BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00015001
         (1622 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020258675.1| protein RNA-directed DNA methylation 3, part...   532   e-169
gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagu...   525   e-166
ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylat...   367   e-108
ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylat...   367   e-108
ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylat...   365   e-108
ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylat...   365   e-108
ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylat...   361   e-106
ref|XP_020091607.1| protein RNA-directed DNA methylation 3 isofo...   338   2e-99
ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isofo...   338   5e-99
ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isofo...   338   7e-99
ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isofo...   338   7e-99
ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isofo...   338   7e-99
gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas co...   337   1e-98
ref|XP_020587140.1| protein RNA-directed DNA methylation 3 [Phal...   318   6e-92
ref|XP_004961584.1| protein RNA-directed DNA methylation 3 [Seta...   318   1e-91
gb|PAN18741.1| hypothetical protein PAHAL_C02415 [Panicum hallii]     310   5e-89
gb|PAN18742.1| hypothetical protein PAHAL_C02415 [Panicum hallii]     310   5e-89
ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dend...   303   1e-86
ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylat...   302   2e-86
ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylat...   302   2e-86

>ref|XP_020258675.1| protein RNA-directed DNA methylation 3, partial [Asparagus
            officinalis]
          Length = 1734

 Score =  532 bits (1370), Expect = e-169
 Identities = 313/561 (55%), Positives = 351/561 (62%), Gaps = 22/561 (3%)
 Frame = +1

Query: 1    EEDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXX 180
            EEDVSWLS+VYNVRKK+K S+ +D KG+SE GN F LHDLVLFGRK FGV          
Sbjct: 339  EEDVSWLSSVYNVRKKIKPSKDSDLKGSSEKGNSFNLHDLVLFGRKAFGVIIDMGKDGTM 398

Query: 181  XXXXXX-EGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVR 357
                   EGQEV+T+K+E IK  CVDKMFTASDRHRKTI IND +KVL+GPLEGR+G   
Sbjct: 399  KVLRGDKEGQEVITVKAEAIKSQCVDKMFTASDRHRKTICINDIIKVLEGPLEGRQGTAC 458

Query: 358  HMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQ 537
            HMYKGTLFIYDE+QE NSGIFC KSDLCE ITP KD SF K GNK+SSSF+Q PV S EQ
Sbjct: 459  HMYKGTLFIYDESQEGNSGIFCTKSDLCEKITPAKD-SFGK-GNKASSSFSQDPVISSEQ 516

Query: 538  EDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV 717
            EDSS TFSRNR  ESNQ FS+GQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV
Sbjct: 517  EDSSCTFSRNRRRESNQIFSVGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV 576

Query: 718  EEQFLSIPNIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDGASSSWQALSTST 897
            +EQ LS PN+KRD A               GGLSGNGEQT+  SSWDG SSSWQ LSTS 
Sbjct: 577  DEQLLSDPNLKRDTAG--------------GGLSGNGEQTLGASSWDGGSSSWQDLSTSA 622

Query: 898  L-FGNNNDQKTEQEQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQGADPWGSKAS 1074
              F  NNDQK+ QEQGADPW    S VAGD E SDPW SK    A      ADPWGSKAS
Sbjct: 623  FSFSANNDQKSGQEQGADPWAGRVSHVAGDQEQSDPWVSKASITAGADGGSADPWGSKAS 682

Query: 1075 ISAGDKEQGADAWGRNMAGASTEKEERADPWGGKTVLGDSSHSDTAFGSWVKVSSTSGEH 1254
            ++A D    AD WG + A         ADPWG KT L   +   +A     K S  + E 
Sbjct: 683  LAARDDGGSADPWG-SKASLPAGDGGSADPWGSKTSLAAGAEGSSADPWGSKASLAAREG 741

Query: 1255 NSWNKSEGGGFEKDGDG-----WNKPCVKTTPPTAKADDKQGADPWGSKVSVTARDDTQG 1419
             S + S        GDG     W     K TP T    D   ADPWG+K++  AR+  QG
Sbjct: 742  GSADPSGNKASLAAGDGGSADPWGS---KQTPGTR---DGGSADPWGTKLTPGAREQEQG 795

Query: 1420 ADPWGSK--PSLPAEADKGGADPWASKRAVG--ARADKGGADPWASKRAVGARE------ 1569
             DPWGS    +  A+ +K  ADPW  K   G  + +DK   D WA        E      
Sbjct: 796  VDPWGSSIAGTTTADNNKPRADPWGGKTTHGGSSHSDK-TFDSWAKASTASGEENSVWNK 854

Query: 1570 -----LEQGDDPWGNKMAATS 1617
                  E+  D W    A++S
Sbjct: 855  TEGVGCEKDGDGWNKPSASSS 875



 Score =  230 bits (586), Expect = 2e-61
 Identities = 127/285 (44%), Positives = 166/285 (58%), Gaps = 8/285 (2%)
 Frame = +1

Query: 778  DIFGTQERFTGGLSGN----GEQTVVTSSWDGASSSWQALSTSTLFGNNNDQKTEQEQGA 945
            D +G++     G  G+    G +T + +  +G+S+          +G+       +   A
Sbjct: 693  DPWGSKASLPAGDGGSADPWGSKTSLAAGAEGSSAD--------PWGSKASLAAREGGSA 744

Query: 946  DPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQGADPWGSKASISAGDKEQGADAWGRNM 1125
            DP G+ AS+ AGD   +DPWGSK  P   D    ADPWG+K +  A ++EQG D WG ++
Sbjct: 745  DPSGNKASLAAGDGGSADPWGSKQTPGTRDGGS-ADPWGTKLTPGAREQEQGVDPWGSSI 803

Query: 1126 AGAST--EKEERADPWGGKTVLGDSSHSDTAFGSWVKVSSTSGEHNS-WNKSEGGGFEKD 1296
            AG +T    + RADPWGGKT  G SSHSD  F SW K S+ SGE NS WNK+EG G EKD
Sbjct: 804  AGTTTADNNKPRADPWGGKTTHGGSSHSDKTFDSWAKASTASGEENSVWNKTEGVGCEKD 863

Query: 1297 GDGWNKPCVKTTPPTAKADDKQGADPWGSKVSVTARDDTQGADPWGSKPSLPAEADKGGA 1476
            GDGWNKP   ++     +  ++GAD W SKV   A+D  +G D WGSK S+ A  D+GG 
Sbjct: 864  GDGWNKPSASSS----FSGRERGADQWESKVPAAAKDHARGVDAWGSKASV-ANKDQGGE 918

Query: 1477 DPWASKRAVGARADKG-GADPWASKRAVGARELEQGDDPWGNKMA 1608
            DPWASK   G RA++G G DPW S  AV  R+ EQ  D W +K A
Sbjct: 919  DPWASKVTAGVRAEQGQGTDPWVSNVAVATRDKEQKFDTWSSKAA 963



 Score =  195 bits (496), Expect = 1e-49
 Identities = 118/248 (47%), Positives = 140/248 (56%), Gaps = 13/248 (5%)
 Frame = +1

Query: 904  GNNNDQKTEQEQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQGADP------WGS 1065
            G  N+   ++  G+  WGS          G   WG       T TE+  D       WGS
Sbjct: 1295 GTGNEDNQDRTGGS--WGSG--------RGRGQWGGS----GTATEENQDKSGEFGGWGS 1340

Query: 1066 KASISAGDKEQGADAWGRNMAGASTEKEERADPWGGKTVLGDSSHSDTAFGSWVKVSSTS 1245
              S +  ++E+GA  WG ++AGAST+KE+ ADPWG K    +S+HSD AF SWVK SSTS
Sbjct: 1341 GKSWNQKEQERGAGPWGSSVAGASTDKEQNADPWGSKATPSESNHSDKAFDSWVKASSTS 1400

Query: 1246 GEHNS-WNKSEGGGFE-KDGDGWNKPCVKTTPPT---AKADDKQGADPWGSKVSVTARDD 1410
            GE NS W K+ GGG   KDGDGWNK   KT   T      D  +GA  W S    ++RD 
Sbjct: 1401 GERNSLWAKTTGGGGSGKDGDGWNKSSTKTISSTLGMISPDQGEGAATWASG---SSRDK 1457

Query: 1411 TQGADPWGSKPSLPAEADKGGADPWASKRAVGARADKG-GADPWASKRAVGAR-ELEQGD 1584
            TQGADPWGSK S PA  DKG ADPW  K A  ARAD G GAD W SK A  +R + EQ  
Sbjct: 1458 TQGADPWGSKAS-PAAKDKGEADPWGGKLAASARADPGQGADAWGSKAAAPSRADKEQKA 1516

Query: 1585 DPWGNKMA 1608
            D WG+K A
Sbjct: 1517 DAWGSKAA 1524



 Score =  100 bits (248), Expect = 4e-18
 Identities = 62/150 (41%), Positives = 78/150 (52%)
 Frame = +1

Query: 1171 GKTVLGDSSHSDTAFGSWVKVSSTSGEHNSWNKSEGGGFEKDGDGWNKPCVKTTPPTAKA 1350
            G+  LG SS  D    SW  +S TS    S N  +  G E+  D W          +  A
Sbjct: 599  GEQTLGASSW-DGGSSSWQDLS-TSAFSFSANNDQKSGQEQGADPW------AGRVSHVA 650

Query: 1351 DDKQGADPWGSKVSVTARDDTQGADPWGSKPSLPAEADKGGADPWASKRAVGARADKGGA 1530
             D++ +DPW SK S+TA  D   ADPWGSK SL A  D G ADPW SK ++ A  D G A
Sbjct: 651  GDQEQSDPWVSKASITAGADGGSADPWGSKASLAARDDGGSADPWGSKASLPA-GDGGSA 709

Query: 1531 DPWASKRAVGARELEQGDDPWGNKMAATSR 1620
            DPW SK ++ A       DPWG+K +  +R
Sbjct: 710  DPWGSKTSLAAGAEGSSADPWGSKASLAAR 739



 Score = 99.8 bits (247), Expect = 5e-18
 Identities = 85/295 (28%), Positives = 115/295 (38%), Gaps = 35/295 (11%)
 Frame = +1

Query: 817  SGNGEQTVVTSSWDGASSS------WQALSTSTLFGNNNDQKTEQEQGADPWGSHASIVA 978
            S +GE+  + +   G   S      W   ST T+         +Q +GA  W S +S   
Sbjct: 1398 STSGERNSLWAKTTGGGGSGKDGDGWNKSSTKTISSTLGMISPDQGEGAATWASGSS--- 1454

Query: 979  GDHEGSDPWGSKLVPVATDTEQGADPWGSKASISAGDK------------------EQGA 1104
                              D  QGADPWGSKAS +A DK                   QGA
Sbjct: 1455 -----------------RDKTQGADPWGSKASPAAKDKGEADPWGGKLAASARADPGQGA 1497

Query: 1105 DAWGRNMAGAS-TEKEERADPWGGKTVLGDSSHSDTAFGSWVKVSSTSGEHNSWNKSEGG 1281
            DAWG   A  S  +KE++AD WG K   GDSS++               +++ WNK  G 
Sbjct: 1498 DAWGSKAAAPSRADKEQKADAWGSKAAPGDSSNN---------------QNSPWNKVAGE 1542

Query: 1282 GFEKDGDGWNKPCVKTTPPTAKADDKQGADPWGSKVSVTARDDTQ-----GADPWGS--K 1440
            G  KDGDGW+K    +T        K GAD W    S  +   +        D W S  K
Sbjct: 1543 GSGKDGDGWSKAATYST--------KNGADGWDKPKSFGSNQASNWKKEGNEDAWNSSNK 1594

Query: 1441 PSLPAEADKGGAD---PWASKRAVGARADKGGADPWASKRAVGARELEQGDDPWG 1596
            P +  +  +  +    P  S  A    + K G + W +     A +  +G D WG
Sbjct: 1595 PKVEGQGSEPSSSWEKPKVSTGATWGSSSKNGTNEWNNGGNEDAWKKPRGSD-WG 1648



 Score = 99.4 bits (246), Expect = 6e-18
 Identities = 80/280 (28%), Positives = 120/280 (42%), Gaps = 30/280 (10%)
 Frame = +1

Query: 844  TSSWDGASSSWQALSTSTLFGNNNDQKTEQ---EQGADPWG--SHASIVAGDHEGSDPWG 1008
            +S  D    SW   ST++   N+   KTE    E+  D W   S +S  +G   G+D W 
Sbjct: 828  SSHSDKTFDSWAKASTASGEENSVWNKTEGVGCEKDGDGWNKPSASSSFSGRERGADQWE 887

Query: 1009 SKLVPVATDTEQGADPWGSKASISAGD------------------KEQGADAWGRNMAGA 1134
            SK+   A D  +G D WGSKAS++  D                  + QG D W  N+A A
Sbjct: 888  SKVPAAAKDHARGVDAWGSKASVANKDQGGEDPWASKVTAGVRAEQGQGTDPWVSNVAVA 947

Query: 1135 STEKEERADPWGGKTVLGDSSHSDTAFGSWVKVSSTSGEHNSWNKSEGGGFEKDGDGWNK 1314
            + +KE++ D W  K  L  +S  D              +++SW+K+ GGG  +DGD W+K
Sbjct: 948  TRDKEQKFDTWSSKAALAPNSVGD--------------QNSSWDKAAGGGSGEDGDSWSK 993

Query: 1315 PCVKTTPPTAKADDKQGADPWGSKVSVTARDDTQGADPWGSKPSL--PAEADKGGADPWA 1488
            P  K    T  A +   +  W      TA   T+ A+    +PS    A+    G   W 
Sbjct: 994  PSCK---GTTVAVNNSSSSSW-----ETAAIGTKSAEKQEGEPSSWDKAKVSSDGQSGW- 1044

Query: 1489 SKRAVGARADKGGADPWASKRAVGARELEQ-----GDDPW 1593
               A G+ + K   D W + ++ G  ++        +D W
Sbjct: 1045 -DMAAGS-SIKNNTDGWNNPKSSGGDQVSNWKMGGNEDAW 1082



 Score = 72.4 bits (176), Expect = 2e-09
 Identities = 89/347 (25%), Positives = 128/347 (36%), Gaps = 73/347 (21%)
 Frame = +1

Query: 799  RFTGGLSGNGEQTVVTSSWDGASSSWQALSTSTLFGNNNDQKTEQEQGAD---PWGS--- 960
            R+ G  + + E    +S + G   S +        G  +  +  +E   D    WGS   
Sbjct: 1163 RYGGRGNRDEENQDGSSEFGGGRGSGRGRGRGRYGGRGSRDEDNKEGSGDFGGGWGSGRG 1222

Query: 961  -----HASIVAGDHEGSDPWGSKLVPVATDTEQGADPWGSKASISAGDKEQGADAWGRNM 1125
                 +    AGD E  D  GS  +   +   +G   WG      AGD +   D  G   
Sbjct: 1223 RGRGWYGGRSAGDGENQD--GSGDLGWGSGRGRG---WGRYGGRGAGDGDN-QDRQGDYG 1276

Query: 1126 AGASTEKEERADPWGGKTVLGDSSHSDTAFGSWVKV--------SSTSGEHNSWNKSEGG 1281
             G  + +      +G +   G+  + D   GSW           S T+ E N     E G
Sbjct: 1277 GGWESGRGGGRGRYGERGGTGNEDNQDRTGGSWGSGRGRGQWGGSGTATEENQDKSGEFG 1336

Query: 1282 GFEKDGDGWNKPCVKTTPPTAKADDKQGADPWGSKVSVTARDDTQGADPWGSK--PSLPA 1455
            G+   G  WN+            + ++GA PWGS V+  + D  Q ADPWGSK  PS   
Sbjct: 1337 GWGS-GKSWNQK-----------EQERGAGPWGSSVAGASTDKEQNADPWGSKATPSESN 1384

Query: 1456 EADK-------------------------GGA----DPW--------------------- 1485
             +DK                         GG+    D W                     
Sbjct: 1385 HSDKAFDSWVKASSTSGERNSLWAKTTGGGGSGKDGDGWNKSSTKTISSTLGMISPDQGE 1444

Query: 1486 -ASKRAVGARADKG-GADPWASKRAVGARELEQGDDPWGNKMAATSR 1620
             A+  A G+  DK  GADPW SK +  A++  +  DPWG K+AA++R
Sbjct: 1445 GAATWASGSSRDKTQGADPWGSKASPAAKDKGEA-DPWGGKLAASAR 1490


>gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagus officinalis]
          Length = 1710

 Score =  525 bits (1351), Expect = e-166
 Identities = 316/561 (56%), Positives = 356/561 (63%), Gaps = 22/561 (3%)
 Frame = +1

Query: 1    EEDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXX 180
            EEDVSWLS+VYNVRKK+K S+ +D KG+SE GN F LHDLVLFGRK FGV          
Sbjct: 320  EEDVSWLSSVYNVRKKIKPSKDSDLKGSSEKGNSFNLHDLVLFGRKAFGVIIDMGKDGTM 379

Query: 181  XXXXXX-EGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVR 357
                   EGQEV+T+K+E IK  CVDKMFTASDRHRKTI IND +KVL+GPLEGR+G   
Sbjct: 380  KVLRGDKEGQEVITVKAEAIKSQCVDKMFTASDRHRKTICINDIIKVLEGPLEGRQGTAC 439

Query: 358  HMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQ 537
            HMYKGTLFIYDE+QE NSGIFC KSDLCE ITP KD SF K GNK+SSSF+Q PV S EQ
Sbjct: 440  HMYKGTLFIYDESQEGNSGIFCTKSDLCEKITPAKD-SFGK-GNKASSSFSQDPVISSEQ 497

Query: 538  EDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV 717
            EDSS  FSRNR  ESNQ FS+GQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV
Sbjct: 498  EDSS--FSRNRRRESNQIFSVGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV 555

Query: 718  EEQFLSIPNIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDGASSSWQALSTST 897
            +EQ LS PN+KRD A               GGLSGNGEQT+  SSWDG SSSWQ LSTS 
Sbjct: 556  DEQLLSDPNLKRDTAG--------------GGLSGNGEQTLGASSWDGGSSSWQDLSTSA 601

Query: 898  L-FGNNNDQKTEQEQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQGADPWGSKAS 1074
              F  NNDQK+ QEQGADPW    S VAGD E SDPW SK    A D    ADPWGSKAS
Sbjct: 602  FSFSANNDQKSGQEQGADPWAGRVSHVAGDQEQSDPWVSKASITAGD-GGSADPWGSKAS 660

Query: 1075 ISAGDKEQGADAWGRNMAGASTEKEERADPWGGKTVL--GDSSHSDTAFGSWVKVSSTSG 1248
            ++A D    AD WG + A         ADPWG KT L  G+ S +D  +GS   +++  G
Sbjct: 661  LAARDDGGSADPWG-SKASLPAGDGGSADPWGSKTSLAAGEGSSAD-PWGSKASLAAREG 718

Query: 1249 --EHNSWNK-SEGGGFEKDGDGWNKPCVKTTPPTAKADDKQGADPWGSKVSVTARDDTQG 1419
                 S NK S   G     D W     K TP T    D   ADPWG+K++  AR+  QG
Sbjct: 719  GSADPSGNKASLAAGDGGSADPWGS---KQTPGTR---DGGSADPWGTKLTPGAREQEQG 772

Query: 1420 ADPWGSK--PSLPAEADKGGADPWASKRAVG--ARADKGGADPWASKRAVGARE------ 1569
             DPWGS    +  A+ +K  ADPW  K   G  + +DK   D WA        E      
Sbjct: 773  VDPWGSSIAGTTTADNNKPRADPWGGKTTHGGSSHSDK-TFDSWAKASTASGEENSVWNK 831

Query: 1570 -----LEQGDDPWGNKMAATS 1617
                  E+  D W    A++S
Sbjct: 832  TEGVGCEKDGDGWNKPSASSS 852



 Score =  229 bits (584), Expect = 3e-61
 Identities = 120/245 (48%), Positives = 151/245 (61%), Gaps = 4/245 (1%)
 Frame = +1

Query: 886  STSTLFGNNNDQKTEQEQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQGADPWGS 1065
            S++  +G+       +   ADP G+ AS+ AGD   +DPWGSK  P   D    ADPWG+
Sbjct: 702  SSADPWGSKASLAAREGGSADPSGNKASLAAGDGGSADPWGSKQTPGTRDGGS-ADPWGT 760

Query: 1066 KASISAGDKEQGADAWGRNMAGAST--EKEERADPWGGKTVLGDSSHSDTAFGSWVKVSS 1239
            K +  A ++EQG D WG ++AG +T    + RADPWGGKT  G SSHSD  F SW K S+
Sbjct: 761  KLTPGAREQEQGVDPWGSSIAGTTTADNNKPRADPWGGKTTHGGSSHSDKTFDSWAKAST 820

Query: 1240 TSGEHNS-WNKSEGGGFEKDGDGWNKPCVKTTPPTAKADDKQGADPWGSKVSVTARDDTQ 1416
             SGE NS WNK+EG G EKDGDGWNKP   ++     +  ++GAD W SKV   A+D  +
Sbjct: 821  ASGEENSVWNKTEGVGCEKDGDGWNKPSASSS----FSGRERGADQWESKVPAAAKDHAR 876

Query: 1417 GADPWGSKPSLPAEADKGGADPWASKRAVGARADKG-GADPWASKRAVGARELEQGDDPW 1593
            G D WGSK S+ A  D+GG DPWASK   G RA++G G DPW S  AV  R+ EQ  D W
Sbjct: 877  GVDAWGSKASV-ANKDQGGEDPWASKVTAGVRAEQGQGTDPWVSNVAVATRDKEQKFDTW 935

Query: 1594 GNKMA 1608
             +K A
Sbjct: 936  SSKAA 940



 Score =  191 bits (486), Expect = 2e-48
 Identities = 115/247 (46%), Positives = 137/247 (55%), Gaps = 12/247 (4%)
 Frame = +1

Query: 904  GNNNDQKTEQEQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQGADP------WGS 1065
            G  N+   ++  G+  WGS          G   WG       T TE+  D       WGS
Sbjct: 1272 GTGNEDNQDRTGGS--WGSG--------RGRGQWGGS----GTATEENQDKSGEFGGWGS 1317

Query: 1066 KASISAGDKEQGADAWGRNMAGASTEKEERADPWGGKTVLGDSSHSDTAFGSWVKVSSTS 1245
              S +  ++E+GA  WG ++AGAST+KE+ ADPWG K    +S+HSD AF SWVK SSTS
Sbjct: 1318 GKSWNQKEQERGAGPWGSSVAGASTDKEQNADPWGSKATPSESNHSDKAFDSWVKASSTS 1377

Query: 1246 GEHNS-WNKSEGGGFE-KDGDGWNKPCVKTTPPT---AKADDKQGADPWGSKVSVTARDD 1410
            GE NS W K+ GGG   KDGDGWNK   KT   T      D  +GA  W S    ++RD 
Sbjct: 1378 GERNSLWAKTTGGGGSGKDGDGWNKSSTKTISSTLGMISPDQGEGAATWASG---SSRDK 1434

Query: 1411 TQGADPWGSKPSLPAEADKGGADPWASKRAVGARADKGGADPWASKRAVGAR-ELEQGDD 1587
            TQGADPWGSK S PA  DKG ADPW  K A  AR    GAD W SK A  +R + EQ  D
Sbjct: 1435 TQGADPWGSKAS-PAAKDKGEADPWGGKLAASARDPGQGADAWGSKAAAPSRADKEQKAD 1493

Query: 1588 PWGNKMA 1608
             WG+K A
Sbjct: 1494 AWGSKAA 1500



 Score =  124 bits (310), Expect = 7e-26
 Identities = 89/277 (32%), Positives = 122/277 (44%), Gaps = 17/277 (6%)
 Frame = +1

Query: 817  SGNGEQTVVTSSWDGASSS------WQALSTSTLFGNNNDQKTEQEQGADPWGSHASIVA 978
            S +GE+  + +   G   S      W   ST T+         +Q +GA  W S +S   
Sbjct: 1375 STSGERNSLWAKTTGGGGSGKDGDGWNKSSTKTISSTLGMISPDQGEGAATWASGSS--R 1432

Query: 979  GDHEGSDPWGSKLVPVATDTEQGADPWGSKASISAGDKEQGADAWGRNMAGAS-TEKEER 1155
               +G+DPWGSK  P A D  + ADPWG K + SA D  QGADAWG   A  S  +KE++
Sbjct: 1433 DKTQGADPWGSKASPAAKDKGE-ADPWGGKLAASARDPGQGADAWGSKAAAPSRADKEQK 1491

Query: 1156 ADPWGGKTVLGDSSHSDTAFGSWVKVSSTSGEHNSWNKSEGGGFEKDGDGWNKPCVKTTP 1335
            AD WG K   GDSS++               +++ WNK  G G  KDGDGW+K    +T 
Sbjct: 1492 ADAWGSKAAPGDSSNN---------------QNSPWNKVAGEGSGKDGDGWSKAATYST- 1535

Query: 1336 PTAKADDKQGADPWGSKVSVTARDDTQ-----GADPWGS--KPSLPAEADKGGAD---PW 1485
                   K GAD W    S  +   +        D W S  KP +  +  +  +    P 
Sbjct: 1536 -------KNGADGWDKPKSFGSNQASNWKKEGNEDAWNSSNKPKVEGQGSEPSSSWEKPK 1588

Query: 1486 ASKRAVGARADKGGADPWASKRAVGARELEQGDDPWG 1596
             S  A    + K G + W +     A +  +G D WG
Sbjct: 1589 VSTGATWGSSSKNGTNEWNNGGNEDAWKKPRGSD-WG 1624



 Score = 99.4 bits (246), Expect = 6e-18
 Identities = 80/280 (28%), Positives = 120/280 (42%), Gaps = 30/280 (10%)
 Frame = +1

Query: 844  TSSWDGASSSWQALSTSTLFGNNNDQKTEQ---EQGADPWG--SHASIVAGDHEGSDPWG 1008
            +S  D    SW   ST++   N+   KTE    E+  D W   S +S  +G   G+D W 
Sbjct: 805  SSHSDKTFDSWAKASTASGEENSVWNKTEGVGCEKDGDGWNKPSASSSFSGRERGADQWE 864

Query: 1009 SKLVPVATDTEQGADPWGSKASISAGD------------------KEQGADAWGRNMAGA 1134
            SK+   A D  +G D WGSKAS++  D                  + QG D W  N+A A
Sbjct: 865  SKVPAAAKDHARGVDAWGSKASVANKDQGGEDPWASKVTAGVRAEQGQGTDPWVSNVAVA 924

Query: 1135 STEKEERADPWGGKTVLGDSSHSDTAFGSWVKVSSTSGEHNSWNKSEGGGFEKDGDGWNK 1314
            + +KE++ D W  K  L  +S  D              +++SW+K+ GGG  +DGD W+K
Sbjct: 925  TRDKEQKFDTWSSKAALAPNSVGD--------------QNSSWDKAAGGGSGEDGDSWSK 970

Query: 1315 PCVKTTPPTAKADDKQGADPWGSKVSVTARDDTQGADPWGSKPSL--PAEADKGGADPWA 1488
            P  K    T  A +   +  W      TA   T+ A+    +PS    A+    G   W 
Sbjct: 971  PSCK---GTTVAVNNSSSSSW-----ETAAIGTKSAEKQEGEPSSWDKAKVSSDGQSGW- 1021

Query: 1489 SKRAVGARADKGGADPWASKRAVGARELEQ-----GDDPW 1593
               A G+ + K   D W + ++ G  ++        +D W
Sbjct: 1022 -DMAAGS-SIKNNTDGWNNPKSSGGDQVSNWKMGGNEDAW 1059



 Score = 72.4 bits (176), Expect = 2e-09
 Identities = 89/347 (25%), Positives = 128/347 (36%), Gaps = 73/347 (21%)
 Frame = +1

Query: 799  RFTGGLSGNGEQTVVTSSWDGASSSWQALSTSTLFGNNNDQKTEQEQGAD---PWGS--- 960
            R+ G  + + E    +S + G   S +        G  +  +  +E   D    WGS   
Sbjct: 1140 RYGGRGNRDEENQDGSSEFGGGRGSGRGRGRGRYGGRGSRDEDNKEGSGDFGGGWGSGRG 1199

Query: 961  -----HASIVAGDHEGSDPWGSKLVPVATDTEQGADPWGSKASISAGDKEQGADAWGRNM 1125
                 +    AGD E  D  GS  +   +   +G   WG      AGD +   D  G   
Sbjct: 1200 RGRGWYGGRSAGDGENQD--GSGDLGWGSGRGRG---WGRYGGRGAGDGDN-QDRQGDYG 1253

Query: 1126 AGASTEKEERADPWGGKTVLGDSSHSDTAFGSWVKV--------SSTSGEHNSWNKSEGG 1281
             G  + +      +G +   G+  + D   GSW           S T+ E N     E G
Sbjct: 1254 GGWESGRGGGRGRYGERGGTGNEDNQDRTGGSWGSGRGRGQWGGSGTATEENQDKSGEFG 1313

Query: 1282 GFEKDGDGWNKPCVKTTPPTAKADDKQGADPWGSKVSVTARDDTQGADPWGSK--PSLPA 1455
            G+   G  WN+            + ++GA PWGS V+  + D  Q ADPWGSK  PS   
Sbjct: 1314 GWGS-GKSWNQK-----------EQERGAGPWGSSVAGASTDKEQNADPWGSKATPSESN 1361

Query: 1456 EADK-------------------------GGA----DPW--------------------- 1485
             +DK                         GG+    D W                     
Sbjct: 1362 HSDKAFDSWVKASSTSGERNSLWAKTTGGGGSGKDGDGWNKSSTKTISSTLGMISPDQGE 1421

Query: 1486 -ASKRAVGARADKG-GADPWASKRAVGARELEQGDDPWGNKMAATSR 1620
             A+  A G+  DK  GADPW SK +  A++  +  DPWG K+AA++R
Sbjct: 1422 GAATWASGSSRDKTQGADPWGSKASPAAKDKGEA-DPWGGKLAASAR 1467


>ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X3 [Elaeis
            guineensis]
          Length = 2067

 Score =  367 bits (941), Expect = e-108
 Identities = 247/589 (41%), Positives = 315/589 (53%), Gaps = 57/589 (9%)
 Frame = +1

Query: 1    EEDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXX 180
            +ED++W+S+VY  R KM+ SEAAD K  ++ GNGF LHD VLFG K FGV          
Sbjct: 377  DEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFR 436

Query: 181  XXXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRH 360
                  EG EV+T+K +DIK  CVDKMFTASDR+ KTI INDTVKVL+GPL+ R+G+VRH
Sbjct: 437  ILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRH 496

Query: 361  MYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQE 540
            MYKGTLFIYDEN+ ENSG FCAKS  CEN+   K       G KSS SF Q P+RS E++
Sbjct: 497  MYKGTLFIYDENETENSGFFCAKSASCENLKELK-------GEKSSHSFFQPPMRSSEEQ 549

Query: 541  DSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVE 720
            D S+ F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVKLDSLVKVITVE
Sbjct: 550  DRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKLDSLVKVITVE 609

Query: 721  EQFLSIPNIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDGA-----SSSWQAL 885
             ++LS+PN+KRD +A   ++ FGTQE    GLS  G Q V    WD +       SWQA 
Sbjct: 610  AEYLSVPNVKRDDSAATTSNTFGTQE----GLSIAG-QHVDNGQWDASVPSFGRGSWQAF 664

Query: 886  STSTLFG-NNNDQKTEQEQGADPWGSHASIVAG-------DHEGSDPWGSKLVPVA-TDT 1038
              S     +NND K+++   ADPWGS   +++G         +  D WG         D+
Sbjct: 665  PGSNSSDVDNNDHKSDEGHDADPWGS--KVLSGARADAWHSSKAMDGWGKAAGSSGEQDS 722

Query: 1039 EQGADPWGSKASISAGDKEQGADAW-GRNMAGASTEKEERADPWGGKTVLGDSSHSDTAF 1215
            +      G K +  A +  + AD W G+ +A  STE +E   P    +  G     D  F
Sbjct: 723  QWNMTAAGDKVTDQARNCIEDADGWNGKALAKTSTEIDESKKPKPQSSDAGGWGRGD--F 780

Query: 1216 GSWVKVSSTSGEHNSWNKSEG---GGFEKDGD---GWNKPCVKT--------------TP 1335
            GS   +  T     +W+K      G   K+ D   GW++                   T 
Sbjct: 781  GSGNNLDPTENVSGNWDKQRDDDLGDSRKNSDGVSGWDRAATSKDKGKDLSWDQSNNWTH 840

Query: 1336 PTAKADDKQGADPWGSKVSVTARDDTQGA----------DPWGS--------KPSLPAEA 1461
            P   + DK        K  ++  DD+ G           + WG         K    A +
Sbjct: 841  PEVVSIDKASCWDVKGKGIISNEDDSWGKAARFREKNTNEDWGKFSVGSSQIKEKDTARS 900

Query: 1462 DKG-GADPW--ASKRAVGARADKGGADPWASKRAVGARELEQGD-DPWG 1596
            D G  AD W  A+     +    GG     S+    AR+L  G  D WG
Sbjct: 901  DGGEQADRWDAAASNCTQSSVQHGG----QSRSWDKARDLHVGRLDNWG 945


>ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Elaeis
            guineensis]
          Length = 2069

 Score =  367 bits (941), Expect = e-108
 Identities = 247/589 (41%), Positives = 315/589 (53%), Gaps = 57/589 (9%)
 Frame = +1

Query: 1    EEDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXX 180
            +ED++W+S+VY  R KM+ SEAAD K  ++ GNGF LHD VLFG K FGV          
Sbjct: 379  DEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFR 438

Query: 181  XXXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRH 360
                  EG EV+T+K +DIK  CVDKMFTASDR+ KTI INDTVKVL+GPL+ R+G+VRH
Sbjct: 439  ILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRH 498

Query: 361  MYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQE 540
            MYKGTLFIYDEN+ ENSG FCAKS  CEN+   K       G KSS SF Q P+RS E++
Sbjct: 499  MYKGTLFIYDENETENSGFFCAKSASCENLKELK-------GEKSSHSFFQPPMRSSEEQ 551

Query: 541  DSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVE 720
            D S+ F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVKLDSLVKVITVE
Sbjct: 552  DRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKLDSLVKVITVE 611

Query: 721  EQFLSIPNIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDGA-----SSSWQAL 885
             ++LS+PN+KRD +A   ++ FGTQE    GLS  G Q V    WD +       SWQA 
Sbjct: 612  AEYLSVPNVKRDDSAATTSNTFGTQE----GLSIAG-QHVDNGQWDASVPSFGRGSWQAF 666

Query: 886  STSTLFG-NNNDQKTEQEQGADPWGSHASIVAG-------DHEGSDPWGSKLVPVA-TDT 1038
              S     +NND K+++   ADPWGS   +++G         +  D WG         D+
Sbjct: 667  PGSNSSDVDNNDHKSDEGHDADPWGS--KVLSGARADAWHSSKAMDGWGKAAGSSGEQDS 724

Query: 1039 EQGADPWGSKASISAGDKEQGADAW-GRNMAGASTEKEERADPWGGKTVLGDSSHSDTAF 1215
            +      G K +  A +  + AD W G+ +A  STE +E   P    +  G     D  F
Sbjct: 725  QWNMTAAGDKVTDQARNCIEDADGWNGKALAKTSTEIDESKKPKPQSSDAGGWGRGD--F 782

Query: 1216 GSWVKVSSTSGEHNSWNKSEG---GGFEKDGD---GWNKPCVKT--------------TP 1335
            GS   +  T     +W+K      G   K+ D   GW++                   T 
Sbjct: 783  GSGNNLDPTENVSGNWDKQRDDDLGDSRKNSDGVSGWDRAATSKDKGKDLSWDQSNNWTH 842

Query: 1336 PTAKADDKQGADPWGSKVSVTARDDTQGA----------DPWGS--------KPSLPAEA 1461
            P   + DK        K  ++  DD+ G           + WG         K    A +
Sbjct: 843  PEVVSIDKASCWDVKGKGIISNEDDSWGKAARFREKNTNEDWGKFSVGSSQIKEKDTARS 902

Query: 1462 DKG-GADPW--ASKRAVGARADKGGADPWASKRAVGARELEQGD-DPWG 1596
            D G  AD W  A+     +    GG     S+    AR+L  G  D WG
Sbjct: 903  DGGEQADRWDAAASNCTQSSVQHGG----QSRSWDKARDLHVGRLDNWG 947


>ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X4 [Elaeis
            guineensis]
          Length = 2066

 Score =  365 bits (938), Expect = e-108
 Identities = 244/589 (41%), Positives = 313/589 (53%), Gaps = 57/589 (9%)
 Frame = +1

Query: 1    EEDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXX 180
            +ED++W+S+VY  R KM+ SEAAD K  ++ GNGF LHD VLFG K FGV          
Sbjct: 377  DEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFR 436

Query: 181  XXXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRH 360
                  EG EV+T+K +DIK  CVDKMFTASDR+ KTI INDTVKVL+GPL+ R+G+VRH
Sbjct: 437  ILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRH 496

Query: 361  MYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQE 540
            MYKGTLFIYDEN+ ENSG FCAKS  CEN+   K       G KSS SF Q P+RS E++
Sbjct: 497  MYKGTLFIYDENETENSGFFCAKSASCENLKELK-------GEKSSHSFFQPPMRSSEEQ 549

Query: 541  DSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVE 720
            D S+ F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVKLDSLVKVITVE
Sbjct: 550  DRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKLDSLVKVITVE 609

Query: 721  EQFLSIPNIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDGA-----SSSWQAL 885
             ++LS+PN+KRD +A   ++ FGTQE  + G      Q V    WD +       SWQA 
Sbjct: 610  AEYLSVPNVKRDDSAATTSNTFGTQEGLSIG------QHVDNGQWDASVPSFGRGSWQAF 663

Query: 886  STSTLFG-NNNDQKTEQEQGADPWGSHASIVAG-------DHEGSDPWGSKLVPVA-TDT 1038
              S     +NND K+++   ADPWGS   +++G         +  D WG         D+
Sbjct: 664  PGSNSSDVDNNDHKSDEGHDADPWGS--KVLSGARADAWHSSKAMDGWGKAAGSSGEQDS 721

Query: 1039 EQGADPWGSKASISAGDKEQGADAW-GRNMAGASTEKEERADPWGGKTVLGDSSHSDTAF 1215
            +      G K +  A +  + AD W G+ +A  STE +E   P    +  G     D  F
Sbjct: 722  QWNMTAAGDKVTDQARNCIEDADGWNGKALAKTSTEIDESKKPKPQSSDAGGWGRGD--F 779

Query: 1216 GSWVKVSSTSGEHNSWNKSEG---GGFEKDGD---GWNKPCVKT--------------TP 1335
            GS   +  T     +W+K      G   K+ D   GW++                   T 
Sbjct: 780  GSGNNLDPTENVSGNWDKQRDDDLGDSRKNSDGVSGWDRAATSKDKGKDLSWDQSNNWTH 839

Query: 1336 PTAKADDKQGADPWGSKVSVTARDDTQGA----------DPWGS--------KPSLPAEA 1461
            P   + DK        K  ++  DD+ G           + WG         K    A +
Sbjct: 840  PEVVSIDKASCWDVKGKGIISNEDDSWGKAARFREKNTNEDWGKFSVGSSQIKEKDTARS 899

Query: 1462 DKG-GADPW--ASKRAVGARADKGGADPWASKRAVGARELEQGD-DPWG 1596
            D G  AD W  A+     +    GG     S+    AR+L  G  D WG
Sbjct: 900  DGGEQADRWDAAASNCTQSSVQHGG----QSRSWDKARDLHVGRLDNWG 944


>ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Elaeis
            guineensis]
          Length = 2068

 Score =  365 bits (938), Expect = e-108
 Identities = 244/589 (41%), Positives = 313/589 (53%), Gaps = 57/589 (9%)
 Frame = +1

Query: 1    EEDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXX 180
            +ED++W+S+VY  R KM+ SEAAD K  ++ GNGF LHD VLFG K FGV          
Sbjct: 379  DEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFR 438

Query: 181  XXXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRH 360
                  EG EV+T+K +DIK  CVDKMFTASDR+ KTI INDTVKVL+GPL+ R+G+VRH
Sbjct: 439  ILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRH 498

Query: 361  MYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQE 540
            MYKGTLFIYDEN+ ENSG FCAKS  CEN+   K       G KSS SF Q P+RS E++
Sbjct: 499  MYKGTLFIYDENETENSGFFCAKSASCENLKELK-------GEKSSHSFFQPPMRSSEEQ 551

Query: 541  DSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVE 720
            D S+ F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVKLDSLVKVITVE
Sbjct: 552  DRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKLDSLVKVITVE 611

Query: 721  EQFLSIPNIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDGA-----SSSWQAL 885
             ++LS+PN+KRD +A   ++ FGTQE  + G      Q V    WD +       SWQA 
Sbjct: 612  AEYLSVPNVKRDDSAATTSNTFGTQEGLSIG------QHVDNGQWDASVPSFGRGSWQAF 665

Query: 886  STSTLFG-NNNDQKTEQEQGADPWGSHASIVAG-------DHEGSDPWGSKLVPVA-TDT 1038
              S     +NND K+++   ADPWGS   +++G         +  D WG         D+
Sbjct: 666  PGSNSSDVDNNDHKSDEGHDADPWGS--KVLSGARADAWHSSKAMDGWGKAAGSSGEQDS 723

Query: 1039 EQGADPWGSKASISAGDKEQGADAW-GRNMAGASTEKEERADPWGGKTVLGDSSHSDTAF 1215
            +      G K +  A +  + AD W G+ +A  STE +E   P    +  G     D  F
Sbjct: 724  QWNMTAAGDKVTDQARNCIEDADGWNGKALAKTSTEIDESKKPKPQSSDAGGWGRGD--F 781

Query: 1216 GSWVKVSSTSGEHNSWNKSEG---GGFEKDGD---GWNKPCVKT--------------TP 1335
            GS   +  T     +W+K      G   K+ D   GW++                   T 
Sbjct: 782  GSGNNLDPTENVSGNWDKQRDDDLGDSRKNSDGVSGWDRAATSKDKGKDLSWDQSNNWTH 841

Query: 1336 PTAKADDKQGADPWGSKVSVTARDDTQGA----------DPWGS--------KPSLPAEA 1461
            P   + DK        K  ++  DD+ G           + WG         K    A +
Sbjct: 842  PEVVSIDKASCWDVKGKGIISNEDDSWGKAARFREKNTNEDWGKFSVGSSQIKEKDTARS 901

Query: 1462 DKG-GADPW--ASKRAVGARADKGGADPWASKRAVGARELEQGD-DPWG 1596
            D G  AD W  A+     +    GG     S+    AR+L  G  D WG
Sbjct: 902  DGGEQADRWDAAASNCTQSSVQHGG----QSRSWDKARDLHVGRLDNWG 946


>ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylation 3 [Phoenix
            dactylifera]
          Length = 2039

 Score =  361 bits (926), Expect = e-106
 Identities = 231/545 (42%), Positives = 306/545 (56%), Gaps = 7/545 (1%)
 Frame = +1

Query: 1    EEDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXX 180
            +E ++W+S+VY+ R KM+ +EAAD +  ++ GNGF LHD VLFG K FGV          
Sbjct: 375  DEHLNWVSSVYHGRNKMRPTEAADQQVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFR 434

Query: 181  XXXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRH 360
                  EG EV+T+K +DIK  CVDKMFTASDR+ KTI INDTVKVL+GPL+ ++G+V+H
Sbjct: 435  ILKGGVEGPEVVTVKIQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDKQGIVKH 494

Query: 361  MYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQE 540
            MYKGTLFIYDEN+ ENSG FCAKS  CEN+   K       G KSS SF+Q+P+ S E++
Sbjct: 495  MYKGTLFIYDENETENSGFFCAKSASCENMKESK-------GEKSSHSFSQAPMGSYEEQ 547

Query: 541  DSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVE 720
            D S+ F+  R +E +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVK+DSLVK+ITVE
Sbjct: 548  DRSHGFNWRRQTERDQVFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKVDSLVKIITVE 607

Query: 721  EQFLSIPNIKRDFAAEMPTDIFGTQERFT-GGLSGNGEQTVVTSSWDGASSSWQALSTST 897
             ++LS+PN+KRD +A   ++ FGTQER + G  + NG+  V   S+     SWQA   S 
Sbjct: 608  AEYLSVPNVKRDDSAATTSNPFGTQERLSIGQHAENGQWDVGVPSF--GRDSWQAFPASN 665

Query: 898  LFG-NNNDQKTEQEQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQGADPWGSKAS 1074
                +NN  K ++   ADPWGS   +++G    +D W S          +  D WG KA+
Sbjct: 666  FSDVDNNGHKADEGHDADPWGS--KVISGAR--ADAWHS---------SKAMDGWG-KAA 711

Query: 1075 ISAGDKEQGADAWGRNMAGASTEKEER-----ADPWGGKTVLGDSSHSDTAFGSWVKVSS 1239
             S+G+++     W    AG     + R     AD W GK +   S+  D +     K   
Sbjct: 712  SSSGEQD---SQWNMTAAGEKVTDQARNCIEDADGWNGKALAKTSTEIDGS----KKSKP 764

Query: 1240 TSGEHNSWNKSEGGGFEKDGDGWNKPCVKTTPPTAKADDKQGADPWGSKVSVTARDDTQG 1419
             SG    W +   G F   G G N   +  +       DKQ AD  G  +      ++ G
Sbjct: 765  QSGGDGGWGR---GNF---GSGNN---LDPSENVTGNWDKQRADNLGDSLK-----NSDG 810

Query: 1420 ADPWGSKPSLPAEADKGGADPWASKRAVGARADKGGADPWASKRAVGARELEQGDDPWGN 1599
               W    +     DKG    W  +     R +    D  +S    G   +   DD WG 
Sbjct: 811  VSGWDRAAT---SKDKGKDLSW-DRSNNWTRPEVVSNDKVSSWDVKGKAIISNEDDSWG- 865

Query: 1600 KMAAT 1614
            K A+T
Sbjct: 866  KAAST 870


>ref|XP_020091607.1| protein RNA-directed DNA methylation 3 isoform X5 [Ananas comosus]
          Length = 1429

 Score =  338 bits (867), Expect = 2e-99
 Identities = 228/576 (39%), Positives = 303/576 (52%), Gaps = 37/576 (6%)
 Frame = +1

Query: 4    EDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXX 183
            ED+ W+S+VY+ RKK++ ++ +D+   +   N + LHDLVLFG+K FGV           
Sbjct: 89   EDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRI 148

Query: 184  XXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHM 363
                 EG  V+T++ +DIK  CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+
Sbjct: 149  LKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHL 208

Query: 364  YKGTLFIYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG--GNKSSSSFNQSPVRSC 531
            Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S  SF     G+ S+S F++ P  S 
Sbjct: 209  YRGSIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLQGDGSASLFSEPPTISF 268

Query: 532  EQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVI 711
            E +DSS    R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+I
Sbjct: 269  ENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKII 328

Query: 712  TVEEQFLSIPNIKRDFAAEMPTDIFGTQER-FTGGLSGNG-EQTVVTSSWDG-----ASS 870
            TV+ +FLS+P  KRD +    +D+FGTQE    G  S +G E     SSWD       S 
Sbjct: 329  TVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADGTESQPGRSSWDSPLPSFGSD 388

Query: 871  SWQALSTSTL-FGNNNDQKTEQEQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQG 1047
             WQ  S S L    N D KT+     DPWGS         + +D W +   P        
Sbjct: 389  GWQPFSASKLSAAGNTDNKTDD---VDPWGSKVK----SDQSADTWANAAAPSGDQNSS- 440

Query: 1048 ADPWGSKASISAGDKEQGADAWGRNMAGASTEKEERADPWGG-----KTVLGDSSHSDTA 1212
               W    + +A  +   AD W  N    S +  +++    G     KT+  DS  S   
Sbjct: 441  ---WDKSTTNAASGQ---ADTWQNNSNDWSNKGSQKSTSDAGGWEKEKTLASDSGGS--- 491

Query: 1213 FGSWVKVS----STSGEHNSWNKSEGGGFEKDGDGWNKP--CVKTTPPTAKADDKQGADP 1374
            +G+  K+S    S +G  N+W+K+     +  G  WN+P    K+   T+K D       
Sbjct: 492  WGTGNKISNLDNSKTGGDNAWDKASNDKDKGKGSSWNEPNNWTKSEAVTSKTDS------ 545

Query: 1375 WGSKVSVTARDDTQGADPWG---SKPSLPAEAD-----KGGA------DPWASKRAVGAR 1512
            W  K    A DD    D WG    K  +  E D     KG        D W   +A G  
Sbjct: 546  WDVKGKAIAMDD---GDTWGKAKGKGIVINEDDSWDKAKGKGIVIKEDDSWG--KATGKG 600

Query: 1513 ADKGGADPWASKRAVGARELEQGDDPWGNKMAATSR 1620
                  D W   +  G    E  DDPWG   AAT++
Sbjct: 601  IVINDDDTWGKAKGKGIEMNE--DDPWGR--AATNQ 632


>ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isoform X3 [Ananas comosus]
          Length = 1714

 Score =  338 bits (868), Expect = 5e-99
 Identities = 228/575 (39%), Positives = 303/575 (52%), Gaps = 36/575 (6%)
 Frame = +1

Query: 4    EDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXX 183
            ED+ W+S+VY+ RKK++ ++ +D+   +   N + LHDLVLFG+K FGV           
Sbjct: 375  EDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRI 434

Query: 184  XXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHM 363
                 EG  V+T++ +DIK  CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+
Sbjct: 435  LKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHL 494

Query: 364  YKGTLFIYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG-GNKSSSSFNQSPVRSCE 534
            Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S  SF    G+ S+S F++ P  S E
Sbjct: 495  YRGSIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLGDGSASLFSEPPTISFE 554

Query: 535  QEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVIT 714
             +DSS    R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+IT
Sbjct: 555  NQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKIIT 614

Query: 715  VEEQFLSIPNIKRDFAAEMPTDIFGTQER-FTGGLSGNG-EQTVVTSSWDG-----ASSS 873
            V+ +FLS+P  KRD +    +D+FGTQE    G  S +G E     SSWD       S  
Sbjct: 615  VDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADGTESQPGRSSWDSPLPSFGSDG 674

Query: 874  WQALSTSTL-FGNNNDQKTEQEQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQGA 1050
            WQ  S S L    N D KT+     DPWGS         + +D W +   P         
Sbjct: 675  WQPFSASKLSAAGNTDNKTDD---VDPWGSKVK----SDQSADTWANAAAPSGDQNSS-- 725

Query: 1051 DPWGSKASISAGDKEQGADAWGRNMAGASTEKEERADPWGG-----KTVLGDSSHSDTAF 1215
              W    + +A  +   AD W  N    S +  +++    G     KT+  DS  S   +
Sbjct: 726  --WDKSTTNAASGQ---ADTWQNNSNDWSNKGSQKSTSDAGGWEKEKTLASDSGGS---W 777

Query: 1216 GSWVKVS----STSGEHNSWNKSEGGGFEKDGDGWNKP--CVKTTPPTAKADDKQGADPW 1377
            G+  K+S    S +G  N+W+K+     +  G  WN+P    K+   T+K D       W
Sbjct: 778  GTGNKISNLDNSKTGGDNAWDKASNDKDKGKGSSWNEPNNWTKSEAVTSKTDS------W 831

Query: 1378 GSKVSVTARDDTQGADPWG---SKPSLPAEAD-----KGGA------DPWASKRAVGARA 1515
              K    A DD    D WG    K  +  E D     KG        D W   +A G   
Sbjct: 832  DVKGKAIAMDD---GDTWGKAKGKGIVINEDDSWDKAKGKGIVIKEDDSWG--KATGKGI 886

Query: 1516 DKGGADPWASKRAVGARELEQGDDPWGNKMAATSR 1620
                 D W   +  G    E  DDPWG   AAT++
Sbjct: 887  VINDDDTWGKAKGKGIEMNE--DDPWGR--AATNQ 917


>ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isoform X4 [Ananas comosus]
          Length = 1705

 Score =  338 bits (867), Expect = 7e-99
 Identities = 228/576 (39%), Positives = 303/576 (52%), Gaps = 37/576 (6%)
 Frame = +1

Query: 4    EDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXX 183
            ED+ W+S+VY+ RKK++ ++ +D+   +   N + LHDLVLFG+K FGV           
Sbjct: 375  EDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRI 434

Query: 184  XXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHM 363
                 EG  V+T++ +DIK  CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+
Sbjct: 435  LKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHL 494

Query: 364  YKGTLFIYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG--GNKSSSSFNQSPVRSC 531
            Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S  SF     G+ S+S F++ P  S 
Sbjct: 495  YRGSIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLQGDGSASLFSEPPTISF 554

Query: 532  EQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVI 711
            E +DSS    R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+I
Sbjct: 555  ENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKII 614

Query: 712  TVEEQFLSIPNIKRDFAAEMPTDIFGTQER-FTGGLSGNG-EQTVVTSSWDG-----ASS 870
            TV+ +FLS+P  KRD +    +D+FGTQE    G  S +G E     SSWD       S 
Sbjct: 615  TVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADGTESQPGRSSWDSPLPSFGSD 674

Query: 871  SWQALSTSTL-FGNNNDQKTEQEQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQG 1047
             WQ  S S L    N D KT+     DPWGS         + +D W +   P        
Sbjct: 675  GWQPFSASKLSAAGNTDNKTDD---VDPWGSKVK----SDQSADTWANAAAPSGDQNSS- 726

Query: 1048 ADPWGSKASISAGDKEQGADAWGRNMAGASTEKEERADPWGG-----KTVLGDSSHSDTA 1212
               W    + +A  +   AD W  N    S +  +++    G     KT+  DS  S   
Sbjct: 727  ---WDKSTTNAASGQ---ADTWQNNSNDWSNKGSQKSTSDAGGWEKEKTLASDSGGS--- 777

Query: 1213 FGSWVKVS----STSGEHNSWNKSEGGGFEKDGDGWNKP--CVKTTPPTAKADDKQGADP 1374
            +G+  K+S    S +G  N+W+K+     +  G  WN+P    K+   T+K D       
Sbjct: 778  WGTGNKISNLDNSKTGGDNAWDKASNDKDKGKGSSWNEPNNWTKSEAVTSKTDS------ 831

Query: 1375 WGSKVSVTARDDTQGADPWG---SKPSLPAEAD-----KGGA------DPWASKRAVGAR 1512
            W  K    A DD    D WG    K  +  E D     KG        D W   +A G  
Sbjct: 832  WDVKGKAIAMDD---GDTWGKAKGKGIVINEDDSWDKAKGKGIVIKEDDSWG--KATGKG 886

Query: 1513 ADKGGADPWASKRAVGARELEQGDDPWGNKMAATSR 1620
                  D W   +  G    E  DDPWG   AAT++
Sbjct: 887  IVINDDDTWGKAKGKGIEMNE--DDPWGR--AATNQ 918


>ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isoform X2 [Ananas comosus]
          Length = 1714

 Score =  338 bits (867), Expect = 7e-99
 Identities = 228/576 (39%), Positives = 303/576 (52%), Gaps = 37/576 (6%)
 Frame = +1

Query: 4    EDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXX 183
            ED+ W+S+VY+ RKK++ ++ +D+   +   N + LHDLVLFG+K FGV           
Sbjct: 375  EDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRI 434

Query: 184  XXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHM 363
                 EG  V+T++ +DIK  CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+
Sbjct: 435  LKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHL 494

Query: 364  YKGTLFIYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG--GNKSSSSFNQSPVRSC 531
            Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S  SF     G+ S+S F++ P  S 
Sbjct: 495  YRGSIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLQGDGSASLFSEPPTISF 554

Query: 532  EQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVI 711
            E +DSS    R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+I
Sbjct: 555  ENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKII 614

Query: 712  TVEEQFLSIPNIKRDFAAEMPTDIFGTQER-FTGGLSGNG-EQTVVTSSWDG-----ASS 870
            TV+ +FLS+P  KRD +    +D+FGTQE    G  S +G E     SSWD       S 
Sbjct: 615  TVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADGTESQPGRSSWDSPLPSFGSD 674

Query: 871  SWQALSTSTL-FGNNNDQKTEQEQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQG 1047
             WQ  S S L    N D KT+     DPWGS         + +D W +   P        
Sbjct: 675  GWQPFSASKLSAAGNTDNKTDD---VDPWGSKVK----SDQSADTWANAAAPSGDQNSS- 726

Query: 1048 ADPWGSKASISAGDKEQGADAWGRNMAGASTEKEERADPWGG-----KTVLGDSSHSDTA 1212
               W    + +A  +   AD W  N    S +  +++    G     KT+  DS  S   
Sbjct: 727  ---WDKSTTNAASGQ---ADTWQNNSNDWSNKGSQKSTSDAGGWEKEKTLASDSGGS--- 777

Query: 1213 FGSWVKVS----STSGEHNSWNKSEGGGFEKDGDGWNKP--CVKTTPPTAKADDKQGADP 1374
            +G+  K+S    S +G  N+W+K+     +  G  WN+P    K+   T+K D       
Sbjct: 778  WGTGNKISNLDNSKTGGDNAWDKASNDKDKGKGSSWNEPNNWTKSEAVTSKTDS------ 831

Query: 1375 WGSKVSVTARDDTQGADPWG---SKPSLPAEAD-----KGGA------DPWASKRAVGAR 1512
            W  K    A DD    D WG    K  +  E D     KG        D W   +A G  
Sbjct: 832  WDVKGKAIAMDD---GDTWGKAKGKGIVINEDDSWDKAKGKGIVIKEDDSWG--KATGKG 886

Query: 1513 ADKGGADPWASKRAVGARELEQGDDPWGNKMAATSR 1620
                  D W   +  G    E  DDPWG   AAT++
Sbjct: 887  IVINDDDTWGKAKGKGIEMNE--DDPWGR--AATNQ 918


>ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isoform X1 [Ananas comosus]
          Length = 1715

 Score =  338 bits (867), Expect = 7e-99
 Identities = 228/576 (39%), Positives = 303/576 (52%), Gaps = 37/576 (6%)
 Frame = +1

Query: 4    EDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXX 183
            ED+ W+S+VY+ RKK++ ++ +D+   +   N + LHDLVLFG+K FGV           
Sbjct: 375  EDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRI 434

Query: 184  XXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHM 363
                 EG  V+T++ +DIK  CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+
Sbjct: 435  LKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHL 494

Query: 364  YKGTLFIYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG--GNKSSSSFNQSPVRSC 531
            Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S  SF     G+ S+S F++ P  S 
Sbjct: 495  YRGSIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLQGDGSASLFSEPPTISF 554

Query: 532  EQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVI 711
            E +DSS    R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+I
Sbjct: 555  ENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKII 614

Query: 712  TVEEQFLSIPNIKRDFAAEMPTDIFGTQER-FTGGLSGNG-EQTVVTSSWDG-----ASS 870
            TV+ +FLS+P  KRD +    +D+FGTQE    G  S +G E     SSWD       S 
Sbjct: 615  TVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADGTESQPGRSSWDSPLPSFGSD 674

Query: 871  SWQALSTSTL-FGNNNDQKTEQEQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQG 1047
             WQ  S S L    N D KT+     DPWGS         + +D W +   P        
Sbjct: 675  GWQPFSASKLSAAGNTDNKTDD---VDPWGSKVK----SDQSADTWANAAAPSGDQNSS- 726

Query: 1048 ADPWGSKASISAGDKEQGADAWGRNMAGASTEKEERADPWGG-----KTVLGDSSHSDTA 1212
               W    + +A  +   AD W  N    S +  +++    G     KT+  DS  S   
Sbjct: 727  ---WDKSTTNAASGQ---ADTWQNNSNDWSNKGSQKSTSDAGGWEKEKTLASDSGGS--- 777

Query: 1213 FGSWVKVS----STSGEHNSWNKSEGGGFEKDGDGWNKP--CVKTTPPTAKADDKQGADP 1374
            +G+  K+S    S +G  N+W+K+     +  G  WN+P    K+   T+K D       
Sbjct: 778  WGTGNKISNLDNSKTGGDNAWDKASNDKDKGKGSSWNEPNNWTKSEAVTSKTDS------ 831

Query: 1375 WGSKVSVTARDDTQGADPWG---SKPSLPAEAD-----KGGA------DPWASKRAVGAR 1512
            W  K    A DD    D WG    K  +  E D     KG        D W   +A G  
Sbjct: 832  WDVKGKAIAMDD---GDTWGKAKGKGIVINEDDSWDKAKGKGIVIKEDDSWG--KATGKG 886

Query: 1513 ADKGGADPWASKRAVGARELEQGDDPWGNKMAATSR 1620
                  D W   +  G    E  DDPWG   AAT++
Sbjct: 887  IVINDDDTWGKAKGKGIEMNE--DDPWGR--AATNQ 918


>gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas comosus]
          Length = 1701

 Score =  337 bits (865), Expect = 1e-98
 Identities = 228/575 (39%), Positives = 302/575 (52%), Gaps = 36/575 (6%)
 Frame = +1

Query: 4    EDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXX 183
            ED+ W+S+VY+ RKK++ ++ +D+   +   N + LHDLVLFG+K FGV           
Sbjct: 372  EDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRI 431

Query: 184  XXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHM 363
                 EG  V+T++ +DIK  CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+
Sbjct: 432  LKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHL 491

Query: 364  YKGTLFIYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG-GNKSSSSFNQSPVRSCE 534
            Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S  SF    G+ S+S F++ P  S E
Sbjct: 492  YRGSIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLGDGSASLFSEPPTISFE 551

Query: 535  QEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVIT 714
             +DSS    R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+IT
Sbjct: 552  NQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKIIT 611

Query: 715  VEEQFLSIPNIKRDFAAEMPTDIFGTQER-FTGGLSGNG-EQTVVTSSWDG-----ASSS 873
            V+ +FLS+P  KRD +    +D+FGTQE    G  S +G E     SSWD       S  
Sbjct: 612  VDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADGTESQPGRSSWDSPLPSFGSDG 671

Query: 874  WQALSTSTL-FGNNNDQKTEQEQGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQGA 1050
            WQ  S S L    N D KT+     DPWGS         + +D W +   P         
Sbjct: 672  WQPFSASKLSAAGNTDNKTDD---VDPWGSKVK----SDQSADTWANAAAPSGDQNSS-- 722

Query: 1051 DPWGSKASISAGDKEQGADAWGRNMAGASTEKEERADPWGG-----KTVLGDSSHSDTAF 1215
              W    + +A  +   AD W  N    S +  +++    G     KT+  DS  S   +
Sbjct: 723  --WDKSTTNAASGQ---ADTWQNNSNDWSNKGSQKSTSDAGGWEKEKTLASDSGGS---W 774

Query: 1216 GSWVKVS----STSGEHNSWNKSEGGGFEKDGDGWNKP--CVKTTPPTAKADDKQGADPW 1377
            G+  K S    S +G  N+W+K+     +  G  WN+P    K+   T+K D       W
Sbjct: 775  GTGNKTSNLDNSKTGGDNAWDKASNDKDKGKGSSWNEPNNWTKSEAVTSKTDS------W 828

Query: 1378 GSKVSVTARDDTQGADPWG---SKPSLPAEAD-----KGGA------DPWASKRAVGARA 1515
              K    A DD    D WG    K  +  E D     KG        D W   +A G   
Sbjct: 829  DVKGKAIAMDD---GDTWGKAKGKGIVINEDDSWDKAKGKGIVIKEDDSWG--KATGKGI 883

Query: 1516 DKGGADPWASKRAVGARELEQGDDPWGNKMAATSR 1620
                 D W   +  G    E  DDPWG   AAT++
Sbjct: 884  VINDDDTWGKAKGKGIEMNE--DDPWGR--AATNQ 914


>ref|XP_020587140.1| protein RNA-directed DNA methylation 3 [Phalaenopsis equestris]
          Length = 1960

 Score =  318 bits (816), Expect = 6e-92
 Identities = 221/576 (38%), Positives = 295/576 (51%), Gaps = 45/576 (7%)
 Frame = +1

Query: 4    EDVSWLSTVYNVRKK------------------------MKSSEAADSKGASELGNGFIL 111
            +DV WLS++Y  + K                         K+ E ++ K   +  NGF +
Sbjct: 380  KDVGWLSSIYKTQIKNKLPETSHQKNGEKSKQKNGEKSNRKNGEKSNQKDEDKQRNGFEI 439

Query: 112  HDLVLFGRKGFGVXXXXXXXXXXXXXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKT 291
             D VLFG+K  G+                   EV++I    IK +CVDK+FTA+DR  KT
Sbjct: 440  DDFVLFGKKDCGIIIDKENDVFKVLKGDANSSEVVSINIGVIKKNCVDKVFTATDRGMKT 499

Query: 292  IYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSS 471
            I+I+D VKV +GPLEGREG+V+HMYKG  FIYDE Q EN+G FCAKS++C+ +   +D  
Sbjct: 500  IFIDDVVKVSEGPLEGREGIVKHMYKGVFFIYDECQSENNGFFCAKSEICDLVKKSRDFG 559

Query: 472  FRKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCR 651
              K  + +  SF QSP+RS EQ+D+S +FSRN  S S   FS+GQTLRI KGPLKGYLCR
Sbjct: 560  GGKLSSNAGPSFAQSPIRSSEQDDNSQSFSRNHQSNSRGTFSVGQTLRICKGPLKGYLCR 619

Query: 652  VVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPTDIFGTQ-ERFTGGLSGNG 828
            V+RIYR+DVTVKLDSL K++TV+E+ LS PN KRD A  M  D+FG+Q E+  GGL  +G
Sbjct: 620  VIRIYRADVTVKLDSLGKLLTVDEKLLSFPNSKRDDATTMQCDMFGSQEEQPIGGLLDSG 679

Query: 829  EQTVVTSSWDGASSSWQALSTSTL-FGNNNDQKTEQEQGADPWGSHASIVAG--DHEGSD 999
                + +S  G   SW   S S   F  +ND K +Q   AD WGS  +   G  DH  ++
Sbjct: 680  GGFGMDNSSFG-RESWNTPSCSGFSFSRDNDCK-DQSAVADQWGSKPTFQDGDQDHGAAN 737

Query: 1000 PWGSKLVPVATDTEQGADPWGSKASISAGDKEQGADAWGRNMAGASTEKEERADPWGGKT 1179
             W     P ++  ++  +   S    +  D E  ADAW +    AS + E     W G T
Sbjct: 738  SWSK--APSSSAEQRSWNKMVSGEKGADADCENDADAWNK----ASNKGETSTGGWQGDT 791

Query: 1180 VL---GDSSHSDTAFGSWVKVSSTSGEHNS----WNKSEGGGFEK---DGDGWNKPCVKT 1329
             +   G +  +  A G       T+GE  S    W+K+     E      DGWN+   K 
Sbjct: 792  SVQKTGQTWSTKGASGGLDGAVHTAGEGVSAAGGWSKAAPDSREALTFGEDGWNRAASK- 850

Query: 1330 TPPTAKADDKQGADPWGSKVSVTARD-----DTQGADPWGSKPSLPAEADKGGADPWASK 1494
             P TA   D  G   W  +  + + D     + QGA    SK +    + K  +D +  K
Sbjct: 851  -PQTASNTDASG---W-EQTKLASSDAGGSWNAQGASAGWSKEA----SGKDKSDGFVGK 901

Query: 1495 RAVGARADKGG--ADPWASKRAVGARELEQGDDPWG 1596
                A    GG   D W  K   G   LE  DD WG
Sbjct: 902  SGNSASPKSGGDNLDSWGIK---GKASLENNDDGWG 934


>ref|XP_004961584.1| protein RNA-directed DNA methylation 3 [Setaria italica]
          Length = 1702

 Score =  318 bits (814), Expect = 1e-91
 Identities = 218/598 (36%), Positives = 297/598 (49%), Gaps = 62/598 (10%)
 Frame = +1

Query: 4    EDVSWLSTVYNVRK--------------KMKSSEAADSKGASEL---GNGFILHDLVLFG 132
            +D+ W+S++Y  +K              K KSS+A+ +  ++E     + F LHDLVLFG
Sbjct: 391  DDLDWVSSIYGPKKRNLPAERGIKSPSSKTKSSKASKASTSTENYDDNDEFNLHDLVLFG 450

Query: 133  RKGFGVXXXXXXXXXXXXXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTV 312
            RK FGV                EG  V T+K +DIK  CVDKMFTA DR +K I INDTV
Sbjct: 451  RKDFGVIIAIEKDGLRILKGGPEGSAV-TVKKQDIKKGCVDKMFTAVDRQKKIISINDTV 509

Query: 313  KVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNK 492
             VL+GP +G++GVV+H+Y GTLFIY+E++ EN G FCA+   CEN+   K+SS  +  + 
Sbjct: 510  NVLEGPFQGKQGVVKHLYMGTLFIYNESESENCGFFCAQCGSCENVKKRKESSTTENLDN 569

Query: 493  SSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRS 672
                F++ P    E  D+     R   S   Q FSIGQ LRIRKGPLKGYLCRVV+I+R+
Sbjct: 570  PIPMFSE-PYEQNEHRDT----ERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVKIFRN 624

Query: 673  DVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSS 852
            DVTVKLDSL+K++TV+ +FLS+P  + D ++  P   FG+Q+    G   +       +S
Sbjct: 625  DVTVKLDSLLKIVTVQAEFLSVPANRGDNSSGAPAGNFGSQDTSFFGSEAD------KAS 678

Query: 853  WDG-----ASSSWQALSTSTLFGNNNDQKTEQEQGADPWGSHASIVAGDHEGSDPWGSKL 1017
            WD       S SWQ  S+STL   N   ++E    +DPW   +S  AG    SDPWG K 
Sbjct: 679  WDNGLPSFGSDSWQPFSSSTLPAQNAGGESE----SDPWCKKSS--AGGE--SDPWGKK- 729

Query: 1018 VPVATDTEQGADPWGSKASISAGDKEQGADAWGRNMAGASTEKEERADPWGGKTVLGDSS 1197
                  T+  +DPWG+K  + +GD +  +D WG+ +   +   +  +DPWG K V+    
Sbjct: 730  ------TDSDSDPWGNKV-VPSGDGD--SDPWGKKVVAPA---DGDSDPWGKKVVV---- 773

Query: 1198 HSDTAFGSWVKVSSTSGEHNSWNKSEGGGFEKDGDGWNKPCVKTTPPTAKADDKQGADPW 1377
                            G+ + W K      + D D W K  +        A     +DPW
Sbjct: 774  -------------PADGDSDPWGKKVVAPADGDSDPWGKKVM--------APSDGDSDPW 812

Query: 1378 GSKVSVTARDDTQGADPWGSKPSLPAEADKGGADPWASKRAVGA---------------- 1509
            G KV   A  D   +DPWG K   PA+ D   +DPWA      A                
Sbjct: 813  GKKVVAPADGD---SDPWGKKVVAPADGD---SDPWAKNTTSSAFRVLNTGTTQKESSSG 866

Query: 1510 -----RADKGGADPWASK--RAVGARELEQGD-----------------DPWGNKMAA 1611
                 +A  GG+D   S   R    +E E+ D                 DPWGNK+ A
Sbjct: 867  KVWDKQAGVGGSDAAGSSWDRTSVNKECEKSDNWGEACRVADMGTGGDADPWGNKVKA 924



 Score = 70.1 bits (170), Expect = 1e-08
 Identities = 60/230 (26%), Positives = 81/230 (35%), Gaps = 17/230 (7%)
 Frame = +1

Query: 808  GGLSGNGEQTVVTSSWDG---------ASSSWQALSTSTLFGNNN--------DQKTEQE 936
            GG S   + T    SW G         ++  W +   +  +G N         D KT   
Sbjct: 1195 GGSSDWNKDTSNKGSWGGDNWNATNPPSNQPWSSSGGTKSYGENKPSTWNSSEDNKTSVG 1254

Query: 937  QGADPWGSHASIVAGDHEGSDPWGSKLVPVATDTEQGADPWGSKASISAGDKEQGADAWG 1116
            +  DPW S  +   G  + +D W SK+     +   G     +K S S G +E   D+W 
Sbjct: 1255 EQDDPWASKVASTEGKEQRNDTWASKMTSAGAEDSSGGWNTKTKDSCSDGGEESQNDSWA 1314

Query: 1117 RNMAGASTEKEERADPWGGKTVLGDSSHSDTAFGSWVKVSSTSGEHNSWNKSEGGGFEKD 1296
             N  G++  KE+  DPW                    KV ST G               D
Sbjct: 1315 -NKIGSNKGKEQETDPWAS------------------KVPSTVG-------------SDD 1342

Query: 1297 GDGWNKPCVKTTPPTAKADDKQGADPWGSKVSVTARDDTQGADPWGSKPS 1446
             +G      K TP   KAD     DPW SK      +D    D WG+  S
Sbjct: 1343 NNGSRSTTAKGTPSEEKAD-----DPWSSK----GGNDNIKIDSWGAGSS 1383



 Score = 68.6 bits (166), Expect = 3e-08
 Identities = 55/185 (29%), Positives = 73/185 (39%), Gaps = 1/185 (0%)
 Frame = +1

Query: 1066 KASISAGDKEQGADAWGRNMAGASTEKEERADPWGGKTVLGDSSHSDTAFGSWVKVSSTS 1245
            KAS   G    G+D+W                P+   T+   ++  ++    W K SS  
Sbjct: 676  KASWDNGLPSFGSDSW---------------QPFSSSTLPAQNAGGESESDPWCKKSSAG 720

Query: 1246 GEHNSWNKSEGGGFEKDGDGWNKPCVKTTPPTAKADDKQGADPWGSKVSVTARDDTQGAD 1425
            GE + W K      + D D                     +DPWG+KV  +   D+   D
Sbjct: 721  GESDPWGK------KTDSD---------------------SDPWGNKVVPSGDGDS---D 750

Query: 1426 PWGSKPSLPAEADKGGADPWASKRAVGARADKGGADPWASKRAVGARELEQGD-DPWGNK 1602
            PWG K   PA+ D   +DPW  K  V A  D   +DPW  K    A     GD DPWG K
Sbjct: 751  PWGKKVVAPADGD---SDPWGKKVVVPADGD---SDPWGKKVVAPA----DGDSDPWGKK 800

Query: 1603 MAATS 1617
            + A S
Sbjct: 801  VMAPS 805



 Score = 66.2 bits (160), Expect = 2e-07
 Identities = 78/309 (25%), Positives = 115/309 (37%), Gaps = 43/309 (13%)
 Frame = +1

Query: 817  SGNGEQTVVTSSWDGASSSWQALSTSTLFGNNNDQKTEQEQGADPWGSHASI-------- 972
            +G G+     S   G SSSW           N  ++T  +   + W  H S         
Sbjct: 1049 AGLGDWDKPKSFGGGGSSSW-----------NKGEETRADDQNNSWSRHGSFGGGRGFVR 1097

Query: 973  -------VAGDHEGSDPWGSKLVPVATDTEQGADPWGSKASISAGDKEQGADA--WGRNM 1125
                    +GD +G+   GS   P   D   G   W S +++   D E G     WGR  
Sbjct: 1098 GRGRGRGESGDSDGTTDQGSWKSPWGGDNA-GRPSWRSDSNV---DNEVGDSGGYWGRGR 1153

Query: 1126 AGAST---EKEERADPW--GGKTVLGDSSHSDTAFGS---------WVKVSSTSGEH--N 1257
             G          R + W  G ++  G    +D A G          W K +S  G    +
Sbjct: 1154 GGRGQYGGRGRGRDNGWRNGDRSNSGIGRENDGADGQKWGNGGSSDWNKDTSNKGSWGGD 1213

Query: 1258 SWNK---------SEGGGFEKDGDGWNKPCVKTTPPTAKADDKQGADPWGSKVSVTARDD 1410
            +WN          S  GG +  G+  NKP    +    K    +  DPW SKV+ T   +
Sbjct: 1214 NWNATNPPSNQPWSSSGGTKSYGE--NKPSTWNSSEDNKTSVGEQDDPWASKVASTEGKE 1271

Query: 1411 TQGADPWGSKPSLPAEADKGGADPWASKRAVGARADKGGADPWASKRAVGARE-LEQGDD 1587
             Q  D W SK +     D  G     +K +     ++   D WA+K  +G+ +  EQ  D
Sbjct: 1272 -QRNDTWASKMTSAGAEDSSGGWNTKTKDSCSDGGEESQNDSWANK--IGSNKGKEQETD 1328

Query: 1588 PWGNKMAAT 1614
            PW +K+ +T
Sbjct: 1329 PWASKVPST 1337


>gb|PAN18741.1| hypothetical protein PAHAL_C02415 [Panicum hallii]
          Length = 1664

 Score =  310 bits (794), Expect = 5e-89
 Identities = 217/566 (38%), Positives = 289/566 (51%), Gaps = 56/566 (9%)
 Frame = +1

Query: 4    EDVSWLSTVYNVRK---------------KMKSSEAADSKGASEL---GNGFILHDLVLF 129
            +D+ W+S++Y  +K               KMKSS+ + +  ++E     + F LHDLVLF
Sbjct: 383  DDLDWVSSIYGPKKRNIPAKPDIKSSSSSKMKSSKTSKASISTEDFDDNDEFNLHDLVLF 442

Query: 130  GRKGFGVXXXXXXXXXXXXXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDT 309
            GRK FGV                EG  V T+K  DIK  CVDKMFTA DR  K + INDT
Sbjct: 443  GRKDFGVIIAIEKDGFRILKGGPEGSAV-TVKKNDIKKSCVDKMFTAVDRQNKIVSINDT 501

Query: 310  VKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGN 489
            V VL+GP +G++GVV+H+Y G LFIY+E++ EN G FCA+   CEN+   KD     GG+
Sbjct: 502  VNVLEGPFQGKQGVVKHLYMGILFIYNESESENCGFFCAQCGSCENVKKRKD----LGGS 557

Query: 490  KSSSSFNQSPV---RSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVR 660
             + +  N  P+    S EQ +   T  R   S   Q FSIGQ LRIRKGPLKGYLCRVVR
Sbjct: 558  TTENLDNPFPMFAEPSYEQNEHRGT-ERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVR 616

Query: 661  IYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTV 840
            I+R+DVTVKLDSL+K++TV+ +FLS+P  + D  +  P   FG+Q+  T       E+T 
Sbjct: 617  IFRNDVTVKLDSLLKIVTVQAEFLSVPANRGDNLSGAPAGNFGSQD--TSFFGSEAEKT- 673

Query: 841  VTSSWDG-----ASSSWQALSTSTLFGNN------ND---QKTEQEQGADPWGSH----- 963
               SWD       S SWQ  S+STL   N      ND   +K+  E  +DPWG       
Sbjct: 674  ---SWDNGLPSFGSDSWQPFSSSTLPVQNTGGESENDPWSKKSSAEGESDPWGKKTDGDP 730

Query: 964  ---ASIVAGDHEG-SDPWGSKLVPVATDTEQGADPWGSKASISA-GDKEQGADAWGRNMA 1128
                + VA   +G SDPWG+K+ P A   +  +DPWG+K + SA GD    +D WG+ + 
Sbjct: 731  DPWGNKVAHSADGDSDPWGNKVAPSA---DGDSDPWGNKVAPSAYGD----SDPWGKKVV 783

Query: 1129 GASTEKEERADPWGGKTVLG-----------DSSHSDTAFGSWVKVSSTSGEHNSWNKSE 1275
               T     +D WG KT                S SD A+G    V  +    +SW+ + 
Sbjct: 784  ---TPAHGDSDAWGKKTTSSAVGVWNAGAAQKESSSDNAWGKQAGVGRSDAAGSSWDGTV 840

Query: 1276 GGGFEKDGDGWNKPCVKTTPPTAKADDKQGADPWGSKVSVTARDDTQGADPWGSKPSLPA 1455
                 +  D W + C +       AD    ADPWGSKV      DT+G D W      P 
Sbjct: 841  VNKESEKSDNWGEAC-RVVDMGTGAD----ADPWGSKVKAI---DTEGTDSWEKATMPPD 892

Query: 1456 EADKGGADPWASKRAVGARADKGGAD 1533
               +G +  W   R +G   +  G D
Sbjct: 893  NKLEGVSQGWG--RPLGKSNEDQGKD 916



 Score = 64.3 bits (155), Expect = 6e-07
 Identities = 64/265 (24%), Positives = 93/265 (35%), Gaps = 5/265 (1%)
 Frame = +1

Query: 820  GNGEQTVVTSSWDGASSSWQALSTSTLFGNNNDQKTEQEQGADPWGSHAS---IVAGDHE 990
            G  + +   SS D   S  +     T          E   G   W + A       G+  
Sbjct: 1189 GENKPSTWNSSKDNKPSVGKEQQNDTWASKMTSAGAEDNSGG--WNTRAKDSCTDGGEER 1246

Query: 991  GSDPWGSKLVPVATDTEQGADPWGSKASISAGDKEQGADAWGRNMAGASTEKEERA-DPW 1167
             +DPW +K      D EQ  DPW SK   S G  +  + +W  N     T  EE+A DPW
Sbjct: 1247 QNDPWANK-AGTNKDKEQETDPWTSKVPSSVGSDDNNS-SW--NTTAKDTPSEEKAGDPW 1302

Query: 1168 GGKTVLGDSSHSDTAFGSWVKVSSTSGEHNSWNKSEGGGFEKDGDGWNKPCVKTTPPTAK 1347
              K    +   +D    SW   SS   + +SW+K     F      W+KP          
Sbjct: 1303 SSKGSNDNIKKTD----SWGAGSSGGNQESSWSKP---NFSLGDQAWSKPRFGD-----N 1350

Query: 1348 ADDKQGADPWGSKVSVTARDDTQGADPWGSKPSLPAEADKGGADPWASKRAVGARADKGG 1527
              + +G    G +     R+   G   W           +   +PW+S+   G R  +G 
Sbjct: 1351 GGNSRGGFGRGYRGRGRGRNFGDGGSSWNGGNKNDESGGERSEEPWSSRDLDGGRG-RGR 1409

Query: 1528 ADPWASKRAVGARELEQGDD-PWGN 1599
                   R+ G+     GD   WG+
Sbjct: 1410 GRFGRGDRSQGSSNFGSGDSGSWGS 1434


>gb|PAN18742.1| hypothetical protein PAHAL_C02415 [Panicum hallii]
          Length = 1679

 Score =  310 bits (794), Expect = 5e-89
 Identities = 217/566 (38%), Positives = 289/566 (51%), Gaps = 56/566 (9%)
 Frame = +1

Query: 4    EDVSWLSTVYNVRK---------------KMKSSEAADSKGASEL---GNGFILHDLVLF 129
            +D+ W+S++Y  +K               KMKSS+ + +  ++E     + F LHDLVLF
Sbjct: 383  DDLDWVSSIYGPKKRNIPAKPDIKSSSSSKMKSSKTSKASISTEDFDDNDEFNLHDLVLF 442

Query: 130  GRKGFGVXXXXXXXXXXXXXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDT 309
            GRK FGV                EG  V T+K  DIK  CVDKMFTA DR  K + INDT
Sbjct: 443  GRKDFGVIIAIEKDGFRILKGGPEGSAV-TVKKNDIKKSCVDKMFTAVDRQNKIVSINDT 501

Query: 310  VKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGN 489
            V VL+GP +G++GVV+H+Y G LFIY+E++ EN G FCA+   CEN+   KD     GG+
Sbjct: 502  VNVLEGPFQGKQGVVKHLYMGILFIYNESESENCGFFCAQCGSCENVKKRKD----LGGS 557

Query: 490  KSSSSFNQSPV---RSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVR 660
             + +  N  P+    S EQ +   T  R   S   Q FSIGQ LRIRKGPLKGYLCRVVR
Sbjct: 558  TTENLDNPFPMFAEPSYEQNEHRGT-ERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVR 616

Query: 661  IYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTV 840
            I+R+DVTVKLDSL+K++TV+ +FLS+P  + D  +  P   FG+Q+  T       E+T 
Sbjct: 617  IFRNDVTVKLDSLLKIVTVQAEFLSVPANRGDNLSGAPAGNFGSQD--TSFFGSEAEKT- 673

Query: 841  VTSSWDG-----ASSSWQALSTSTLFGNN------ND---QKTEQEQGADPWGSH----- 963
               SWD       S SWQ  S+STL   N      ND   +K+  E  +DPWG       
Sbjct: 674  ---SWDNGLPSFGSDSWQPFSSSTLPVQNTGGESENDPWSKKSSAEGESDPWGKKTDGDP 730

Query: 964  ---ASIVAGDHEG-SDPWGSKLVPVATDTEQGADPWGSKASISA-GDKEQGADAWGRNMA 1128
                + VA   +G SDPWG+K+ P A   +  +DPWG+K + SA GD    +D WG+ + 
Sbjct: 731  DPWGNKVAHSADGDSDPWGNKVAPSA---DGDSDPWGNKVAPSAYGD----SDPWGKKVV 783

Query: 1129 GASTEKEERADPWGGKTVLG-----------DSSHSDTAFGSWVKVSSTSGEHNSWNKSE 1275
               T     +D WG KT                S SD A+G    V  +    +SW+ + 
Sbjct: 784  ---TPAHGDSDAWGKKTTSSAVGVWNAGAAQKESSSDNAWGKQAGVGRSDAAGSSWDGTV 840

Query: 1276 GGGFEKDGDGWNKPCVKTTPPTAKADDKQGADPWGSKVSVTARDDTQGADPWGSKPSLPA 1455
                 +  D W + C +       AD    ADPWGSKV      DT+G D W      P 
Sbjct: 841  VNKESEKSDNWGEAC-RVVDMGTGAD----ADPWGSKVKAI---DTEGTDSWEKATMPPD 892

Query: 1456 EADKGGADPWASKRAVGARADKGGAD 1533
               +G +  W   R +G   +  G D
Sbjct: 893  NKLEGVSQGWG--RPLGKSNEDQGKD 916



 Score = 71.6 bits (174), Expect = 3e-09
 Identities = 64/291 (21%), Positives = 103/291 (35%), Gaps = 27/291 (9%)
 Frame = +1

Query: 808  GGLSGNGEQTVVTSSWD--GASSSWQALSTSTLFGNNNDQKTEQEQGADPWGSHASIVAG 981
            GG + N         W   G + S+     ST + ++ D K    +  DPW S  + + G
Sbjct: 1164 GGDNWNATNPPSNQPWSSSGVTKSFGENKPST-WNSSKDNKPSVGEQDDPWASKVASIEG 1222

Query: 982  DHEGSDPWGSKLVPVATDTEQGADPWGSKASISAGDKEQGADAWGRNMAGASTEKEERAD 1161
              + +D W SK+     +   G     +K S + G +E+  D W  N AG + +KE+  D
Sbjct: 1223 KEQQNDTWASKMTSAGAEDNSGGWNTRAKDSCTDGGEERQNDPWA-NKAGTNKDKEQETD 1281

Query: 1162 PWGGK---------------TVLGDSSHSDTAFGSWVKVSSTSG--EHNSWNKSEGGGFE 1290
            PW  K               T   D+   + A   W    S     + +SW     GG +
Sbjct: 1282 PWTSKVPSSVGSDDNNSSWNTTAKDTPSEEKAGDPWSSKGSNDNIKKTDSWGAGSSGGNQ 1341

Query: 1291 KDGDGWNKPCVKTTPPT-------AKADDKQGADPWGSKVSVTARDDTQGADPWGSKPSL 1449
            +    W+KP                   + +G    G +     R+   G   W      
Sbjct: 1342 E--SSWSKPNFSLGDQAWSKPRFGDNGGNSRGGFGRGYRGRGRGRNFGDGGSSWNGGNKN 1399

Query: 1450 PAEADKGGADPWASKRAVGARADKGGADPWASKRAVGARELEQGDD-PWGN 1599
                 +   +PW+S+   G R  +G        R+ G+     GD   WG+
Sbjct: 1400 DESGGERSEEPWSSRDLDGGRG-RGRGRFGRGDRSQGSSNFGSGDSGSWGS 1449


>ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dendrobium catenatum]
 gb|PKU72137.1| Putative transcription elongation factor SPT5 like 1 [Dendrobium
            catenatum]
          Length = 1946

 Score =  303 bits (777), Expect = 1e-86
 Identities = 226/601 (37%), Positives = 298/601 (49%), Gaps = 65/601 (10%)
 Frame = +1

Query: 4    EDVSWLSTVYNVRKKMKSSEAADSKGASELG------------------------NGFIL 111
            +DV WLS++Y  R K K  E +  K   +                          NGF +
Sbjct: 379  KDVDWLSSIYKARMKKKLPETSHQKNGEKYNQKDGEKSNPKVGEKSNQKDADKQINGFDI 438

Query: 112  HDLVLFGRKGFGVXXXXXXXXXXXXXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKT 291
             DLVLFG+K  G+                 G EV++I    IK  CVDK+FTA+DR  KT
Sbjct: 439  DDLVLFGKKSCGIIIDKENDTFKVLKGDVNGSEVVSINIRVIKKICVDKVFTATDRCMKT 498

Query: 292  IYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSS 471
            I I+D VKV +GPLEGREG+VRHMYKG LFIYDE Q EN+G FCA S +C+ +   +D  
Sbjct: 499  ISIDDVVKVFEGPLEGREGIVRHMYKGVLFIYDECQSENNGFFCANSGICDLVKKSRDLG 558

Query: 472  FRKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCR 651
              K   ++  SF QSP+R  EQ+D+S +FSRN+ S S   FS+GQTLRIRKGPLKGYLCR
Sbjct: 559  GGKLSTRAGPSFAQSPIRLSEQDDNSQSFSRNQQSNSLGTFSVGQTLRIRKGPLKGYLCR 618

Query: 652  VVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPTDIFGTQE-RFTGGL--SG 822
            V+R+ R+D+TVKLDSL K++TV+E+ LS+PN KRD A  M  ++FG+QE + T GL  +G
Sbjct: 619  VIRMRRADITVKLDSLGKLLTVDEKLLSLPNSKRDDATAMQCNMFGSQEDQSTDGLLDAG 678

Query: 823  NG------EQTVVTSSWDGASSSWQALSTSTL-FGNNNDQKTEQEQGADPWGSHASIVAG 981
             G      E     SS+     SW   S S+  F   ND K +Q Q ADPWGS  S   G
Sbjct: 679  GGLGMDNFEFNAGMSSF--GRDSWNTASCSSFSFPRENDSK-DQNQIADPWGSKLSSWNG 735

Query: 982  DHEGSDPWGSKLVPVATDTEQGADPWGSKASISAGDK------EQGADAWGRNMAGASTE 1143
            D E      +K    +   EQ +  W     + +GDK      +   DAW +    A T+
Sbjct: 736  DQEQGP--ANKGEAPSVSAEQSS--WN---KVESGDKGVDAKCKNDVDAWNK----AFTK 784

Query: 1144 KEERADPW------GGKTVL--GDSSHSDTAFGSWVK-VSSTSGEHNSWNKSE------G 1278
             E     W       G+T    GD   SD+A  + V+ VS   G    W+K++      G
Sbjct: 785  VETSTSGWPAPVQKTGQTWCSNGDGDGSDSAAHTAVEGVSDAVG----WSKAKLSTPDSG 840

Query: 1279 GGFEKDGDGWNK-----PCVKTTPPTAKADDK-QGADPWGS----KVSVTARDDTQGADP 1428
             G     D WNK     P +  T  +     K  G+D  GS      +   + D+ G D 
Sbjct: 841  QGRTIGEDSWNKAASKPPILSDTETSGWEQTKLPGSDAGGSWNTNGAAADRKKDSSGKD- 899

Query: 1429 WGSKPSLPAEADKGGADPWASKRAVGARADKGGADPWASKRAVGARELEQGDDPWGNKMA 1608
                    A+   G +  WAS + VG        D W+     G   L   +D WG   A
Sbjct: 900  -------RADGFGGQSGNWASPKNVGG----DNQDSWSIN---GKGFLGNNEDGWGKSAA 945

Query: 1609 A 1611
            +
Sbjct: 946  S 946


>ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 1808

 Score =  302 bits (774), Expect = 2e-86
 Identities = 193/502 (38%), Positives = 262/502 (52%), Gaps = 44/502 (8%)
 Frame = +1

Query: 4    EDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXX 183
            ED++W+S++YN RKK   +E  D + +    N + LHDLVLFG+K +GV           
Sbjct: 374  EDLNWVSSIYNARKKKPGAEILDDEVSVVTKNDYGLHDLVLFGQKHYGVIIAVEKDCFKI 433

Query: 184  XXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHM 363
                 EG+ V+T+K +DIK  CVDKMFTA D  + TI+IND VK+L GPL+GREGVV+HM
Sbjct: 434  LKGDIEGENVVTVKIQDIKNSCVDKMFTALDWKKTTIFINDIVKILAGPLQGREGVVKHM 493

Query: 364  YKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGN--KSSSSFNQSPVRSCEQ 537
            YKGTLFI+ E + +NSG F  KS  CE +   K+S   K G   ++++SF+QSP+R+ ++
Sbjct: 494  YKGTLFIHAEYETKNSGFFSVKSVSCEKVKESKNSYGVKAGKGKEANTSFSQSPIRTFDR 553

Query: 538  EDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV 717
            E++++  +R   S++ Q FSIGQTLRIR+GPLKGYLCRVV IYRSDVTVKLDSLVK+ITV
Sbjct: 554  ENNAHGSTRRGQSDNEQMFSIGQTLRIREGPLKGYLCRVVGIYRSDVTVKLDSLVKLITV 613

Query: 718  EEQFLSIPNIKRDFA------AEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDG-----A 864
            +++ L++P IK D A      A + +D FG          G        SSWD       
Sbjct: 614  KDKSLAVPKIKGDNATGSSDQATISSDHFGLSTACPS--FGETSTPAEKSSWDSVMPSFG 671

Query: 865  SSSWQALSTS-TLFGNNNDQKTEQEQGADPWGSHASIV-----AGDHEGSDPWGSKLVPV 1026
              SWQ  S+S +    NN+ +T+    ADPW + A+        G  E +D WG  L   
Sbjct: 672  RDSWQPFSSSNSSVACNNENQTDHGNEADPWSNMATATGKQTSGGSIEITDGWGLGL--- 728

Query: 1027 ATDTEQGADPWGSKASISAGD---KEQGADAWGRNMAGASTEK------------EERAD 1161
                  GADPW      +  D    +     WG +      EK            E ++ 
Sbjct: 729  ------GADPWNKVTYANRTDAPTSDGAIGGWGNSSNSGLLEKASSGAGDQAGSSEIKSY 782

Query: 1162 PWGGKTVL----------GDSSHSDTAFGSWVKVSSTSGEHNSWNKSEGGGFEKDGDGWN 1311
             W  K  +             +  D A G W   S       SW+    G   K  D W+
Sbjct: 783  DWSNKAAVVLRNDVDGWEKSKTSVDDAGGIWDNESVKKSNACSWDSEGIGKMSKKEDAWD 842

Query: 1312 KPCVKTTPPTAKADDKQGADPW 1377
            K        TAK+ +K   D W
Sbjct: 843  K--------TAKSQEKSN-DNW 855


>ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 1809

 Score =  302 bits (774), Expect = 2e-86
 Identities = 193/502 (38%), Positives = 262/502 (52%), Gaps = 44/502 (8%)
 Frame = +1

Query: 4    EDVSWLSTVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXX 183
            ED++W+S++YN RKK   +E  D + +    N + LHDLVLFG+K +GV           
Sbjct: 375  EDLNWVSSIYNARKKKPGAEILDDEVSVVTKNDYGLHDLVLFGQKHYGVIIAVEKDCFKI 434

Query: 184  XXXXXEGQEVMTIKSEDIKGHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHM 363
                 EG+ V+T+K +DIK  CVDKMFTA D  + TI+IND VK+L GPL+GREGVV+HM
Sbjct: 435  LKGDIEGENVVTVKIQDIKNSCVDKMFTALDWKKTTIFINDIVKILAGPLQGREGVVKHM 494

Query: 364  YKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGN--KSSSSFNQSPVRSCEQ 537
            YKGTLFI+ E + +NSG F  KS  CE +   K+S   K G   ++++SF+QSP+R+ ++
Sbjct: 495  YKGTLFIHAEYETKNSGFFSVKSVSCEKVKESKNSYGVKAGKGKEANTSFSQSPIRTFDR 554

Query: 538  EDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV 717
            E++++  +R   S++ Q FSIGQTLRIR+GPLKGYLCRVV IYRSDVTVKLDSLVK+ITV
Sbjct: 555  ENNAHGSTRRGQSDNEQMFSIGQTLRIREGPLKGYLCRVVGIYRSDVTVKLDSLVKLITV 614

Query: 718  EEQFLSIPNIKRDFA------AEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDG-----A 864
            +++ L++P IK D A      A + +D FG          G        SSWD       
Sbjct: 615  KDKSLAVPKIKGDNATGSSDQATISSDHFGLSTACPS--FGETSTPAEKSSWDSVMPSFG 672

Query: 865  SSSWQALSTS-TLFGNNNDQKTEQEQGADPWGSHASIV-----AGDHEGSDPWGSKLVPV 1026
              SWQ  S+S +    NN+ +T+    ADPW + A+        G  E +D WG  L   
Sbjct: 673  RDSWQPFSSSNSSVACNNENQTDHGNEADPWSNMATATGKQTSGGSIEITDGWGLGL--- 729

Query: 1027 ATDTEQGADPWGSKASISAGD---KEQGADAWGRNMAGASTEK------------EERAD 1161
                  GADPW      +  D    +     WG +      EK            E ++ 
Sbjct: 730  ------GADPWNKVTYANRTDAPTSDGAIGGWGNSSNSGLLEKASSGAGDQAGSSEIKSY 783

Query: 1162 PWGGKTVL----------GDSSHSDTAFGSWVKVSSTSGEHNSWNKSEGGGFEKDGDGWN 1311
             W  K  +             +  D A G W   S       SW+    G   K  D W+
Sbjct: 784  DWSNKAAVVLRNDVDGWEKSKTSVDDAGGIWDNESVKKSNACSWDSEGIGKMSKKEDAWD 843

Query: 1312 KPCVKTTPPTAKADDKQGADPW 1377
            K        TAK+ +K   D W
Sbjct: 844  K--------TAKSQEKSN-DNW 856