BLASTX nr result
ID: Ophiopogon23_contig00015110
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00015110
(358 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020254988.1| RNA-binding protein 28-like isoform X4 [Aspa... 173 1e-47
ref|XP_020271856.1| RNA-binding protein 28-like isoform X2 [Aspa... 172 3e-47
ref|XP_020271850.1| RNA-binding protein 28-like isoform X1 [Aspa... 172 3e-47
gb|ONK79089.1| uncharacterized protein A4U43_C01F2830 [Asparagus... 172 3e-47
gb|ONK78783.1| uncharacterized protein A4U43_C02F22360, partial ... 171 3e-47
ref|XP_020254987.1| RNA-binding protein 28-like isoform X3 [Aspa... 171 4e-47
ref|XP_020254986.1| RNA-binding protein 28-like isoform X2 [Aspa... 171 4e-47
ref|XP_020254985.1| RNA-binding protein 28-like isoform X1 [Aspa... 171 4e-47
ref|XP_020573020.1| RNA-binding protein 28, partial [Phalaenopsi... 158 8e-43
ref|XP_010931378.1| PREDICTED: RNA-binding protein 28 [Elaeis gu... 155 2e-41
ref|XP_018682764.1| PREDICTED: RNA-binding protein 28 isoform X2... 154 6e-41
ref|XP_009399368.1| PREDICTED: RNA-binding protein 28 isoform X1... 154 6e-41
ref|XP_008792245.1| PREDICTED: RNA-binding protein 28 isoform X3... 152 3e-40
ref|XP_008792244.1| PREDICTED: RNA-binding protein 28 isoform X2... 152 3e-40
ref|XP_008792243.1| PREDICTED: RNA-binding protein 28 isoform X1... 152 3e-40
gb|PKA52794.1| Zinc finger CCCH domain-containing protein 42 [Ap... 151 3e-40
ref|XP_020680912.1| RNA-binding protein 28 [Dendrobium catenatum... 146 2e-38
ref|XP_020091974.1| RNA-binding protein 28 isoform X2 [Ananas co... 146 3e-38
ref|XP_020091972.1| RNA-binding protein 28 isoform X1 [Ananas co... 146 3e-38
ref|XP_020267974.1| serine/arginine-rich SC35-like splicing fact... 134 4e-38
>ref|XP_020254988.1| RNA-binding protein 28-like isoform X4 [Asparagus officinalis]
Length = 986
Score = 173 bits (438), Expect = 1e-47
Identities = 85/104 (81%), Positives = 92/104 (88%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK +KWKVIVRNLPFK+ VNEIRDIF S GFVWDV IPH S +GLSKGFAFVSF K+D
Sbjct: 278 GSKISKWKVIVRNLPFKIKVNEIRDIFSSAGFVWDVYIPHVSEQGLSKGFAFVSFTSKRD 337
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQDDSAD 314
AENAIKNINGR++AKRSIAVDWAVQKKIYVAATKST LQD +D
Sbjct: 338 AENAIKNINGRVVAKRSIAVDWAVQKKIYVAATKSTSLQDVDSD 381
>ref|XP_020271856.1| RNA-binding protein 28-like isoform X2 [Asparagus officinalis]
Length = 1000
Score = 172 bits (435), Expect = 3e-47
Identities = 85/100 (85%), Positives = 90/100 (90%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK +KWKVIVRNLPFKV VNEIRDIF S GFVWDV IPH S +GLSKGFAFVSF K+D
Sbjct: 278 GSKISKWKVIVRNLPFKVKVNEIRDIFSSAGFVWDVFIPHVSEQGLSKGFAFVSFTSKRD 337
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQD 302
AENAIKNINGR++AKRSIAVDWAVQKKIYVAATKST LQD
Sbjct: 338 AENAIKNINGRVVAKRSIAVDWAVQKKIYVAATKSTSLQD 377
>ref|XP_020271850.1| RNA-binding protein 28-like isoform X1 [Asparagus officinalis]
Length = 1001
Score = 172 bits (435), Expect = 3e-47
Identities = 85/100 (85%), Positives = 90/100 (90%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK +KWKVIVRNLPFKV VNEIRDIF S GFVWDV IPH S +GLSKGFAFVSF K+D
Sbjct: 278 GSKISKWKVIVRNLPFKVKVNEIRDIFSSAGFVWDVFIPHVSEQGLSKGFAFVSFTSKRD 337
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQD 302
AENAIKNINGR++AKRSIAVDWAVQKKIYVAATKST LQD
Sbjct: 338 AENAIKNINGRVVAKRSIAVDWAVQKKIYVAATKSTSLQD 377
>gb|ONK79089.1| uncharacterized protein A4U43_C01F2830 [Asparagus officinalis]
Length = 1310
Score = 172 bits (435), Expect = 3e-47
Identities = 85/100 (85%), Positives = 90/100 (90%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK +KWKVIVRNLPFKV VNEIRDIF S GFVWDV IPH S +GLSKGFAFVSF K+D
Sbjct: 634 GSKISKWKVIVRNLPFKVKVNEIRDIFSSAGFVWDVFIPHVSEQGLSKGFAFVSFTSKRD 693
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQD 302
AENAIKNINGR++AKRSIAVDWAVQKKIYVAATKST LQD
Sbjct: 694 AENAIKNINGRVVAKRSIAVDWAVQKKIYVAATKSTSLQD 733
>gb|ONK78783.1| uncharacterized protein A4U43_C02F22360, partial [Asparagus
officinalis]
Length = 925
Score = 171 bits (434), Expect = 3e-47
Identities = 84/100 (84%), Positives = 90/100 (90%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK +KWKVIVRNLPFK+ VNEIRDIF S GFVWDV IPH S +GLSKGFAFVSF K+D
Sbjct: 216 GSKISKWKVIVRNLPFKIKVNEIRDIFSSAGFVWDVYIPHVSEQGLSKGFAFVSFTSKRD 275
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQD 302
AENAIKNINGR++AKRSIAVDWAVQKKIYVAATKST LQD
Sbjct: 276 AENAIKNINGRVVAKRSIAVDWAVQKKIYVAATKSTSLQD 315
>ref|XP_020254987.1| RNA-binding protein 28-like isoform X3 [Asparagus officinalis]
Length = 986
Score = 171 bits (434), Expect = 4e-47
Identities = 84/100 (84%), Positives = 90/100 (90%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK +KWKVIVRNLPFK+ VNEIRDIF S GFVWDV IPH S +GLSKGFAFVSF K+D
Sbjct: 278 GSKISKWKVIVRNLPFKIKVNEIRDIFSSAGFVWDVYIPHVSEQGLSKGFAFVSFTSKRD 337
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQD 302
AENAIKNINGR++AKRSIAVDWAVQKKIYVAATKST LQD
Sbjct: 338 AENAIKNINGRVVAKRSIAVDWAVQKKIYVAATKSTSLQD 377
>ref|XP_020254986.1| RNA-binding protein 28-like isoform X2 [Asparagus officinalis]
Length = 987
Score = 171 bits (434), Expect = 4e-47
Identities = 84/100 (84%), Positives = 90/100 (90%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK +KWKVIVRNLPFK+ VNEIRDIF S GFVWDV IPH S +GLSKGFAFVSF K+D
Sbjct: 278 GSKISKWKVIVRNLPFKIKVNEIRDIFSSAGFVWDVYIPHVSEQGLSKGFAFVSFTSKRD 337
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQD 302
AENAIKNINGR++AKRSIAVDWAVQKKIYVAATKST LQD
Sbjct: 338 AENAIKNINGRVVAKRSIAVDWAVQKKIYVAATKSTSLQD 377
>ref|XP_020254985.1| RNA-binding protein 28-like isoform X1 [Asparagus officinalis]
Length = 989
Score = 171 bits (434), Expect = 4e-47
Identities = 84/100 (84%), Positives = 90/100 (90%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK +KWKVIVRNLPFK+ VNEIRDIF S GFVWDV IPH S +GLSKGFAFVSF K+D
Sbjct: 278 GSKISKWKVIVRNLPFKIKVNEIRDIFSSAGFVWDVYIPHVSEQGLSKGFAFVSFTSKRD 337
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQD 302
AENAIKNINGR++AKRSIAVDWAVQKKIYVAATKST LQD
Sbjct: 338 AENAIKNINGRVVAKRSIAVDWAVQKKIYVAATKSTSLQD 377
>ref|XP_020573020.1| RNA-binding protein 28, partial [Phalaenopsis equestris]
Length = 726
Score = 158 bits (400), Expect = 8e-43
Identities = 73/104 (70%), Positives = 89/104 (85%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK KW++IVRNLPFK+T+NEI+DIF + GFVWDVCIPH + +G+SKGFAFVSF CKKD
Sbjct: 257 GSKARKWRLIVRNLPFKITINEIKDIFSTSGFVWDVCIPHRTEEGVSKGFAFVSFTCKKD 316
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQDDSAD 314
AE AI++ING++IAKR IAVDW+V KKIY +ATKST + SAD
Sbjct: 317 AEKAIQDINGKMIAKRPIAVDWSVPKKIYASATKSTSKEGKSAD 360
>ref|XP_010931378.1| PREDICTED: RNA-binding protein 28 [Elaeis guineensis]
Length = 982
Score = 155 bits (391), Expect = 2e-41
Identities = 72/100 (72%), Positives = 85/100 (85%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSKT KW+VIVRNLPFKVT+ +I+DIF S GFVWDV IP S +G+SKGFAFVSF CK+D
Sbjct: 264 GSKTRKWRVIVRNLPFKVTIGQIKDIFSSEGFVWDVSIPQKSEEGISKGFAFVSFTCKQD 323
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQD 302
AENAIKN+NGR+IAKR IAVDWAV K++Y ATKS+ +D
Sbjct: 324 AENAIKNVNGRVIAKRPIAVDWAVPKRVYDVATKSSATKD 363
>ref|XP_018682764.1| PREDICTED: RNA-binding protein 28 isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 984
Score = 154 bits (388), Expect = 6e-41
Identities = 74/105 (70%), Positives = 86/105 (81%), Gaps = 3/105 (2%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK KW+VIVRNLPFK TV+EIR+IF S GFVWDV IPH S +G+SKGFAFVSF CK+D
Sbjct: 272 GSKARKWRVIVRNLPFKATVSEIREIFSSAGFVWDVLIPHKSDEGVSKGFAFVSFTCKQD 331
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTC---LQDDS 308
AENAIKNINGR+IAKR++AVDWAV K++Y AT + QDDS
Sbjct: 332 AENAIKNINGRVIAKRTVAVDWAVSKRVYSVATAAASGEGFQDDS 376
>ref|XP_009399368.1| PREDICTED: RNA-binding protein 28 isoform X1 [Musa acuminata subsp.
malaccensis]
ref|XP_009399376.1| PREDICTED: RNA-binding protein 28 isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 987
Score = 154 bits (388), Expect = 6e-41
Identities = 74/105 (70%), Positives = 86/105 (81%), Gaps = 3/105 (2%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK KW+VIVRNLPFK TV+EIR+IF S GFVWDV IPH S +G+SKGFAFVSF CK+D
Sbjct: 272 GSKARKWRVIVRNLPFKATVSEIREIFSSAGFVWDVLIPHKSDEGVSKGFAFVSFTCKQD 331
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTC---LQDDS 308
AENAIKNINGR+IAKR++AVDWAV K++Y AT + QDDS
Sbjct: 332 AENAIKNINGRVIAKRTVAVDWAVSKRVYSVATAAASGEGFQDDS 376
>ref|XP_008792245.1| PREDICTED: RNA-binding protein 28 isoform X3 [Phoenix dactylifera]
Length = 917
Score = 152 bits (383), Expect = 3e-40
Identities = 72/102 (70%), Positives = 86/102 (84%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSKT KW+VIVRNLPFKVT+ +I+DIF S GFVWDV IP S +G+SKGFAFVSF CK+D
Sbjct: 201 GSKTRKWRVIVRNLPFKVTIGKIKDIFSSAGFVWDVLIPQKS-EGISKGFAFVSFTCKQD 259
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQDDS 308
AENAIKN+NGR+IAKR IAVDWAV K++Y ATKS +D++
Sbjct: 260 AENAIKNVNGRVIAKRPIAVDWAVPKRVYEVATKSATSKDEN 301
>ref|XP_008792244.1| PREDICTED: RNA-binding protein 28 isoform X2 [Phoenix dactylifera]
Length = 980
Score = 152 bits (383), Expect = 3e-40
Identities = 72/102 (70%), Positives = 86/102 (84%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSKT KW+VIVRNLPFKVT+ +I+DIF S GFVWDV IP S +G+SKGFAFVSF CK+D
Sbjct: 264 GSKTRKWRVIVRNLPFKVTIGKIKDIFSSAGFVWDVLIPQKS-EGISKGFAFVSFTCKQD 322
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQDDS 308
AENAIKN+NGR+IAKR IAVDWAV K++Y ATKS +D++
Sbjct: 323 AENAIKNVNGRVIAKRPIAVDWAVPKRVYEVATKSATSKDEN 364
>ref|XP_008792243.1| PREDICTED: RNA-binding protein 28 isoform X1 [Phoenix dactylifera]
Length = 983
Score = 152 bits (383), Expect = 3e-40
Identities = 72/102 (70%), Positives = 86/102 (84%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSKT KW+VIVRNLPFKVT+ +I+DIF S GFVWDV IP S +G+SKGFAFVSF CK+D
Sbjct: 267 GSKTRKWRVIVRNLPFKVTIGKIKDIFSSAGFVWDVLIPQKS-EGISKGFAFVSFTCKQD 325
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQDDS 308
AENAIKN+NGR+IAKR IAVDWAV K++Y ATKS +D++
Sbjct: 326 AENAIKNVNGRVIAKRPIAVDWAVPKRVYEVATKSATSKDEN 367
>gb|PKA52794.1| Zinc finger CCCH domain-containing protein 42 [Apostasia
shenzhenica]
Length = 712
Score = 151 bits (381), Expect = 3e-40
Identities = 72/104 (69%), Positives = 83/104 (79%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK KW+VIVRNLPFKVT NEI+DIF + GFVWDVCIPHS +G SKGFAF+SF CK+D
Sbjct: 21 GSKARKWRVIVRNLPFKVTANEIKDIFATTGFVWDVCIPHSE-EGKSKGFAFISFTCKQD 79
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQDDSAD 314
AE AI+NING+++AKR +AVDWAV KKIY A KST S D
Sbjct: 80 AEKAIQNINGQLVAKRPVAVDWAVPKKIYAHAVKSTADDGKSTD 123
>ref|XP_020680912.1| RNA-binding protein 28 [Dendrobium catenatum]
ref|XP_020680913.1| RNA-binding protein 28 [Dendrobium catenatum]
gb|PKU86489.1| 33 kDa ribonucleoprotein, chloroplastic [Dendrobium catenatum]
Length = 953
Score = 146 bits (369), Expect = 2e-38
Identities = 68/104 (65%), Positives = 86/104 (82%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK KW++IVRNLPFKVT+N+I+D+F + GFVWDV IP+ + +G+SKGFAFVSF CKKD
Sbjct: 260 GSKARKWRLIVRNLPFKVTINDIKDLFSTSGFVWDVYIPNRTEEGVSKGFAFVSFTCKKD 319
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQDDSAD 314
AE AI++ING+++AKR IAVDWA+ KKIY ATKST + S D
Sbjct: 320 AEKAIQDINGKMVAKRPIAVDWAIPKKIYTNATKSTTEEVKSTD 363
>ref|XP_020091974.1| RNA-binding protein 28 isoform X2 [Ananas comosus]
Length = 942
Score = 146 bits (368), Expect = 3e-38
Identities = 67/100 (67%), Positives = 82/100 (82%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK KW+VIVRNLPFKVT E++D+F S GFVWDV IPH+S +G+SKGFAFVS CK+D
Sbjct: 260 GSKVRKWRVIVRNLPFKVTTKEVKDVFSSAGFVWDVLIPHNS-EGISKGFAFVSLTCKQD 318
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQD 302
AE AIK+INGR+IAKR++AVDWAV K++Y AT S +D
Sbjct: 319 AEKAIKDINGRVIAKRTVAVDWAVSKRVYAVATNSAASED 358
>ref|XP_020091972.1| RNA-binding protein 28 isoform X1 [Ananas comosus]
Length = 945
Score = 146 bits (368), Expect = 3e-38
Identities = 67/100 (67%), Positives = 82/100 (82%)
Frame = +3
Query: 3 GSKTTKWKVIVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKD 182
GSK KW+VIVRNLPFKVT E++D+F S GFVWDV IPH+S +G+SKGFAFVS CK+D
Sbjct: 263 GSKVRKWRVIVRNLPFKVTTKEVKDVFSSAGFVWDVLIPHNS-EGISKGFAFVSLTCKQD 321
Query: 183 AENAIKNINGRIIAKRSIAVDWAVQKKIYVAATKSTCLQD 302
AE AIK+INGR+IAKR++AVDWAV K++Y AT S +D
Sbjct: 322 AEKAIKDINGRVIAKRTVAVDWAVSKRVYAVATNSAASED 361
>ref|XP_020267974.1| serine/arginine-rich SC35-like splicing factor SCL28 isoform X2
[Asparagus officinalis]
Length = 122
Score = 134 bits (336), Expect = 4e-38
Identities = 66/92 (71%), Positives = 75/92 (81%)
Frame = +3
Query: 30 IVRNLPFKVTVNEIRDIFCSVGFVWDVCIPHSSVKGLSKGFAFVSFMCKKDAENAIKNIN 209
+++N +KV VNEIRDIF S FVWD+ IPH S +GLSKGFAFVSF K+DAENAIKNIN
Sbjct: 24 LMKNWIYKVKVNEIRDIFSSASFVWDIYIPHVSEQGLSKGFAFVSFTSKRDAENAIKNIN 83
Query: 210 GRIIAKRSIAVDWAVQKKIYVAATKSTCLQDD 305
R++AKR IAVDWAV KKI VA TKST LQDD
Sbjct: 84 DRVVAKRFIAVDWAVHKKICVATTKSTSLQDD 115