BLASTX nr result
ID: Ophiopogon23_contig00018293
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00018293
(706 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020276974.1| DNA mismatch repair protein MSH6-like isofor... 77 2e-12
ref|XP_020276973.1| DNA mismatch repair protein MSH6-like isofor... 77 2e-12
ref|XP_020276972.1| DNA mismatch repair protein MSH6-like isofor... 77 2e-12
gb|ONK67179.1| uncharacterized protein A4U43_C06F16950, partial ... 75 1e-11
ref|XP_020269981.1| DNA mismatch repair protein MSH6 isoform X4 ... 75 1e-11
ref|XP_020269980.1| DNA mismatch repair protein MSH6 isoform X3 ... 75 1e-11
ref|XP_020269979.1| DNA mismatch repair protein MSH6 isoform X2 ... 75 1e-11
ref|XP_020269977.1| DNA mismatch repair protein MSH6 isoform X1 ... 75 1e-11
ref|XP_010932609.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 73 4e-11
ref|XP_008800758.1| PREDICTED: DNA mismatch repair protein MSH6 ... 71 2e-10
gb|OAY70755.1| DNA mismatch repair protein MSH6, partial [Ananas... 70 4e-10
ref|XP_020114589.1| DNA mismatch repair protein MSH6 [Ananas com... 69 8e-10
gb|PKA65146.1| DNA mismatch repair protein MSH6 [Apostasia shenz... 68 3e-09
gb|PNY06833.1| DNA mismatch repair protein msh6-like [Trifolium ... 67 6e-09
ref|XP_016507671.1| PREDICTED: DNA mismatch repair protein MSH6-... 67 6e-09
ref|XP_009598024.1| PREDICTED: DNA mismatch repair protein MSH6 ... 67 6e-09
ref|XP_019240086.1| PREDICTED: DNA mismatch repair protein MSH6 ... 67 6e-09
ref|XP_009401272.1| PREDICTED: DNA mismatch repair protein MSH6 ... 66 8e-09
ref|XP_020234813.1| DNA mismatch repair protein MSH6 [Cajanus ca... 66 1e-08
gb|KYP47569.1| DNA mismatch repair protein Msh6-1 [Cajanus cajan] 66 1e-08
>ref|XP_020276974.1| DNA mismatch repair protein MSH6-like isoform X3 [Asparagus
officinalis]
Length = 943
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = -3
Query: 194 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM 30
HCLC ILS+ + VEIIKPS LSLETE VLK HTR+PLI NL+P+LE DAEKT+
Sbjct: 158 HCLCSILSELRPVEIIKPSKFLSLETEMVLKYHTRDPLINNLIPSLEFWDAEKTI 212
>ref|XP_020276973.1| DNA mismatch repair protein MSH6-like isoform X2 [Asparagus
officinalis]
Length = 1219
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = -3
Query: 194 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM 30
HCLC ILS+ + VEIIKPS LSLETE VLK HTR+PLI NL+P+LE DAEKT+
Sbjct: 443 HCLCSILSELRPVEIIKPSKFLSLETEMVLKYHTRDPLINNLIPSLEFWDAEKTI 497
>ref|XP_020276972.1| DNA mismatch repair protein MSH6-like isoform X1 [Asparagus
officinalis]
gb|ONK60807.1| uncharacterized protein A4U43_C08F22830 [Asparagus officinalis]
Length = 1228
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = -3
Query: 194 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM 30
HCLC ILS+ + VEIIKPS LSLETE VLK HTR+PLI NL+P+LE DAEKT+
Sbjct: 443 HCLCSILSELRPVEIIKPSKFLSLETEMVLKYHTRDPLINNLIPSLEFWDAEKTI 497
>gb|ONK67179.1| uncharacterized protein A4U43_C06F16950, partial [Asparagus
officinalis]
Length = 976
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = -3
Query: 194 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM 30
HCLC ILS+ + VEIIKPS LLS ETE VLK HTRNPLI NLVP+ E DA+KT+
Sbjct: 511 HCLCSILSELRPVEIIKPSELLSPETENVLKYHTRNPLINNLVPSAEFWDAKKTI 565
>ref|XP_020269981.1| DNA mismatch repair protein MSH6 isoform X4 [Asparagus officinalis]
Length = 1309
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = -3
Query: 194 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM 30
HCLC ILS+ + VEIIKPS LLS ETE VLK HTRNPLI NLVP+ E DA+KT+
Sbjct: 508 HCLCSILSELRPVEIIKPSELLSPETENVLKYHTRNPLINNLVPSAEFWDAKKTI 562
>ref|XP_020269980.1| DNA mismatch repair protein MSH6 isoform X3 [Asparagus officinalis]
Length = 1311
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = -3
Query: 194 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM 30
HCLC ILS+ + VEIIKPS LLS ETE VLK HTRNPLI NLVP+ E DA+KT+
Sbjct: 510 HCLCSILSELRPVEIIKPSELLSPETENVLKYHTRNPLINNLVPSAEFWDAKKTI 564
>ref|XP_020269979.1| DNA mismatch repair protein MSH6 isoform X2 [Asparagus officinalis]
Length = 1312
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = -3
Query: 194 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM 30
HCLC ILS+ + VEIIKPS LLS ETE VLK HTRNPLI NLVP+ E DA+KT+
Sbjct: 511 HCLCSILSELRPVEIIKPSELLSPETENVLKYHTRNPLINNLVPSAEFWDAKKTI 565
>ref|XP_020269977.1| DNA mismatch repair protein MSH6 isoform X1 [Asparagus officinalis]
Length = 1314
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = -3
Query: 194 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM 30
HCLC ILS+ + VEIIKPS LLS ETE VLK HTRNPLI NLVP+ E DA+KT+
Sbjct: 513 HCLCSILSELRPVEIIKPSELLSPETENVLKYHTRNPLINNLVPSAEFWDAKKTI 567
>ref|XP_010932609.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH6
[Elaeis guineensis]
Length = 1288
Score = 73.2 bits (178), Expect = 4e-11
Identities = 39/61 (63%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
Frame = -3
Query: 194 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM--VRS 21
HCLC ILS+ + VEIIKPS +LS ETE+VL+N+TRNPL+ +LVP E DAEKT+ VR
Sbjct: 506 HCLCSILSELRPVEIIKPSKVLSPETERVLRNNTRNPLVNDLVPFTEFWDAEKTIGEVRK 565
Query: 20 Y 18
Y
Sbjct: 566 Y 566
>ref|XP_008800758.1| PREDICTED: DNA mismatch repair protein MSH6 [Phoenix dactylifera]
Length = 1292
Score = 71.2 bits (173), Expect = 2e-10
Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
Frame = -3
Query: 194 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM--VRS 21
HCLC ILS+ + VEIIKPS +LS ETE+VL+N+TRNPL+ +LVP E DAEK + VR
Sbjct: 502 HCLCSILSELRPVEIIKPSKVLSPETERVLRNNTRNPLVNDLVPFTEFWDAEKAIGEVRK 561
Query: 20 Y 18
Y
Sbjct: 562 Y 562
>gb|OAY70755.1| DNA mismatch repair protein MSH6, partial [Ananas comosus]
Length = 1101
Score = 70.1 bits (170), Expect = 4e-10
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = -3
Query: 194 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM 30
H LC ILS+ + VE+IKPS LLS ETE+VLKN+TRNPL +L+P +E DAEKT+
Sbjct: 448 HSLCSILSELRPVEVIKPSKLLSPETERVLKNNTRNPLFNDLIPNVEFWDAEKTI 502
>ref|XP_020114589.1| DNA mismatch repair protein MSH6 [Ananas comosus]
Length = 1299
Score = 69.3 bits (168), Expect = 8e-10
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = -3
Query: 194 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM 30
H LC ILS+ + VE+IKPS +LS ETE+VLKN+TRNPL +L+P +E DAEKT+
Sbjct: 524 HSLCSILSELRPVEVIKPSKMLSPETERVLKNNTRNPLFNDLIPNVEFWDAEKTI 578
>gb|PKA65146.1| DNA mismatch repair protein MSH6 [Apostasia shenzhenica]
Length = 1478
Score = 67.8 bits (164), Expect = 3e-09
Identities = 33/56 (58%), Positives = 45/56 (80%)
Frame = -3
Query: 194 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTMV 27
HCLC ILS+ + VEI+KPS +L ETE+VL +TR+PL+ +LVP+LE DAEKT++
Sbjct: 619 HCLCSILSELRPVEILKPSKVLGPETERVLMQNTRSPLVNDLVPSLEFWDAEKTIL 674
>gb|PNY06833.1| DNA mismatch repair protein msh6-like [Trifolium pratense]
Length = 1284
Score = 66.6 bits (161), Expect = 6e-09
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = -3
Query: 188 LCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM 30
LC ILS+ + VEI+KP+ LLS ETE+VL HTRNPL+ L+PT+E DA+KT+
Sbjct: 510 LCSILSEVRPVEIVKPAKLLSAETERVLLKHTRNPLVNELIPTVEFWDADKTL 562
>ref|XP_016507671.1| PREDICTED: DNA mismatch repair protein MSH6-like [Nicotiana
tabacum]
Length = 1306
Score = 66.6 bits (161), Expect = 6e-09
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = -3
Query: 188 LCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTMVRSYTVI 9
LC +LS+ + VEIIKP+ LLSLETE+VL HTRNPL+ LVP E DAE+T+ +
Sbjct: 518 LCCLLSELRPVEIIKPAKLLSLETERVLLRHTRNPLVNELVPVSEFWDAERTICEVKAIY 577
Query: 8 EN 3
N
Sbjct: 578 RN 579
>ref|XP_009598024.1| PREDICTED: DNA mismatch repair protein MSH6 [Nicotiana
tomentosiformis]
Length = 1306
Score = 66.6 bits (161), Expect = 6e-09
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = -3
Query: 188 LCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTMVRSYTVI 9
LC +LS+ + VEIIKP+ LLSLETE+VL HTRNPL+ LVP E DAE+T+ +
Sbjct: 518 LCCLLSELRPVEIIKPAKLLSLETERVLLRHTRNPLVNELVPVSEFWDAERTICEVKAIY 577
Query: 8 EN 3
N
Sbjct: 578 RN 579
>ref|XP_019240086.1| PREDICTED: DNA mismatch repair protein MSH6 [Nicotiana attenuata]
gb|OIT20505.1| dna mismatch repair protein msh6 [Nicotiana attenuata]
Length = 1318
Score = 66.6 bits (161), Expect = 6e-09
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = -3
Query: 188 LCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTMVRSYTVI 9
LC +LS+ + VEIIKP+ LLSLETE+VL HTRNPL+ LVP E DAE+T+ +
Sbjct: 531 LCCLLSELRPVEIIKPAKLLSLETERVLLRHTRNPLVNELVPVSEFWDAERTICEVKAIY 590
Query: 8 EN 3
N
Sbjct: 591 RN 592
>ref|XP_009401272.1| PREDICTED: DNA mismatch repair protein MSH6 [Musa acuminata subsp.
malaccensis]
Length = 1279
Score = 66.2 bits (160), Expect = 8e-09
Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -3
Query: 194 HCLCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM--VRS 21
H LC ILS+ + VE+IKPS LS ETE+V+KN+TRNPL+ NL+P E DAE+T+ +R
Sbjct: 493 HWLCSILSELRPVEVIKPSKALSPETERVIKNNTRNPLVNNLLPFDEFWDAERTINEIRK 552
Query: 20 Y 18
Y
Sbjct: 553 Y 553
>ref|XP_020234813.1| DNA mismatch repair protein MSH6 [Cajanus cajan]
Length = 1261
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = -3
Query: 188 LCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM 30
LC ILS+ + VEI+KP+ LLS ETE+VL+ HTRNPL+ LVP +E DA+KT+
Sbjct: 490 LCCILSEIRPVEIVKPAKLLSAETERVLQKHTRNPLVNELVPIVEFWDADKTV 542
>gb|KYP47569.1| DNA mismatch repair protein Msh6-1 [Cajanus cajan]
Length = 1262
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = -3
Query: 188 LCLILSK*QHVEIIKPSLLLSLETEKVLKNHTRNPLIKNLVPTLEC*DAEKTM 30
LC ILS+ + VEI+KP+ LLS ETE+VL+ HTRNPL+ LVP +E DA+KT+
Sbjct: 490 LCCILSEIRPVEIVKPAKLLSAETERVLQKHTRNPLVNELVPIVEFWDADKTV 542