BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00019426
         (464 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACD63081.1| RNA polymerase II largest subunit, partial [Aspar...   286   3e-88
ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [As...   286   9e-87
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial...   281   7e-85
ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 iso...   280   1e-84
ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 iso...   280   1e-84
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su...   280   2e-84
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su...   280   2e-84
gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apos...   280   2e-84
gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dend...   278   1e-83
ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [De...   278   1e-83
gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japo...   270   2e-83
ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su...   276   3e-83
dbj|GAU22666.1| hypothetical protein TSUD_234880 [Trifolium subt...   261   3e-83
ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [An...   276   4e-83
gb|ACD63087.1| RNA polymerase II largest subunit, partial [Nicot...   272   6e-83
gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papav...   272   8e-83
gb|PON82669.1| DNA-directed RNA polymerase, subunit beta-prime [...   259   1e-82
gb|PON49951.1| DNA-directed RNA polymerase, subunit gamma [Paras...   259   1e-82
ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Se...   269   1e-82
gb|ACD63086.1| RNA polymerase II largest subunit, partial [Lirio...   271   2e-82

>gb|ACD63081.1| RNA polymerase II largest subunit, partial [Asparagus officinalis]
          Length = 1009

 Score =  286 bits (733), Expect = 3e-88
 Identities = 144/154 (93%), Positives = 144/154 (93%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           PVKKSRGGCGAQQPNITIDGMKMVAEYKA KKKSDDPEQLPEPVERKQQLSAERVLSVLK
Sbjct: 83  PVKKSRGGCGAQQPNITIDGMKMVAEYKATKKKSDDPEQLPEPVERKQQLSAERVLSVLK 142

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDCLLLGLNPKYARPDWMILQVL         SVMMDTSARSEDDLTHQLAMIIRH
Sbjct: 143 RISDEDCLLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRH 202

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN
Sbjct: 203 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 236


>ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [Asparagus officinalis]
 gb|ONK55404.1| uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
          Length = 1843

 Score =  286 bits (733), Expect = 9e-87
 Identities = 144/154 (93%), Positives = 144/154 (93%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           PVKKSRGGCGAQQPNITIDGMKMVAEYKA KKKSDDPEQLPEPVERKQQLSAERVLSVLK
Sbjct: 164 PVKKSRGGCGAQQPNITIDGMKMVAEYKATKKKSDDPEQLPEPVERKQQLSAERVLSVLK 223

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDCLLLGLNPKYARPDWMILQVL         SVMMDTSARSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCLLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRH 283

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 317


>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
          Length = 1705

 Score =  281 bits (719), Expect = 7e-85
 Identities = 140/154 (90%), Positives = 143/154 (92%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           P+KKSRGGCGAQQPNITIDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLK
Sbjct: 164 PMKKSRGGCGAQQPNITIDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLK 223

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDCLLLGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCLLLGLNPKYARPDWMILQVLPIPLPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 283

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 317


>ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 isoform X1 [Phalaenopsis
           equestris]
          Length = 1827

 Score =  280 bits (717), Expect = 1e-84
 Identities = 141/154 (91%), Positives = 142/154 (92%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLK
Sbjct: 164 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLK 223

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDC LLGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 283

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 317


>ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 isoform X2 [Phalaenopsis
           equestris]
          Length = 1827

 Score =  280 bits (717), Expect = 1e-84
 Identities = 141/154 (91%), Positives = 142/154 (92%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLK
Sbjct: 164 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLK 223

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDC LLGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 283

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 317


>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
           guineensis]
          Length = 1842

 Score =  280 bits (716), Expect = 2e-84
 Identities = 139/154 (90%), Positives = 143/154 (92%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           P+KKSRGGCGAQQPNITIDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLK
Sbjct: 164 PIKKSRGGCGAQQPNITIDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLK 223

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDCLLLGL+PKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCLLLGLSPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 283

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 317


>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
           dactylifera]
          Length = 1842

 Score =  280 bits (716), Expect = 2e-84
 Identities = 139/154 (90%), Positives = 143/154 (92%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           P+KKSRGGCGAQQPNITIDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLK
Sbjct: 164 PIKKSRGGCGAQQPNITIDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLK 223

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDCLLLGL+PKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCLLLGLDPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 283

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 317


>gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apostasia shenzhenica]
          Length = 1806

 Score =  280 bits (715), Expect = 2e-84
 Identities = 139/154 (90%), Positives = 142/154 (92%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           P+KKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLK
Sbjct: 164 PIKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLK 223

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDC LLGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAM+IRH
Sbjct: 224 RISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRH 283

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 317


>gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dendrobium catenatum]
          Length = 1516

 Score =  278 bits (710), Expect = 1e-83
 Identities = 138/154 (89%), Positives = 142/154 (92%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           P+KKSRGGCGAQQPNIT+DGMKMVAEYKAPKKKS+D EQLPEPVERKQ LSAERVLSVLK
Sbjct: 226 PIKKSRGGCGAQQPNITVDGMKMVAEYKAPKKKSEDQEQLPEPVERKQILSAERVLSVLK 285

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDC LLGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 286 RISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 345

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN
Sbjct: 346 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 379


>ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [Dendrobium catenatum]
          Length = 1841

 Score =  278 bits (710), Expect = 1e-83
 Identities = 138/154 (89%), Positives = 142/154 (92%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           P+KKSRGGCGAQQPNIT+DGMKMVAEYKAPKKKS+D EQLPEPVERKQ LSAERVLSVLK
Sbjct: 164 PIKKSRGGCGAQQPNITVDGMKMVAEYKAPKKKSEDQEQLPEPVERKQILSAERVLSVLK 223

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDC LLGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 283

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 317


>gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japonica Group]
          Length = 804

 Score =  270 bits (691), Expect = 2e-83
 Identities = 136/154 (88%), Positives = 142/154 (92%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           PVKK RGGCGAQQPNIT+DGMKMVAE+KAPKKK+DD EQLPEPVERKQ LSAERVL+VLK
Sbjct: 95  PVKK-RGGCGAQQPNITVDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLK 153

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDCLLLGLNPK+ARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 154 RISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 213

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN
Sbjct: 214 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 247


>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
           subsp. malaccensis]
          Length = 1832

 Score =  276 bits (707), Expect = 3e-83
 Identities = 138/154 (89%), Positives = 142/154 (92%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           P+KKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSD+ EQLPEP ERKQ LSAERVLSVLK
Sbjct: 164 PMKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDEQEQLPEPAERKQILSAERVLSVLK 223

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDCLLLGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCLLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 283

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHII+EFAQLLQFHIATYFDN
Sbjct: 284 NENLRRQERNGAPAHIISEFAQLLQFHIATYFDN 317


>dbj|GAU22666.1| hypothetical protein TSUD_234880 [Trifolium subterraneum]
          Length = 452

 Score =  261 bits (666), Expect = 3e-83
 Identities = 131/156 (83%), Positives = 139/156 (89%), Gaps = 2/156 (1%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           PVKKSRGGCGAQQP ITI+GMKM+AEYKA +KKSDD EQLPEPVERKQ LSAERVL VLK
Sbjct: 163 PVKKSRGGCGAQQPKITIEGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLK 222

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSE--DDLTHQLAMII 354
           RISDEDC LLGLNPKYARPDW+ILQVL         SVMMDTS+RSE  DDLTHQLAMII
Sbjct: 223 RISDEDCQLLGLNPKYARPDWLILQVLPIPPPPVRPSVMMDTSSRSEASDDLTHQLAMII 282

Query: 355 RHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           RHNENL+RQERNG+PAHII+EFAQLLQFHIATYFDN
Sbjct: 283 RHNENLKRQERNGSPAHIISEFAQLLQFHIATYFDN 318


>ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [Ananas comosus]
 gb|OAY68410.1| DNA-directed RNA polymerase II subunit rpb1 [Ananas comosus]
          Length = 1854

 Score =  276 bits (706), Expect = 4e-83
 Identities = 138/154 (89%), Positives = 142/154 (92%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           PVKKSRGGCGAQQPNIT+DGMKMVAE+KA KKKSDD EQLPEPVERKQ LSAERVL+VLK
Sbjct: 164 PVKKSRGGCGAQQPNITVDGMKMVAEFKASKKKSDDQEQLPEPVERKQILSAERVLNVLK 223

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDCLLLGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCLLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 283

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 317


>gb|ACD63087.1| RNA polymerase II largest subunit, partial [Nicotiana tabacum]
          Length = 1010

 Score =  272 bits (696), Expect = 6e-83
 Identities = 133/154 (86%), Positives = 141/154 (91%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           PVKKSRGGCGAQQP I+IDGMKMVAEYK  KKKSDDPEQ+PEPVERKQQLSAERVLS+LK
Sbjct: 82  PVKKSRGGCGAQQPKISIDGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILK 141

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           R+SDEDCLLLGLNP+YARPDWMILQ L         SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 142 RVSDEDCLLLGLNPEYARPDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 201

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENL+RQERNGAPAHII+EFAQLLQFHIATYFDN
Sbjct: 202 NENLKRQERNGAPAHIISEFAQLLQFHIATYFDN 235


>gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papaver orientale]
          Length = 1010

 Score =  272 bits (695), Expect = 8e-83
 Identities = 133/154 (86%), Positives = 141/154 (91%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           PVKKSRGGCGAQQP +TI+GMKM+AEYK  +KK+DDPEQLPEPVERKQQL+AERVLSVLK
Sbjct: 82  PVKKSRGGCGAQQPKLTIEGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLK 141

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDC+LLGLNPKYARPDWMILQVL         SVMMDTSARSEDDLTHQLAMIIRH
Sbjct: 142 RISDEDCILLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRH 201

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLR+QERNGAPAHII EFAQLLQFHIATYFDN
Sbjct: 202 NENLRKQERNGAPAHIILEFAQLLQFHIATYFDN 235


>gb|PON82669.1| DNA-directed RNA polymerase, subunit beta-prime [Trema orientalis]
          Length = 460

 Score =  259 bits (663), Expect = 1e-82
 Identities = 130/157 (82%), Positives = 140/157 (89%), Gaps = 3/157 (1%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           PVKKSRGGCGAQQP +TIDGMK++AEYK+ +KKSD+ EQLPEPVERKQ L+AERVLSVLK
Sbjct: 163 PVKKSRGGCGAQQPKLTIDGMKIIAEYKSQRKKSDEQEQLPEPVERKQTLTAERVLSVLK 222

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSE---DDLTHQLAMI 351
           RISDEDC LLGLNPKYARPDWMILQVL         SVMMDTS+RSE   DDLTHQLAMI
Sbjct: 223 RISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEASFDDLTHQLAMI 282

Query: 352 IRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           IRHNENLRRQERNG+PAHII+EFAQLLQFHIATYFDN
Sbjct: 283 IRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDN 319


>gb|PON49951.1| DNA-directed RNA polymerase, subunit gamma [Parasponia andersonii]
          Length = 460

 Score =  259 bits (663), Expect = 1e-82
 Identities = 130/157 (82%), Positives = 140/157 (89%), Gaps = 3/157 (1%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           PVKKSRGGCGAQQP +TIDGMK++AEYK+ +KKSD+ EQLPEPVERKQ L+AERVLSVLK
Sbjct: 163 PVKKSRGGCGAQQPKLTIDGMKIIAEYKSQRKKSDEQEQLPEPVERKQTLTAERVLSVLK 222

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSE---DDLTHQLAMI 351
           RISDEDC LLGLNPKYARPDWMILQVL         SVMMDTS+RSE   DDLTHQLAMI
Sbjct: 223 RISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEASFDDLTHQLAMI 282

Query: 352 IRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           IRHNENLRRQERNG+PAHII+EFAQLLQFHIATYFDN
Sbjct: 283 IRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDN 319


>ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Setaria italica]
 gb|KQL00755.1| hypothetical protein SETIT_013247mg [Setaria italica]
          Length = 860

 Score =  269 bits (688), Expect = 1e-82
 Identities = 135/154 (87%), Positives = 142/154 (92%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           PVKK RGGCGAQQPNIT+DGMKMVAE+KAPKKK+DD +QLPEPVERKQ LSAERVL+VLK
Sbjct: 164 PVKK-RGGCGAQQPNITVDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLK 222

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDCLLLGLNPK+ARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 223 RISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 282

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN
Sbjct: 283 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 316


>gb|ACD63086.1| RNA polymerase II largest subunit, partial [Liriodendron
           tulipifera]
          Length = 1010

 Score =  271 bits (693), Expect = 2e-82
 Identities = 133/154 (86%), Positives = 141/154 (91%)
 Frame = +1

Query: 1   PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
           PVKK RGGCGAQQP +T++GMKM+AEYKA +KK+DD EQLPEPVERKQQLSAERVLSVLK
Sbjct: 82  PVKKRRGGCGAQQPKLTVEGMKMIAEYKATRKKNDDQEQLPEPVERKQQLSAERVLSVLK 141

Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
           RISDEDCLLLGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 142 RISDEDCLLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 201

Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 462
           NENLRRQERNGAPAHII+EFAQLLQFHIATYFDN
Sbjct: 202 NENLRRQERNGAPAHIISEFAQLLQFHIATYFDN 235