BLASTX nr result
ID: Ophiopogon23_contig00016702
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00016702
(375 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020261235.1| heterogeneous nuclear ribonucleoprotein Q-li... 110 1e-25
ref|XP_010933278.1| PREDICTED: heterogeneous nuclear ribonucleop... 95 3e-20
gb|PKA48096.1| Polyadenylate-binding protein 5 [Apostasia shenzh... 90 3e-18
ref|XP_008812339.1| PREDICTED: heterogeneous nuclear ribonucleop... 87 2e-17
ref|XP_010943899.1| PREDICTED: nucleolin-like [Elaeis guineensis... 84 3e-16
ref|XP_008802868.1| PREDICTED: nucleolin-like [Phoenix dactylifera] 82 9e-16
ref|XP_020674592.1| heterogeneous nuclear ribonucleoprotein R-li... 79 2e-14
ref|XP_020582085.1| nucleolin-like [Phalaenopsis equestris] 79 2e-14
ref|XP_020095723.1| heterogeneous nuclear ribonucleoprotein Q-li... 76 2e-13
ref|XP_020095721.1| nucleolin-like isoform X1 [Ananas comosus] >... 76 2e-13
ref|XP_009390670.1| PREDICTED: heterogeneous nuclear ribonucleop... 69 4e-11
ref|XP_009390662.1| PREDICTED: heterogeneous nuclear ribonucleop... 69 4e-11
>ref|XP_020261235.1| heterogeneous nuclear ribonucleoprotein Q-like [Asparagus
officinalis]
gb|ONK72154.1| uncharacterized protein A4U43_C04F16350 [Asparagus officinalis]
Length = 557
Score = 110 bits (275), Expect = 1e-25
Identities = 60/124 (48%), Positives = 66/124 (53%)
Frame = -2
Query: 374 GRGFGRGRFPSHSAXXXXXXXXXXXXXXXXXXXFAADNEFETSYSEFXXXXXXXXXXXXX 195
GRGFGRGRFPSH A F AD +F+ SYS+F
Sbjct: 368 GRGFGRGRFPSHRAGFQGGRGFIPRGRGRGRFPFVADADFDDSYSDFRGGWRPFGARGGR 427
Query: 194 RISTSARRGGFDRGRGKIXXXXXXXXXXXEDHNRHFGPSHFGEDPYFYGDVGQGMKRPFS 15
RI TSARRGGFDRGRG+ +D FGP H EDPYFYG GQG+KRPFS
Sbjct: 428 RIPTSARRGGFDRGRGRAFPIQRQPFPPEQDFGGPFGPRHIAEDPYFYGGGGQGIKRPFS 487
Query: 14 MMEH 3
MMEH
Sbjct: 488 MMEH 491
>ref|XP_010933278.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Elaeis
guineensis]
ref|XP_019709278.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Elaeis
guineensis]
Length = 749
Score = 95.1 bits (235), Expect = 3e-20
Identities = 56/125 (44%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = -2
Query: 374 GRGFGRGRFPSHSAXXXXXXXXXXXXXXXXXXXF-AADNEFETSYSEFXXXXXXXXXXXX 198
GRGFGRGR+ SH A A++ ET SEF
Sbjct: 560 GRGFGRGRYFSHRAGFHGGRGFNFRGRGRSGRFSFTAEDNLETPPSEFYGRRPFGFRGGR 619
Query: 197 XRISTSARRGGFDRGRGKIXXXXXXXXXXXEDHNRHFGPSHFGEDPYFYGDVGQGMKRPF 18
+STSAR G FDRGRG+ E+ R FG HFGEDPYFYGDVG G+KRPF
Sbjct: 620 A-VSTSARHGAFDRGRGRAFPSRRLPYPPKEEFGRPFGARHFGEDPYFYGDVGHGIKRPF 678
Query: 17 SMMEH 3
SMMEH
Sbjct: 679 SMMEH 683
>gb|PKA48096.1| Polyadenylate-binding protein 5 [Apostasia shenzhenica]
Length = 824
Score = 89.7 bits (221), Expect = 3e-18
Identities = 51/124 (41%), Positives = 57/124 (45%)
Frame = -2
Query: 374 GRGFGRGRFPSHSAXXXXXXXXXXXXXXXXXXXFAADNEFETSYSEFXXXXXXXXXXXXX 195
GRGFGRGRFPS+ A + E+SY EF
Sbjct: 636 GRGFGRGRFPSNRAGFLGGRGFYPRGRGRGGRFPYVGDGMESSYPEFHGWRPYGSRGGRR 695
Query: 194 RISTSARRGGFDRGRGKIXXXXXXXXXXXEDHNRHFGPSHFGEDPYFYGDVGQGMKRPFS 15
TS R G FDRGRG+ D + FG HFGED YFYGD G G+KRPFS
Sbjct: 696 GF-TSGRLGAFDRGRGRAFPARRPPFPPEGDFGQPFGAPHFGEDSYFYGDGGHGLKRPFS 754
Query: 14 MMEH 3
MMEH
Sbjct: 755 MMEH 758
>ref|XP_008812339.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Phoenix
dactylifera]
Length = 746
Score = 87.4 bits (215), Expect = 2e-17
Identities = 53/125 (42%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Frame = -2
Query: 374 GRGFGRGRFPSHSAXXXXXXXXXXXXXXXXXXXF-AADNEFETSYSEFXXXXXXXXXXXX 198
GRGFGRGR+ SH A A++ E SEF
Sbjct: 557 GRGFGRGRYFSHRAGFQGGRGFNFRGYGRGGRFSFPAEDNLEIPPSEFHGRRPFGFRGGG 616
Query: 197 XRISTSARRGGFDRGRGKIXXXXXXXXXXXEDHNRHFGPSHFGEDPYFYGDVGQGMKRPF 18
+STSAR G FDRGRG+ E+ FG H GEDPYFYGDVG G+KRPF
Sbjct: 617 R-VSTSARHGAFDRGRGRAFPSRRPPYLPEEEFGGPFGSRHLGEDPYFYGDVGHGIKRPF 675
Query: 17 SMMEH 3
SMMEH
Sbjct: 676 SMMEH 680
>ref|XP_010943899.1| PREDICTED: nucleolin-like [Elaeis guineensis]
ref|XP_010943900.1| PREDICTED: nucleolin-like [Elaeis guineensis]
Length = 767
Score = 84.0 bits (206), Expect = 3e-16
Identities = 52/125 (41%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = -2
Query: 374 GRGFGRGRFPSHSAXXXXXXXXXXXXXXXXXXXF-AADNEFETSYSEFXXXXXXXXXXXX 198
GRGFGR R+ SH A A++ E SEF
Sbjct: 578 GRGFGRARYFSHRAGFQGGRGFNFRGRGRGGRFSFPAEDNLEIPPSEFHGRRPFGFRGGG 637
Query: 197 XRISTSARRGGFDRGRGKIXXXXXXXXXXXEDHNRHFGPSHFGEDPYFYGDVGQGMKRPF 18
ISTSAR G FDRGRG+ E+ FG H GEDPYFYG+VG G+KRPF
Sbjct: 638 R-ISTSARHGAFDRGRGRAFPSRRPPYRPEEEFGAPFGARHLGEDPYFYGNVGHGIKRPF 696
Query: 17 SMMEH 3
SMMEH
Sbjct: 697 SMMEH 701
>ref|XP_008802868.1| PREDICTED: nucleolin-like [Phoenix dactylifera]
Length = 755
Score = 82.4 bits (202), Expect = 9e-16
Identities = 51/125 (40%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Frame = -2
Query: 374 GRGFGRGRFPSHSAXXXXXXXXXXXXXXXXXXXF-AADNEFETSYSEFXXXXXXXXXXXX 198
GRGFGRGR+ SH A ++ E SEF
Sbjct: 566 GRGFGRGRYVSHRAGFHGRRGFNFRWRGRGGRFSFPPEDNSEIPPSEFHDRRPFGFRGGR 625
Query: 197 XRISTSARRGGFDRGRGKIXXXXXXXXXXXEDHNRHFGPSHFGEDPYFYGDVGQGMKRPF 18
+STSAR G FDRGRG+ E+ FG H GEDPYFYGDVG G+KR F
Sbjct: 626 G-VSTSARHGAFDRGRGRAFPSRRPPYLPEEEFGGPFGARHLGEDPYFYGDVGHGIKRSF 684
Query: 17 SMMEH 3
SMMEH
Sbjct: 685 SMMEH 689
>ref|XP_020674592.1| heterogeneous nuclear ribonucleoprotein R-like [Dendrobium
catenatum]
gb|PKU72842.1| Polyadenylate-binding protein 5 [Dendrobium catenatum]
Length = 767
Score = 78.6 bits (192), Expect = 2e-14
Identities = 47/123 (38%), Positives = 55/123 (44%)
Frame = -2
Query: 374 GRGFGRGRFPSHSAXXXXXXXXXXXXXXXXXXXFAADNEFETSYSEFXXXXXXXXXXXXX 195
GRGFGRGRFPS+ A A ++ E Y EF
Sbjct: 579 GRGFGRGRFPSNRAGFQGGRGFYPRGRGRGGRFSHASDDVEMPYPEFHGWRPYGVRGGRR 638
Query: 194 RISTSARRGGFDRGRGKIXXXXXXXXXXXEDHNRHFGPSHFGEDPYFYGDVGQGMKRPFS 15
STS R G FDRG G+ D HFG + FGEDPY+YG G+KRPFS
Sbjct: 639 G-STSGRVGAFDRGLGRGFPSRRPPYTPEGDFGGHFGTTQFGEDPYYYGGGRGGLKRPFS 697
Query: 14 MME 6
+ME
Sbjct: 698 VME 700
>ref|XP_020582085.1| nucleolin-like [Phalaenopsis equestris]
Length = 800
Score = 78.6 bits (192), Expect = 2e-14
Identities = 49/126 (38%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Frame = -2
Query: 374 GRGFGRGRFPSHSAXXXXXXXXXXXXXXXXXXXFAA--DNEFETSYSEFXXXXXXXXXXX 201
GRGF RGRFPS+ A +A DNE + + +
Sbjct: 615 GRGFVRGRFPSNRAGFQGSRGFYPRGRGRGGRFSSASVDNEMPSEFHGWRPYGVQGGRRG 674
Query: 200 XXRISTSARRGGFDRGRGKIXXXXXXXXXXXEDHNRHFGPSHFGEDPYFYGDVGQGMKRP 21
STS R G FDRGRG+ D + HFG + FGEDPYFYG G+G+KRP
Sbjct: 675 ----STSGRLGAFDRGRGRGFPSRRPPYSQEGDFSGHFGAAQFGEDPYFYGG-GRGLKRP 729
Query: 20 FSMMEH 3
FSM+EH
Sbjct: 730 FSMLEH 735
>ref|XP_020095723.1| heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Ananas
comosus]
Length = 733
Score = 75.9 bits (185), Expect = 2e-13
Identities = 48/125 (38%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = -2
Query: 374 GRGFGRGR-FPSHSAXXXXXXXXXXXXXXXXXXXFAADNEFETSYSEFXXXXXXXXXXXX 198
GRGFGRGR FP+ + ADN FE S F
Sbjct: 547 GRGFGRGRSFPNRAGFHGNRGFNLHGRGRTGRFI--ADNSFENSSFNFQGRRPFGFRGGR 604
Query: 197 XRISTSARRGGFDRGRGKIXXXXXXXXXXXEDHNRHFGPSHFGEDPYFYGDVGQGMKRPF 18
S S RRG FD G G+ D RH+G +H GEDPYFYGD G+KRPF
Sbjct: 605 WG-SGSGRRGAFDGGWGRGFPPRRPQFPPQGDFGRHYGATHLGEDPYFYGDFSHGVKRPF 663
Query: 17 SMMEH 3
S ME+
Sbjct: 664 SAMEY 668
>ref|XP_020095721.1| nucleolin-like isoform X1 [Ananas comosus]
ref|XP_020095722.1| nucleolin-like isoform X1 [Ananas comosus]
Length = 734
Score = 75.9 bits (185), Expect = 2e-13
Identities = 48/125 (38%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = -2
Query: 374 GRGFGRGR-FPSHSAXXXXXXXXXXXXXXXXXXXFAADNEFETSYSEFXXXXXXXXXXXX 198
GRGFGRGR FP+ + ADN FE S F
Sbjct: 548 GRGFGRGRSFPNRAGFHGNRGFNLHGRGRTGRFI--ADNSFENSSFNFQGRRPFGFRGGR 605
Query: 197 XRISTSARRGGFDRGRGKIXXXXXXXXXXXEDHNRHFGPSHFGEDPYFYGDVGQGMKRPF 18
S S RRG FD G G+ D RH+G +H GEDPYFYGD G+KRPF
Sbjct: 606 WG-SGSGRRGAFDGGWGRGFPPRRPQFPPQGDFGRHYGATHLGEDPYFYGDFSHGVKRPF 664
Query: 17 SMMEH 3
S ME+
Sbjct: 665 SAMEY 669
>ref|XP_009390670.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 719
Score = 69.3 bits (168), Expect = 4e-11
Identities = 47/125 (37%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Frame = -2
Query: 374 GRGFGRGRFPSHSAXXXXXXXXXXXXXXXXXXXF-AADNEFETSYSEFXXXXXXXXXXXX 198
GRGFGRGRFPS A AAD+ E S +EF
Sbjct: 532 GRGFGRGRFPSFRAGFQGGRGFNFRGRGRGGRFSFAADSGLEGSSTEFQFRRPFGGRGGR 591
Query: 197 XRISTSARRGGFDRGRGKIXXXXXXXXXXXEDHNRHFGPSHFGEDPYFYGDVGQGMKRPF 18
R+G F RGRG+ E+ R F + GE+PYFYGD G+G+KRPF
Sbjct: 592 GFFFPG-RQGAF-RGRGQPFSSRRPPFQPEEEFGRPFSGRYVGEEPYFYGDAGRGIKRPF 649
Query: 17 SMMEH 3
SMM+H
Sbjct: 650 SMMDH 654
>ref|XP_009390662.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 723
Score = 69.3 bits (168), Expect = 4e-11
Identities = 47/125 (37%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Frame = -2
Query: 374 GRGFGRGRFPSHSAXXXXXXXXXXXXXXXXXXXF-AADNEFETSYSEFXXXXXXXXXXXX 198
GRGFGRGRFPS A AAD+ E S +EF
Sbjct: 532 GRGFGRGRFPSFRAGFQGGRGFNFRGRGRGGRFSFAADSGLEGSSTEFQFRRPFGGRGGR 591
Query: 197 XRISTSARRGGFDRGRGKIXXXXXXXXXXXEDHNRHFGPSHFGEDPYFYGDVGQGMKRPF 18
R+G F RGRG+ E+ R F + GE+PYFYGD G+G+KRPF
Sbjct: 592 GFFFPG-RQGAF-RGRGQPFSSRRPPFQPEEEFGRPFSGRYVGEEPYFYGDAGRGIKRPF 649
Query: 17 SMMEH 3
SMM+H
Sbjct: 650 SMMDH 654