BLASTX nr result
ID: Ophiopogon23_contig00014329
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00014329
(704 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III s... 237 2e-75
ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III s... 234 3e-74
ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III s... 219 2e-68
ref|XP_020691279.1| DNA-directed RNA polymerase III subunit RPC6... 213 7e-66
ref|XP_020246712.1| DNA-directed RNA polymerase III subunit RPC6... 212 1e-65
ref|XP_009404340.1| PREDICTED: DNA-directed RNA polymerase III s... 209 3e-64
ref|XP_020574967.1| DNA-directed RNA polymerase III subunit RPC6... 207 4e-63
ref|XP_019705973.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 201 2e-61
gb|PKA46474.1| hypothetical protein AXF42_Ash012607 [Apostasia s... 199 2e-60
ref|XP_021609496.1| DNA-directed RNA polymerase III subunit RPC6... 184 2e-54
ref|XP_006427248.1| DNA-directed RNA polymerase III subunit RPC6... 182 4e-54
ref|XP_021672680.1| DNA-directed RNA polymerase III subunit RPC6... 182 7e-54
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 181 2e-53
ref|XP_021681807.1| DNA-directed RNA polymerase III subunit RPC6... 179 8e-53
gb|OVA07786.1| RNA polymerase Rpc34 [Macleaya cordata] 179 1e-52
gb|OVA19488.1| RNA polymerase Rpc34 [Macleaya cordata] 178 2e-52
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu... 178 1e-51
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s... 176 1e-51
ref|XP_015872858.1| PREDICTED: DNA-directed RNA polymerase III s... 176 1e-51
gb|PNT51939.1| hypothetical protein POPTR_001G003700v3 [Populus ... 178 2e-51
>ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927733.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927734.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927735.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
Length = 237
Score = 237 bits (605), Expect = 2e-75
Identities = 117/210 (55%), Positives = 158/210 (75%)
Frame = -2
Query: 631 MLPRKRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKS 452
MLP+KR PDS P P L + E +YELI + G+ A++K++ G+ ++VTK LKS
Sbjct: 6 MLPQKRPHPDSKPKLPALSETERILYELIRSKQNIGIWTADMKRET-GLQTTVVTKTLKS 64
Query: 451 LQAKNHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIK 272
LQ KN IK+V ++ +K +KIYMA+EFEPSKEI GG WY DG LD+ I+ILR+QC+ HI+
Sbjct: 65 LQNKNLIKDVVNIHNKARKIYMAMEFEPSKEISGGSWYSDGSLDIEFIRILREQCLKHIE 124
Query: 271 KFKVATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGK 92
+ ++AT+E ++++I+ VF ++ T+QQIVEIVN MVLDK +EELKSTG+G FS VP+GK
Sbjct: 125 RLQIATMEAIYKSIQESRVFKVECTMQQIVEIVNAMVLDKEIEELKSTGIGDFSKVPSGK 184
Query: 91 DCYRILEGREGPKESALVSMACGVCPRISE 2
CY+ L+GREGPK AL S+ CGVCPRI E
Sbjct: 185 ICYKSLKGREGPKIGALSSIPCGVCPRIGE 214
>ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Phoenix
dactylifera]
ref|XP_008813400.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Phoenix
dactylifera]
Length = 232
Score = 234 bits (596), Expect = 3e-74
Identities = 119/210 (56%), Positives = 155/210 (73%)
Frame = -2
Query: 631 MLPRKRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKS 452
MLP+KR PDS P L + E +YELI + G+ A++K++ G+ ++VTK LKS
Sbjct: 1 MLPQKRPHPDSKTKLPPLSETERVLYELIKSKQNLGIWTADMKRET-GLQTTVVTKTLKS 59
Query: 451 LQAKNHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIK 272
LQ KN IK+V ++ +K +KIYMAVEFEPSKEI GG WY DG LD I+ILR+QC+ HI+
Sbjct: 60 LQNKNLIKDVVNIHNKARKIYMAVEFEPSKEISGGSWYSDGSLDTDFIRILREQCLKHIE 119
Query: 271 KFKVATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGK 92
+ +VAT+E ++++I+ VF ++ T+QQIVEIVN MVLDK VEELKSTG+G FS V +GK
Sbjct: 120 RLQVATMEAIYKSIQESRVFKVECTMQQIVEIVNAMVLDKEVEELKSTGIGDFSKVQSGK 179
Query: 91 DCYRILEGREGPKESALVSMACGVCPRISE 2
CYR L+GREGPK A S+ CGVCPRISE
Sbjct: 180 ICYRSLKGREGPKVGAFSSIPCGVCPRISE 209
>ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
ref|XP_009386160.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
Length = 237
Score = 219 bits (558), Expect = 2e-68
Identities = 112/210 (53%), Positives = 146/210 (69%)
Frame = -2
Query: 631 MLPRKRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKS 452
M P+KR+ PDS P L + E +YELI + G+ A++KK+ G+ +VTKALKS
Sbjct: 6 MTPQKRAQPDSQSQPPALPENERILYELIKSRKNMGIWTADMKKET-GLQNIVVTKALKS 64
Query: 451 LQAKNHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIK 272
LQ KN IK+V +V +K +KI+MAVEFEPSKE+ GG WY +G LD I ILR+ C+ HI+
Sbjct: 65 LQNKNLIKDVVNVHNKARKIFMAVEFEPSKEVSGGSWYSEGSLDTEFINILRKMCLKHIE 124
Query: 271 KFKVATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGK 92
+ KVAT+E +W++I V + T+QQ++EIV + LDK +EELKSTGVG FS V TGK
Sbjct: 125 ELKVATIEDIWKSISASGVLKVACTMQQVLEIVRALALDKEIEELKSTGVGEFSTVQTGK 184
Query: 91 DCYRILEGREGPKESALVSMACGVCPRISE 2
CYR L GRE P+ L S+ CGVCPRISE
Sbjct: 185 VCYRSLRGREAPRVGHLSSIPCGVCPRISE 214
>ref|XP_020691279.1| DNA-directed RNA polymerase III subunit RPC6 [Dendrobium catenatum]
ref|XP_020691280.1| DNA-directed RNA polymerase III subunit RPC6 [Dendrobium catenatum]
gb|PKU75411.1| hypothetical protein MA16_Dca020480 [Dendrobium catenatum]
Length = 231
Score = 213 bits (541), Expect = 7e-66
Identities = 109/209 (52%), Positives = 148/209 (70%)
Frame = -2
Query: 628 LPRKRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKSL 449
LP+KR P L + E ++Y+LI E G+ A++KK+ G+P + VTKALKSL
Sbjct: 8 LPQKRK-------VPALPENEKKLYDLIWSKETLGIWTADMKKET-GLPNNAVTKALKSL 59
Query: 448 QAKNHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIKK 269
Q+K IK+V ++ +K KKIYMAVEFEPSKEI GG WY +G LD+ I ILR+QC H+++
Sbjct: 60 QSKGFIKDVVNIHNKAKKIYMAVEFEPSKEISGGTWYSEGSLDLEFITILRKQCRLHVER 119
Query: 268 FKVATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGKD 89
KVAT+E +W+ IR VF +D +LQQI EI++ MVLDK +EEL S+GVG F + G++
Sbjct: 120 LKVATLENVWQFIRDSKVFYIDFSLQQIKEIMSAMVLDKELEELISSGVGDFFHIRAGRE 179
Query: 88 CYRILEGREGPKESALVSMACGVCPRISE 2
CYR L+GR+GPKE ++ CGVCPRI+E
Sbjct: 180 CYRSLKGRDGPKEGFFSAVPCGVCPRINE 208
>ref|XP_020246712.1| DNA-directed RNA polymerase III subunit RPC6 [Asparagus
officinalis]
ref|XP_020246713.1| DNA-directed RNA polymerase III subunit RPC6 [Asparagus
officinalis]
gb|ONK58492.1| uncharacterized protein A4U43_C09F13600 [Asparagus officinalis]
Length = 231
Score = 212 bits (539), Expect = 1e-65
Identities = 114/207 (55%), Positives = 144/207 (69%), Gaps = 5/207 (2%)
Frame = -2
Query: 607 PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKSLQAKNHIK 428
P P PKL D ESE+Y +I + SG+ ++KK+ +G P + V KALKSL KN IK
Sbjct: 2 PPQNPRLPKLSDVESEMYSVIKSRKGSGIWTNDLKKEVMG-PPTAVAKALKSLLTKNLIK 60
Query: 427 EVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIKKFKVATVE 248
EV S+K+K +K+ MAVEFEPS ++ GG WYQ G LDV IKILRQQC H+++ KVAT E
Sbjct: 61 EVISIKNKSRKMVMAVEFEPSADVSGGAWYQSGSLDVAFIKILRQQCRRHVEEHKVATCE 120
Query: 247 KLWEAI----RGL-HVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGKDCY 83
+ +AI RG VF +ITLQQ+ EI+ LMVLDK VE+++S+GVG FS VP G+DCY
Sbjct: 121 MVRKAIKEPKRGRPPVFTTEITLQQVYEILELMVLDKEVEKVRSSGVGDFSHVPEGRDCY 180
Query: 82 RILEGREGPKESALVSMACGVCPRISE 2
R+ G GPKE A S+ CGVCPRI E
Sbjct: 181 RVSRGEGGPKEGAFASIPCGVCPRIHE 207
>ref|XP_009404340.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
ref|XP_018684305.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
Length = 237
Score = 209 bits (531), Expect = 3e-64
Identities = 106/210 (50%), Positives = 142/210 (67%)
Frame = -2
Query: 631 MLPRKRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKS 452
M P+KR PDS P L + E +YELI + G+ IA++K++A GI +VTKALKS
Sbjct: 6 MTPQKRRQPDSQTQPPALPESERIVYELIKSRKNMGIWIADIKREA-GIQNIIVTKALKS 64
Query: 451 LQAKNHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIK 272
LQ+KN IK+V +V +K +K +MAVEFEPSKE+ GG WY DG LD I ILR C+ HI+
Sbjct: 65 LQSKNLIKDVVNVHNKSRKTFMAVEFEPSKEVSGGSWYSDGSLDTEFINILRMMCLKHIE 124
Query: 271 KFKVATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGK 92
++AT+E + + I + ++ T+QQ++EIV + LDK +EELKSTGV FS V +GK
Sbjct: 125 DLRIATIEDIHKCIAASRIMKVECTMQQVLEIVRALALDKEIEELKSTGVAEFSMVQSGK 184
Query: 91 DCYRILEGREGPKESALVSMACGVCPRISE 2
CYR GR+GP L S+ CG+CPRISE
Sbjct: 185 ICYRRSRGRQGPSVGHLSSIPCGMCPRISE 214
>ref|XP_020574967.1| DNA-directed RNA polymerase III subunit RPC6 [Phalaenopsis
equestris]
Length = 282
Score = 207 bits (527), Expect = 4e-63
Identities = 105/209 (50%), Positives = 144/209 (68%)
Frame = -2
Query: 628 LPRKRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKSL 449
LP+KR P L + E ++++LI + G+ A++KKQ G+ + VTKALKSL
Sbjct: 59 LPQKRK-------LPPLPENEKKLHDLIWSKQSLGIWTADMKKQT-GLANNAVTKALKSL 110
Query: 448 QAKNHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIKK 269
Q+KN IK+V +V +K +K +MAVEFEPSKEI GG WY DG LD+ I+ILR+QC H+++
Sbjct: 111 QSKNLIKDVVNVHNKARKFFMAVEFEPSKEISGGTWYSDGTLDLEFIRILREQCRMHVER 170
Query: 268 FKVATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGKD 89
K+A+VE +W+ +R +F + +LQQI EI+ M LDK +EEL S+GVG FS++ GK
Sbjct: 171 LKIASVENVWKCVRDSGIFKTECSLQQIQEILVAMYLDKEIEELISSGVGEFSNIQAGKK 230
Query: 88 CYRILEGREGPKESALVSMACGVCPRISE 2
CYR L GR GPK L S+ CGVCPRI+E
Sbjct: 231 CYRSLRGRGGPKAGGLSSVPCGVCPRINE 259
>ref|XP_019705973.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit rpc6-like [Elaeis guineensis]
Length = 240
Score = 201 bits (512), Expect = 2e-61
Identities = 108/212 (50%), Positives = 143/212 (67%), Gaps = 3/212 (1%)
Frame = -2
Query: 628 LPRKRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKSL 449
LP+K+ DS P L + E +Y LI + G+ A+ K+ G+ ++VTK LKSL
Sbjct: 7 LPQKQLLRDSKTKLPPLSETERVLYGLIKSKQNLGIWTADTKRDT-GLQTTVVTKTLKSL 65
Query: 448 QAKNHIKEVASVKH---KRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNH 278
Q KN IK+V ++ + K +KIY+AVEFEP KEI GG WY DG LD I+ILR+QC+NH
Sbjct: 66 QNKNLIKDVVNIHNIHNKARKIYVAVEFEPXKEISGGSWYSDGSLDTDFIRILREQCLNH 125
Query: 277 IKKFKVATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPT 98
I++F+VAT+E ++++I+ VF ++ T+ IVEIVN MVLDK VEELKSTG+G FS +
Sbjct: 126 IERFQVATMEAIYKSIQESRVFKVECTMHHIVEIVNAMVLDKEVEELKSTGIGDFSKAQS 185
Query: 97 GKDCYRILEGREGPKESALVSMACGVCPRISE 2
GK CYR L R G K A S+ CGVCPRI E
Sbjct: 186 GKICYRSLRSRGGLKIGAFSSIPCGVCPRIRE 217
>gb|PKA46474.1| hypothetical protein AXF42_Ash012607 [Apostasia shenzhenica]
Length = 230
Score = 199 bits (505), Expect = 2e-60
Identities = 100/195 (51%), Positives = 131/195 (67%)
Frame = -2
Query: 586 PKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKSLQAKNHIKEVASVKH 407
P L + E ++Y++I GM A++KK A G+P + TK LKSLQ K+ IK VA++ +
Sbjct: 14 PSLPENEKKLYDVIWSKGTMGMWTADMKK-ATGLPNNTFTKTLKSLQTKDLIKAVANINN 72
Query: 406 KRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIKKFKVATVEKLWEAIR 227
K KK +MAVEFEPSKEI GG WY +G LD I +LR QC+ HI++ KVATVE +W+ IR
Sbjct: 73 KGKKFFMAVEFEPSKEITGGTWYSEGSLDFEFINVLRGQCLRHIERHKVATVEIVWQCIR 132
Query: 226 GLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGKDCYRILEGREGPKES 47
VF + T+QQI EI+ MVLDK +EEL S+GVG S +P G+ CYR GR G +
Sbjct: 133 DSGVFTTECTMQQIKEIMGAMVLDKEIEELNSSGVGDSSHIPAGRKCYRSSRGRAGSNDG 192
Query: 46 ALVSMACGVCPRISE 2
+ S+ CGVCPRI E
Sbjct: 193 SFASIPCGVCPRIYE 207
>ref|XP_021609496.1| DNA-directed RNA polymerase III subunit RPC6 [Manihot esculenta]
gb|OAY52825.1| hypothetical protein MANES_04G114300 [Manihot esculenta]
gb|OAY52826.1| hypothetical protein MANES_04G114300 [Manihot esculenta]
Length = 236
Score = 184 bits (466), Expect = 2e-54
Identities = 95/214 (44%), Positives = 141/214 (65%), Gaps = 3/214 (1%)
Frame = -2
Query: 634 KMLPRKRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALK 455
++L +KR DS P L ++E +Y +I ++ G+ ++K++ +P+++V K+LK
Sbjct: 3 RLLGQKRKQTDSKSPAESLTEQERILYNVIRNKQDMGIWTRDMKRET-SLPDNVVNKSLK 61
Query: 454 SLQAKNHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHI 275
LQAKN IKEV ++++K +K YMA EFEPSKEI GG WY +G LD I+IL++QC I
Sbjct: 62 VLQAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGTWYVEGNLDTEFIQILKEQCTKQI 121
Query: 274 KKFKVATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTG 95
K KVAT+E + ++I+ V N+++T QQI EIV +VLD + ELKS G+G F+ +P G
Sbjct: 122 YKLKVATLEGITDSIKRSGVLNVELTKQQIDEIVKALVLDNEIIELKSNGMGEFASIPVG 181
Query: 94 KDCYRILEGREG---PKESALVSMACGVCPRISE 2
K CY+ + G PK A+ S+ CGVCPRI +
Sbjct: 182 KICYKCISKGSGGGEPKIGAMASIPCGVCPRIHQ 215
>ref|XP_006427248.1| DNA-directed RNA polymerase III subunit RPC6 [Citrus clementina]
ref|XP_024036378.1| DNA-directed RNA polymerase III subunit RPC6 [Citrus clementina]
gb|ESR40488.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gb|KDO45213.1| hypothetical protein CISIN_1g026766mg [Citrus sinensis]
gb|KDO45214.1| hypothetical protein CISIN_1g026766mg [Citrus sinensis]
dbj|GAY63105.1| hypothetical protein CUMW_222970 [Citrus unshiu]
Length = 233
Score = 182 bits (463), Expect = 4e-54
Identities = 95/209 (45%), Positives = 139/209 (66%), Gaps = 4/209 (1%)
Frame = -2
Query: 619 KRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQA-IGIPESMVTKALKSLQA 443
KR PDS P L D E IY++I ++ G+ ++K++ + +P+++VTK++KSLQ
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 442 KNHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIKKFK 263
K+ IKEV ++ K KK MAVEFEPSKEI GG WY +G LD IK+++ QC+ I K K
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 262 VATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGKDCY 83
VAT+E + ++I+ F +D+T QQI EIV +VLD + E+KS G G F+++P GK CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 82 R-ILEGREG--PKESALVSMACGVCPRIS 5
+ + +G G PK +L S+ CGVCP+I+
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQIN 211
>ref|XP_021672680.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
brasiliensis]
ref|XP_021672688.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
brasiliensis]
Length = 236
Score = 182 bits (462), Expect = 7e-54
Identities = 96/210 (45%), Positives = 140/210 (66%), Gaps = 3/210 (1%)
Frame = -2
Query: 622 RKRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKSLQA 443
+KR DS P L + E +Y +I ++ G+ ++K++ +P+++V K+LK LQA
Sbjct: 7 QKRKQTDSNSPAQSLTEHERVLYNVIRSKQDMGIWTRDMKRET-NLPDNVVNKSLKVLQA 65
Query: 442 KNHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIKKFK 263
KN IKEV ++++K +K YMA+EFEPSKEI GG WY DG LD I+IL++QC I K K
Sbjct: 66 KNLIKEVVNIQNKGRKHYMAMEFEPSKEITGGAWYVDGNLDTEFIQILKEQCTKQIYKLK 125
Query: 262 VATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGKDCY 83
VAT+E + ++IR V N+++T QQI EIV +VLD + E+KS G+G F+ +P GK CY
Sbjct: 126 VATLEGVTDSIRRSGVLNVELTKQQIEEIVKALVLDDEIIEVKSNGMGEFASIPVGKICY 185
Query: 82 R-ILEGREG--PKESALVSMACGVCPRISE 2
+ I +G G PK A+ S+ CGVCPR+ +
Sbjct: 186 KCIRKGSIGGEPKTGAMASIPCGVCPRMRQ 215
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Citrus sinensis]
Length = 233
Score = 181 bits (459), Expect = 2e-53
Identities = 94/209 (44%), Positives = 139/209 (66%), Gaps = 4/209 (1%)
Frame = -2
Query: 619 KRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQA-IGIPESMVTKALKSLQA 443
KR P+S P L D E IY++I ++ G+ ++K++ + +P+++VTK++KSLQ
Sbjct: 3 KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 442 KNHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIKKFK 263
K+ IKEV ++ K KK MAVEFEPSKEI GG WY +G LD IK+++ QC+ I K K
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 262 VATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGKDCY 83
VAT+E + ++I+ F +D+T QQI EIV +VLD + E+KS G G F+++P GK CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 82 R-ILEGREG--PKESALVSMACGVCPRIS 5
+ + +G G PK +L S+ CGVCP+I+
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQIN 211
>ref|XP_021681807.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
brasiliensis]
Length = 236
Score = 179 bits (455), Expect = 8e-53
Identities = 94/210 (44%), Positives = 140/210 (66%), Gaps = 3/210 (1%)
Frame = -2
Query: 622 RKRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKSLQA 443
+KR DS P L ++E +Y +I ++ G+ ++K++ +P+++V K+LK LQA
Sbjct: 7 QKRKQTDSNSPAQSLTEQERILYNVIRSKQDMGIWTRDMKRET-NLPDNVVNKSLKVLQA 65
Query: 442 KNHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIKKFK 263
KN IKEV ++++K +K YMA EFEPSKEI GG WY +G LD I+IL++QC I K K
Sbjct: 66 KNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIQILKEQCTKQIYKLK 125
Query: 262 VATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGKDCY 83
VAT+E + ++I+ V N+++T QQI EI+ +VLD + ELKS G+G F+ +P GK CY
Sbjct: 126 VATLEGVTDSIKRSGVLNVELTKQQIDEILKALVLDNEIIELKSNGMGEFASIPVGKICY 185
Query: 82 R-ILEGREG--PKESALVSMACGVCPRISE 2
+ I +G G P+ A+ S+ CGVCPRI +
Sbjct: 186 KCISKGNIGGEPRTGAMASIPCGVCPRIRQ 215
>gb|OVA07786.1| RNA polymerase Rpc34 [Macleaya cordata]
Length = 236
Score = 179 bits (454), Expect = 1e-52
Identities = 96/206 (46%), Positives = 131/206 (63%)
Frame = -2
Query: 619 KRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKSLQAK 440
KR DS KL D E +Y+LI E+ G+ ++K + + E VTK+LKSL+ K
Sbjct: 11 KRKRVDSKATTQKLSDPERRLYDLIRSKEDMGIWKGDMKWET-KLLEPFVTKSLKSLKDK 69
Query: 439 NHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIKKFKV 260
IKEV ++ K KK +MAVEFEPS E+ GG WY +G LD I+IL++QCM HI K KV
Sbjct: 70 RLIKEVVNIHKKGKKYFMAVEFEPSMELTGGAWYVEGKLDTEFIQILKEQCMKHIYKLKV 129
Query: 259 ATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGKDCYR 80
ATVE + E+IR +F ++ T++QI EIV +VLD V +L STG G F+ +P G +CYR
Sbjct: 130 ATVEGITESIRKSGLFKVECTIKQIAEIVQTLVLDNEVVKLSSTGTGDFTHIPVGTECYR 189
Query: 79 ILEGREGPKESALVSMACGVCPRISE 2
P+ A+ S+ CGVCPRI++
Sbjct: 190 CSNKGGVPRTGAMASIPCGVCPRIND 215
>gb|OVA19488.1| RNA polymerase Rpc34 [Macleaya cordata]
Length = 236
Score = 178 bits (452), Expect = 2e-52
Identities = 95/206 (46%), Positives = 131/206 (63%)
Frame = -2
Query: 619 KRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKSLQAK 440
KR DS KL D E +Y+LI E+ G+ ++K + + E VTK+LKSL+ K
Sbjct: 11 KRKRVDSKATTQKLSDPERRLYDLIRSKEDMGIWKGDMKWET-KLLEPFVTKSLKSLKDK 69
Query: 439 NHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIKKFKV 260
IKEV ++ K KK +MAVEFEPS E+ GG WY +G LD I+IL++QCM HI K KV
Sbjct: 70 RLIKEVVNIHKKGKKYFMAVEFEPSMELTGGAWYVEGKLDTEFIQILKEQCMKHIYKLKV 129
Query: 259 ATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGKDCYR 80
ATVE + E+IR +F ++ T++QI EIV +VLD V ++ STG G F+ +P G +CYR
Sbjct: 130 ATVEGITESIRKSGLFKVECTIKQIAEIVQTLVLDNEVVKISSTGTGDFTHIPVGTECYR 189
Query: 79 ILEGREGPKESALVSMACGVCPRISE 2
P+ A+ S+ CGVCPRI++
Sbjct: 190 CSNKGGVPRTGAMASIPCGVCPRIND 215
>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
Length = 291
Score = 178 bits (452), Expect = 1e-51
Identities = 94/208 (45%), Positives = 138/208 (66%), Gaps = 3/208 (1%)
Frame = -2
Query: 619 KRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKSLQAK 440
KR P+ P L + E +Y++I ++ G+ ++KK+A +P+++V K+LK+L+ K
Sbjct: 63 KRKRPELNSPVQSLTEHERILYDVIRSKQDIGIWTRDMKKEA-KLPDNVVNKSLKALRVK 121
Query: 439 NHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIKKFKV 260
N IKEV ++++K +K +MA EFEPSKEI GG WY +G LD I+ LRQ C I+K V
Sbjct: 122 NLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLRQLCKRQIEKKGV 181
Query: 259 ATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGKDCYR 80
AT+E++ ++I FN+D+T QQI EI+ ++LD + E+KS G+G F+ +P GK CYR
Sbjct: 182 ATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSNGMGEFASIPFGKVCYR 241
Query: 79 -ILEGREG--PKESALVSMACGVCPRIS 5
I +G G PK AL S+ CGVCPRIS
Sbjct: 242 YISKGALGGEPKAGALASIPCGVCPRIS 269
>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Citrus sinensis]
Length = 234
Score = 176 bits (447), Expect = 1e-51
Identities = 94/210 (44%), Positives = 140/210 (66%), Gaps = 5/210 (2%)
Frame = -2
Query: 619 KRS*PDSGPPRPKLIDRESEIYELIIGSEES-GMLIAEVKKQA-IGIPESMVTKALKSLQ 446
KR PDS P L D E IY++I +++ G+ ++K++ + +P+++VTK++KSLQ
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62
Query: 445 AKNHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIKKF 266
K+ IKEV ++ +K KK MAVEFEPSKEI GG WY +G LD IK+++ QC+ I K
Sbjct: 63 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122
Query: 265 KVATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGKDC 86
KVAT+E + ++I+ F +D+T QQI EIV +VLD + E+KS G G F+++P GK C
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 182
Query: 85 YR-ILEGREG--PKESALVSMACGVCPRIS 5
Y+ + +G G PK + S+ CGVCP+I+
Sbjct: 183 YKNVSKGGGGGEPKTGSSASVPCGVCPQIN 212
>ref|XP_015872858.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ziziphus
jujuba]
Length = 238
Score = 176 bits (447), Expect = 1e-51
Identities = 92/210 (43%), Positives = 134/210 (63%), Gaps = 2/210 (0%)
Frame = -2
Query: 628 LPRKRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKSL 449
L KR PDS P L ++E +Y++I ++ G+ ++K++ +P+++V K+LKSL
Sbjct: 8 LALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRET-NLPDNVVNKSLKSL 66
Query: 448 QAKNHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIKK 269
QAK IKEV ++++K +K YMA EFEPSKEI GG WY +G LD I +L+ QC I K
Sbjct: 67 QAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQCAKIIYK 126
Query: 268 FKVATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGKD 89
+VATVE + + IR +F ++ + QQI EI+ +VLD V ++KS G+G F +P GK
Sbjct: 127 QRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDSIPVGKV 186
Query: 88 CYRILEG--REGPKESALVSMACGVCPRIS 5
CY+ R PK A+ S+ CGVCPRI+
Sbjct: 187 CYKCTNKGVRGEPKAGAMASIPCGVCPRIN 216
>gb|PNT51939.1| hypothetical protein POPTR_001G003700v3 [Populus trichocarpa]
Length = 307
Score = 178 bits (452), Expect = 2e-51
Identities = 94/208 (45%), Positives = 138/208 (66%), Gaps = 3/208 (1%)
Frame = -2
Query: 619 KRS*PDSGPPRPKLIDRESEIYELIIGSEESGMLIAEVKKQAIGIPESMVTKALKSLQAK 440
KR P+ P L + E +Y++I ++ G+ ++KK+A +P+++V K+LK+L+ K
Sbjct: 79 KRKRPELNSPVQSLTEHERILYDVIRSKQDIGIWTRDMKKEA-KLPDNVVNKSLKALRVK 137
Query: 439 NHIKEVASVKHKRKKIYMAVEFEPSKEI*GGEWYQDGVLDVPLIKILRQQCMNHIKKFKV 260
N IKEV ++++K +K +MA EFEPSKEI GG WY +G LD I+ LRQ C I+K V
Sbjct: 138 NLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLRQLCKRQIEKKGV 197
Query: 259 ATVEKLWEAIRGLHVFNMDITLQQIVEIVNLMVLDKGVEELKSTGVGVFSDVPTGKDCYR 80
AT+E++ ++I FN+D+T QQI EI+ ++LD + E+KS G+G F+ +P GK CYR
Sbjct: 198 ATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSNGMGEFASIPFGKVCYR 257
Query: 79 -ILEGREG--PKESALVSMACGVCPRIS 5
I +G G PK AL S+ CGVCPRIS
Sbjct: 258 YISKGALGGEPKAGALASIPCGVCPRIS 285