BLASTX nr result

ID: Ophiopogon23_contig00017720 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00017720
         (432 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK65228.1| uncharacterized protein A4U43_C07F34990 [Asparagu...    82   2e-16
ref|XP_020264830.1| DEAD-box ATP-dependent RNA helicase 14-like ...    82   3e-15
ref|XP_009414695.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...    60   1e-07

>gb|ONK65228.1| uncharacterized protein A4U43_C07F34990 [Asparagus officinalis]
          Length = 201

 Score = 82.0 bits (201), Expect = 2e-16
 Identities = 53/129 (41%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
 Frame = -2

Query: 425 SPVPYSPQQHKSSSYDDGEIRDDRHDPPSLAAGGQDRSRSPVQSREDXXXXXXXXXXXXX 246
           SP+   P +   +SYDDGEIRDD+              RS + S +              
Sbjct: 104 SPIRGQPSRRSPASYDDGEIRDDQ------------LHRSEIPSDDPAP----------- 140

Query: 245 XXPYIDNGRPEGSPSPGRWRQKSPSYPNGVEGPSNKN--RPARLAYNGEEEEEGMILPDE 72
              Y+DN R E SPSP  W QK  +       PSN    RP R A  G+E EEGMI+P+E
Sbjct: 141 ---YVDNERREASPSPISWHQKFQN-----PRPSNDEPVRPQRSATGGDEAEEGMIMPEE 192

Query: 71  EEGMIHPDE 45
           EEGMIHPDE
Sbjct: 193 EEGMIHPDE 201


>ref|XP_020264830.1| DEAD-box ATP-dependent RNA helicase 14-like [Asparagus officinalis]
          Length = 740

 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 53/129 (41%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
 Frame = -2

Query: 425 SPVPYSPQQHKSSSYDDGEIRDDRHDPPSLAAGGQDRSRSPVQSREDXXXXXXXXXXXXX 246
           SP+   P +   +SYDDGEIRDD+              RS + S +              
Sbjct: 643 SPIRDQPSRRSPASYDDGEIRDDQ------------LHRSEIPSDDPAP----------- 679

Query: 245 XXPYIDNGRPEGSPSPGRWRQKSPSYPNGVEGPSNKN--RPARLAYNGEEEEEGMILPDE 72
              Y+DN R E SPSP  W QK          PSN    RP R A  G+E EEGMI+P+E
Sbjct: 680 ---YVDNERREASPSPISWHQKFQK-----PRPSNDEPVRPQRSATGGDEAEEGMIMPEE 731

Query: 71  EEGMIHPDE 45
           EEGMIHPDE
Sbjct: 732 EEGMIHPDE 740


>ref|XP_009414695.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase-like
            protein DB10 [Musa acuminata subsp. malaccensis]
          Length = 820

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 45/133 (33%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
 Frame = -2

Query: 431  DRSPVPYSPQQHKSSSYDD--GEIRDDRHDPPSLAAGGQDRSRSPVQSREDXXXXXXXXX 258
            DRSP+ Y   Q +  SYD   G   +  H P    +   + SRSP               
Sbjct: 695  DRSPMQYYEDQQRPQSYDGEHGRKAELDHSP----SPHDEISRSP--------------- 735

Query: 257  XXXXXXPYIDNGRPEGSPSPGRWRQKSPSYPNGVEGPSNKNRPARLAYNGEEEEEGMILP 78
                    IDNGR +GSP  G W   S       E P  ++ P +    G EEEEGMI  
Sbjct: 736  -----HSIIDNGRSQGSPGQGPWPAGSSPRNGDTEQPIPRSPPLQNNKCGGEEEEGMIPA 790

Query: 77   DEEEGMIHPDEDA 39
            DEE+G+I  +ED+
Sbjct: 791  DEEDGVIPLEEDS 803


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