BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00017467
         (573 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020268608.1| pentatricopeptide repeat-containing protein ...   122   7e-29
ref|XP_010905037.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_008790140.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09

>ref|XP_020268608.1| pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic [Asparagus officinalis]
 gb|ONK68951.1| uncharacterized protein A4U43_C05F17740 [Asparagus officinalis]
          Length = 957

 Score =  122 bits (307), Expect = 7e-29
 Identities = 78/191 (40%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
 Frame = +2

Query: 2   MGSLRFSAVPDIYESKRCKLLGNFDPNVVKCVGHNLWTSHAGXXXXXXXXXXXXXXXXXF 181
           MGSLRF A P+IYES+R KLLG FDP V     H+L +S  G                  
Sbjct: 1   MGSLRFGAAPEIYESRRSKLLGQFDPYV-----HSLCSSQFGVGLLVYRKKIVRLDAERL 55

Query: 182 CGFFVHRRGENSSSLKISDIVGLTRCKKTVVHGLEANVGSVESNKECNAAVIGESLTLK- 358
            GF  H+R + S  + + +     R ++T+V GLEA+ GS + NK+ + A++GE LTL  
Sbjct: 56  FGFSFHQRKKKSLKILVINSNPNGRFQQTLVDGLEASEGS-QLNKDSDEALVGEGLTLMM 114

Query: 359 NPVSNSVEVQNKINEDIVGKKNERKIWRRVVAMNKTXXXXXXXXXSKRNEELVEYAKRKS 538
           NP++NSVE+Q+K + + V KK+ RKIW RVV MNKT         S RN + +E  K  S
Sbjct: 115 NPITNSVEIQSKSDANNVLKKSGRKIWSRVVNMNKTVQRRGKKRVSTRNNQSLERTKDSS 174

Query: 539 DRPEIFVSTIK 571
           ++ +  +STI+
Sbjct: 175 NQIKDALSTIR 185


>ref|XP_010905037.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic [Elaeis guineensis]
          Length = 982

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 61/198 (30%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
 Frame = +2

Query: 2   MGSLRFSAVPDIYESKRCKLLGNFDPNVVKCVGHNLWTSHAGXXXXXXXXXXXXXXXXXF 181
           M SL+  AVP+IYESKRC    N     V C+G N   SH                   +
Sbjct: 1   MDSLKSCAVPEIYESKRCNFWRNSYLYGVDCIGLNSSVSHISIRFAGDRKKIVKGDVRCY 60

Query: 182 CGFFVHRRGENSSSLKISDI----VGLTR---------CKKTVVHGLEANVG-------- 298
            GF V  R +  SS    +     VG +R          +  VV GLE   G        
Sbjct: 61  -GFCVDCRVDKCSSSSFPETQFASVGGSRRWDHNPKIRLQHIVVRGLEGIGGPRSASEFV 119

Query: 299 -SVESNKECNAAVIGESLTLKNPVSNSVEVQNKINEDIVGKKNERKIWRRVVAMNKTXXX 475
            + +S++  +AA +  SLT KNPV N +EV NK  +D   +K+ RKIW R + + K    
Sbjct: 120 KNPQSSQAGDAAFLDVSLTPKNPVPNLMEVPNKALKDGAERKSGRKIWNRFLGIKKAAQR 179

Query: 476 XXXXXXSKRNEELVEYAK 529
                   R  +++E+ K
Sbjct: 180 KVSRPVFTRKGQILEHVK 197


>ref|XP_008790140.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic [Phoenix dactylifera]
          Length = 982

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 67/213 (31%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
 Frame = +2

Query: 2   MGSLRFSAVPDIYESKRCKLLGNFDPNVVKCVGHNLWTSHAGXXXXXXXXXXXXXXXXXF 181
           M SL+F AV +IYESKRC   GN     V  VG N   SH                   +
Sbjct: 1   MDSLKFCAVREIYESKRCNFGGNSYLYGVDWVGLNSSVSHISIRFVGDRKKIVQGDMRCY 60

Query: 182 CGFFVHRRGENSSSLKISDI----VGLTR---------CKKTVVHG---------LEANV 295
            GF V  R +  SSL   +     VG TR          K  VV G          +  V
Sbjct: 61  -GFCVDCRVDKCSSLSFPETRFSSVGGTRRWDHNPKIRLKHIVVRGSGVIGGPQSADEFV 119

Query: 296 GSVESNKECNAAVIGESLTLKNPVSNSVEVQNKINEDIVGKKNERKIWRRVVAMNKTXXX 475
              +S++  +AA++  SLTLK+PV N  EV NK+ +D   +K+ RKI  R + + K    
Sbjct: 120 KKSQSSQADDAALLDVSLTLKDPVPNLTEVPNKVLKDSAERKSGRKIRNRFLGIKKAAQR 179

Query: 476 XXXXXXSKRNEELVEYAKRKSDRP-EIFVSTIK 571
                   R  ++ E    K+DR  E+ +S I+
Sbjct: 180 KVCRPVFTRKGQIFEQV--KNDRKLEVALSAIE 210