BLASTX nr result

ID: Ophiopogon23_contig00015795 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00015795
         (532 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273791.1| protein CASP [Asparagus officinalis] >gi|114...    56   3e-06

>ref|XP_020273791.1| protein CASP [Asparagus officinalis]
 gb|ONK65299.1| uncharacterized protein A4U43_C07F35700 [Asparagus officinalis]
          Length = 686

 Score = 56.2 bits (134), Expect(2) = 3e-06
 Identities = 27/38 (71%), Positives = 30/38 (78%)
 Frame = +3

Query: 63  SEGIDQRQITPNHDQNTMPKVICNQLDRFRSCLRETEE 176
           SEG DQR I  + DQN+M KVICNQ DRFR+ LRETEE
Sbjct: 487 SEGTDQRHIVSDQDQNSMLKVICNQRDRFRTRLRETEE 524



 Score = 22.3 bits (46), Expect(2) = 3e-06
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 263 EIRLSKEKIGLI 298
           E+RL KEKIGL+
Sbjct: 525 EVRLLKEKIGLL 536


Top