BLASTX nr result

ID: Ophiopogon23_contig00019663 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00019663
         (553 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020257602.1| remorin 4.1-like isoform X2 [Asparagus offic...   137   1e-36
ref|XP_020276791.1| caldesmon-like isoform X1 [Asparagus officin...   121   5e-31
ref|XP_020257601.1| remorin 4.1-like isoform X1 [Asparagus offic...   113   5e-27

>ref|XP_020257602.1| remorin 4.1-like isoform X2 [Asparagus officinalis]
          Length = 249

 Score =  137 bits (344), Expect = 1e-36
 Identities = 72/126 (57%), Positives = 82/126 (65%)
 Frame = -2

Query: 378 MIQLGNYSDGEFEXXXXXXXXXITSLEERESLRKQRGSVKFSGVSLPKTKSRNEDTNAKP 199
           M Q   +SDGEFE         IT LEE++  +KQRGSVKFS  +LPK KSRNED   K 
Sbjct: 2   MRQTDIFSDGEFEALIAAAAYAITLLEEKDGPQKQRGSVKFSEETLPKAKSRNEDAKVKL 61

Query: 198 TSFSGSFKRWFSDQEPKEDGKPEGSKRTESGKEMRPGPIRVPETKKFPTSSFGNRNHAGY 19
            SF GSFK+WFSDQ  KED KP GSKR++SGKE RP   R P  K  PTSSFG R    Y
Sbjct: 62  NSFRGSFKKWFSDQGAKEDEKPGGSKRSDSGKETRPSLPRAPSAKILPTSSFGRRTQGEY 121

Query: 18  SPEQRK 1
           SP++ K
Sbjct: 122 SPDKNK 127


>ref|XP_020276791.1| caldesmon-like isoform X1 [Asparagus officinalis]
 gb|ONK64810.1| uncharacterized protein A4U43_C07F30190 [Asparagus officinalis]
          Length = 228

 Score =  121 bits (304), Expect = 5e-31
 Identities = 70/128 (54%), Positives = 78/128 (60%)
 Frame = -2

Query: 402 QRTDSRRKMIQLGNYSDGEFEXXXXXXXXXITSLEERESLRKQRGSVKFSGVSLPKTKSR 223
           +RTDSR         SDGEFE         ITSL+ERE   KQRGSVKFSG         
Sbjct: 2   RRTDSR---------SDGEFEAAIAAAAYAITSLDEREGSTKQRGSVKFSGDHFG----- 47

Query: 222 NEDTNAKPTSFSGSFKRWFSDQEPKEDGKPEGSKRTESGKEMRPGPIRVPETKKFPTSSF 43
           NED   K +SFSGSFKRWF+DQ  +EDGKP GSKR  S KEM PG  +    ++FPTSSF
Sbjct: 48  NEDDRKKLSSFSGSFKRWFTDQAAREDGKPGGSKRAGSRKEMTPGSPKASSVERFPTSSF 107

Query: 42  GNRNHAGY 19
           GNR   GY
Sbjct: 108 GNRTQDGY 115


>ref|XP_020257601.1| remorin 4.1-like isoform X1 [Asparagus officinalis]
 gb|ONK75773.1| uncharacterized protein A4U43_C03F20400 [Asparagus officinalis]
          Length = 301

 Score =  113 bits (282), Expect = 5e-27
 Identities = 72/178 (40%), Positives = 82/178 (46%), Gaps = 52/178 (29%)
 Frame = -2

Query: 378 MIQLGNYSDGEFEXXXXXXXXXITSLEERESLRKQRGSVKFSGVSLPKTKSRNEDTNAKP 199
           M Q   +SDGEFE         IT LEE++  +KQRGSVKFS  +LPK KSRNED   K 
Sbjct: 2   MRQTDIFSDGEFEALIAAAAYAITLLEEKDGPQKQRGSVKFSEETLPKAKSRNEDAKVKL 61

Query: 198 TSFSGSFKRWFSDQEPKEDGKP-------------------------------------- 133
            SF GSFK+WFSDQ  KED KP                                      
Sbjct: 62  NSFRGSFKKWFSDQGAKEDEKPGVSGDSFTRKPEIEEQINREDPSANNSITETARDSTPD 121

Query: 132 --------------EGSKRTESGKEMRPGPIRVPETKKFPTSSFGNRNHAGYSPEQRK 1
                          GSKR++SGKE RP   R P  K  PTSSFG R    YSP++ K
Sbjct: 122 TKKTPSFTDNHLNGTGSKRSDSGKETRPSLPRAPSAKILPTSSFGRRTQGEYSPDKNK 179


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