrobium catenatum]
Length = 1286
Score = 313 bits (801), Expect = 1e-92
Identities = 161/351 (45%), Positives = 228/351 (64%), Gaps = 6/351 (1%)
Frame = +2
Query: 188 MADDSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTC 367
MA ++ PSA+L G+KF+L+TG+++E FS V+I + +DLV +KLG+P+ SQC+ C
Sbjct: 1 MASGPTICQITPSARLSGIKFELMTGEEMELFSSVSILEVNDLVDAKLGLPSTSSQCSAC 60
Query: 368 GSTHIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXXTISS 547
GST++ DC+GHFGVIKLP ++YHPY + EIVHILNQICP CKS I S
Sbjct: 61 GSTNVKDCDGHFGVIKLPISVYHPYFLPEIVHILNQICPGCKS---FRHESRIKRRLIHS 117
Query: 548 IRRLLL---KMKFEKITMPQSQNLLSRVANAHVKHLKF-SGSEKKWGTVDNQAECKHCSR 715
+R+ LL +++ ++T + +LS + +LK K+ G + + CK+C+
Sbjct: 118 VRKKLLRYIRLRLSRLT----RKVLSGDLKDDISYLKIRKHIYKEVGAIGKNSGCKYCAS 173
Query: 716 NSEEWYPAIKFKTLSRDTNGKKCVAITAEFN--VPKKFENMSLSEVLPKDFWNFVPMLPS 889
+S EWYP +KFK +RD G+K ++I AE N +PKKF+N S E+LPKD+WNFVP
Sbjct: 174 SSFEWYPTLKFKISNRDVQGRKGLSILAEVNEKLPKKFQNRSFGELLPKDYWNFVP---- 229
Query: 890 QHENSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSCIPVSPNCQRVVETI 1069
+ ++ N I LSP Q F LL++LD +FI QFV RREL+FLSC+PV+PN R+VET
Sbjct: 230 NYHKQQGLNSNSIFLSPWQVFCLLKQLDLDFINQFVSRRELLFLSCLPVTPNSHRIVETT 289
Query: 1070 HTYSDGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIASRVHE 1222
H +SDG R+S D+ TK Y+ +VD KK+D +H Q + +S I RV E
Sbjct: 290 HAFSDGSRISFDERTKIYKRMVDLGKKLDGVLQHPQLRALTSSFITDRVRE 340
>ref|XP_020681066.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Dendrobium
catenatum]
Length = 1438
Score = 313 bits (801), Expect = 4e-92
Identities = 161/351 (45%), Positives = 228/351 (64%), Gaps = 6/351 (1%)
Frame = +2
Query: 188 MADDSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTC 367
MA ++ PSA+L G+KF+L+TG+++E FS V+I + +DLV +KLG+P+ SQC+ C
Sbjct: 1 MASGPTICQITPSARLSGIKFELMTGEEMELFSSVSILEVNDLVDAKLGLPSTSSQCSAC 60
Query: 368 GSTHIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXXTISS 547
GST++ DC+GHFGVIKLP ++YHPY + EIVHILNQICP CKS I S
Sbjct: 61 GSTNVKDCDGHFGVIKLPISVYHPYFLPEIVHILNQICPGCKS---FRHESRIKRRLIHS 117
Query: 548 IRRLLL---KMKFEKITMPQSQNLLSRVANAHVKHLKF-SGSEKKWGTVDNQAECKHCSR 715
+R+ LL +++ ++T + +LS + +LK K+ G + + CK+C+
Sbjct: 118 VRKKLLRYIRLRLSRLT----RKVLSGDLKDDISYLKIRKHIYKEVGAIGKNSGCKYCAS 173
Query: 716 NSEEWYPAIKFKTLSRDTNGKKCVAITAEFN--VPKKFENMSLSEVLPKDFWNFVPMLPS 889
+S EWYP +KFK +RD G+K ++I AE N +PKKF+N S E+LPKD+WNFVP
Sbjct: 174 SSFEWYPTLKFKISNRDVQGRKGLSILAEVNEKLPKKFQNRSFGELLPKDYWNFVP---- 229
Query: 890 QHENSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSCIPVSPNCQRVVETI 1069
+ ++ N I LSP Q F LL++LD +FI QFV RREL+FLSC+PV+PN R+VET
Sbjct: 230 NYHKQQGLNSNSIFLSPWQVFCLLKQLDLDFINQFVSRRELLFLSCLPVTPNSHRIVETT 289
Query: 1070 HTYSDGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIASRVHE 1222
H +SDG R+S D+ TK Y+ +VD KK+D +H Q + +S I RV E
Sbjct: 290 HAFSDGSRISFDERTKIYKRMVDLGKKLDGVLQHPQLRALTSSFITDRVRE 340
>ref|XP_020681065.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Dendrobium
catenatum]
Length = 1499
Score = 313 bits (801), Expect = 5e-92
Identities = 161/351 (45%), Positives = 228/351 (64%), Gaps = 6/351 (1%)
Frame = +2
Query: 188 MADDSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTC 367
MA ++ PSA+L G+KF+L+TG+++E FS V+I + +DLV +KLG+P+ SQC+ C
Sbjct: 1 MASGPTICQITPSARLSGIKFELMTGEEMELFSSVSILEVNDLVDAKLGLPSTSSQCSAC 60
Query: 368 GSTHIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXXTISS 547
GST++ DC+GHFGVIKLP ++YHPY + EIVHILNQICP CKS I S
Sbjct: 61 GSTNVKDCDGHFGVIKLPISVYHPYFLPEIVHILNQICPGCKS---FRHESRIKRRLIHS 117
Query: 548 IRRLLL---KMKFEKITMPQSQNLLSRVANAHVKHLKF-SGSEKKWGTVDNQAECKHCSR 715
+R+ LL +++ ++T + +LS + +LK K+ G + + CK+C+
Sbjct: 118 VRKKLLRYIRLRLSRLT----RKVLSGDLKDDISYLKIRKHIYKEVGAIGKNSGCKYCAS 173
Query: 716 NSEEWYPAIKFKTLSRDTNGKKCVAITAEFN--VPKKFENMSLSEVLPKDFWNFVPMLPS 889
+S EWYP +KFK +RD G+K ++I AE N +PKKF+N S E+LPKD+WNFVP
Sbjct: 174 SSFEWYPTLKFKISNRDVQGRKGLSILAEVNEKLPKKFQNRSFGELLPKDYWNFVP---- 229
Query: 890 QHENSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSCIPVSPNCQRVVETI 1069
+ ++ N I LSP Q F LL++LD +FI QFV RREL+FLSC+PV+PN R+VET
Sbjct: 230 NYHKQQGLNSNSIFLSPWQVFCLLKQLDLDFINQFVSRRELLFLSCLPVTPNSHRIVETT 289
Query: 1070 HTYSDGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIASRVHE 1222
H +SDG R+S D+ TK Y+ +VD KK+D +H Q + +S I RV E
Sbjct: 290 HAFSDGSRISFDERTKIYKRMVDLGKKLDGVLQHPQLRALTSSFITDRVRE 340
>ref|XP_009411452.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 1562
Score = 303 bits (776), Expect = 1e-88
Identities = 160/361 (44%), Positives = 218/361 (60%), Gaps = 21/361 (5%)
Frame = +2
Query: 197 DSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTCGST 376
D I ++ +PS +L G+ FDL+T DIEK +VNI +A+++ S+KLG+PNA SQC TCGS
Sbjct: 4 DLIMEQAIPSGRLSGIIFDLMTDADIEKICNVNIVEANEVTSAKLGLPNASSQCATCGSR 63
Query: 377 HIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXXTISS--- 547
+I DC+GH G +KLP IYHP+ + E+VHILNQICP CK+ S
Sbjct: 64 NIRDCDGHSGFVKLPKTIYHPFFVTEVVHILNQICPGCKTVKKDLKMKGSVILEASEKAI 123
Query: 548 ----------------IRRLLLKMKFEKITMPQSQNLLSRVANAHVKHLKFSGSEKKWGT 679
++R LLK+ K+ +P L + K + K W +
Sbjct: 124 GEGIYILEAFGKNLTVLQRRLLKLCRSKLLLPTRSILARNTKVRFINLKKILKTRKNWVS 183
Query: 680 VDNQAECKHCSRNSEEWYPAIKFKTLSRDTNGKKCVAITAEFN--VPKKFENMSLSEVLP 853
D+Q R + WYP +KFK S+D G++ ++I AE N +PKKF + SL EVLP
Sbjct: 184 KDSQ-------RKANGWYPPVKFKISSKDILGRRSLSIIAEVNEKLPKKFHSQSLGEVLP 236
Query: 854 KDFWNFVPMLPSQHENSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSCIP 1033
+D+WNF+P + P++I L+P Q F LL ELD EFI+QFV RREL+FLS +P
Sbjct: 237 EDYWNFIPKVSLLQ----GAKPSKIDLTPHQVFCLLSELDPEFIQQFVSRRELLFLSYLP 292
Query: 1034 VSPNCQRVVETIHTYSDGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIASR 1213
++PNCQRVVET H ++DGP+LS D+ T+AY+ + D SKKI EF HQQFG +A S SR
Sbjct: 293 ITPNCQRVVETSHVFADGPKLSFDERTRAYKRLADVSKKIGEFRHHQQFGPLATSYTMSR 352
Query: 1214 V 1216
V
Sbjct: 353 V 353
>gb|OAY84267.1| DNA-directed RNA polymerase IV subunit 1 [Ananas comosus]
Length = 1556
Score = 259 bits (663), Expect = 2e-73
Identities = 140/322 (43%), Positives = 208/322 (64%), Gaps = 7/322 (2%)
Frame = +2
Query: 275 EKFSHVNINDASDLVSSKLGVPNACSQCTTCGSTHIGDCEGHFGVIKLPTAIYHPYLIYE 454
EK S+ +I +A+DL ++KLG+PNA SQC TCGS ++ C+GHFG IKLP IYHPY + E
Sbjct: 65 EKLSNASIVEANDLTNAKLGLPNALSQCATCGSKNLRGCDGHFGAIKLPAIIYHPYFVGE 124
Query: 455 IVHILNQICPACKS--XXXXXXXXXXXXXTISSIRRLLLKMKFEKITMPQSQNLLSRVAN 628
IV ILNQICP C S T + LL +K + + Q L ++
Sbjct: 125 IVQILNQICPGCLSVKQDQEAKGSSMLEATEKFVESDLLILKALEKNLGGLQKKLLKICK 184
Query: 629 AH--VKHLKFSGSEKKWGTVDNQAECKHCSRNSEEWYPAIKFKTLSRDTNGKKCVAITAE 802
+ + + GS+ + + + + + + N+ YP+++FK S+D GK+ ++I AE
Sbjct: 185 SKLLLSGILARGSKVRICYLKKRVKFRKSTPNNR--YPSVRFKISSKDMVGKRNLSIVAE 242
Query: 803 FN--VPKKFENMSLSEVLPKDFWNFVPMLPSQHENSVSMDPNRITLSPVQAFYLLRELDK 976
N +PKKF+N S+ EVLP+D+W+F+PM Q + + +RITLSP QAF+LL++LD
Sbjct: 243 VNEKLPKKFQNKSMDEVLPQDYWDFIPMDQQQRQ----LKTSRITLSPHQAFHLLKQLDP 298
Query: 977 EFIEQFVPRRELIFLSCIPVSPNCQRVVETIHTYSDGPRLS-HDKSTKAYRGVVDASKKI 1153
EF++QFVPRREL+FLS +PV+ N R +ET H ++DGP+LS D+ TKAY+ VV+ S++I
Sbjct: 299 EFLKQFVPRRELLFLSSLPVTANSHRAMETSHPHADGPQLSFRDERTKAYKKVVEVSRRI 358
Query: 1154 DEFHKHQQFGFVAASLIASRVH 1219
DEF +H QF A+S +++R+H
Sbjct: 359 DEFRQHPQFRAFASSYVSNRLH 380
>gb|ACL30983.1| mutant DNA dependent RNA polymerase D largest subunit rpd1-14 [Zea
mays]
Length = 352
Score = 230 bits (586), Expect = 1e-68
Identities = 133/348 (38%), Positives = 192/348 (55%), Gaps = 14/348 (4%)
Frame = +2
Query: 221 PSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTCGSTHIGDCEGH 400
P A L +KFDL+T D+EK S ++I + SD+ S KLG+PN QC TCGS DC+GH
Sbjct: 8 PEAILNAIKFDLMTSTDMEKLSSMSIIEVSDVTSPKLGLPNGSLQCETCGSQRGRDCDGH 67
Query: 401 FGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXXTISSIRRLLLKMKFE 580
FGV KL +++PY I ++VH LN+ICP C S +++ E
Sbjct: 68 FGVTKLAATVHNPYFIDDVVHFLNRICPGCLSPREGIDTK---------------RLERE 112
Query: 581 KITMPQSQNLLSRVANAHVKHLKFSGSEKKWGTVDNQAECKHCSRNSEEWYPAIKFKTLS 760
K+ QA CK+CS++ + YP+I FKTLS
Sbjct: 113 KV----------------------------------QATCKYCSKDGSKLYPSIVFKTLS 138
Query: 761 ------------RDTNGKKCVAITAEF--NVPKKFENMSLSEVLPKDFWNFVPMLPSQHE 898
R+ + + ++I AE +P + + E LP DFW+FVP Q +
Sbjct: 139 SPRVLLFKSKLHRNASVMERISIVAEAADRMPNRSKGKGSLEGLPLDFWDFVPSENKQVQ 198
Query: 899 NSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSCIPVSPNCQRVVETIHTY 1078
++++ +I LSP Q FY+L++ D E I+QFV RREL+FLSC+PV+PNC RVVE +
Sbjct: 199 SNMT----KIILSPYQVFYMLKKSDPELIKQFVSRRELLFLSCLPVTPNCHRVVEIGYGL 254
Query: 1079 SDGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIASRVHE 1222
DG RL+ D TKAY+ +VD S++ID++ +H F +A+SL++SRV E
Sbjct: 255 PDG-RLTFDDRTKAYKRMVDVSRRIDDYRQHPHFSVLASSLVSSRVSE 301
>gb|PNT71744.1| hypothetical protein BRADI_2g34876v3 [Brachypodium distachyon]
Length = 1051
Score = 244 bits (622), Expect = 2e-68
Identities = 139/347 (40%), Positives = 189/347 (54%), Gaps = 12/347 (3%)
Frame = +2
Query: 218 VPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTCGSTHIGDCEG 397
VP A+L LKFDLL+ DIE S NI +ASD+ S+KLG+PNA QC TCGS ++ DC+G
Sbjct: 14 VPMAELKALKFDLLSSADIETLSSANIIEASDVTSAKLGLPNAAPQCVTCGSQNVRDCDG 73
Query: 398 HFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXXTISSIRRLLLKMKF 577
H GVIKLP +Y PY + ++V LNQICP C +
Sbjct: 74 HSGVIKLPATVYSPYFLEQLVQFLNQICPGCWTP-------------------------- 107
Query: 578 EKITMPQSQNLLSRVANAHVKHLKFSGSEKKWGTVDNQAECKHCSRNSEEWYPAIKFKTL 757
K + K+ Q CK+CS++ YP++ FK L
Sbjct: 108 -----------------------KQNRDTKRSDAATIQEPCKYCSKDG--LYPSVIFKVL 142
Query: 758 S------------RDTNGKKCVAITAEFNVPKKFENMSLSEVLPKDFWNFVPMLPSQHEN 901
+ R+T+ V++TAE V +N S EVLP D+WNFVP H
Sbjct: 143 TSPRITLSKSKLQRNTSVMDKVSVTAE--VINMSKNKSSLEVLPHDYWNFVP-----HNQ 195
Query: 902 SVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSCIPVSPNCQRVVETIHTYS 1081
+ +I LSP Q F++L+++D E I +F PRREL+FLSC+PV+PN RV E + +S
Sbjct: 196 PPQPNTTKILLSPYQVFHILKQVDLELITKFAPRRELLFLSCLPVTPNRHRVAEMPYRFS 255
Query: 1082 DGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIASRVHE 1222
DGP L++D TKAY+ VDASKKID++ +H QF +A+S + SRV E
Sbjct: 256 DGPSLAYDDRTKAYKRTVDASKKIDDYRQHPQFSVLASSFVTSRVME 302
>gb|PNT71745.1| hypothetical protein BRADI_2g34876v3 [Brachypodium distachyon]
Length = 1388
Score = 244 bits (622), Expect = 6e-68
Identities = 139/347 (40%), Positives = 189/347 (54%), Gaps = 12/347 (3%)
Frame = +2
Query: 218 VPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTCGSTHIGDCEG 397
VP A+L LKFDLL+ DIE S NI +ASD+ S+KLG+PNA QC TCGS ++ DC+G
Sbjct: 14 VPMAELKALKFDLLSSADIETLSSANIIEASDVTSAKLGLPNAAPQCVTCGSQNVRDCDG 73
Query: 398 HFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXXTISSIRRLLLKMKF 577
H GVIKLP +Y PY + ++V LNQICP C +
Sbjct: 74 HSGVIKLPATVYSPYFLEQLVQFLNQICPGCWTP-------------------------- 107
Query: 578 EKITMPQSQNLLSRVANAHVKHLKFSGSEKKWGTVDNQAECKHCSRNSEEWYPAIKFKTL 757
K + K+ Q CK+CS++ YP++ FK L
Sbjct: 108 -----------------------KQNRDTKRSDAATIQEPCKYCSKDG--LYPSVIFKVL 142
Query: 758 S------------RDTNGKKCVAITAEFNVPKKFENMSLSEVLPKDFWNFVPMLPSQHEN 901
+ R+T+ V++TAE V +N S EVLP D+WNFVP H
Sbjct: 143 TSPRITLSKSKLQRNTSVMDKVSVTAE--VINMSKNKSSLEVLPHDYWNFVP-----HNQ 195
Query: 902 SVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSCIPVSPNCQRVVETIHTYS 1081
+ +I LSP Q F++L+++D E I +F PRREL+FLSC+PV+PN RV E + +S
Sbjct: 196 PPQPNTTKILLSPYQVFHILKQVDLELITKFAPRRELLFLSCLPVTPNRHRVAEMPYRFS 255
Query: 1082 DGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIASRVHE 1222
DGP L++D TKAY+ VDASKKID++ +H QF +A+S + SRV E
Sbjct: 256 DGPSLAYDDRTKAYKRTVDASKKIDDYRQHPQFSVLASSFVTSRVME 302
>ref|XP_003566523.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Brachypodium distachyon]
gb|KQK07373.1| hypothetical protein BRADI_2g34876v3 [Brachypodium distachyon]
gb|PNT71743.1| hypothetical protein BRADI_2g34876v3 [Brachypodium distachyon]
Length = 1470
Score = 244 bits (622), Expect = 7e-68
Identities = 139/347 (40%), Positives = 189/347 (54%), Gaps = 12/347 (3%)
Frame = +2
Query: 218 VPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTCGSTHIGDCEG 397
VP A+L LKFDLL+ DIE S NI +ASD+ S+KLG+PNA QC TCGS ++ DC+G
Sbjct: 14 VPMAELKALKFDLLSSADIETLSSANIIEASDVTSAKLGLPNAAPQCVTCGSQNVRDCDG 73
Query: 398 HFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXXTISSIRRLLLKMKF 577
H GVIKLP +Y PY + ++V LNQICP C +
Sbjct: 74 HSGVIKLPATVYSPYFLEQLVQFLNQICPGCWTP-------------------------- 107
Query: 578 EKITMPQSQNLLSRVANAHVKHLKFSGSEKKWGTVDNQAECKHCSRNSEEWYPAIKFKTL 757
K + K+ Q CK+CS++ YP++ FK L
Sbjct: 108 -----------------------KQNRDTKRSDAATIQEPCKYCSKDG--LYPSVIFKVL 142
Query: 758 S------------RDTNGKKCVAITAEFNVPKKFENMSLSEVLPKDFWNFVPMLPSQHEN 901
+ R+T+ V++TAE V +N S EVLP D+WNFVP H
Sbjct: 143 TSPRITLSKSKLQRNTSVMDKVSVTAE--VINMSKNKSSLEVLPHDYWNFVP-----HNQ 195
Query: 902 SVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSCIPVSPNCQRVVETIHTYS 1081
+ +I LSP Q F++L+++D E I +F PRREL+FLSC+PV+PN RV E + +S
Sbjct: 196 PPQPNTTKILLSPYQVFHILKQVDLELITKFAPRRELLFLSCLPVTPNRHRVAEMPYRFS 255
Query: 1082 DGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIASRVHE 1222
DGP L++D TKAY+ VDASKKID++ +H QF +A+S + SRV E
Sbjct: 256 DGPSLAYDDRTKAYKRTVDASKKIDDYRQHPQFSVLASSFVTSRVME 302
>ref|XP_015696685.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Oryza
brachyantha]
Length = 1476
Score = 243 bits (619), Expect = 2e-67
Identities = 142/359 (39%), Positives = 205/359 (57%), Gaps = 14/359 (3%)
Frame = +2
Query: 188 MADDSITDKMVPSAQLLGLKFDLLTGDDIEKFSHVNINDASDLVSSKLGVPNACSQCTTC 367
M + S+ KM P A+L +KF L+T D+EKFS V+I + D+ ++KLG+PN QC TC
Sbjct: 8 MEELSLEVKM-PEAKLNAIKFSLMTSSDMEKFSSVSIIEMRDVTNAKLGLPNGAPQCATC 66
Query: 368 GSTHIGDCEGHFGVIKLPTAIYHPYLIYEIVHILNQICPACKSXXXXXXXXXXXXXTISS 547
G +I DC+GHFGVIKL +++PY I E+V +LNQICP C
Sbjct: 67 GFRNIRDCDGHFGVIKLAATVHNPYFIEEVVQLLNQICPGC------------------- 107
Query: 548 IRRLLLKMKFEKITMPQSQNLLSRVANAHVKHLKFSGSEKKWGTVDNQAECKHCSRNSEE 727
+T+ Q N K K G+ T+ QA CK+CS++ +
Sbjct: 108 ------------LTLKQ---------NGETKLKKGDGT-----TI--QATCKYCSKDGAK 139
Query: 728 WYPAIKFKTLS------------RDTNGKKCVAITAEF--NVPKKFENMSLSEVLPKDFW 865
YP+I FK L+ R+T+ ++I AE V K +N E+LP+DFW
Sbjct: 140 LYPSIIFKMLTSPRVTLSRSKLHRNTSVMDKMSIIAEVASRVTHKSKNKVPHEILPQDFW 199
Query: 866 NFVPMLPSQHENSVSMDPNRITLSPVQAFYLLRELDKEFIEQFVPRRELIFLSCIPVSPN 1045
+F+P +++V+ + LSP Q F++L+++D E I Q PRREL+FLSC+PV+PN
Sbjct: 200 DFLPDDNQPPQSNVT----KKILSPYQVFHMLKKIDPELINQVTPRRELLFLSCLPVTPN 255
Query: 1046 CQRVVETIHTYSDGPRLSHDKSTKAYRGVVDASKKIDEFHKHQQFGFVAASLIASRVHE 1222
C RVVE + +SDGPRL+ D TKAY+ +VD S++ID++ +H QFG A+S + SRV E
Sbjct: 256 CHRVVEMPYGHSDGPRLAFDDRTKAYKRMVDVSRRIDDYRQHPQFGVYASSAVTSRVME 314