BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00015958
         (1327 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK73338.1| uncharacterized protein A4U43_C04F29910 [Asparagu...   472   e-150
ref|XP_020262150.1| DNA-directed RNA polymerase IV subunit 1 [As...   472   e-150
dbj|BAS90582.1| Os04g0572600, partial [Oryza sativa Japonica Group]   319   e-101
dbj|BAF15523.1| Os04g0572600 [Oryza sativa Japonica Group]            318   e-101
ref|XP_020572389.1| DNA-directed RNA polymerase IV subunit 1 iso...   332   1e-98
ref|XP_020572386.1| DNA-directed RNA polymerase IV subunit 1 iso...   332   2e-98
ref|XP_020681066.1| DNA-directed RNA polymerase IV subunit 1 iso...   328   5e-97
ref|XP_020681065.1| DNA-directed RNA polymerase IV subunit 1 iso...   328   7e-97
ref|XP_020084502.1| DNA-directed RNA polymerase IV subunit 1 iso...   325   1e-96
ref|XP_020084500.1| DNA-directed RNA polymerase IV subunit 1 iso...   325   1e-95
gb|OAY84267.1| DNA-directed RNA polymerase IV subunit 1 [Ananas ...   325   1e-95
ref|XP_020165521.1| DNA-directed RNA polymerase IV subunit 1 iso...   323   2e-95
ref|XP_020165520.1| DNA-directed RNA polymerase IV subunit 1 iso...   323   2e-95
ref|XP_004970758.1| DNA-directed RNA polymerase IV subunit 1 iso...   318   1e-94
ref|XP_015637043.1| PREDICTED: DNA-directed RNA polymerase IV su...   319   1e-94
gb|KQL07953.1| hypothetical protein SETIT_0000652mg, partial [Se...   318   3e-94
ref|XP_015637042.1| PREDICTED: DNA-directed RNA polymerase IV su...   319   6e-94
ref|XP_015637041.1| PREDICTED: DNA-directed RNA polymerase IV su...   319   6e-94
ref|XP_015637040.1| PREDICTED: DNA-directed RNA polymerase IV su...   319   6e-94
ref|XP_015637039.1| PREDICTED: DNA-directed RNA polymerase IV su...   319   6e-94

>gb|ONK73338.1| uncharacterized protein A4U43_C04F29910 [Asparagus officinalis]
          Length = 1445

 Score =  472 bits (1215), Expect = e-150
 Identities = 231/362 (63%), Positives = 278/362 (76%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRL 1148
            KGF EFKQVDILWDS  KPDG+L +K+ M +SC  R FW  LQ+AC+PIMD+IDW RS  
Sbjct: 1082 KGFTEFKQVDILWDSHSKPDGELIVKVTMAKSCALRNFWHALQNACIPIMDLIDWGRSHP 1141

Query: 1147 DGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGI 968
            DG +DIS+ FGI+S+Y+YFL SLKS +SDIGRNIHLEHLLLVSDSLSVTGEFHGL+AK +
Sbjct: 1142 DGVYDISNAFGIVSAYNYFLRSLKSTISDIGRNIHLEHLLLVSDSLSVTGEFHGLTAKAL 1201

Query: 967  KQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKI 788
            KQQ+AHLSIS+PFT+ACFSNPEK FI+AAK    D+L GTVDAVAWGQEAPVGTGG FK+
Sbjct: 1202 KQQKAHLSISAPFTEACFSNPEKSFIDAAKQGLADNLQGTVDAVAWGQEAPVGTGGSFKL 1261

Query: 787  IYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKAQPGVDNAGGSMRRWNEHNCTTK 608
            +YSGK H PK ++N+YE LL  K D   Q P ADKW  +  V N  GSM+ W+  N T++
Sbjct: 1262 MYSGKAHIPKPSDNVYETLLSLKSDKPWQTPNADKW-WRGAVSNISGSMKTWDGFNFTSE 1320

Query: 607  KEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKK 428
            K+  V  SS+  S+ IGSW +I AM S+L R+LHQY ++H LNE DKSL++EALMYHPKK
Sbjct: 1321 KKTMVRSSSKSDSMPIGSWSSIEAMRSALRRILHQYSIDHHLNEVDKSLVIEALMYHPKK 1380

Query: 427  DAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLLVEK 248
            DA           G  P+HP++RCFILIR+DGTTEDFSY KCV EAA Q+S EF L  + 
Sbjct: 1381 DAKIGCGIKEIKVGCGPYHPETRCFILIRSDGTTEDFSYHKCVNEAARQLSIEFKLTKKS 1440

Query: 247  EL 242
            +L
Sbjct: 1441 DL 1442


>ref|XP_020262150.1| DNA-directed RNA polymerase IV subunit 1 [Asparagus officinalis]
          Length = 1529

 Score =  472 bits (1215), Expect = e-150
 Identities = 231/362 (63%), Positives = 278/362 (76%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRL 1148
            KGF EFKQVDILWDS  KPDG+L +K+ M +SC  R FW  LQ+AC+PIMD+IDW RS  
Sbjct: 1166 KGFTEFKQVDILWDSHSKPDGELIVKVTMAKSCALRNFWHALQNACIPIMDLIDWGRSHP 1225

Query: 1147 DGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGI 968
            DG +DIS+ FGI+S+Y+YFL SLKS +SDIGRNIHLEHLLLVSDSLSVTGEFHGL+AK +
Sbjct: 1226 DGVYDISNAFGIVSAYNYFLRSLKSTISDIGRNIHLEHLLLVSDSLSVTGEFHGLTAKAL 1285

Query: 967  KQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKI 788
            KQQ+AHLSIS+PFT+ACFSNPEK FI+AAK    D+L GTVDAVAWGQEAPVGTGG FK+
Sbjct: 1286 KQQKAHLSISAPFTEACFSNPEKSFIDAAKQGLADNLQGTVDAVAWGQEAPVGTGGSFKL 1345

Query: 787  IYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKAQPGVDNAGGSMRRWNEHNCTTK 608
            +YSGK H PK ++N+YE LL  K D   Q P ADKW  +  V N  GSM+ W+  N T++
Sbjct: 1346 MYSGKAHIPKPSDNVYETLLSLKSDKPWQTPNADKW-WRGAVSNISGSMKTWDGFNFTSE 1404

Query: 607  KEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKK 428
            K+  V  SS+  S+ IGSW +I AM S+L R+LHQY ++H LNE DKSL++EALMYHPKK
Sbjct: 1405 KKTMVRSSSKSDSMPIGSWSSIEAMRSALRRILHQYSIDHHLNEVDKSLVIEALMYHPKK 1464

Query: 427  DAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLLVEK 248
            DA           G  P+HP++RCFILIR+DGTTEDFSY KCV EAA Q+S EF L  + 
Sbjct: 1465 DAKIGCGIKEIKVGCGPYHPETRCFILIRSDGTTEDFSYHKCVNEAARQLSIEFKLTKKS 1524

Query: 247  EL 242
            +L
Sbjct: 1525 DL 1526


>dbj|BAS90582.1| Os04g0572600, partial [Oryza sativa Japonica Group]
          Length = 451

 Score =  319 bits (818), Expect = e-101
 Identities = 169/366 (46%), Positives = 226/366 (61%), Gaps = 1/366 (0%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRL 1148
            KGF EFK V +    Q + D +L LK+ M E C   KFW TLQ+AC+PIM++IDWERSR 
Sbjct: 87   KGFLEFKNVKV----QCQEDNELVLKVGMSEHCKSGKFWATLQNACIPIMELIDWERSRP 142

Query: 1147 DGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGI 968
            +  +D    +GI S++ +F+ SL+S    IGRNIH +HLL+V+D LSV+G+FHGLS++G+
Sbjct: 143  ERVYDNFCSYGIDSAWKFFVESLRSTTDAIGRNIHRQHLLVVADCLSVSGQFHGLSSQGL 202

Query: 967  KQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKI 788
            KQQR  LSISSPF++ACFS P   FI AAK  S D+L GT+DA+AWG+E   G+ GPFKI
Sbjct: 203  KQQRTWLSISSPFSEACFSRPAHSFINAAKRDSVDNLSGTLDAIAWGKEPCAGSSGPFKI 262

Query: 787  IYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKA-QPGVDNAGGSMRRWNEHNCTT 611
            +YSGK H  KQ E+IY+ L    H+   Q    +     +   +         N     T
Sbjct: 263  LYSGKSHETKQNEHIYDFL----HNPEVQALEKNVMDTYRKRTEKTSKRRSALNSEGNAT 318

Query: 610  KKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPK 431
                 + F+ +  + ++G W+NI  M +SL  ML +Y +N  + E DKS LMEAL +HP+
Sbjct: 319  INGGAISFNQKFLNAKVGIWENIIDMRTSLQNMLREYTLNEVVTEQDKSCLMEALKFHPR 378

Query: 430  KDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLLVE 251
                          G +P HP SRCFI++RND TT DFSY KCV+ AAN ISPE G  +E
Sbjct: 379  GYDKIGVGIREIKIGVNPGHPSSRCFIVLRNDDTTADFSYNKCVLGAANSISPELGSYIE 438

Query: 250  KELDSR 233
                +R
Sbjct: 439  NRRSNR 444


>dbj|BAF15523.1| Os04g0572600 [Oryza sativa Japonica Group]
          Length = 449

 Score =  318 bits (815), Expect = e-101
 Identities = 168/366 (45%), Positives = 226/366 (61%), Gaps = 1/366 (0%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRL 1148
            KGF EFK V +    Q + D +L LK+ M E C   KFW TLQ+AC+PIM++IDWERSR 
Sbjct: 85   KGFLEFKNVKV----QCQEDNELVLKVGMSEHCKSGKFWATLQNACIPIMELIDWERSRP 140

Query: 1147 DGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGI 968
            +  +D    +GI S++ +F+ S++S    IGRNIH +HLL+V+D LSV+G+FHGLS++G+
Sbjct: 141  ERVYDNFCSYGIDSAWKFFVESVRSTTDAIGRNIHRQHLLVVADCLSVSGQFHGLSSQGL 200

Query: 967  KQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKI 788
            KQQR  LSISSPF++ACFS P   FI AAK  S D+L GT+DA+AWG+E   G+ GPFKI
Sbjct: 201  KQQRTWLSISSPFSEACFSRPAHSFINAAKRDSVDNLSGTLDAIAWGKEPCAGSSGPFKI 260

Query: 787  IYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKA-QPGVDNAGGSMRRWNEHNCTT 611
            +YSGK H  KQ E+IY+ L    H+   Q    +     +   +         N     T
Sbjct: 261  LYSGKSHETKQNEHIYDFL----HNPEVQALEKNVMDTYRKRTEKTSKRRSALNSEGNAT 316

Query: 610  KKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPK 431
                 + F+ +  + ++G W+NI  M +SL  ML +Y +N  + E DKS LMEAL +HP+
Sbjct: 317  INGGAISFNQKFLNAKVGIWENIIDMRTSLQNMLREYTLNEVVTEQDKSCLMEALKFHPR 376

Query: 430  KDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLLVE 251
                          G +P HP SRCFI++RND TT DFSY KCV+ AAN ISPE G  +E
Sbjct: 377  GYDKIGVGIREIKIGVNPGHPSSRCFIVLRNDDTTADFSYNKCVLGAANSISPELGSYIE 436

Query: 250  KELDSR 233
                +R
Sbjct: 437  NRRSNR 442


>ref|XP_020572389.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Phalaenopsis
            equestris]
          Length = 1418

 Score =  332 bits (851), Expect = 1e-98
 Identities = 177/371 (47%), Positives = 241/371 (64%), Gaps = 6/371 (1%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWD-SQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSR 1151
            KGF EF++VDILWD +Q   +G+LFLK+ M E+C P KFW ++Q+AC+PIMD+IDW RS 
Sbjct: 1051 KGFSEFEKVDILWDDTQKNSNGELFLKVTMSETCSPGKFWNSIQNACVPIMDLIDWNRSH 1110

Query: 1150 LDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKG 971
             +   +IS +FGI +++  FL SLKS   D+GRN+  EHL +V+D L  +GEF+GLS KG
Sbjct: 1111 PNDICNISSMFGISAAWIIFLRSLKSTALDVGRNVRQEHLKIVADRLFFSGEFYGLSKKG 1170

Query: 970  IKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFK 791
            +K Q+   + SSPFT ACFSNP  CF++AAK   TD L+GT+DA++WG+E+P+GTGGPFK
Sbjct: 1171 LKMQKDFTANSSPFTFACFSNPASCFVDAAKQDCTDSLHGTIDAISWGKESPIGTGGPFK 1230

Query: 790  IIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKAQPGVDNAGGSM---RRWNEHN 620
            I+YSGKV +PK+   IY +L  Q           DK   +P   +AG  +   ++W+E N
Sbjct: 1231 IMYSGKVSNPKEGVGIYSMLQCQDI--------IDKRMEEP--LHAGDDICKSKKWDE-N 1279

Query: 619  CTTKKEKNVVFSSQP--ASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEAL 446
            C T+ E +  F+ Q    + + GS+ +I  M  SL  +L +YP+N  +  AD+ +LM+AL
Sbjct: 1280 CCTEYEGHTDFAFQKGLGARQNGSYSHIVNMEFSLRAILLKYPINRYVTAADREILMKAL 1339

Query: 445  MYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEF 266
              HP  DA           G+S  H  S+CFIL+R DGTTEDFSY KCV  AA QISPE 
Sbjct: 1340 ARHPSCDAKIGSGVQDIMVGYSSEHKGSKCFILVRKDGTTEDFSYHKCVAGAAAQISPEC 1399

Query: 265  GLLVEKELDSR 233
              + EK    R
Sbjct: 1400 AAMFEKRYHRR 1410


>ref|XP_020572386.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Phalaenopsis
            equestris]
 ref|XP_020572387.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Phalaenopsis
            equestris]
 ref|XP_020572388.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Phalaenopsis
            equestris]
          Length = 1503

 Score =  332 bits (851), Expect = 2e-98
 Identities = 177/371 (47%), Positives = 241/371 (64%), Gaps = 6/371 (1%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWD-SQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSR 1151
            KGF EF++VDILWD +Q   +G+LFLK+ M E+C P KFW ++Q+AC+PIMD+IDW RS 
Sbjct: 1136 KGFSEFEKVDILWDDTQKNSNGELFLKVTMSETCSPGKFWNSIQNACVPIMDLIDWNRSH 1195

Query: 1150 LDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKG 971
             +   +IS +FGI +++  FL SLKS   D+GRN+  EHL +V+D L  +GEF+GLS KG
Sbjct: 1196 PNDICNISSMFGISAAWIIFLRSLKSTALDVGRNVRQEHLKIVADRLFFSGEFYGLSKKG 1255

Query: 970  IKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFK 791
            +K Q+   + SSPFT ACFSNP  CF++AAK   TD L+GT+DA++WG+E+P+GTGGPFK
Sbjct: 1256 LKMQKDFTANSSPFTFACFSNPASCFVDAAKQDCTDSLHGTIDAISWGKESPIGTGGPFK 1315

Query: 790  IIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKAQPGVDNAGGSM---RRWNEHN 620
            I+YSGKV +PK+   IY +L  Q           DK   +P   +AG  +   ++W+E N
Sbjct: 1316 IMYSGKVSNPKEGVGIYSMLQCQDI--------IDKRMEEP--LHAGDDICKSKKWDE-N 1364

Query: 619  CTTKKEKNVVFSSQP--ASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEAL 446
            C T+ E +  F+ Q    + + GS+ +I  M  SL  +L +YP+N  +  AD+ +LM+AL
Sbjct: 1365 CCTEYEGHTDFAFQKGLGARQNGSYSHIVNMEFSLRAILLKYPINRYVTAADREILMKAL 1424

Query: 445  MYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEF 266
              HP  DA           G+S  H  S+CFIL+R DGTTEDFSY KCV  AA QISPE 
Sbjct: 1425 ARHPSCDAKIGSGVQDIMVGYSSEHKGSKCFILVRKDGTTEDFSYHKCVAGAAAQISPEC 1484

Query: 265  GLLVEKELDSR 233
              + EK    R
Sbjct: 1485 AAMFEKRYHRR 1495


>ref|XP_020681066.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Dendrobium
            catenatum]
          Length = 1438

 Score =  328 bits (840), Expect = 5e-97
 Identities = 176/371 (47%), Positives = 239/371 (64%), Gaps = 6/371 (1%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWD-SQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSR 1151
            KGF E ++VDILWD +Q   +G+LFLK+ M E+C   KFW ++Q+ACLPIMD+IDW RS 
Sbjct: 1071 KGFSEIRKVDILWDDAQKNSNGELFLKVTMSENCSLGKFWSSIQNACLPIMDLIDWNRSH 1130

Query: 1150 LDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKG 971
             +   +IS +FGI +S+ +FL SLKS   D+GR++  EHL +V+D L ++GEFHGL+ KG
Sbjct: 1131 PNDICNISSMFGISASWLFFLRSLKSTALDVGRSVRQEHLNIVADRLFISGEFHGLNKKG 1190

Query: 970  IKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFK 791
            +K QR + + SSPFT ACFSNP  CFI+AAK    D L GT+ A++WG+E+P GTGGPFK
Sbjct: 1191 LKVQRDYTTTSSPFTFACFSNPASCFIDAAKQDYEDSLRGTIGAISWGKESPTGTGGPFK 1250

Query: 790  IIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKAQPGVDNAGG---SMRRWNEHN 620
            IIYSGKV +PK+ E+IY +L  Q           D  + + G     G   S + W++ N
Sbjct: 1251 IIYSGKVCNPKEGESIYSMLQCQ-----------DIIRKKMGKPLHVGDICSSKNWDQ-N 1298

Query: 619  CTTKKEKNVVFSSQPASV--RIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEAL 446
            C T+ E +  F+ Q   +  R GS+ +I  M S+L  +L +YP+N  +  AD+ +LM+AL
Sbjct: 1299 CCTQYEGHTDFAFQRKFLAHRNGSYTHIINMESTLRAILLKYPINRYVTAADREILMKAL 1358

Query: 445  MYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEF 266
              HP  DA           G+S  H  S+CFIL+R DGTTEDFSY KCV  AA Q+SPE 
Sbjct: 1359 ARHPSSDAKIGTGVQDIKVGYSSEHKGSKCFILVRKDGTTEDFSYHKCVAGAAAQVSPEC 1418

Query: 265  GLLVEKELDSR 233
              + EK+   R
Sbjct: 1419 AAIFEKKHQRR 1429


>ref|XP_020681065.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Dendrobium
            catenatum]
          Length = 1499

 Score =  328 bits (840), Expect = 7e-97
 Identities = 176/371 (47%), Positives = 239/371 (64%), Gaps = 6/371 (1%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWD-SQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSR 1151
            KGF E ++VDILWD +Q   +G+LFLK+ M E+C   KFW ++Q+ACLPIMD+IDW RS 
Sbjct: 1132 KGFSEIRKVDILWDDAQKNSNGELFLKVTMSENCSLGKFWSSIQNACLPIMDLIDWNRSH 1191

Query: 1150 LDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKG 971
             +   +IS +FGI +S+ +FL SLKS   D+GR++  EHL +V+D L ++GEFHGL+ KG
Sbjct: 1192 PNDICNISSMFGISASWLFFLRSLKSTALDVGRSVRQEHLNIVADRLFISGEFHGLNKKG 1251

Query: 970  IKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFK 791
            +K QR + + SSPFT ACFSNP  CFI+AAK    D L GT+ A++WG+E+P GTGGPFK
Sbjct: 1252 LKVQRDYTTTSSPFTFACFSNPASCFIDAAKQDYEDSLRGTIGAISWGKESPTGTGGPFK 1311

Query: 790  IIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKAQPGVDNAGG---SMRRWNEHN 620
            IIYSGKV +PK+ E+IY +L  Q           D  + + G     G   S + W++ N
Sbjct: 1312 IIYSGKVCNPKEGESIYSMLQCQ-----------DIIRKKMGKPLHVGDICSSKNWDQ-N 1359

Query: 619  CTTKKEKNVVFSSQPASV--RIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEAL 446
            C T+ E +  F+ Q   +  R GS+ +I  M S+L  +L +YP+N  +  AD+ +LM+AL
Sbjct: 1360 CCTQYEGHTDFAFQRKFLAHRNGSYTHIINMESTLRAILLKYPINRYVTAADREILMKAL 1419

Query: 445  MYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEF 266
              HP  DA           G+S  H  S+CFIL+R DGTTEDFSY KCV  AA Q+SPE 
Sbjct: 1420 ARHPSSDAKIGTGVQDIKVGYSSEHKGSKCFILVRKDGTTEDFSYHKCVAGAAAQVSPEC 1479

Query: 265  GLLVEKELDSR 233
              + EK+   R
Sbjct: 1480 AAIFEKKHQRR 1490


>ref|XP_020084502.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Ananas comosus]
          Length = 1240

 Score =  325 bits (832), Expect = 1e-96
 Identities = 183/379 (48%), Positives = 234/379 (61%), Gaps = 17/379 (4%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDG-QLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSR 1151
            KGF   K V+I    Q +PD  +L LK+ M ESC   +FW TLQ AC+PIMD+IDW  S 
Sbjct: 862  KGFLGIKHVEI----QCQPDSTELSLKVTMSESCSRGRFWSTLQDACIPIMDLIDWNSSH 917

Query: 1150 LDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKG 971
             +  +D   V+GI +++ YFL SLKSA S IGR+IH E L+ V+D  SVTGEFHGLS KG
Sbjct: 918  PESIYDTFTVYGIDAAWKYFLKSLKSATSGIGRHIHQEQLVTVADCFSVTGEFHGLSTKG 977

Query: 970  IKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFK 791
            +KQQR  LSISSPF+ ACFS+P   FI AAK  S D L G +DAV+WG+E PVGTGGPF+
Sbjct: 978  LKQQRNRLSISSPFSHACFSSPGNNFINAAKKGSVDELCGILDAVSWGKEPPVGTGGPFE 1037

Query: 790  IIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGA---------DKWKAQ-PGVDNA-GGS 644
            II+S KV   +++E+IY++L   K +                  KW+   P   N   G 
Sbjct: 1038 IIFSQKVPQLQKSESIYKVLHNLKVEEPKPESAVACRASNRSNSKWRLNIPTFANGHAGK 1097

Query: 643  MRRW--NEHNCTTKKE---KNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLN 479
              +W  N +   T+ E   K +   S+    ++GSW +I  M +SL  MLH+YP +  + 
Sbjct: 1098 KDKWKCNFNKGATQTEGRPKKLAVQSEFLMRKVGSWASIVDMCTSLRAMLHEYPYDGIVG 1157

Query: 478  EADKSLLMEALMYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCV 299
            E DKS LMEAL YHPK+D            GH P H  SRCFIL+R DGT +DFSYRKCV
Sbjct: 1158 EKDKSSLMEALKYHPKRDEKIGVGVQDIKIGHHPTHRCSRCFILVRKDGTMDDFSYRKCV 1217

Query: 298  IEAANQISPEFGLLVEKEL 242
            + AA  +S EFG +VEK+L
Sbjct: 1218 VGAAKMLSTEFGSIVEKKL 1236


>ref|XP_020084500.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Ananas comosus]
 ref|XP_020084501.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Ananas comosus]
          Length = 1545

 Score =  325 bits (832), Expect = 1e-95
 Identities = 183/379 (48%), Positives = 234/379 (61%), Gaps = 17/379 (4%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDG-QLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSR 1151
            KGF   K V+I    Q +PD  +L LK+ M ESC   +FW TLQ AC+PIMD+IDW  S 
Sbjct: 1167 KGFLGIKHVEI----QCQPDSTELSLKVTMSESCSRGRFWSTLQDACIPIMDLIDWNSSH 1222

Query: 1150 LDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKG 971
             +  +D   V+GI +++ YFL SLKSA S IGR+IH E L+ V+D  SVTGEFHGLS KG
Sbjct: 1223 PESIYDTFTVYGIDAAWKYFLKSLKSATSGIGRHIHQEQLVTVADCFSVTGEFHGLSTKG 1282

Query: 970  IKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFK 791
            +KQQR  LSISSPF+ ACFS+P   FI AAK  S D L G +DAV+WG+E PVGTGGPF+
Sbjct: 1283 LKQQRNRLSISSPFSHACFSSPGNNFINAAKKGSVDELCGILDAVSWGKEPPVGTGGPFE 1342

Query: 790  IIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGA---------DKWKAQ-PGVDNA-GGS 644
            II+S KV   +++E+IY++L   K +                  KW+   P   N   G 
Sbjct: 1343 IIFSQKVPQLQKSESIYKVLHNLKVEEPKPESAVACRASNRSNSKWRLNIPTFANGHAGK 1402

Query: 643  MRRW--NEHNCTTKKE---KNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLN 479
              +W  N +   T+ E   K +   S+    ++GSW +I  M +SL  MLH+YP +  + 
Sbjct: 1403 KDKWKCNFNKGATQTEGRPKKLAVQSEFLMRKVGSWASIVDMCTSLRAMLHEYPYDGIVG 1462

Query: 478  EADKSLLMEALMYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCV 299
            E DKS LMEAL YHPK+D            GH P H  SRCFIL+R DGT +DFSYRKCV
Sbjct: 1463 EKDKSSLMEALKYHPKRDEKIGVGVQDIKIGHHPTHRCSRCFILVRKDGTMDDFSYRKCV 1522

Query: 298  IEAANQISPEFGLLVEKEL 242
            + AA  +S EFG +VEK+L
Sbjct: 1523 VGAAKMLSTEFGSIVEKKL 1541


>gb|OAY84267.1| DNA-directed RNA polymerase IV subunit 1 [Ananas comosus]
          Length = 1556

 Score =  325 bits (832), Expect = 1e-95
 Identities = 183/379 (48%), Positives = 234/379 (61%), Gaps = 17/379 (4%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDG-QLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSR 1151
            KGF   K V+I    Q +PD  +L LK+ M ESC   +FW TLQ AC+PIMD+IDW  S 
Sbjct: 1178 KGFLGIKHVEI----QCQPDSTELSLKVTMSESCSRGRFWSTLQDACIPIMDLIDWNSSH 1233

Query: 1150 LDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKG 971
             +  +D   V+GI +++ YFL SLKSA S IGR+IH E L+ V+D  SVTGEFHGLS KG
Sbjct: 1234 PESIYDTFTVYGIDAAWKYFLKSLKSATSGIGRHIHQEQLVTVADCFSVTGEFHGLSTKG 1293

Query: 970  IKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFK 791
            +KQQR  LSISSPF+ ACFS+P   FI AAK  S D L G +DAV+WG+E PVGTGGPF+
Sbjct: 1294 LKQQRNRLSISSPFSHACFSSPGNNFINAAKKGSVDELCGILDAVSWGKEPPVGTGGPFE 1353

Query: 790  IIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGA---------DKWKAQ-PGVDNA-GGS 644
            II+S KV   +++E+IY++L   K +                  KW+   P   N   G 
Sbjct: 1354 IIFSQKVPQLQKSESIYKVLHNLKVEEPKPESAVACRASNRSNSKWRLNIPTFANGHAGK 1413

Query: 643  MRRW--NEHNCTTKKE---KNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLN 479
              +W  N +   T+ E   K +   S+    ++GSW +I  M +SL  MLH+YP +  + 
Sbjct: 1414 KDKWKCNFNKGATQTEGRPKKLAVQSEFLMRKVGSWASIVDMCTSLRAMLHEYPYDGIVG 1473

Query: 478  EADKSLLMEALMYHPKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCV 299
            E DKS LMEAL YHPK+D            GH P H  SRCFIL+R DGT +DFSYRKCV
Sbjct: 1474 EKDKSSLMEALKYHPKRDEKIGVGVQDIKIGHHPTHRCSRCFILVRKDGTMDDFSYRKCV 1533

Query: 298  IEAANQISPEFGLLVEKEL 242
            + AA  +S EFG +VEK+L
Sbjct: 1534 VGAAKMLSTEFGSIVEKKL 1552


>ref|XP_020165521.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Aegilops
            tauschii subsp. tauschii]
 ref|XP_020165522.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Aegilops
            tauschii subsp. tauschii]
 ref|XP_020165523.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Aegilops
            tauschii subsp. tauschii]
          Length = 1425

 Score =  323 bits (828), Expect = 2e-95
 Identities = 178/366 (48%), Positives = 236/366 (64%), Gaps = 1/366 (0%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDGQLFLKIIM-EESCPPRKFWRTLQSACLPIMDMIDWERSR 1151
            KGF EFK+V+I    Q + D +L +K++M EE C   KFW TLQ +C+ IM++IDWERSR
Sbjct: 1087 KGFLEFKKVEI----QCQEDSELVVKVVMSEEHCKSVKFWATLQKSCIAIMELIDWERSR 1142

Query: 1150 LDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKG 971
                +DI   +GI S++ YF+ SL+S   DIGRNI  EHLL+V++ LSV+G+FHGLS++G
Sbjct: 1143 PGSVYDIFCSYGIDSAWKYFVESLRSKTDDIGRNIRREHLLVVANCLSVSGQFHGLSSQG 1202

Query: 970  IKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFK 791
            +KQQR  LSISSPF++ACFS P   FI AAK SS D+L GTVDA+AWG+E   GT GPFK
Sbjct: 1203 LKQQRTRLSISSPFSEACFSRPAHTFINAAKQSSVDNLCGTVDAMAWGKEPSTGTSGPFK 1262

Query: 790  IIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKAQPGVDNAGGSMRRWNEHNCTT 611
            IIYSGK H+P   ENIY+ L      +S ++     W+A PG     GS         T 
Sbjct: 1263 IIYSGKAHAPIPNENIYDFL------NSPEV-----WQA-PGEAFLNGS---------TI 1301

Query: 610  KKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPK 431
              E++ + ++      +G WDNI  M + L  ML +Y +N  + E DKS ++EAL +HP+
Sbjct: 1302 SVEQDFLVAT------VGIWDNIIDMRTCLQNMLREYQLNECVVELDKSRVIEALRFHPR 1355

Query: 430  KDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLLVE 251
                          GH P HP +RCFI++R+DGTTEDFSY+KCV  AA+ ISPE G  VE
Sbjct: 1356 GREKIGAGIKDIKIGHHPSHPGTRCFIMVRDDGTTEDFSYKKCVQAAADSISPELGRYVE 1415

Query: 250  KELDSR 233
            + L +R
Sbjct: 1416 RILRNR 1421


>ref|XP_020165520.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Aegilops
            tauschii subsp. tauschii]
          Length = 1431

 Score =  323 bits (828), Expect = 2e-95
 Identities = 178/366 (48%), Positives = 236/366 (64%), Gaps = 1/366 (0%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDGQLFLKIIM-EESCPPRKFWRTLQSACLPIMDMIDWERSR 1151
            KGF EFK+V+I    Q + D +L +K++M EE C   KFW TLQ +C+ IM++IDWERSR
Sbjct: 1093 KGFLEFKKVEI----QCQEDSELVVKVVMSEEHCKSVKFWATLQKSCIAIMELIDWERSR 1148

Query: 1150 LDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKG 971
                +DI   +GI S++ YF+ SL+S   DIGRNI  EHLL+V++ LSV+G+FHGLS++G
Sbjct: 1149 PGSVYDIFCSYGIDSAWKYFVESLRSKTDDIGRNIRREHLLVVANCLSVSGQFHGLSSQG 1208

Query: 970  IKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFK 791
            +KQQR  LSISSPF++ACFS P   FI AAK SS D+L GTVDA+AWG+E   GT GPFK
Sbjct: 1209 LKQQRTRLSISSPFSEACFSRPAHTFINAAKQSSVDNLCGTVDAMAWGKEPSTGTSGPFK 1268

Query: 790  IIYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKAQPGVDNAGGSMRRWNEHNCTT 611
            IIYSGK H+P   ENIY+ L      +S ++     W+A PG     GS         T 
Sbjct: 1269 IIYSGKAHAPIPNENIYDFL------NSPEV-----WQA-PGEAFLNGS---------TI 1307

Query: 610  KKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPK 431
              E++ + ++      +G WDNI  M + L  ML +Y +N  + E DKS ++EAL +HP+
Sbjct: 1308 SVEQDFLVAT------VGIWDNIIDMRTCLQNMLREYQLNECVVELDKSRVIEALRFHPR 1361

Query: 430  KDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLLVE 251
                          GH P HP +RCFI++R+DGTTEDFSY+KCV  AA+ ISPE G  VE
Sbjct: 1362 GREKIGAGIKDIKIGHHPSHPGTRCFIMVRDDGTTEDFSYKKCVQAAADSISPELGRYVE 1421

Query: 250  KELDSR 233
            + L +R
Sbjct: 1422 RILRNR 1427


>ref|XP_004970758.1| DNA-directed RNA polymerase IV subunit 1 isoform X5 [Setaria italica]
          Length = 1181

 Score =  318 bits (816), Expect = 1e-94
 Identities = 169/368 (45%), Positives = 231/368 (62%), Gaps = 3/368 (0%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRL 1148
            KGF EFK V+I    Q + DG+L +K+ M E C   +FW TLQ+AC+P+M++IDWE+S+ 
Sbjct: 823  KGFLEFKDVEI----QCRHDGELLVKVGMSEHCKAGRFWATLQNACIPVMELIDWEQSQP 878

Query: 1147 DGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGI 968
               +DI   +GI S++  F+ SLKS  SDIGRN+  EHLL+V+DSLSVTG+F  LS++G+
Sbjct: 879  KNVYDIFCSYGIDSAWKCFVESLKSVTSDIGRNVRREHLLIVADSLSVTGQFQALSSQGL 938

Query: 967  KQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKI 788
             QQR+ LSISSPF++ACFS P + FI AAKH S D+L G++DA+AWG+E   GT GPF+I
Sbjct: 939  NQQRSRLSISSPFSEACFSRPARSFINAAKHCSVDNLCGSLDAIAWGKEPFNGTSGPFEI 998

Query: 787  IYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADK---WKAQPGVDNAGGSMRRWNEHNC 617
            +++GK H P+Q E+IY+ L       S ++   +K      +   +NA          + 
Sbjct: 999  MHAGKPHEPEQNESIYDFL------RSPEVRNFEKDHMDTCRQSTENALRCRLACKSKDS 1052

Query: 616  TTKKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYH 437
             T +   +         ++G WDNI  M +SL  ML +YP+N  + E DKS L+EAL +H
Sbjct: 1053 ATVQGGAMTIDQGFLHAKVGIWDNIIDMRTSLQNMLREYPLNGFVKETDKSQLVEALKFH 1112

Query: 436  PKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLL 257
            P               G +P HP +RCFIL+R DGTTEDFSY KCV  AAN ISP+ G  
Sbjct: 1113 PNGAQKIGVGVREIKIGLNPSHPGTRCFILLRKDGTTEDFSYNKCVQGAANSISPQLGSY 1172

Query: 256  VEKELDSR 233
             EK+L  R
Sbjct: 1173 FEKKLHRR 1180


>ref|XP_015637043.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X6 [Oryza
            sativa Japonica Group]
          Length = 1251

 Score =  319 bits (818), Expect = 1e-94
 Identities = 169/366 (46%), Positives = 226/366 (61%), Gaps = 1/366 (0%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRL 1148
            KGF EFK V +    Q + D +L LK+ M E C   KFW TLQ+AC+PIM++IDWERSR 
Sbjct: 887  KGFLEFKNVKV----QCQEDNELVLKVGMSEHCKSGKFWATLQNACIPIMELIDWERSRP 942

Query: 1147 DGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGI 968
            +  +D    +GI S++ +F+ SL+S    IGRNIH +HLL+V+D LSV+G+FHGLS++G+
Sbjct: 943  ERVYDNFCSYGIDSAWKFFVESLRSTTDAIGRNIHRQHLLVVADCLSVSGQFHGLSSQGL 1002

Query: 967  KQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKI 788
            KQQR  LSISSPF++ACFS P   FI AAK  S D+L GT+DA+AWG+E   G+ GPFKI
Sbjct: 1003 KQQRTWLSISSPFSEACFSRPAHSFINAAKRDSVDNLSGTLDAIAWGKEPCAGSSGPFKI 1062

Query: 787  IYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKA-QPGVDNAGGSMRRWNEHNCTT 611
            +YSGK H  KQ E+IY+ L    H+   Q    +     +   +         N     T
Sbjct: 1063 LYSGKSHETKQNEHIYDFL----HNPEVQALEKNVMDTYRKRTEKTSKRRSALNSEGNAT 1118

Query: 610  KKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPK 431
                 + F+ +  + ++G W+NI  M +SL  ML +Y +N  + E DKS LMEAL +HP+
Sbjct: 1119 INGGAISFNQKFLNAKVGIWENIIDMRTSLQNMLREYTLNEVVTEQDKSCLMEALKFHPR 1178

Query: 430  KDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLLVE 251
                          G +P HP SRCFI++RND TT DFSY KCV+ AAN ISPE G  +E
Sbjct: 1179 GYDKIGVGIREIKIGVNPGHPSSRCFIVLRNDDTTADFSYNKCVLGAANSISPELGSYIE 1238

Query: 250  KELDSR 233
                +R
Sbjct: 1239 NRRSNR 1244


>gb|KQL07953.1| hypothetical protein SETIT_0000652mg, partial [Setaria italica]
          Length = 1278

 Score =  318 bits (816), Expect = 3e-94
 Identities = 169/368 (45%), Positives = 231/368 (62%), Gaps = 3/368 (0%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRL 1148
            KGF EFK V+I    Q + DG+L +K+ M E C   +FW TLQ+AC+P+M++IDWE+S+ 
Sbjct: 920  KGFLEFKDVEI----QCRHDGELLVKVGMSEHCKAGRFWATLQNACIPVMELIDWEQSQP 975

Query: 1147 DGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGI 968
               +DI   +GI S++  F+ SLKS  SDIGRN+  EHLL+V+DSLSVTG+F  LS++G+
Sbjct: 976  KNVYDIFCSYGIDSAWKCFVESLKSVTSDIGRNVRREHLLIVADSLSVTGQFQALSSQGL 1035

Query: 967  KQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKI 788
             QQR+ LSISSPF++ACFS P + FI AAKH S D+L G++DA+AWG+E   GT GPF+I
Sbjct: 1036 NQQRSRLSISSPFSEACFSRPARSFINAAKHCSVDNLCGSLDAIAWGKEPFNGTSGPFEI 1095

Query: 787  IYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADK---WKAQPGVDNAGGSMRRWNEHNC 617
            +++GK H P+Q E+IY+ L       S ++   +K      +   +NA          + 
Sbjct: 1096 MHAGKPHEPEQNESIYDFL------RSPEVRNFEKDHMDTCRQSTENALRCRLACKSKDS 1149

Query: 616  TTKKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYH 437
             T +   +         ++G WDNI  M +SL  ML +YP+N  + E DKS L+EAL +H
Sbjct: 1150 ATVQGGAMTIDQGFLHAKVGIWDNIIDMRTSLQNMLREYPLNGFVKETDKSQLVEALKFH 1209

Query: 436  PKKDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLL 257
            P               G +P HP +RCFIL+R DGTTEDFSY KCV  AAN ISP+ G  
Sbjct: 1210 PNGAQKIGVGVREIKIGLNPSHPGTRCFILLRKDGTTEDFSYNKCVQGAANSISPQLGSY 1269

Query: 256  VEKELDSR 233
             EK+L  R
Sbjct: 1270 FEKKLHRR 1277


>ref|XP_015637042.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X5 [Oryza
            sativa Japonica Group]
          Length = 1465

 Score =  319 bits (818), Expect = 6e-94
 Identities = 169/366 (46%), Positives = 226/366 (61%), Gaps = 1/366 (0%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRL 1148
            KGF EFK V +    Q + D +L LK+ M E C   KFW TLQ+AC+PIM++IDWERSR 
Sbjct: 1101 KGFLEFKNVKV----QCQEDNELVLKVGMSEHCKSGKFWATLQNACIPIMELIDWERSRP 1156

Query: 1147 DGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGI 968
            +  +D    +GI S++ +F+ SL+S    IGRNIH +HLL+V+D LSV+G+FHGLS++G+
Sbjct: 1157 ERVYDNFCSYGIDSAWKFFVESLRSTTDAIGRNIHRQHLLVVADCLSVSGQFHGLSSQGL 1216

Query: 967  KQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKI 788
            KQQR  LSISSPF++ACFS P   FI AAK  S D+L GT+DA+AWG+E   G+ GPFKI
Sbjct: 1217 KQQRTWLSISSPFSEACFSRPAHSFINAAKRDSVDNLSGTLDAIAWGKEPCAGSSGPFKI 1276

Query: 787  IYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKA-QPGVDNAGGSMRRWNEHNCTT 611
            +YSGK H  KQ E+IY+ L    H+   Q    +     +   +         N     T
Sbjct: 1277 LYSGKSHETKQNEHIYDFL----HNPEVQALEKNVMDTYRKRTEKTSKRRSALNSEGNAT 1332

Query: 610  KKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPK 431
                 + F+ +  + ++G W+NI  M +SL  ML +Y +N  + E DKS LMEAL +HP+
Sbjct: 1333 INGGAISFNQKFLNAKVGIWENIIDMRTSLQNMLREYTLNEVVTEQDKSCLMEALKFHPR 1392

Query: 430  KDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLLVE 251
                          G +P HP SRCFI++RND TT DFSY KCV+ AAN ISPE G  +E
Sbjct: 1393 GYDKIGVGIREIKIGVNPGHPSSRCFIVLRNDDTTADFSYNKCVLGAANSISPELGSYIE 1452

Query: 250  KELDSR 233
                +R
Sbjct: 1453 NRRSNR 1458


>ref|XP_015637041.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X4 [Oryza
            sativa Japonica Group]
          Length = 1466

 Score =  319 bits (818), Expect = 6e-94
 Identities = 169/366 (46%), Positives = 226/366 (61%), Gaps = 1/366 (0%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRL 1148
            KGF EFK V +    Q + D +L LK+ M E C   KFW TLQ+AC+PIM++IDWERSR 
Sbjct: 1102 KGFLEFKNVKV----QCQEDNELVLKVGMSEHCKSGKFWATLQNACIPIMELIDWERSRP 1157

Query: 1147 DGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGI 968
            +  +D    +GI S++ +F+ SL+S    IGRNIH +HLL+V+D LSV+G+FHGLS++G+
Sbjct: 1158 ERVYDNFCSYGIDSAWKFFVESLRSTTDAIGRNIHRQHLLVVADCLSVSGQFHGLSSQGL 1217

Query: 967  KQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKI 788
            KQQR  LSISSPF++ACFS P   FI AAK  S D+L GT+DA+AWG+E   G+ GPFKI
Sbjct: 1218 KQQRTWLSISSPFSEACFSRPAHSFINAAKRDSVDNLSGTLDAIAWGKEPCAGSSGPFKI 1277

Query: 787  IYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKA-QPGVDNAGGSMRRWNEHNCTT 611
            +YSGK H  KQ E+IY+ L    H+   Q    +     +   +         N     T
Sbjct: 1278 LYSGKSHETKQNEHIYDFL----HNPEVQALEKNVMDTYRKRTEKTSKRRSALNSEGNAT 1333

Query: 610  KKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPK 431
                 + F+ +  + ++G W+NI  M +SL  ML +Y +N  + E DKS LMEAL +HP+
Sbjct: 1334 INGGAISFNQKFLNAKVGIWENIIDMRTSLQNMLREYTLNEVVTEQDKSCLMEALKFHPR 1393

Query: 430  KDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLLVE 251
                          G +P HP SRCFI++RND TT DFSY KCV+ AAN ISPE G  +E
Sbjct: 1394 GYDKIGVGIREIKIGVNPGHPSSRCFIVLRNDDTTADFSYNKCVLGAANSISPELGSYIE 1453

Query: 250  KELDSR 233
                +R
Sbjct: 1454 NRRSNR 1459


>ref|XP_015637040.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Oryza
            sativa Japonica Group]
          Length = 1466

 Score =  319 bits (818), Expect = 6e-94
 Identities = 169/366 (46%), Positives = 226/366 (61%), Gaps = 1/366 (0%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRL 1148
            KGF EFK V +    Q + D +L LK+ M E C   KFW TLQ+AC+PIM++IDWERSR 
Sbjct: 1102 KGFLEFKNVKV----QCQEDNELVLKVGMSEHCKSGKFWATLQNACIPIMELIDWERSRP 1157

Query: 1147 DGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGI 968
            +  +D    +GI S++ +F+ SL+S    IGRNIH +HLL+V+D LSV+G+FHGLS++G+
Sbjct: 1158 ERVYDNFCSYGIDSAWKFFVESLRSTTDAIGRNIHRQHLLVVADCLSVSGQFHGLSSQGL 1217

Query: 967  KQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKI 788
            KQQR  LSISSPF++ACFS P   FI AAK  S D+L GT+DA+AWG+E   G+ GPFKI
Sbjct: 1218 KQQRTWLSISSPFSEACFSRPAHSFINAAKRDSVDNLSGTLDAIAWGKEPCAGSSGPFKI 1277

Query: 787  IYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKA-QPGVDNAGGSMRRWNEHNCTT 611
            +YSGK H  KQ E+IY+ L    H+   Q    +     +   +         N     T
Sbjct: 1278 LYSGKSHETKQNEHIYDFL----HNPEVQALEKNVMDTYRKRTEKTSKRRSALNSEGNAT 1333

Query: 610  KKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPK 431
                 + F+ +  + ++G W+NI  M +SL  ML +Y +N  + E DKS LMEAL +HP+
Sbjct: 1334 INGGAISFNQKFLNAKVGIWENIIDMRTSLQNMLREYTLNEVVTEQDKSCLMEALKFHPR 1393

Query: 430  KDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLLVE 251
                          G +P HP SRCFI++RND TT DFSY KCV+ AAN ISPE G  +E
Sbjct: 1394 GYDKIGVGIREIKIGVNPGHPSSRCFIVLRNDDTTADFSYNKCVLGAANSISPELGSYIE 1453

Query: 250  KELDSR 233
                +R
Sbjct: 1454 NRRSNR 1459


>ref|XP_015637039.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Oryza
            sativa Japonica Group]
          Length = 1467

 Score =  319 bits (818), Expect = 6e-94
 Identities = 169/366 (46%), Positives = 226/366 (61%), Gaps = 1/366 (0%)
 Frame = -1

Query: 1327 KGFKEFKQVDILWDSQPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRL 1148
            KGF EFK V +    Q + D +L LK+ M E C   KFW TLQ+AC+PIM++IDWERSR 
Sbjct: 1103 KGFLEFKNVKV----QCQEDNELVLKVGMSEHCKSGKFWATLQNACIPIMELIDWERSRP 1158

Query: 1147 DGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGI 968
            +  +D    +GI S++ +F+ SL+S    IGRNIH +HLL+V+D LSV+G+FHGLS++G+
Sbjct: 1159 ERVYDNFCSYGIDSAWKFFVESLRSTTDAIGRNIHRQHLLVVADCLSVSGQFHGLSSQGL 1218

Query: 967  KQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKI 788
            KQQR  LSISSPF++ACFS P   FI AAK  S D+L GT+DA+AWG+E   G+ GPFKI
Sbjct: 1219 KQQRTWLSISSPFSEACFSRPAHSFINAAKRDSVDNLSGTLDAIAWGKEPCAGSSGPFKI 1278

Query: 787  IYSGKVHSPKQTENIYEILLKQKHDSSSQIPGADKWKA-QPGVDNAGGSMRRWNEHNCTT 611
            +YSGK H  KQ E+IY+ L    H+   Q    +     +   +         N     T
Sbjct: 1279 LYSGKSHETKQNEHIYDFL----HNPEVQALEKNVMDTYRKRTEKTSKRRSALNSEGNAT 1334

Query: 610  KKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPK 431
                 + F+ +  + ++G W+NI  M +SL  ML +Y +N  + E DKS LMEAL +HP+
Sbjct: 1335 INGGAISFNQKFLNAKVGIWENIIDMRTSLQNMLREYTLNEVVTEQDKSCLMEALKFHPR 1394

Query: 430  KDAXXXXXXXXXXXGHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLLVE 251
                          G +P HP SRCFI++RND TT DFSY KCV+ AAN ISPE G  +E
Sbjct: 1395 GYDKIGVGIREIKIGVNPGHPSSRCFIVLRNDDTTADFSYNKCVLGAANSISPELGSYIE 1454

Query: 250  KELDSR 233
                +R
Sbjct: 1455 NRRSNR 1460