BLASTX nr result
ID: Ophiopogon23_contig00015890
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00015890
(465 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK64083.1| uncharacterized protein A4U43_C07F21910 [Asparagu... 137 1e-38
gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium bar... 114 2e-26
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 108 2e-24
ref|WP_105280125.1| hypothetical protein [Escherichia coli] >gi|... 104 5e-24
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 104 4e-23
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 102 2e-22
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 102 4e-22
ref|XP_020245105.1| uncharacterized protein LOC109823228 [Aspara... 91 5e-20
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 95 1e-19
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 93 5e-19
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 93 5e-19
ref|XP_020272572.1| glycine-rich RNA-binding protein 3, mitochon... 92 7e-19
gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus] 92 9e-19
ref|XP_015638684.1| PREDICTED: uncharacterized protein LOC107281... 92 1e-18
gb|PNX68664.1| copia LTR rider, partial [Trifolium pratense] 89 1e-18
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 92 1e-18
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 92 1e-18
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 92 1e-18
gb|KMQ86628.1| gag-pol polyprotein [Lasius niger] 87 1e-18
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 92 2e-18
>gb|ONK64083.1| uncharacterized protein A4U43_C07F21910 [Asparagus officinalis]
Length = 162
Score = 137 bits (346), Expect = 1e-38
Identities = 66/117 (56%), Positives = 84/117 (71%)
Frame = +3
Query: 114 EDQNQGHGHVQDSIAAXXXXXXXXXXXXYDNMIVAYALPAEVIEDSIPLTYRETELSSES 293
+ + Q HGHVQ+SIAA Y+++IVAYAL EV++D +P T+RE E SS S
Sbjct: 11 DGETQEHGHVQESIAANRPRMVIRRLTTYNDVIVAYALSIEVVDDMVPSTFREAESSSNS 70
Query: 294 NRWRDAMEDEMISLHKNDTWELAKLPKGKKAIGCKWVYAKKEGSPKEGVRFKARLVA 464
RW +AME+E+ SL KNDTW+LAKLPKGKKAIGCKWVY KK+GS +R+K + VA
Sbjct: 71 IRWMEAMEEEIRSLQKNDTWKLAKLPKGKKAIGCKWVYMKKDGSSIGDIRYKDKFVA 127
>gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium barbadense]
Length = 1034
Score = 114 bits (284), Expect = 2e-26
Identities = 72/156 (46%), Positives = 87/156 (55%), Gaps = 10/156 (6%)
Frame = +3
Query: 27 MMLDKDSAGDQSVSET---------DDQPEPEIDTGVPEDQNQGHGHVQDSIAAXXXXXX 179
MM + DS D + S T +D P T E Q DSIA
Sbjct: 467 MMKNNDSQKDNTTSGTLQQVELEKVNDDPANIEGTNDEEVSTQELLQQHDSIAYRRPRRE 526
Query: 180 XXXXXXYDNMIVAYALPAEVIEDSIPLTYRETELSSESNRWRDAMEDEMISLHKNDTWEL 359
+D+M VAYAL + +D +P TY + +S+S +W+ AM +EM SLHKN TWEL
Sbjct: 527 IRMPARFDDM-VAYALL--IADDDVPSTYTKARSNSDSVKWKQAMNEEMQSLHKNRTWEL 583
Query: 360 AKLPKGKKAIGCKWVYAKKEGSP-KEGVRFKARLVA 464
LPKGKKAIGCKWVYAKKEG P K VR+KARLVA
Sbjct: 584 VTLPKGKKAIGCKWVYAKKEGFPDKNEVRYKARLVA 619
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 108 bits (270), Expect = 2e-24
Identities = 65/137 (47%), Positives = 82/137 (59%), Gaps = 7/137 (5%)
Frame = +3
Query: 75 DDQPEPEIDTGVPEDQNQGHGHVQD------SIAAXXXXXXXXXXXXYDNMIVAYALPAE 236
D++ P +D E+ ++ H+Q+ SIA Y +M V+YA P
Sbjct: 520 DEEKTPMVD----EESDEEEVHIQEPPQQLESIALRKPKRTTIMPARYVDM-VSYASP-- 572
Query: 237 VIEDSIPLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKKAIGCKWVYAKK 416
V D IP TY E SE ++WR AM +EM SL +N TW+LA LPKGKKAIGCKWVYAKK
Sbjct: 573 VASDDIPTTYIEAVKGSEEDKWRSAMSEEMESLRRNQTWKLANLPKGKKAIGCKWVYAKK 632
Query: 417 EG-SPKEGVRFKARLVA 464
+G S K VR+KARLVA
Sbjct: 633 DGFSDKSEVRYKARLVA 649
>ref|WP_105280125.1| hypothetical protein [Escherichia coli]
gb|PPY92707.1| hypothetical protein C5P31_25810 [Escherichia coli]
Length = 324
Score = 104 bits (260), Expect = 5e-24
Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +3
Query: 207 MIVAYALPAEVIEDSIPLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKKA 386
+I A ++ D +P TY++ SSE ++WR AM +EM SL++N TW+LA LPKGKKA
Sbjct: 94 LIETVACATSIVADDVPTTYKDAVQSSEEDKWRIAMNEEMQSLYQNHTWKLANLPKGKKA 153
Query: 387 IGCKWVYAKKEGSPKE-GVRFKARLVA 464
IGCKWV+AKKEG P + VR+KARLVA
Sbjct: 154 IGCKWVFAKKEGFPNQVDVRYKARLVA 180
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 104 bits (260), Expect = 4e-23
Identities = 65/147 (44%), Positives = 87/147 (59%), Gaps = 1/147 (0%)
Frame = +3
Query: 18 PTAMMLDKDSAGDQSVSETDDQPEPEIDTGVPEDQNQGHGHVQDSIAAXXXXXXXXXXXX 197
P ++ +++ D +++E ++ E E+ T + Q+ IA
Sbjct: 723 PKVVIPTRNTTSDSAMAE-EESDEEEVPTQESQQQSA-------PIAVRRQRRDIQKPSR 774
Query: 198 YDNMIVAYALPAEVIEDSIPLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKG 377
+ +M VAYALP + D IP TY E +SSES W AME+EM SL KN TW+LA+LPKG
Sbjct: 775 FMDM-VAYALP---VVDDIPSTYPEAIMSSESGNWAGAMEEEMQSLKKNKTWKLAQLPKG 830
Query: 378 KKAIGCKWVYAKKEG-SPKEGVRFKAR 455
KKAIGCKWV+AKKE S KE VR+KAR
Sbjct: 831 KKAIGCKWVFAKKEEFSNKEDVRYKAR 857
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 102 bits (255), Expect = 2e-22
Identities = 65/147 (44%), Positives = 85/147 (57%), Gaps = 1/147 (0%)
Frame = +3
Query: 18 PTAMMLDKDSAGDQSVSETDDQPEPEIDTGVPEDQNQGHGHVQDSIAAXXXXXXXXXXXX 197
PT ++ +++ D ++E ++ E E+ T + Q+ IA
Sbjct: 669 PTVVIPTRNTTSDSPMAE-EESDEEEVPTQESQQQSA-------PIAVRRQRRDIQKPAR 720
Query: 198 YDNMIVAYALPAEVIEDSIPLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKG 377
+ +M VAYALP + D IP TY LSSES W AME+EM SL KN TW+L +LPKG
Sbjct: 721 FMDM-VAYALP---VVDDIPSTYPGVILSSESGNWAGAMEEEMQSLKKNKTWKLTQLPKG 776
Query: 378 KKAIGCKWVYAKKEG-SPKEGVRFKAR 455
KKAIGCKWV+AKKE S KE VR+KAR
Sbjct: 777 KKAIGCKWVFAKKEKFSNKEDVRYKAR 803
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 102 bits (253), Expect = 4e-22
Identities = 64/142 (45%), Positives = 83/142 (58%), Gaps = 5/142 (3%)
Frame = +3
Query: 54 DQSVSETDDQPEPEIDTGVPEDQNQGHGHVQDSIAAXXXXXXXXXXXX---YDNMIVAYA 224
D E +DQ EP+ +T +PE + SIA +++M V YA
Sbjct: 725 DLKEPEEEDQ-EPQTETDIPESMPSD---IHQSIAQDRPRRVGVRPPTRYGFEDM-VGYA 779
Query: 225 LP-AEVIEDSIPLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKKAIGCKW 401
L AE ++ S P TY+E LSS+S +W AM DEM SLHKN TW+L P G+K I CKW
Sbjct: 780 LQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKW 839
Query: 402 VYAKKEG-SPKEGVRFKARLVA 464
V+ KKEG SP EGV++KAR+VA
Sbjct: 840 VFKKKEGISPAEGVKYKARVVA 861
>ref|XP_020245105.1| uncharacterized protein LOC109823228 [Asparagus officinalis]
Length = 158
Score = 90.5 bits (223), Expect = 5e-20
Identities = 44/98 (44%), Positives = 57/98 (58%)
Frame = +3
Query: 99 DTGVPEDQNQGHGHVQDSIAAXXXXXXXXXXXXYDNMIVAYALPAEVIEDSIPLTYRETE 278
DTG VQD I Y N++V YALP E I++ +P TYRE E
Sbjct: 61 DTGTKGHDQGSTAQVQDLIVVWRLRRDIRLPAMYMNIVVVYALPVESIDEMVPTTYREAE 120
Query: 279 LSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKKAIG 392
SE++ W+ AM++EM SLH N+TWEL +LPKG+K IG
Sbjct: 121 QISETDLWQKAMQEEMKSLHMNNTWELVELPKGRKTIG 158
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 95.1 bits (235), Expect = 1e-19
Identities = 53/88 (60%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Frame = +3
Query: 210 IVAYALP-AEVIEDSI-PLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKK 383
IVAYAL AE IE + P TY E +S + NRW AM DEM SL KN TWEL KLPK KK
Sbjct: 771 IVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKK 830
Query: 384 AIGCKWVYAKKEG-SPKEGVRFKARLVA 464
I CKW++ +KEG SP + R+KARLVA
Sbjct: 831 PIRCKWIFKRKEGMSPSDEARYKARLVA 858
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 93.2 bits (230), Expect = 5e-19
Identities = 52/88 (59%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Frame = +3
Query: 210 IVAYALP-AEVIEDSI-PLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKK 383
IVAYAL AE IE + P TY E +S + NRW AM DEM SL KN TWE KLPK KK
Sbjct: 834 IVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKK 893
Query: 384 AIGCKWVYAKKEG-SPKEGVRFKARLVA 464
I CKW++ +KEG SP + R+KARLVA
Sbjct: 894 PIRCKWIFKRKEGMSPSDEARYKARLVA 921
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 93.2 bits (230), Expect = 5e-19
Identities = 52/88 (59%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Frame = +3
Query: 210 IVAYALP-AEVIEDSI-PLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKK 383
IVAYAL AE IE + P TY E +S + NRW AM DEM SL KN TWE KLPK KK
Sbjct: 834 IVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKK 893
Query: 384 AIGCKWVYAKKEG-SPKEGVRFKARLVA 464
I CKW++ +KEG SP + R+KARLVA
Sbjct: 894 PIRCKWIFKRKEGMSPSDEARYKARLVA 921
>ref|XP_020272572.1| glycine-rich RNA-binding protein 3, mitochondrial-like [Asparagus
officinalis]
Length = 380
Score = 91.7 bits (226), Expect = 7e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +3
Query: 234 EVIEDSIPLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKKAIGCKWVYAK 413
EVI+D +P T+RE E S +S RWR+ ME+EM SL KNDTWEL KLPK KKAI KWVYA
Sbjct: 216 EVIDDMVPSTFREPESSPDSIRWREVMEEEMRSLQKNDTWELVKLPKDKKAIEYKWVYAM 275
Query: 414 KEG 422
KEG
Sbjct: 276 KEG 278
>gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]
Length = 1308
Score = 92.4 bits (228), Expect = 9e-19
Identities = 48/87 (55%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +3
Query: 210 IVAYALPAEVIEDSI-PLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKKA 386
I AY A +EDS PLTY E S +S RW+ AM++EM SLHKN TW L PKG+K
Sbjct: 773 ISAYVFMAAELEDSTEPLTYNEAIASEDSERWQVAMQEEMDSLHKNQTWVLVDKPKGQKI 832
Query: 387 IGCKWVYAKKEGSP-KEGVRFKARLVA 464
+ CKW++ KEG P EG R+KARLVA
Sbjct: 833 VTCKWIFKLKEGIPGVEGPRYKARLVA 859
>ref|XP_015638684.1| PREDICTED: uncharacterized protein LOC107281003 [Oryza sativa
Japonica Group]
Length = 651
Score = 92.0 bits (227), Expect = 1e-18
Identities = 51/88 (57%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Frame = +3
Query: 210 IVAYALP-AEVIEDSI-PLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKK 383
IVAYAL AE IE + P TY + +S + NRW AM DEM SL KN +WEL KLPK KK
Sbjct: 360 IVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKK 419
Query: 384 AIGCKWVYAKKEG-SPKEGVRFKARLVA 464
I CKW++ +KEG SP + R+KARLVA
Sbjct: 420 PIRCKWIFKRKEGMSPSDEARYKARLVA 447
>gb|PNX68664.1| copia LTR rider, partial [Trifolium pratense]
Length = 240
Score = 89.0 bits (219), Expect = 1e-18
Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +3
Query: 210 IVAYALPAEVIEDSIPLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKKAI 389
+V YAL +ED P+T+++ + W AME+EM SLHKN TWE+ LP GK AI
Sbjct: 86 LVEYALS---VEDDEPITFKQAIKDKDRESWLVAMEEEMQSLHKNKTWEVVPLPVGKSAI 142
Query: 390 GCKWVYAKKEGSPKE-GVRFKARLVA 464
GCKWVY +KE K G R+KARLVA
Sbjct: 143 GCKWVYKRKEDHTKSCGTRYKARLVA 168
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 92.0 bits (227), Expect = 1e-18
Identities = 51/88 (57%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Frame = +3
Query: 210 IVAYALP-AEVIEDSI-PLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKK 383
IVAYAL AE IE + P Y E +S + NRW M DEM SL KN TWEL KLPK KK
Sbjct: 541 IVAYALSVAEEIEGNAEPSIYSEAIVSDDCNRWITTMHDEMESLEKNHTWELVKLPKEKK 600
Query: 384 AIGCKWVYAKKEG-SPKEGVRFKARLVA 464
+I CKW++ +KEG SP + R+KARLVA
Sbjct: 601 SIRCKWIFKRKEGMSPSDEARYKARLVA 628
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 92.0 bits (227), Expect = 1e-18
Identities = 52/88 (59%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Frame = +3
Query: 210 IVAYALP-AEVIEDSI-PLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKK 383
IVAYAL AE IE + P TY E +S NRW AM DEM SL KN TWEL KLPK KK
Sbjct: 678 IVAYALSVAEEIEGNAEPSTYSEAIVSDGCNRWITAMHDEMESLEKNHTWELVKLPKEKK 737
Query: 384 AIGCKWVYAKKEG-SPKEGVRFKARLVA 464
I CKW++ +K+G SP + R+KARLVA
Sbjct: 738 PIRCKWIFKRKKGMSPSDEARYKARLVA 765
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 92.0 bits (227), Expect = 1e-18
Identities = 51/88 (57%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Frame = +3
Query: 210 IVAYALP-AEVIEDSI-PLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKK 383
IVAYAL AE IE + P TY + +S + NRW AM DEM SL KN +WEL KLPK KK
Sbjct: 708 IVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKK 767
Query: 384 AIGCKWVYAKKEG-SPKEGVRFKARLVA 464
I CKW++ +KEG SP + R+KARLVA
Sbjct: 768 PIRCKWIFKRKEGMSPSDEARYKARLVA 795
>gb|KMQ86628.1| gag-pol polyprotein [Lasius niger]
Length = 170
Score = 87.0 bits (214), Expect = 1e-18
Identities = 38/73 (52%), Positives = 57/73 (78%)
Frame = +3
Query: 246 DSIPLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKKAIGCKWVYAKKEGS 425
DS+P+TY +S +S++W++AM +E+I+L KN+TW L +LP+G++AIG KWVY KK S
Sbjct: 57 DSVPMTYESAIISIDSDKWKNAMCEEIITLRKNETWTLEELPEGQRAIGFKWVYCKKRDS 116
Query: 426 PKEGVRFKARLVA 464
+ +R+KARLVA
Sbjct: 117 NGDIMRYKARLVA 129
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 91.7 bits (226), Expect = 2e-18
Identities = 51/88 (57%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Frame = +3
Query: 210 IVAYALP-AEVIEDSI-PLTYRETELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKK 383
IVAYAL AE IE + P TY E +S + NRW AM DEM SL KN TWEL KLPK KK
Sbjct: 1006 IVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKK 1065
Query: 384 AIGCKWVYAKKEG-SPKEGVRFKARLVA 464
I CKW++ +KEG S + R+KARL+A
Sbjct: 1066 PIRCKWIFKRKEGISSSDEARYKARLIA 1093