BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00014059
         (3793 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020276902.1| DNA-directed RNA polymerase III subunit 1 [A...  2057   0.0  
ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III s...  1834   0.0  
ref|XP_018682186.1| PREDICTED: DNA-directed RNA polymerase III s...  1820   0.0  
ref|XP_020113843.1| DNA-directed RNA polymerase III subunit 1 is...  1782   0.0  
ref|XP_020113844.1| DNA-directed RNA polymerase III subunit 1 is...  1781   0.0  
ref|XP_020113845.1| DNA-directed RNA polymerase III subunit 1 is...  1778   0.0  
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...  1740   0.0  
ref|XP_015636431.1| PREDICTED: DNA-directed RNA polymerase III s...  1735   0.0  
gb|OAY83936.1| DNA-directed RNA polymerase III subunit 1 [Ananas...  1726   0.0  
ref|XP_020687153.1| DNA-directed RNA polymerase III subunit 1 is...  1700   0.0  
ref|XP_002446717.1| DNA-directed RNA polymerase III subunit 1 [S...  1690   0.0  
gb|OVA18215.1| RNA polymerase [Macleaya cordata]                     1685   0.0  
ref|XP_008669237.1| DNA-directed RNA polymerase III subunit 1 [Z...  1682   0.0  
ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s...  1679   0.0  
gb|PKU65969.1| DNA-directed RNA polymerase II subunit RPB1 [Dend...  1678   0.0  
ref|XP_020575429.1| DNA-directed RNA polymerase III subunit 1 is...  1678   0.0  
gb|PAN38835.1| hypothetical protein PAHAL_G00721 [Panicum hallii]    1676   0.0  
gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria ital...  1675   0.0  
ref|XP_004976057.1| DNA-directed RNA polymerase III subunit 1 [S...  1675   0.0  
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s...  1674   0.0  

>ref|XP_020276902.1| DNA-directed RNA polymerase III subunit 1 [Asparagus officinalis]
 gb|ONK61062.1| uncharacterized protein A4U43_C08F25870 [Asparagus officinalis]
          Length = 1381

 Score = 2057 bits (5329), Expect = 0.0
 Identities = 1048/1220 (85%), Positives = 1106/1220 (90%), Gaps = 10/1220 (0%)
 Frame = -1

Query: 3787 CGHINGNVSKAKS-QLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLAL 3611
            CGH NG ++K KS QL++ E     VD+SLE   AALSHLKEK S+Q +H LTP  V  L
Sbjct: 170  CGHKNGVLAKGKSFQLSIIEKLEV-VDKSLE---AALSHLKEKPSYQHLHFLTPFDVFCL 225

Query: 3610 FKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQSNEDGLTAXXXXXXXXX 3431
            FKKMPDEDCELL+L VRPENLIVTE+AIPPAPIRPSV V SGQSNEDGLTA         
Sbjct: 226  FKKMPDEDCELLNLCVRPENLIVTEVAIPPAPIRPSVIVNSGQSNEDGLTAILKEVIQRN 285

Query: 3430 XXXREDLDGAA-PLYNCLE-CWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFR 3257
               RE ++GA+ P++NC++  W+ LQ  VV+YINSEAPSV ESKHRGL+QRLKGKQGRFR
Sbjct: 286  SRLREGIEGASVPMHNCMDRWWSELQDVVVKYINSEAPSVIESKHRGLIQRLKGKQGRFR 345

Query: 3256 CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPF 3077
            CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMA+VLTYPERVT HNIEKLRQCVRNGPF
Sbjct: 346  CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMARVLTYPERVTQHNIEKLRQCVRNGPF 405

Query: 3076 KHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 2897
            KHPGANFV LPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM
Sbjct: 406  KHPGANFVTLPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 465

Query: 2896 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKN 2717
            SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAF LMGVQNNLCTPKN
Sbjct: 466  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFTLMGVQNNLCTPKN 525

Query: 2716 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTG 2537
            GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGME IDLP PALIKPIELWTG
Sbjct: 526  GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMEVIDLPPPALIKPIELWTG 585

Query: 2536 KQLFSVLVRPNAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGN 2357
            KQLFSV+VRPNAQTRVFVN +VKERIHVKDTETMCP DGYVYFRNS+LICGQLGKVTLGN
Sbjct: 586  KQLFSVIVRPNAQTRVFVNFVVKERIHVKDTETMCPHDGYVYFRNSDLICGQLGKVTLGN 645

Query: 2356 GNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2177
            GNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI
Sbjct: 646  GNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 705

Query: 2176 DDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 1997
            DDGY RC SFI+LYENRKL L+PGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP
Sbjct: 706  DDGYGRCISFIELYENRKLKLRPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 765

Query: 1996 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANS 1817
            LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSK PAAKGFVANS
Sbjct: 766  LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKTPAAKGFVANS 825

Query: 1816 FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGI 1637
            FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK+LEDLSLYYDQTVRS++GG+
Sbjct: 826  FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSLYYDQTVRSSNGGV 885

Query: 1636 VQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKY 1457
            VQFIYGDDGMDPAKMEGENG PLNLDQLYKKV+ATCP +PQDSLSPS+I+ L+NERLSKY
Sbjct: 886  VQFIYGDDGMDPAKMEGENGTPLNLDQLYKKVMATCPCRPQDSLSPSEIICLINERLSKY 945

Query: 1456 DMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDGQMEDSGTLENVAANISGISA 1277
            DM+PE GCSSAFKNLL DFLHK VAELRKTR RL+LQED   E S  LENVAANISGISA
Sbjct: 946  DMTPEGGCSSAFKNLLLDFLHKHVAELRKTRIRLQLQED-HKETSSVLENVAANISGISA 1004

Query: 1276 KQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVP 1097
            +QL+VFMETCISRYHKKKLE             GEPGTQMTLKTFHFAGVASMNVTLGVP
Sbjct: 1005 QQLKVFMETCISRYHKKKLEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVP 1064

Query: 1096 RIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPYI 917
            RIKEIINAAKNISTPIITATLFCDD+EESARLVK EIE+T+LGEVAEAVK V KSN PYI
Sbjct: 1065 RIKEIINAAKNISTPIITATLFCDDKEESARLVKSEIERTLLGEVAEAVKTVLKSNHPYI 1124

Query: 916  SIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFP------- 758
            SI+ DKER+KTLHMEDS +SIKN+I +H++   +KLK E IT  G GNLRIFP       
Sbjct: 1125 SIVLDKERIKTLHMEDSLDSIKNSIVNHRN---LKLKAEDITFHGKGNLRIFPRGRNAKG 1181

Query: 757  PVSDRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGV 578
               D +RL+ EL+SL S+LPKVIVKGISTVDRAVINCQ+ KYNLLVEGTNLLAVMGTPGV
Sbjct: 1182 DNKDGSRLNSELHSLTSILPKVIVKGISTVDRAVINCQRGKYNLLVEGTNLLAVMGTPGV 1241

Query: 577  DASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVL 398
            DASKTKSNH+MEIWQTLGIEAAR  IISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVL
Sbjct: 1242 DASKTKSNHIMEIWQTLGIEAARQSIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVL 1301

Query: 397  GITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILK 218
            GITRFGMTKMKDS+LMLASFEKTSEHLFNASFN RDDQIEGVSECIIMGIPMQLGTGILK
Sbjct: 1302 GITRFGMTKMKDSVLMLASFEKTSEHLFNASFNHRDDQIEGVSECIIMGIPMQLGTGILK 1361

Query: 217  VRQRIEQLPEFKYGPDPIIC 158
            VRQR+EQLPE KYGP P+IC
Sbjct: 1362 VRQRVEQLPELKYGPGPVIC 1381


>ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Elaeis
            guineensis]
          Length = 1369

 Score = 1834 bits (4751), Expect = 0.0
 Identities = 920/1213 (75%), Positives = 1047/1213 (86%), Gaps = 2/1213 (0%)
 Frame = -1

Query: 3790 RCGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLAL 3611
            RCG+ NG V KA+S L   ++F  T D S+EE R+ALSH K+K SFQ  H+L+   VL+L
Sbjct: 161  RCGYANGVVKKARSGLYFIQDFSKTADPSVEEFRSALSHTKDKTSFQVSHVLSAVAVLSL 220

Query: 3610 FKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQS-NEDGLTAXXXXXXXX 3434
            F+KM DEDCELL+L  RPE LIVT IA+PP  IRPSV V SG+S NED +T+        
Sbjct: 221  FRKMLDEDCELLNLYDRPEKLIVTHIAVPPVSIRPSVIVDSGRSSNEDNITSILKNIINT 280

Query: 3433 XXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRC 3254
                REDL+GAAP + CL+CW  LQ  VVEYINSEAP +P+SKHRGLVQRLKGKQGRFR 
Sbjct: 281  NSILREDLEGAAPPFKCLDCWTHLQIQVVEYINSEAPCIPDSKHRGLVQRLKGKQGRFRG 340

Query: 3253 NLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFK 3074
            NLSGKRVEFTGRTVISPDPNLKITEVAIPILMA+VLTYPERV+++NIEKLRQ VRNGP K
Sbjct: 341  NLSGKRVEFTGRTVISPDPNLKITEVAIPILMARVLTYPERVSNYNIEKLRQLVRNGPSK 400

Query: 3073 HPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMS 2894
            +PGANFV+ PDG+++HL+YV+K+++ANELKYG VVERHLEDGDIVLFNRQPSLHRMSIM 
Sbjct: 401  YPGANFVLRPDGSKVHLRYVDKRDIANELKYGYVVERHLEDGDIVLFNRQPSLHRMSIMC 460

Query: 2893 HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNG 2714
            HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNG
Sbjct: 461  HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNG 520

Query: 2713 EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGK 2534
            EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSY+GD M+ IDLPTPA+IKPIELWTGK
Sbjct: 521  EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDAMDPIDLPTPAIIKPIELWTGK 580

Query: 2533 QLFSVLVRPNAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNG 2354
            QLF+VL+RPNA TRVF+NLIVKE+I+ K +ETMCP DG VYFRNSELICGQLGK TLGNG
Sbjct: 581  QLFNVLIRPNANTRVFLNLIVKEKIYSK-SETMCPNDGCVYFRNSELICGQLGKATLGNG 639

Query: 2353 NKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTID 2174
            NK+GLF+VLLRDYN   AASCMNRLAKLSARWIGNHGFSIGIDDVQPGE LNQQK+  I+
Sbjct: 640  NKDGLFAVLLRDYNPHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGENLNQQKRKKIN 699

Query: 2173 DGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPL 1994
            +GYR C   I  Y   +L L+PG NAA+TLE++IT VLN+IR TAG+VCM ELHWRNSPL
Sbjct: 700  EGYRECHGHISSYSKGELILQPGCNAAQTLELKITGVLNQIRATAGNVCMNELHWRNSPL 759

Query: 1993 IMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSF 1814
            IMSQCGSKGS INISQM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSF
Sbjct: 760  IMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSF 819

Query: 1813 YTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIV 1634
            YTGLT TEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS+YYDQTVR+ASG IV
Sbjct: 820  YTGLTPTEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQTVRTASGSIV 879

Query: 1633 QFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYD 1454
            QF+YGDDGMDPAKMEG++GIPLNLDQL+ K++ATCP + QD+LSP++I+ ++++RLSKYD
Sbjct: 880  QFVYGDDGMDPAKMEGKDGIPLNLDQLFMKIMATCPLREQDTLSPAEILHIMDDRLSKYD 939

Query: 1453 MSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QMEDSGTLENVAANISGISA 1277
            M+PE GCS++FK +LSDFLHKRVA L   R  L+L E+  Q +D   LE+VAANISGISA
Sbjct: 940  MTPEGGCSASFKKMLSDFLHKRVAALCNIRRALQLDENHLQKQDYSVLESVAANISGISA 999

Query: 1276 KQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVP 1097
            KQLQVF+ETCISRYH KK+E             GEPGTQMTLKTFHFAGVASMNVTLGVP
Sbjct: 1000 KQLQVFLETCISRYHLKKIEAGGAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVP 1059

Query: 1096 RIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPYI 917
            RIKEIINAAKNISTPIITATL  D    SAR+V+  ++KTVLGEVA+A+KIV KS+QPYI
Sbjct: 1060 RIKEIINAAKNISTPIITATLVSDRDVLSARMVRSSLQKTVLGEVAKAIKIVLKSSQPYI 1119

Query: 916  SIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNR 737
             +  D ER++ LHM  S +S++ AI +H    K KLK EHI + G   L+I+PP +DR++
Sbjct: 1120 VVKLDMERIEALHMRISSQSVQQAILNH---PKTKLKPEHIRVLGNNKLKIYPPEADRSK 1176

Query: 736  LHFELNSLKSMLPKVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTKS 557
            L FEL+SLK++LPKVIVKGI+TV+RAVIN     YNLLVEGTNLLAVMGTPG+D SKTKS
Sbjct: 1177 LQFELHSLKAVLPKVIVKGIATVERAVINHANGVYNLLVEGTNLLAVMGTPGIDGSKTKS 1236

Query: 556  NHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGM 377
            NH++E+ QT+GIEAAR CII+EIQ TM++HGMSIDARHMMLLAD+MTY+GEVLGITRFG+
Sbjct: 1237 NHIIEVQQTIGIEAARQCIINEIQYTMRNHGMSIDARHMMLLADLMTYRGEVLGITRFGI 1296

Query: 376  TKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQ 197
            +KMKDS+LMLASFEKT+EHLFNAS++GR+DQIEGVSECIIMGIPMQLGTGILKVRQR+EQ
Sbjct: 1297 SKMKDSVLMLASFEKTAEHLFNASYSGRNDQIEGVSECIIMGIPMQLGTGILKVRQRVEQ 1356

Query: 196  LPEFKYGPDPIIC 158
            LPE KY PDPIIC
Sbjct: 1357 LPELKYRPDPIIC 1369


>ref|XP_018682186.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Musa acuminata
            subsp. malaccensis]
 ref|XP_018682187.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Musa acuminata
            subsp. malaccensis]
          Length = 1372

 Score = 1820 bits (4715), Expect = 0.0
 Identities = 918/1213 (75%), Positives = 1040/1213 (85%), Gaps = 2/1213 (0%)
 Frame = -1

Query: 3793 PRCGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLA 3614
            P CG  NG V KA+S  A+A +F  +VDES+E  RAALSH+K K SFQ VH+L+P  VL+
Sbjct: 163  PWCGSRNGVVKKARSSFAIAHDFSRSVDESIEVVRAALSHIKAKSSFQIVHVLSPVTVLS 222

Query: 3613 LFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQS-NEDGLTAXXXXXXX 3437
            LFK+M DEDCELL+L  RP+ LIVT IA+PP  +RPSVFV  G+S NED +T        
Sbjct: 223  LFKRMVDEDCELLNLYDRPDKLIVTTIAVPPVAVRPSVFVDFGKSSNEDSITTILKNIIN 282

Query: 3436 XXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFR 3257
                 REDL+GAAP + CL+CW  LQ  VVEYINSEAPSVP+SKHRGL+QRLKGKQGRFR
Sbjct: 283  TNSILREDLEGAAPPFKCLDCWAHLQIQVVEYINSEAPSVPDSKHRGLIQRLKGKQGRFR 342

Query: 3256 CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPF 3077
             NLSGKRVEFTGRTVISPDPNLKITEVAIP+LMA+ LTYPERV+ +NIEKLRQ + NGP 
Sbjct: 343  GNLSGKRVEFTGRTVISPDPNLKITEVAIPVLMAKKLTYPERVSAYNIEKLRQRICNGPD 402

Query: 3076 KHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 2897
            K+PGANF++L DGT+ HL+YV+KK  A+ELKYG +VERHLEDGD+VLFNRQPSLHRMSIM
Sbjct: 403  KYPGANFILLGDGTKQHLRYVDKKTAASELKYGYIVERHLEDGDVVLFNRQPSLHRMSIM 462

Query: 2896 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKN 2717
             HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKN
Sbjct: 463  CHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 522

Query: 2716 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTG 2537
            GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSY+GD M+ IDLP+PA+IKPIELWTG
Sbjct: 523  GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDSMDPIDLPSPAIIKPIELWTG 582

Query: 2536 KQLFSVLVRPNAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGN 2357
            KQLFSVL+RPNA+T+VF+NL+VKE+I+ K +ETMCP DGYVYFRNSELICGQLGKVTLGN
Sbjct: 583  KQLFSVLIRPNARTKVFLNLMVKEKIYTK-SETMCPSDGYVYFRNSELICGQLGKVTLGN 641

Query: 2356 GNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2177
            GNK+GLFSVLLRDYNS  AASCMNRLAKLSARWIGNHGFSIGIDDVQPGE LNQQKK  I
Sbjct: 642  GNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNQQKKKKI 701

Query: 2176 DDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 1997
            D+GYR C   I LY   KLTL+PG NAA+TLE++IT VLN+IR  AG+VCM ELHWRNSP
Sbjct: 702  DEGYRECHELISLYGKGKLTLQPGCNAAQTLELKITGVLNQIRAIAGNVCMNELHWRNSP 761

Query: 1996 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANS 1817
            LIMSQCGSKGS INISQM++CVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANS
Sbjct: 762  LIMSQCGSKGSPINISQMVSCVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANS 821

Query: 1816 FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGI 1637
            FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS+YYD+TVR+ASGGI
Sbjct: 822  FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDETVRNASGGI 881

Query: 1636 VQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKY 1457
            VQF+YGDDGMDPAKMEG++GIPLN+DQL+ KV+ATCP +  D LSP++ + ++++RL+KY
Sbjct: 882  VQFLYGDDGMDPAKMEGKDGIPLNMDQLFMKVMATCPPREHDMLSPTEALRIMDDRLAKY 941

Query: 1456 DMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQE-DGQMEDSGTLENVAANISGIS 1280
            DMSPE GCS+AFK LLSDF+HKRV+ L   R  LKL E D   +DS  LENVAA ISGIS
Sbjct: 942  DMSPEGGCSAAFKKLLSDFVHKRVSALANMRKSLKLDETDMGRKDSTVLENVAAKISGIS 1001

Query: 1279 AKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGV 1100
            +KQL+VF+ETCISRYH KK+E             GEPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1002 SKQLEVFLETCISRYHSKKVEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1061

Query: 1099 PRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPY 920
            PRIKEIINA+KNISTPI+TATL       SAR+VK  IEKTVLGEVA+A+KIV KS++PY
Sbjct: 1062 PRIKEIINASKNISTPIVTATLLNGRDVLSARVVKSCIEKTVLGEVAKALKIVLKSSRPY 1121

Query: 919  ISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRN 740
            I +  D + ++ LHM  S ES+ ++I +H    KIKLK EHI   G   L+I+PP +DR 
Sbjct: 1122 IVVKLDMDLIEALHMRVSAESVCHSILNH---PKIKLKSEHINNIGSDKLKIYPPEADRR 1178

Query: 739  RLHFELNSLKSMLPKVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTK 560
            +L FE++SLK+MLPKVIVKGI TV+RAVIN     YNLLVEGTNLLAVMGTPG+DASKT+
Sbjct: 1179 KLQFEMHSLKAMLPKVIVKGIPTVERAVINETNGVYNLLVEGTNLLAVMGTPGIDASKTR 1238

Query: 559  SNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFG 380
            SNHV+E+ +TLGIEAAR CII+EIQ TM+ HGMSID RHMMLLAD+MTYKGEVLGITRFG
Sbjct: 1239 SNHVIEVQRTLGIEAARQCIINEIQYTMRGHGMSIDTRHMMLLADLMTYKGEVLGITRFG 1298

Query: 379  MTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIE 200
            ++KMK+S+LMLASFEKT+EHLFNAS+ GRDDQIEGVSECIIMGIPMQLGTGILKVRQR+E
Sbjct: 1299 ISKMKESVLMLASFEKTAEHLFNASYGGRDDQIEGVSECIIMGIPMQLGTGILKVRQRVE 1358

Query: 199  QLPEFKYGPDPII 161
            +LPE KY PDPII
Sbjct: 1359 KLPELKYAPDPII 1371


>ref|XP_020113843.1| DNA-directed RNA polymerase III subunit 1 isoform X1 [Ananas comosus]
          Length = 1377

 Score = 1782 bits (4616), Expect = 0.0
 Identities = 899/1214 (74%), Positives = 1027/1214 (84%), Gaps = 3/1214 (0%)
 Frame = -1

Query: 3793 PRCGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLA 3614
            PRCG  NG V KA++ LA+A++F  +VDES EE R+ALSH K+K SFQ  H++TP    A
Sbjct: 163  PRCGSSNGVVKKARTGLAIAQHFTKSVDESAEEIRSALSHKKDKQSFQAAHVITPGAAFA 222

Query: 3613 LFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQ-SNEDGLTAXXXXXXX 3437
            LFK+M DEDCE+L+L  RPE LIVTEIA+PPA IRPS FVG G+ SNED +T+       
Sbjct: 223  LFKRMLDEDCEVLNLYDRPEKLIVTEIAVPPATIRPSGFVGFGRTSNEDSITSILKNIIN 282

Query: 3436 XXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFR 3257
                 REDL+G AP   C++CW  LQ  VVEYINS++PSVPESKHRGL+QRLKGKQGRFR
Sbjct: 283  TNSILREDLEGGAPASKCIDCWTHLQIQVVEYINSDSPSVPESKHRGLIQRLKGKQGRFR 342

Query: 3256 CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPF 3077
             NLSGKRVE+TGRTVISPDPNLKITEVAIP+LMA VLTYPERV+++NIEKLRQC+ NGP 
Sbjct: 343  GNLSGKRVEYTGRTVISPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPD 402

Query: 3076 KHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 2897
            K+PGANFV  PDG+ +HLKYV KK VAN+LKYG +VERHLEDGDIVLFNRQPSLHRMSIM
Sbjct: 403  KYPGANFVQKPDGSTMHLKYVNKKIVANDLKYGDIVERHLEDGDIVLFNRQPSLHRMSIM 462

Query: 2896 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKN 2717
             HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKN
Sbjct: 463  CHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 522

Query: 2716 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTG 2537
            GEILVASTQDFLTSSFLITRKDTFYDRA FSLMCSY+GD M+SIDLPTPALIKP+ELWTG
Sbjct: 523  GEILVASTQDFLTSSFLITRKDTFYDRATFSLMCSYMGDAMDSIDLPTPALIKPVELWTG 582

Query: 2536 KQLFSVLVRPNAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGN 2357
            KQLFSVLVRPNA TRVF+NLIVKE+I+  D ETMCP DGYVYFRNSELI GQLGKVTLGN
Sbjct: 583  KQLFSVLVRPNACTRVFLNLIVKEKIYT-DNETMCPCDGYVYFRNSELISGQLGKVTLGN 641

Query: 2356 GNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2177
            GNK+GLFSVLLRDYNS  AASCMNR+AKLSARWIGNHGFSIGIDDVQPGE LNQQKK  I
Sbjct: 642  GNKDGLFSVLLRDYNSHAAASCMNRVAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKKKI 701

Query: 2176 DDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 1997
            D+GYR C   I  Y   +LT +PG NAA+TLE++IT VLN+IR TAG+VCM  LHWRNSP
Sbjct: 702  DEGYRECHEHISSYSKGQLTCEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSP 761

Query: 1996 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANS 1817
            LIMSQCGSKGSAINISQM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANS
Sbjct: 762  LIMSQCGSKGSAINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANS 821

Query: 1816 FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGI 1637
            FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRL+K+LEDLS++YDQTVR+AS GI
Sbjct: 822  FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGI 881

Query: 1636 VQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKY 1457
            VQF+YGDDGMDPAKMEG++GIPLNL QL+ KV+ATCP +  D+LSPS+I+ ++++RLSK+
Sbjct: 882  VQFLYGDDGMDPAKMEGKDGIPLNLSQLFMKVMATCPHRVLDTLSPSEILQIMDDRLSKH 941

Query: 1456 DMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQED-GQMEDSGTLENVAANISGIS 1280
            DMSPE GCS+AFK LL+DF++ RV  +R TR  LKL ED  + +D    E +AANISGIS
Sbjct: 942  DMSPEGGCSAAFKKLLTDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGIS 1001

Query: 1279 AKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGV 1100
            +KQLQVF++ CISRYH KK+E             GEPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1002 SKQLQVFLDNCISRYHFKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1061

Query: 1099 PRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPY 920
            PRI+EIINAAKNI TPIITA L  D    SA +VKG IEKTVLGEVA+A++IV KS++PY
Sbjct: 1062 PRIREIINAAKNIKTPIITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPY 1121

Query: 919  ISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRN 740
            IS+  D   +K LHM  S +S++ +I +H    KIKLK EHI I     LRI+ P +D++
Sbjct: 1122 ISVKLDMGLIKALHMRISADSVQLSILNH---PKIKLKPEHIRILRSDKLRIYAPEADKS 1178

Query: 739  RLHFELNSLKSMLPKVIVKGISTVDRAVINCQKDK-YNLLVEGTNLLAVMGTPGVDASKT 563
            +L F L+SLK+MLPKVIVKGI T +R VI+  K   Y L +EGTNLLAVMGTPG+DA  T
Sbjct: 1179 QLQFSLHSLKAMLPKVIVKGIPTAERVVIDKTKQGIYKLFIEGTNLLAVMGTPGIDARNT 1238

Query: 562  KSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRF 383
            K NHV+E+ +TLG+EAAR  II EI DTM++HGMSID RHMMLLADVMTYKGEVLGITRF
Sbjct: 1239 KINHVIEVHETLGVEAARQSIIDEIHDTMRNHGMSIDKRHMMLLADVMTYKGEVLGITRF 1298

Query: 382  GMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRI 203
            G+ KMK S+LMLASFEKT+EHLFNAS++GR+D+I+GVSECIIMGIPM+LGTGILKV+QR+
Sbjct: 1299 GIAKMKTSVLMLASFEKTAEHLFNASYSGREDKIDGVSECIIMGIPMRLGTGILKVKQRL 1358

Query: 202  EQLPEFKYGPDPII 161
            EQ+P+FKY P P++
Sbjct: 1359 EQIPDFKYVPGPVL 1372


>ref|XP_020113844.1| DNA-directed RNA polymerase III subunit 1 isoform X2 [Ananas comosus]
          Length = 1377

 Score = 1781 bits (4612), Expect = 0.0
 Identities = 898/1214 (73%), Positives = 1027/1214 (84%), Gaps = 3/1214 (0%)
 Frame = -1

Query: 3793 PRCGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLA 3614
            PRCG  NG V KA++ LA+A++F  +VDES EE R+ALSH K+K SFQ  H++TP    A
Sbjct: 163  PRCGSSNGVVKKARTGLAIAQHFTKSVDESAEEIRSALSHKKDKQSFQAAHVITPGAAFA 222

Query: 3613 LFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQ-SNEDGLTAXXXXXXX 3437
            LFK+M DEDCE+L+L  RPE LIVTEIA+PPA IRPS FVG G+ SNED +T+       
Sbjct: 223  LFKRMLDEDCEVLNLYDRPEKLIVTEIAVPPATIRPSGFVGFGRTSNEDSITSILKNIIN 282

Query: 3436 XXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFR 3257
                 REDL+G AP   C++CW  LQ  VVEYINS++PSVPESKHRGL+QRLKGKQGRFR
Sbjct: 283  TNSILREDLEGGAPASKCIDCWTHLQIQVVEYINSDSPSVPESKHRGLIQRLKGKQGRFR 342

Query: 3256 CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPF 3077
             NLSGKRVE+TGRTVISPDPNLKITEVAIP+LMA VLTYPERV+++NIEKLRQC+ NGP 
Sbjct: 343  GNLSGKRVEYTGRTVISPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPD 402

Query: 3076 KHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 2897
            K+PGANFV  PDG+ +HLKYV KK VAN+LKYG +VERHLEDGDIVLFNRQPSLHRMSIM
Sbjct: 403  KYPGANFVQKPDGSTMHLKYVNKKIVANDLKYGDIVERHLEDGDIVLFNRQPSLHRMSIM 462

Query: 2896 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKN 2717
             HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKN
Sbjct: 463  CHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 522

Query: 2716 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTG 2537
            GEILVASTQDFLTSSFLITRKDTFYDRA FSLMCS++GD M+SIDLPTPALIKP+ELWTG
Sbjct: 523  GEILVASTQDFLTSSFLITRKDTFYDRATFSLMCSFMGDAMDSIDLPTPALIKPVELWTG 582

Query: 2536 KQLFSVLVRPNAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGN 2357
            KQLFSVLVRPNA TRVF+NLIVKE+I+  D ETMCP DGYVYFRNSELI GQLGKVTLGN
Sbjct: 583  KQLFSVLVRPNACTRVFLNLIVKEKIYT-DNETMCPCDGYVYFRNSELISGQLGKVTLGN 641

Query: 2356 GNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2177
            GNK+GLFSVLLRDYNS  AASCMNR+AKLSARWIGNHGFSIGIDDVQPGE LNQQKK  I
Sbjct: 642  GNKDGLFSVLLRDYNSHAAASCMNRVAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKKKI 701

Query: 2176 DDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 1997
            D+GYR C   I  Y   +LT +PG NAA+TLE++IT VLN+IR TAG+VCM  LHWRNSP
Sbjct: 702  DEGYRECHEHISSYSKGQLTCEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSP 761

Query: 1996 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANS 1817
            LIMSQCGSKGSAINISQM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANS
Sbjct: 762  LIMSQCGSKGSAINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANS 821

Query: 1816 FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGI 1637
            FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRL+K+LEDLS++YDQTVR+AS GI
Sbjct: 822  FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGI 881

Query: 1636 VQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKY 1457
            VQF+YGDDGMDPAKMEG++GIPLNL QL+ KV+ATCP +  D+LSPS+I+ ++++RLSK+
Sbjct: 882  VQFLYGDDGMDPAKMEGKDGIPLNLSQLFMKVMATCPHRVLDTLSPSEILQIMDDRLSKH 941

Query: 1456 DMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQED-GQMEDSGTLENVAANISGIS 1280
            DMSPE GCS+AFK LL+DF++ RV  +R TR  LKL ED  + +D    E +AANISGIS
Sbjct: 942  DMSPEGGCSAAFKKLLTDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGIS 1001

Query: 1279 AKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGV 1100
            +KQLQVF++ CISRYH KK+E             GEPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1002 SKQLQVFLDNCISRYHFKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1061

Query: 1099 PRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPY 920
            PRI+EIINAAKNI TPIITA L  D    SA +VKG IEKTVLGEVA+A++IV KS++PY
Sbjct: 1062 PRIREIINAAKNIKTPIITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPY 1121

Query: 919  ISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRN 740
            IS+  D   +K LHM  S +S++ +I +H    KIKLK EHI I     LRI+ P +D++
Sbjct: 1122 ISVKLDMGLIKALHMRISADSVQLSILNH---PKIKLKPEHIRILRSDKLRIYAPEADKS 1178

Query: 739  RLHFELNSLKSMLPKVIVKGISTVDRAVINCQKDK-YNLLVEGTNLLAVMGTPGVDASKT 563
            +L F L+SLK+MLPKVIVKGI T +R VI+  K   Y L +EGTNLLAVMGTPG+DA  T
Sbjct: 1179 QLQFSLHSLKAMLPKVIVKGIPTAERVVIDKTKQGIYKLFIEGTNLLAVMGTPGIDARNT 1238

Query: 562  KSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRF 383
            K NHV+E+ +TLG+EAAR  II EI DTM++HGMSID RHMMLLADVMTYKGEVLGITRF
Sbjct: 1239 KINHVIEVHETLGVEAARQSIIDEIHDTMRNHGMSIDKRHMMLLADVMTYKGEVLGITRF 1298

Query: 382  GMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRI 203
            G+ KMK S+LMLASFEKT+EHLFNAS++GR+D+I+GVSECIIMGIPM+LGTGILKV+QR+
Sbjct: 1299 GIAKMKTSVLMLASFEKTAEHLFNASYSGREDKIDGVSECIIMGIPMRLGTGILKVKQRL 1358

Query: 202  EQLPEFKYGPDPII 161
            EQ+P+FKY P P++
Sbjct: 1359 EQIPDFKYVPGPVL 1372


>ref|XP_020113845.1| DNA-directed RNA polymerase III subunit 1 isoform X3 [Ananas comosus]
          Length = 1377

 Score = 1778 bits (4604), Expect = 0.0
 Identities = 897/1214 (73%), Positives = 1026/1214 (84%), Gaps = 3/1214 (0%)
 Frame = -1

Query: 3793 PRCGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLA 3614
            PRCG  NG V KA++ LA+A++F  +VDES EE R+ALSH K+K SFQ  H++TP    A
Sbjct: 163  PRCGSSNGVVKKARTGLAIAQHFTKSVDESAEEIRSALSHKKDKQSFQAAHVITPGAAFA 222

Query: 3613 LFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQ-SNEDGLTAXXXXXXX 3437
            LFK+M DEDCE+L+L  RPE LIVTEIA+PPA IRPS FVG G+ SNED +T+       
Sbjct: 223  LFKRMLDEDCEVLNLYDRPEKLIVTEIAVPPATIRPSGFVGFGRTSNEDSITSILKNIIN 282

Query: 3436 XXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFR 3257
                 REDL+G AP   C++CW  LQ  VVEYINS++PSVPESKHRGL+QRLKGKQGRFR
Sbjct: 283  TNSILREDLEGGAPASKCIDCWTHLQIQVVEYINSDSPSVPESKHRGLIQRLKGKQGRFR 342

Query: 3256 CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPF 3077
             NLSGKRVE+TGRTVISPDPNLKITEVAIP+LMA VLTYPERV+++NIEKLRQC+ NGP 
Sbjct: 343  GNLSGKRVEYTGRTVISPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPD 402

Query: 3076 KHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 2897
            K+PGANFV  PDG+ +HLKYV KK VAN+LKYG +VERHLEDGDIVLFNRQPSLHRMSIM
Sbjct: 403  KYPGANFVQKPDGSTMHLKYVNKKIVANDLKYGDIVERHLEDGDIVLFNRQPSLHRMSIM 462

Query: 2896 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKN 2717
             HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKN
Sbjct: 463  CHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 522

Query: 2716 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTG 2537
            GEILVASTQDFLTSSFLITRKDTFYDRA FSLMCS++GD M+SIDLPTPALIKP+ELWTG
Sbjct: 523  GEILVASTQDFLTSSFLITRKDTFYDRATFSLMCSFMGDAMDSIDLPTPALIKPVELWTG 582

Query: 2536 KQLFSVLVRPNAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGN 2357
            KQLFSVLVRPNA TRVF+NL VKE+I+  + ETMCP DGYVYFRNSELI GQLGKVTLGN
Sbjct: 583  KQLFSVLVRPNACTRVFLNLTVKEKIYTAN-ETMCPCDGYVYFRNSELISGQLGKVTLGN 641

Query: 2356 GNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2177
            GNK+GLFSVLLRDYNS  AASCMNRLAKLSARWIGNHGFSIGIDDVQPGE LNQQKK  I
Sbjct: 642  GNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKKKI 701

Query: 2176 DDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 1997
            D+GYR C   I  Y   +LT +PG NAA+TLE++IT VLN+IR TAG+VCM  LHWRNSP
Sbjct: 702  DEGYRECHEHISSYSKGQLTCEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSP 761

Query: 1996 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANS 1817
            LIMSQCGSKGSAINISQM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANS
Sbjct: 762  LIMSQCGSKGSAINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANS 821

Query: 1816 FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGI 1637
            FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRL+K+LEDLS++YDQTVR+AS GI
Sbjct: 822  FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGI 881

Query: 1636 VQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKY 1457
            VQF+YGDDGMDPAKMEG++GIPLNL QL+ KV+ATCP +  D+LSPS+I+ ++++RLSK+
Sbjct: 882  VQFLYGDDGMDPAKMEGKDGIPLNLSQLFMKVMATCPHRVLDTLSPSEILQIMDDRLSKH 941

Query: 1456 DMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQED-GQMEDSGTLENVAANISGIS 1280
            DMSPE GCS+AFK LL+DF++ RV  +R TR  LKL ED  + +D    E +AANISGIS
Sbjct: 942  DMSPEGGCSAAFKKLLTDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGIS 1001

Query: 1279 AKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGV 1100
            +KQLQVF++ CISRYH KK+E             GEPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1002 SKQLQVFLDNCISRYHFKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1061

Query: 1099 PRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPY 920
            PRI+EIINAAKNI TPIITA L  D    SA +VKG IEKTVLGEVA+A++IV KS++PY
Sbjct: 1062 PRIREIINAAKNIKTPIITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPY 1121

Query: 919  ISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRN 740
            IS+  D   +K LHM  S +S++ +I +H    KIKLK EHI I     LRI+ P +D++
Sbjct: 1122 ISVKLDMGLIKALHMRISADSVQLSILNH---PKIKLKPEHIRILRSDKLRIYAPEADKS 1178

Query: 739  RLHFELNSLKSMLPKVIVKGISTVDRAVINCQKDK-YNLLVEGTNLLAVMGTPGVDASKT 563
            +L F L+SLK+MLPKVIVKGI T +R VI+  K   Y L +EGTNLLAVMGTPG+DA  T
Sbjct: 1179 QLQFSLHSLKAMLPKVIVKGIPTAERVVIDKTKQGIYKLFIEGTNLLAVMGTPGIDARNT 1238

Query: 562  KSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRF 383
            K NHV+E+ +TLG+EAAR  II EI DTM++HGMSID RHMMLLADVMTYKGEVLGITRF
Sbjct: 1239 KINHVIEVHETLGVEAARQSIIDEIHDTMRNHGMSIDKRHMMLLADVMTYKGEVLGITRF 1298

Query: 382  GMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRI 203
            G+ KMK S+LMLASFEKT+EHLFNAS++GR+D+I+GVSECIIMGIPM+LGTGILKV+QR+
Sbjct: 1299 GIAKMKTSVLMLASFEKTAEHLFNASYSGREDKIDGVSECIIMGIPMRLGTGILKVKQRL 1358

Query: 202  EQLPEFKYGPDPII 161
            EQ+P+FKY P P++
Sbjct: 1359 EQIPDFKYVPGPVL 1372


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Oryza
            brachyantha]
          Length = 1389

 Score = 1740 bits (4507), Expect = 0.0
 Identities = 869/1229 (70%), Positives = 1012/1229 (82%), Gaps = 18/1229 (1%)
 Frame = -1

Query: 3793 PRCGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLA 3614
            P CG ING   K ++ L +  +   T+D S EE + ALSH KEK+SF  VH+L P+ VL+
Sbjct: 163  PWCGFINGVAKKGRAGLIILHDCSKTLDGSTEELKEALSHKKEKLSFSAVHMLDPATVLS 222

Query: 3613 LFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQ-SNEDGLTAXXXXXXX 3437
            LFK+M DEDCELL+LG RPE LIVTEIA+PP PIRPSVFV  G+ SNED +T        
Sbjct: 223  LFKRMTDEDCELLNLGDRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIAN 282

Query: 3436 XXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFR 3257
                 +E+L        C +CW  LQ  VVEYINS+APS+PES+HRGLVQRLKGK GRFR
Sbjct: 283  TNSILKENLQTGGQFMKCFDCWQHLQLQVVEYINSDAPSLPESQHRGLVQRLKGKTGRFR 342

Query: 3256 CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPF 3077
             NLSGKR E+TGRTVISPDPNL+ITEVAIPILMA+VLTYPERV+++NIEKLRQC+RNGP 
Sbjct: 343  GNLSGKRTEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPH 402

Query: 3076 KHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 2897
            KHPGANF+I  DGT+LHLKY +++  A +LKYGCVVERHLEDGDIVLFNRQPSLHRMSIM
Sbjct: 403  KHPGANFIIQTDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 462

Query: 2896 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKN 2717
            SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKN
Sbjct: 463  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 522

Query: 2716 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTG 2537
            GEILVASTQDFLTSSFL+TRKD FYDR++F+L+CSY+GD ME+IDLPTPAL+KPIELWTG
Sbjct: 523  GEILVASTQDFLTSSFLVTRKDNFYDRSSFTLLCSYLGDAMENIDLPTPALVKPIELWTG 582

Query: 2536 KQLFSVLVRPNAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGN 2357
            KQLFSVLVRPNA T+VF+NL VKE+I+ K  ETMCP DG+VYFRNSEL+ GQ+GK TLGN
Sbjct: 583  KQLFSVLVRPNACTKVFLNLTVKEKIYSKSRETMCPNDGFVYFRNSELLSGQVGKKTLGN 642

Query: 2356 GNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2177
            GNK+G+FS+L+RDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDV+PGE L+QQKK  I
Sbjct: 643  GNKDGMFSILVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVRPGEHLDQQKKKKI 702

Query: 2176 DDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 1997
            D+GY+ C   I  +    LTL+PG NAA+TLE +IT VLN+IR+ AG++CM  LHWRNSP
Sbjct: 703  DEGYKECHDLITSFSKGALTLQPGCNAAQTLEHKITHVLNKIREAAGNICMDTLHWRNSP 762

Query: 1996 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANS 1817
            LIMSQCGSKGS INISQM+ CVGQQSVGG RAPNGFIDRTLPHFPI SK PAAKGFVANS
Sbjct: 763  LIMSQCGSKGSPINISQMVVCVGQQSVGGHRAPNGFIDRTLPHFPINSKTPAAKGFVANS 822

Query: 1816 FYTGLT-----------------ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALE 1688
            FY GLT                 ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LE
Sbjct: 823  FYNGLTATEFFFHTMGGIYIVLPATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLE 882

Query: 1687 DLSLYYDQTVRSASGGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDS 1508
            DLS++YDQTVR+ASGGIVQF+YGDDGMDPAKMEGE+G PLNLDQL+ KV+ATCP++ Q++
Sbjct: 883  DLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGEDGKPLNLDQLFMKVMATCPQRGQNT 942

Query: 1507 LSPSKIVDLVNERLSKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDGQME 1328
            LSP +I+ ++N++LS++D S +DGCS  FK LL DFL  R+  L+ TR  L L E+   +
Sbjct: 943  LSPGEILQILNDKLSEHDASSDDGCSEKFKQLLKDFLEDRIKLLKSTRRALCLDENHVGK 1002

Query: 1327 DSGTLENVAANISGISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLK 1148
            DS   E++AANISGISAKQLQVF++TC+SRYH KK+E             GEPGTQMTLK
Sbjct: 1003 DSSIEESIAANISGISAKQLQVFLDTCLSRYHSKKIEAGASIGAIGAQSIGEPGTQMTLK 1062

Query: 1147 TFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLG 968
            TFHFAGVASMNVTLGVPRIKEIINAAK ISTPIITA L       SAR+VKG +EK VLG
Sbjct: 1063 TFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLSGKDVLSARVVKGSMEKAVLG 1122

Query: 967  EVAEAVKIVFKSNQPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITI 788
            EVAE +KIV KS+QP + +  D +R++ LHM  S +S++ +I +H    +IKLK EH+ +
Sbjct: 1123 EVAEDIKIVLKSSQPNLVVKLDMQRIEDLHMGISADSVQLSILNH---PRIKLKSEHVRV 1179

Query: 787  RGMGNLRIFPPVSDRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQKDKYNLLVEGTN 608
                 LR++P   D+++L +EL++LKSMLPKVIVKGI TV+RAVI+   DKY+LLVEGTN
Sbjct: 1180 IDKAKLRVYPTAIDKSKLLYELHNLKSMLPKVIVKGIPTVERAVISQTGDKYSLLVEGTN 1239

Query: 607  LLAVMGTPGVDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLA 428
            LLAVMGTPGVDA KTKSNH+ME+ +TLGIEAAR  II EIQ TM SHGM+ID+RHMMLLA
Sbjct: 1240 LLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMTSHGMNIDSRHMMLLA 1299

Query: 427  DVMTYKGEVLGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGI 248
            D+MTYKGE+LGITR+G+ KMK S+LMLASFEKT+EHLFNAS++GR+DQIEGVSECIIMGI
Sbjct: 1300 DLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGI 1359

Query: 247  PMQLGTGILKVRQRIEQLPEFKYGPDPII 161
            PMQLGTGILKVRQR++ LPEFKY PDPI+
Sbjct: 1360 PMQLGTGILKVRQRLDHLPEFKYQPDPIL 1388


>ref|XP_015636431.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Oryza sativa
            Japonica Group]
 emb|CAE02045.2| OJ990528_30.3 [Oryza sativa Japonica Group]
 emb|CAD41360.2| OSJNBa0076N16.24 [Oryza sativa Japonica Group]
 dbj|BAF15089.1| Os04g0492300 [Oryza sativa Japonica Group]
 emb|CAH67354.1| OSIGBa0130B08.14 [Oryza sativa]
 emb|CAH67535.1| H0425E08.3 [Oryza sativa]
 dbj|BAH00234.1| unnamed protein product [Oryza sativa Japonica Group]
 gb|EEC77539.1| hypothetical protein OsI_16437 [Oryza sativa Indica Group]
 dbj|BAS89853.1| Os04g0492300 [Oryza sativa Japonica Group]
          Length = 1383

 Score = 1735 bits (4493), Expect = 0.0
 Identities = 878/1223 (71%), Positives = 1009/1223 (82%), Gaps = 12/1223 (0%)
 Frame = -1

Query: 3793 PRCGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLA 3614
            P CG ING   K ++ L +  +   T+D S EE R ALSH KEK+S   V +L P+ VL+
Sbjct: 163  PWCGFINGVAKKGRAGLIILHDCSKTLDGSTEELRDALSHKKEKLSISAVRMLDPAIVLS 222

Query: 3613 LFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQ-SNEDGLTAXXXXXXX 3437
            LFK+M DEDCELL+LG RPE LIVTEIA+PP PIRPSVFV  G+ SNED +T        
Sbjct: 223  LFKRMTDEDCELLNLGDRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIAN 282

Query: 3436 XXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFR 3257
                 +E+L        C +CW  LQ  VVEYINS+APS+PES+HRGLVQRLKGK GRFR
Sbjct: 283  TNSILKENLQTGGQFMKCFDCWQHLQLQVVEYINSDAPSLPESQHRGLVQRLKGKTGRFR 342

Query: 3256 CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPF 3077
             NLSGKR E+TGRTVISPDPNL+ITEVAIPILMA+VLTYPERV+++NIEKLRQC+RNGP 
Sbjct: 343  GNLSGKRTEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPH 402

Query: 3076 KHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 2897
            KHPGANF+I PDGT+LHLKY +++  A +LKYGCVVERHLEDGDIVLFNRQPSLHRMSIM
Sbjct: 403  KHPGANFIIQPDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 462

Query: 2896 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKN 2717
            SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKN
Sbjct: 463  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 522

Query: 2716 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTG 2537
            GEILVASTQDFLTSSFL+TRKD FYDR++FSL+CSY+GD ME+IDLPTPALIKPIELWTG
Sbjct: 523  GEILVASTQDFLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTG 582

Query: 2536 KQLFSVLVRPNAQTRVFVNLIVKERIH------VKDTETMCPRDGYVYFRNSELICGQLG 2375
            KQLFSVLVRPNA T+VF+NL VKE+I+        + E MCP DG+VYFRNSEL+ GQ+G
Sbjct: 583  KQLFSVLVRPNACTKVFLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVG 642

Query: 2374 KVTLGNGNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQ 2195
            K TLGNGNK+G+FS L+RDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LNQ
Sbjct: 643  KATLGNGNKDGMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQ 702

Query: 2194 QKKMTIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKEL 2015
            +KKM ID GY+ C   I  Y    L L+PG NAA+TLE  IT VLNEIR+ AG VCM  L
Sbjct: 703  EKKMKIDGGYKDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTL 762

Query: 2014 HWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAK 1835
            HWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAK
Sbjct: 763  HWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAK 822

Query: 1834 GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVR 1655
            GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR
Sbjct: 823  GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVR 882

Query: 1654 SASGGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVN 1475
            +ASGGIVQF+YGDDGMDPAKMEG++G PLNLDQL+ KV+ATCP++ Q++LSP +I+ ++N
Sbjct: 883  NASGGIVQFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILN 942

Query: 1474 ERLSKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDGQME-DSGTLENVAA 1298
            ++LS++D S +DGCS  FK LL+ FL  R+  L+ TR  L L ED   E  S   E++AA
Sbjct: 943  DKLSEHDASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAA 1002

Query: 1297 NISGISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASM 1118
            NISGIS KQLQVF++TC+SRYH KK+E             GEPGTQMTLKTFHFAGVASM
Sbjct: 1003 NISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1062

Query: 1117 NVTLGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVF 938
            NVTLGVPRIKEIINAAK ISTPIITA L  +    SAR+VKG +EK VLGEVAEA+KIV 
Sbjct: 1063 NVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVL 1122

Query: 937  KSNQPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFP 758
            KS+QP + +  D +R++ LHM  S +S++ +I +H    KIKLK EH+ +     LRI+P
Sbjct: 1123 KSSQPNLVVKLDMQRIEALHMGISADSVQLSILNH---PKIKLKSEHVRVIDKSKLRIYP 1179

Query: 757  PVSDRNRLHFELNSLKSMLPKVIVKGISTVDRAVIN---CQKDK-YNLLVEGTNLLAVMG 590
               D+++L +EL+ LKSMLPKVIVKGI TV+RAVI+    + DK Y LLVEGTNLLAVMG
Sbjct: 1180 AGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVISETGEENDKRYKLLVEGTNLLAVMG 1239

Query: 589  TPGVDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYK 410
            TPGVDA KTKSNH+ME+ +TLGIEAAR  II EIQ TMKSHGM+ID+RHMMLLAD+MTYK
Sbjct: 1240 TPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYK 1299

Query: 409  GEVLGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGT 230
            GE+LGITR+G+ KMK S+LMLASFEKT+EHLFNAS++GR+DQIEGVSECIIMGIPMQLGT
Sbjct: 1300 GEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGT 1359

Query: 229  GILKVRQRIEQLPEFKYGPDPII 161
            GILKVRQR++ LPEFKY PDPI+
Sbjct: 1360 GILKVRQRLDHLPEFKYQPDPIL 1382


>gb|OAY83936.1| DNA-directed RNA polymerase III subunit 1 [Ananas comosus]
          Length = 1412

 Score = 1726 bits (4471), Expect = 0.0
 Identities = 880/1221 (72%), Positives = 1006/1221 (82%), Gaps = 10/1221 (0%)
 Frame = -1

Query: 3793 PRCGHIN-------GNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLL 3635
            PRCG  N       G V KA++ LA+A++F  +VDES EE R+ALSH K+K SFQ  H++
Sbjct: 163  PRCGSSNVYIIGNTGVVKKARTGLAIAQHFTKSVDESAEEIRSALSHKKDKQSFQAAHVI 222

Query: 3634 TPSKVLALFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQ-SNEDGLTA 3458
            TP    ALFK+M DEDCELL L  RPE LIVTEIA+PPAPIRPS FVG G+ SNED +T+
Sbjct: 223  TPGAAFALFKRMLDEDCELLDLYDRPEKLIVTEIAVPPAPIRPSGFVGFGRTSNEDSITS 282

Query: 3457 XXXXXXXXXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLK 3278
                        REDL+G AP   C++CW  LQ  VVEYINS++PSVPESKHRGL+QRLK
Sbjct: 283  ILKNIINTNSILREDLEGGAPASKCIDCWTHLQIQVVEYINSDSPSVPESKHRGLIQRLK 342

Query: 3277 GKQGRFRCNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQ 3098
            GKQGRFR NLSGKRVE+TGRTVISPDPNLKITEVAIP+LMA VLTYPERV+++NIEKLRQ
Sbjct: 343  GKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQ 402

Query: 3097 CVRNGPFKHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPS 2918
            C+ NGP K+PGANFV  PDG+  HLKYV KK VAN+LKYG +VERHLEDGDI        
Sbjct: 403  CILNGPDKYPGANFVQKPDGSTTHLKYVNKKIVANDLKYGDIVERHLEDGDI-------- 454

Query: 2917 LHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQN 2738
                      ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQN
Sbjct: 455  ----------ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQN 504

Query: 2737 NLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIK 2558
            NLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRA FSLMCS++GD M+SIDLPTPALIK
Sbjct: 505  NLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRATFSLMCSFMGDAMDSIDLPTPALIK 564

Query: 2557 PIELWTGKQLFSVLVRPNAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQL 2378
            P+ELWTGKQLFSVLVRPNA TRVF+NL VKE+I+  D ETMCP DGYVYFRNSELI GQL
Sbjct: 565  PVELWTGKQLFSVLVRPNACTRVFLNLTVKEKIYT-DNETMCPCDGYVYFRNSELISGQL 623

Query: 2377 GKVTLGNGNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLN 2198
            GKVTLGNGNK+GLFSVLLRDYNS  AASCMNRLAKLSARWIGNHGFSIGIDDVQPGE LN
Sbjct: 624  GKVTLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEYLN 683

Query: 2197 QQKKMTIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKE 2018
            QQKK  ID+GYR C   I  Y   +L  +PG NAA+TLE++IT VLN+IR TAG+VCM  
Sbjct: 684  QQKKRKIDEGYRECHEHISSYSKGQLACEPGYNAAQTLELKITSVLNQIRTTAGNVCMNT 743

Query: 2017 LHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAA 1838
            LHWRNSPLIMSQCGSKGSAINISQM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAA
Sbjct: 744  LHWRNSPLIMSQCGSKGSAINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAA 803

Query: 1837 KGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTV 1658
            KGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRL+K+LEDLS++YDQTV
Sbjct: 804  KGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTV 863

Query: 1657 RSASGGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLV 1478
            R+AS GIVQF+YGDDGMDPAKMEG++GIPLNL QL+ KV+ATCP +  D+LSPS+I+ ++
Sbjct: 864  RNASSGIVQFLYGDDGMDPAKMEGKDGIPLNLSQLFMKVMATCPHRVLDTLSPSEILQIM 923

Query: 1477 NERLSKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQED-GQMEDSGTLENVA 1301
            ++RLSK+DMSPE GCS+AFK LL+DF++ RV  +R TR  LKL ED  + +D    E +A
Sbjct: 924  DDRLSKHDMSPEGGCSAAFKKLLTDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIA 983

Query: 1300 ANISGISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVAS 1121
            ANISGIS+KQLQVF++TCISRYH KK+E             GEPGTQMTLKTFHFAGVAS
Sbjct: 984  ANISGISSKQLQVFLDTCISRYHFKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1043

Query: 1120 MNVTLGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIV 941
            MNVTLGVPRI+EIINAAKNI TPIITA L  D    SA +VKG IEKTVLGEVA+A++IV
Sbjct: 1044 MNVTLGVPRIREIINAAKNIKTPIITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIV 1103

Query: 940  FKSNQPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIF 761
             KS++PYIS+  D   +K LHM  S +S++ +I +H    KIKLK EHI I     LRI+
Sbjct: 1104 IKSHRPYISVKLDMGLIKALHMRISADSVQLSILNH---PKIKLKPEHIRILRSDKLRIY 1160

Query: 760  PPVSDRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQKDK-YNLLVEGTNLLAVMGTP 584
             P +D+++L F L+SLK+MLPKVIVKGI T +R VI+  K   Y L +EGTNLLAVMGTP
Sbjct: 1161 APEADKSQLQFSLHSLKAMLPKVIVKGIPTAERVVIDKTKQGIYKLFIEGTNLLAVMGTP 1220

Query: 583  GVDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGE 404
            G+DA  TK NHV+E+ +TLG+EAAR  I+ EI DTM++HGMSID RHMMLLAD+MTYKGE
Sbjct: 1221 GIDARNTKINHVIEVHETLGVEAARQSIVDEIHDTMRNHGMSIDKRHMMLLADLMTYKGE 1280

Query: 403  VLGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGI 224
            VLGITRFG+ KMK S+LMLASFEKT+EHLFNAS++GR+D+I GVSECIIMGIPM+LGTG 
Sbjct: 1281 VLGITRFGIAKMKTSVLMLASFEKTAEHLFNASYSGREDKIHGVSECIIMGIPMRLGTGF 1340

Query: 223  LKVRQRIEQLPEFKYGPDPII 161
            LKV+QR+EQ+P+FKY P P++
Sbjct: 1341 LKVKQRLEQIPDFKYVPGPVL 1361


>ref|XP_020687153.1| DNA-directed RNA polymerase III subunit 1 isoform X1 [Dendrobium
            catenatum]
          Length = 1373

 Score = 1700 bits (4402), Expect = 0.0
 Identities = 857/1213 (70%), Positives = 995/1213 (82%), Gaps = 4/1213 (0%)
 Frame = -1

Query: 3787 CGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALF 3608
            CG+ NG V K  S L + E+F   +D S+ E R+ALSHLK+  SFQ +H+L P KVLALF
Sbjct: 164  CGYKNGVVKKLGSSLTIVEDFTRKIDGSMHEFRSALSHLKDGASFQLIHVLRPLKVLALF 223

Query: 3607 KKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQSNEDGLTAXXXXXXXXXX 3428
            K+M D+DCELL+L  RPE LI+T+IA+PP+PIRPSV + +G S E+ +T           
Sbjct: 224  KRMLDQDCELLNLNDRPEKLIITDIAVPPSPIRPSVIMDAGMSMENDITIILKGIVNTNS 283

Query: 3427 XXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNL 3248
              REDL+GAAPL+ CLECW+LLQ  V EYINSEAP VP++K+RGL+QRLKGKQGRFR NL
Sbjct: 284  ILREDLEGAAPLFKCLECWDLLQVQVAEYINSEAPCVPDNKNRGLIQRLKGKQGRFRGNL 343

Query: 3247 SGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHP 3068
            SGKRVEFTGRTVISPDPNLKITEVAIP +MAQ+LTYPERV  HNIEKLRQCVRNG FK+P
Sbjct: 344  SGKRVEFTGRTVISPDPNLKITEVAIPTVMAQILTYPERVYRHNIEKLRQCVRNGRFKYP 403

Query: 3067 GANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHR 2888
            GANF +L  G+ + LK+  +KNVAN+LKYG +V+RHLEDGD+VLFNRQPSLHRMS+M HR
Sbjct: 404  GANFAVLSSGSTMDLKFEGRKNVANDLKYGDIVQRHLEDGDVVLFNRQPSLHRMSLMCHR 463

Query: 2887 ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEI 2708
            ARIMPW+TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA  LMGVQNNLCTPKNGEI
Sbjct: 464  ARIMPWKTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALTLMGVQNNLCTPKNGEI 523

Query: 2707 LVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQL 2528
            LVASTQDFLTSSFLITRKDTFYDRA F+L+CSY+GDGMESIDLP PALIKP+ELWTGKQL
Sbjct: 524  LVASTQDFLTSSFLITRKDTFYDRANFALLCSYMGDGMESIDLPAPALIKPVELWTGKQL 583

Query: 2527 FSVLVRPNAQTRVFVNLIVKERIHVKD---TETMCPRDGYVYFRNSELICGQLGKVTLGN 2357
            F+VLVRPNA TRVF+NL VKE+   K    +ETMCPRDG+VYFRNSELICGQLGK TLGN
Sbjct: 584  FNVLVRPNASTRVFLNLTVKEKCFSKPQNLSETMCPRDGFVYFRNSELICGQLGKATLGN 643

Query: 2356 GNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2177
            G+K+GLFSVLLRDYN+  AASCM RLAKLSARWIGNHGFSIGIDDVQPGERL QQ K TI
Sbjct: 644  GSKDGLFSVLLRDYNAYAAASCMGRLAKLSARWIGNHGFSIGIDDVQPGERLIQQNKRTI 703

Query: 2176 DDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 1997
            DDG R C  FI  Y   +LTL+ G +AA+TLE++I +VLN+IR  AG+VCM ELHWRNSP
Sbjct: 704  DDGNRECLDFIAKYNKGELTLETGCDAAQTLELKIHDVLNKIRSAAGNVCMNELHWRNSP 763

Query: 1996 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANS 1817
            LIMSQCGSKGS INISQMIA VGQQSVGGRRAPNGFIDR LPHFPI SK P+AKGFVANS
Sbjct: 764  LIMSQCGSKGSPINISQMIALVGQQSVGGRRAPNGFIDRALPHFPINSKTPSAKGFVANS 823

Query: 1816 FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGI 1637
            FYTGLTATEFFFHTM GREGLVDTAVKTAETGYMSRRL+K +ED+SL+YD TVR ASG I
Sbjct: 824  FYTGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLVKGMEDISLHYDLTVRDASGAI 883

Query: 1636 VQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKY 1457
             QF+YGDDG+DPAKMEG+ G PLN DQLY KV+ATCP +  DSLSP++I+  +++R S+ 
Sbjct: 884  AQFLYGDDGLDPAKMEGKEGSPLNFDQLYMKVMATCPHRENDSLSPAEILQTLDKRFSRC 943

Query: 1456 DMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDGQM-EDSGTLENVAANISGIS 1280
            +M+PE GCSS FK  LSDF+ KR+  L++TR  L+L E+  + +     E ++  ISGIS
Sbjct: 944  EMAPEGGCSSEFKQKLSDFIQKRIVTLQQTRQALQLDENPAINKGCCKRETISTRISGIS 1003

Query: 1279 AKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGV 1100
            AKQL+VF+ETCISRY+ KKLE             GEPGTQMTLKTFHFAGVASMN+TLGV
Sbjct: 1004 AKQLEVFLETCISRYYLKKLEAGAAIGVIGAQSIGEPGTQMTLKTFHFAGVASMNITLGV 1063

Query: 1099 PRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPY 920
            PRIKEIINAAKNISTP+I   L       SAR+VKG +EKT LGEV++ +KIV K +Q Y
Sbjct: 1064 PRIKEIINAAKNISTPVIKTQLLSSSEALSARIVKGCLEKTTLGEVSKCIKIVLKPSQTY 1123

Query: 919  ISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRN 740
            IS++ D ER+++L M  S ES++ AI +H    +I LK EH+       L+I  P+  ++
Sbjct: 1124 ISVVLDMERIESLQMRISSESVRFAILNH---PRIGLKPEHVITMSSHKLKISMPLVHKD 1180

Query: 739  RLHFELNSLKSMLPKVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTK 560
            +L F L+S+ ++LPKVIVKGISTV RAVI   K+ Y+L VEGTN LAVMGTPGVDASKT 
Sbjct: 1181 QL-FPLHSMNTLLPKVIVKGISTVKRAVIKKDKELYSLFVEGTNYLAVMGTPGVDASKTT 1239

Query: 559  SNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFG 380
            +NHV+E+ QTLGIEAAR  II+EI+ TM  HGMSID RHM LLAD+MTYKGEVLG+TRFG
Sbjct: 1240 TNHVIEVCQTLGIEAARQTIINEIKFTMDGHGMSIDIRHMKLLADLMTYKGEVLGMTRFG 1299

Query: 379  MTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIE 200
            +TKMK+S+LMLASFEKTSEHLFN +++GRDD IEGVSE IIMGIPMQLGTGILKVRQR++
Sbjct: 1300 LTKMKNSVLMLASFEKTSEHLFNGAYSGRDDHIEGVSERIIMGIPMQLGTGILKVRQRVQ 1359

Query: 199  QLPEFKYGPDPII 161
             L E KYGPDPII
Sbjct: 1360 DLTELKYGPDPII 1372


>ref|XP_002446717.1| DNA-directed RNA polymerase III subunit 1 [Sorghum bicolor]
 gb|EES11045.1| hypothetical protein SORBI_3006G131200 [Sorghum bicolor]
          Length = 1391

 Score = 1690 bits (4377), Expect = 0.0
 Identities = 856/1231 (69%), Positives = 998/1231 (81%), Gaps = 20/1231 (1%)
 Frame = -1

Query: 3793 PRCGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLA 3614
            PRC + NG V K ++ L V  +    +D   EE + AL + KEKVS   V +L P+ VL+
Sbjct: 163  PRCDYRNGVVKKGRAGLIVVHDCSKVLDGHTEELKNALQNKKEKVSANSVRVLDPATVLS 222

Query: 3613 LFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQ-SNEDGLTAXXXXXXX 3437
            LF++M DEDCELL+LG RPE LIV+EIA+PP PIRPSV VGS + SNED +T        
Sbjct: 223  LFRRMTDEDCELLNLGDRPEKLIVSEIAVPPVPIRPSVVVGSSRTSNEDSITVILKSIVN 282

Query: 3436 XXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFR 3257
                 +E L    P   C +CW  LQ  VVEY+NS+AP +P+S+HRGLVQRLKGK GRFR
Sbjct: 283  TNSILKETLHTGGPFTKCFDCWQYLQLQVVEYVNSDAPCLPDSQHRGLVQRLKGKTGRFR 342

Query: 3256 CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPF 3077
             NLSGKR E+TGRTVISPDPNLKITEVAIP+LMA+VLTYPERV+++NIEKLRQC+RNGPF
Sbjct: 343  GNLSGKRTEYTGRTVISPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPF 402

Query: 3076 KHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 2897
            K+PGANFV  PDG +  LKY +++  A +LK GC+VERHLEDGD+VLFNRQPSLHRMSIM
Sbjct: 403  KYPGANFVTQPDGMKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIM 462

Query: 2896 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKN 2717
            SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKN
Sbjct: 463  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 522

Query: 2716 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTG 2537
            GEILVASTQDFLTSSFL+TRKDTFYDR++F+L+CSY+GD ME+IDLPTPALIKPIELWTG
Sbjct: 523  GEILVASTQDFLTSSFLVTRKDTFYDRSSFTLLCSYLGDAMENIDLPTPALIKPIELWTG 582

Query: 2536 KQLFSVLVRPNAQTRVFVNLIVKERIHVKDT-------------ETMCPRDGYVYFRNSE 2396
            KQLFSVLVRPNA TRVF+NL V+E+I+ K               ETMCP DGYVYFRNSE
Sbjct: 583  KQLFSVLVRPNAHTRVFLNLAVQEKIYSKKKGKKEAGEETMCGRETMCPNDGYVYFRNSE 642

Query: 2395 LICGQLGKVTLGNGNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQ 2216
            L+ GQ+GK TLGNGNK+GL+SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQ
Sbjct: 643  LLSGQVGKATLGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQ 702

Query: 2215 PGERLNQQKKMTIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAG 2036
            PGE LN+QKK  ID GY++C   I L+    L L PG NAA+TLE  IT VLNEIR  AG
Sbjct: 703  PGEHLNRQKKKEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAG 762

Query: 2035 DVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIK 1856
            +VCM  LHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GF++RTLPHFPI 
Sbjct: 763  NVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPIN 822

Query: 1855 SKFPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSL 1676
            SK PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS+
Sbjct: 823  SKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSV 882

Query: 1675 YYDQTVRSASGGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPS 1496
            +YDQTVR+ASGGIVQF+YGDDGMDPAKMEG++G+PLNLDQL+ KV+ATCP++  D+LSP 
Sbjct: 883  FYDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPE 942

Query: 1495 KIVDLVNERLSKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QMEDSG 1319
             I  ++ ++L ++D S + GCS  FK  L++FL KR+  ++ TR  L L ED  + +DS 
Sbjct: 943  AIKQMLEDKLLQHDTSSDGGCSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSC 1002

Query: 1318 TLENVAANISGISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFH 1139
              E+VAA ISGISAKQLQVF++TC+SRY  KK+E             GEPGTQMTLKTFH
Sbjct: 1003 VEESVAAIISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFH 1062

Query: 1138 FAGVASMNVTLGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVA 959
            FAGVASMNVTLGVPRIKEIINAA+ ISTPIITA L       SAR+VKG +EK VLGEVA
Sbjct: 1063 FAGVASMNVTLGVPRIKEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVA 1122

Query: 958  EAVKIVFKSNQPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGM 779
             A++IV KS+QP + +  D + +++LHM  S +S++ +I +H    KIKLK EH+ +   
Sbjct: 1123 VAIQIVLKSSQPNLIVKLDMQLIESLHMGISADSVQLSILNH---PKIKLKSEHVRVIDR 1179

Query: 778  GNLRIFPPVSDRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQK-----DKYNLLVEG 614
              LRI+P  +D+ +L  EL++LKS+LPKVIVKGI TV+R VI+  K     ++Y LLVEG
Sbjct: 1180 AKLRIYPAGTDKRKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVKNETERYQLLVEG 1239

Query: 613  TNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMML 434
            TNLLAVMGTPGVDA+KTKSNH+ME  QTLGIEAAR  II EIQ TMKSHGM+ID RHMML
Sbjct: 1240 TNLLAVMGTPGVDATKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMML 1299

Query: 433  LADVMTYKGEVLGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIM 254
            LAD+MTYKGE+LGITR+G+ KMK S+LMLASFEKTSEHLFNAS++GR+DQIEGVSECIIM
Sbjct: 1300 LADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDQIEGVSECIIM 1359

Query: 253  GIPMQLGTGILKVRQRIEQLPEFKYGPDPII 161
            GIPMQLGTGILKVRQR++ +PEFKY PDPI+
Sbjct: 1360 GIPMQLGTGILKVRQRLDHVPEFKYQPDPIL 1390


>gb|OVA18215.1| RNA polymerase [Macleaya cordata]
          Length = 1378

 Score = 1685 bits (4363), Expect = 0.0
 Identities = 859/1217 (70%), Positives = 988/1217 (81%), Gaps = 7/1217 (0%)
 Frame = -1

Query: 3790 RCGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKE-KVSFQPVHLLTPSKVLA 3614
            RCG++NG V KA S L +  + R+      +EC  A+SH K+ K SFQ V +L P +VL+
Sbjct: 167  RCGYVNGKVKKAGSILGIVHD-RSKHHGIYDECEKAISHTKQNKASFQIVQVLNPVRVLS 225

Query: 3613 LFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQ-SNEDGLTAXXXXXXX 3437
            LF++M DEDCELL+L  RPE LI+T+IA+PP  IRPSVFV  G+ SNED +++       
Sbjct: 226  LFRRMLDEDCELLYLSDRPEKLILTDIAVPPIAIRPSVFVDGGKNSNEDDISSKLNTIIQ 285

Query: 3436 XXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKH-----RGLVQRLKGK 3272
                 R+DL   +P   CL  W LLQ  V +YINS+   VP S       RG +QRLKGK
Sbjct: 286  ANTSLRQDLHCTSPTSKCLAAWELLQVEVAQYINSDVRGVPPSMQPTKPLRGFIQRLKGK 345

Query: 3271 QGRFRCNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCV 3092
            QGRFR NLSGKRVE+TGRTVISPDPNLKITEVAIPILMAQ+LTYPE V+ HNIEKLR+CV
Sbjct: 346  QGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPELVSQHNIEKLRKCV 405

Query: 3091 RNGPFKHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLH 2912
             NG  K+PGANF+  P+G   +L+Y + K +A ELKYG +VERHLEDGD+VLFNRQPSLH
Sbjct: 406  ANGAQKYPGANFIRYPNGNMSNLRYGKLKRIAEELKYGDIVERHLEDGDVVLFNRQPSLH 465

Query: 2911 RMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNL 2732
            RMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA MLMGVQNNL
Sbjct: 466  RMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNL 525

Query: 2731 CTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPI 2552
            CTPKNGEILVASTQDFLTSSFLITRKDTFYDRA+FSLMCSY+GDGM+SIDLPTPALIKP+
Sbjct: 526  CTPKNGEILVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGMDSIDLPTPALIKPV 585

Query: 2551 ELWTGKQLFSVLVRPNAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGK 2372
            ELWTGKQLFSVLVRP+A  RV++N  V E+ + K  ETMCP DG+VYFRNSELICGQLGK
Sbjct: 586  ELWTGKQLFSVLVRPHAHMRVYLNFTVLEKTYSKSGETMCPNDGFVYFRNSELICGQLGK 645

Query: 2371 VTLGNGNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQ 2192
             TLGNGNK+GLFSVLLRDYN+  AA+CMNRLAKLSARWIGNHGFSIG+DDVQPGE LN Q
Sbjct: 646  ATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGVDDVQPGELLNHQ 705

Query: 2191 KKMTIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELH 2012
            KK  I++GY  C   I  Y    L L+PG +AA+TLE EIT VLN+IR+T   VCM+ELH
Sbjct: 706  KKARIEEGYEACYELIRSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETTAKVCMEELH 765

Query: 2011 WRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKG 1832
            WRNSPLIMSQCGSKGS INISQMIACVGQQSVGGRRAPNGFIDR+LPHFP KSK PAAKG
Sbjct: 766  WRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKAPAAKG 825

Query: 1831 FVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRS 1652
            FVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+KALEDLS++YD TVR+
Sbjct: 826  FVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDNTVRN 885

Query: 1651 ASGGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNE 1472
            A+GG+VQF+YGDDGMDP+KMEG++G PLNL++LY KV ATCP +   SLSPS+I+  V+ 
Sbjct: 886  ANGGVVQFLYGDDGMDPSKMEGKSGTPLNLERLYMKVKATCPARAHASLSPSEILRFVDA 945

Query: 1471 RLSKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDGQMEDSGTLENVAANI 1292
            RLS++DM+PE GCS AFK  L DFL K +  L+ TR  L+L E+    DS  LE + ANI
Sbjct: 946  RLSRHDMTPEGGCSDAFKISLLDFLQKSITTLKNTRRGLQLDEEKNGLDS--LEKITANI 1003

Query: 1291 SGISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNV 1112
            SGI+ +QLQVF+ETCISRYH K++E             GEPGTQMTLKTFHFAGVASMNV
Sbjct: 1004 SGITLQQLQVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNV 1063

Query: 1111 TLGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKS 932
            TLGVPRIKEIIN A+NISTPIITATL C++  +SAR+VKG IEKTVLGEVA+++KIV  S
Sbjct: 1064 TLGVPRIKEIINGAQNISTPIITATLECNNDVKSARIVKGCIEKTVLGEVAKSMKIVLTS 1123

Query: 931  NQPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPV 752
             Q  I +  D ER++ L +  S  S++ +I  H    K KLK +H+ +     LRI PPV
Sbjct: 1124 RQASIIVTLDMERIQCLQLRISAYSVQQSILHH---PKAKLKLQHVEVLDDRKLRILPPV 1180

Query: 751  SDRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDA 572
             DR++LHFEL+SLKSMLPKVIVKGI TV+RAVIN  K KYNLLVEGTNL AVMGTPGVD 
Sbjct: 1181 GDRSKLHFELHSLKSMLPKVIVKGIPTVERAVINKDKGKYNLLVEGTNLRAVMGTPGVDG 1240

Query: 571  SKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGI 392
             KT SNH++E+  TLGIEAAR CII EIQ TM SHGMSID RHMMLLAD+MT KGEVLGI
Sbjct: 1241 CKTTSNHIIEVQGTLGIEAARKCIIDEIQYTMASHGMSIDIRHMMLLADLMTSKGEVLGI 1300

Query: 391  TRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVR 212
            TRFG+ KMK+S+LMLASFEKT++HLFNAS NGRDD+IEGVSECIIMGIPMQ+GTGILKVR
Sbjct: 1301 TRFGIQKMKESVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGILKVR 1360

Query: 211  QRIEQLPEFKYGPDPII 161
            QR+EQ+P+  YG DPII
Sbjct: 1361 QRLEQIPKLTYGLDPII 1377


>ref|XP_008669237.1| DNA-directed RNA polymerase III subunit 1 [Zea mays]
 gb|ONM16380.1| DNA-directed RNA polymerase III subunit 1 [Zea mays]
          Length = 1394

 Score = 1682 bits (4355), Expect = 0.0
 Identities = 854/1234 (69%), Positives = 996/1234 (80%), Gaps = 23/1234 (1%)
 Frame = -1

Query: 3793 PRCGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLA 3614
            PRC + NG V K ++ L V  +    +D   EE + AL + KEKVS   V +L P+ VL+
Sbjct: 163  PRCDYRNGVVKKGRAGLIVVHDCSKVLDGHTEELKNALQNKKEKVSASSVLVLDPATVLS 222

Query: 3613 LFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQ-SNEDGLTAXXXXXXX 3437
            LF++M DEDCELL+LG RPE LIVTEIA+PP PIRPSV VG+ + SNED +T        
Sbjct: 223  LFRRMIDEDCELLNLGDRPEKLIVTEIAVPPVPIRPSVVVGNSRTSNEDSITVILKSIVN 282

Query: 3436 XXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFR 3257
                 +E L    P   C +CW  LQ  VVEY+NS+APS+PES+HRGLVQRLKGK GRFR
Sbjct: 283  TNSILKETLHTGGPFTKCFDCWQYLQLQVVEYVNSDAPSLPESQHRGLVQRLKGKTGRFR 342

Query: 3256 CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPF 3077
             NLSGKR E+TGRTVISPDPNLKITEVAIP+LMA+VLTYPERV+++NIEKLRQC+RNGPF
Sbjct: 343  GNLSGKRTEYTGRTVISPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPF 402

Query: 3076 KHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 2897
            K+PGANFV  PDG +  LKY +++  A +LK GC+VERHLEDGD+VLFNRQPSLHRMSIM
Sbjct: 403  KYPGANFVTQPDGMKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIM 462

Query: 2896 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKN 2717
             HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKN
Sbjct: 463  CHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 522

Query: 2716 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTG 2537
            GEILVASTQDFLTSSFL+TRKDTFYDR++F+L+CSY+GDGME+IDLPTPALIKP+ELWTG
Sbjct: 523  GEILVASTQDFLTSSFLVTRKDTFYDRSSFTLLCSYLGDGMENIDLPTPALIKPVELWTG 582

Query: 2536 KQLFSVLVRPNAQTRVFVNLIVKERIH------------VKDT----ETMCPRDGYVYFR 2405
            KQLFSVLVRPNA T+VF+NL V+E+I+            VK+T    ETMCP DGYVYFR
Sbjct: 583  KQLFSVLVRPNAHTKVFLNLAVQEKIYSKKKGKKEGGEEVKETMCGRETMCPNDGYVYFR 642

Query: 2404 NSELICGQLGKVTLGNGNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGID 2225
            NSEL+ GQ+GK TLGNGNK+GL+SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+D
Sbjct: 643  NSELLSGQVGKATLGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVD 702

Query: 2224 DVQPGERLNQQKKMTIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRK 2045
            DVQPGE LN+QKK  ID GY++C   I L+    L L PG NAA+TLE  IT VLNEIR 
Sbjct: 703  DVQPGEHLNRQKKKEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRS 762

Query: 2044 TAGDVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHF 1865
             AG+VCM  LHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GF++RTLPHF
Sbjct: 763  IAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHF 822

Query: 1864 PIKSKFPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALED 1685
            PI SK PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LED
Sbjct: 823  PINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLED 882

Query: 1684 LSLYYDQTVRSASGGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSL 1505
            LS++YDQTVR+ASGGIVQF+YGDDGMDPAKMEG++G+PLNLDQL+ KV+ATCP++  D+L
Sbjct: 883  LSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTL 942

Query: 1504 SPSKIVDLVNERLSKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QME 1328
            SP  I  ++ ++  ++D S + GCS+ FK  L++FL KR+  ++ TR  L L ED  + +
Sbjct: 943  SPVGIKQMLEDKFLQHDTSSDGGCSAEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKK 1002

Query: 1327 DSGTLENVAANISGISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLK 1148
            DS   E++AA ISGISAKQLQVF++TC+SRY  KK+E             GEPGTQMTLK
Sbjct: 1003 DSCLEESIAAIISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLK 1062

Query: 1147 TFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLG 968
            TFHFAGVASMNVTLGVPRIKEIINAAK ISTPIITA L       SAR+VKG +EK VLG
Sbjct: 1063 TFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAQLLSRKDVLSARIVKGSMEKAVLG 1122

Query: 967  EVAEAVKIVFKSNQPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITI 788
            EVA  ++ V KS+ P + +  D + ++TLHM  S +S+K +I +H    K+KLK EH+ +
Sbjct: 1123 EVAATIQTVLKSSLPNLVVKLDMQLIETLHMGISADSVKLSILNH---PKLKLKSEHVRV 1179

Query: 787  RGMGNLRIFPPVSDRNRLHFELNSLKSMLPKVIVKGISTVDRAVI-----NCQKDKYNLL 623
                 LRI+P  +D+ +L  EL++LKS+LPKVIVKGI TV+R VI     N   ++Y LL
Sbjct: 1180 IDRAKLRIYPAGTDKLKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVNNATERYQLL 1239

Query: 622  VEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARH 443
            VEGTNLLAVMGTPGVDA KTKSNH+ME  QTLGIEAAR  II EIQ TMKSHGM+ID RH
Sbjct: 1240 VEGTNLLAVMGTPGVDARKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRH 1299

Query: 442  MMLLADVMTYKGEVLGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSEC 263
            MMLLAD+MTYKGE+LGITR+G+ KMK S+LMLASFEKT+EHLFNAS++GR DQIEGVSEC
Sbjct: 1300 MMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGRQDQIEGVSEC 1359

Query: 262  IIMGIPMQLGTGILKVRQRIEQLPEFKYGPDPII 161
            IIMGIPMQLGTGILKVRQR++ +PEFKY PDPI+
Sbjct: 1360 IIMGIPMQLGTGILKVRQRLDHVPEFKYQPDPIL 1393


>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Nelumbo
            nucifera]
          Length = 1392

 Score = 1679 bits (4348), Expect = 0.0
 Identities = 858/1225 (70%), Positives = 991/1225 (80%), Gaps = 15/1225 (1%)
 Frame = -1

Query: 3790 RCGHINGNVSKAKS------QLAVAENFRTTVDESLEECRAALSHLKE-KVSFQPVHLLT 3632
            RCG+ING V K  S       L +  +     DESLEEC +A+SH KE K SF+ VH+L 
Sbjct: 171  RCGYINGFVKKGASISGTGSTLGIVHDRSKVNDESLEECSSAISHKKESKASFRVVHVLN 230

Query: 3631 PSKVLALFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSG-QSNEDGLTAX 3455
            P ++LALFK+M DEDCELL+L  RPE LI+T+IA+PP  IRPSVF+ +G  SNED +T+ 
Sbjct: 231  PVRILALFKRMVDEDCELLYLYDRPEKLIITDIAVPPIAIRPSVFMDAGTMSNEDDITSK 290

Query: 3454 XXXXXXXXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKH-----RGLV 3290
                       R+DL GA P   CL  W+ LQ  V +YINS+   +P S       RG V
Sbjct: 291  LSAIIRANAPLRQDLQGANPKSKCLLDWDQLQIEVAQYINSDVRGIPTSMQPSKPLRGFV 350

Query: 3289 QRLKGKQGRFRCNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIE 3110
            QRLKGKQGRFR NLSGKRVE+TGRTVISPDPNLKITEVAIPILMAQ+LTYPERV+HHNIE
Sbjct: 351  QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSHHNIE 410

Query: 3109 KLRQCVRNGPFKHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFN 2930
            KLRQCVRNG  K+PGANF+  PDG+ ++L++  +K  A+ELKYG +VERHLEDGDIVLFN
Sbjct: 411  KLRQCVRNGSQKYPGANFIRYPDGSIMNLRFSARKRAADELKYGYIVERHLEDGDIVLFN 470

Query: 2929 RQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLM 2750
            RQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA MLM
Sbjct: 471  RQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLM 530

Query: 2749 GVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTP 2570
            GVQNNLCTPKNG ILVASTQDFLTS+FLITRKDTFYDRAAFSLMCSY+GDGM+ +DLPTP
Sbjct: 531  GVQNNLCTPKNGAILVASTQDFLTSAFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTP 590

Query: 2569 ALIKPIELWTGKQLFSVLVRPNAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELI 2390
            ALIKPIELWTGKQLFSVLVRP+A  RV++NL V E+  VK  ETMCP DG+VYFRNSELI
Sbjct: 591  ALIKPIELWTGKQLFSVLVRPHAHMRVYLNLTVLEKNCVKQKETMCPNDGFVYFRNSELI 650

Query: 2389 CGQLGKVTLGNGNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPG 2210
            CGQLGK TLGNGNK+GLFSVLLRDYN+  AASCMNR+AKLSARWIGNHGFSIGIDDVQPG
Sbjct: 651  CGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRIAKLSARWIGNHGFSIGIDDVQPG 710

Query: 2209 ERLNQQKKMTIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDV 2030
            E L  +KK TI+DGY+ C   I  Y    L L+PG +AA+TLE +IT  LNEIR+    V
Sbjct: 711  ELLKDKKKETIEDGYKACDELIHSYNKGNLELEPGCDAAQTLEAQITRKLNEIREETAAV 770

Query: 2029 CMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSK 1850
            CM+ELHWRNSPLIMSQCGSKGS INISQMIACVGQQSVGGRRAPNGFIDR+LPHFP KSK
Sbjct: 771  CMQELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSK 830

Query: 1849 FPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYY 1670
             PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+KALEDL++YY
Sbjct: 831  TPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLAVYY 890

Query: 1669 DQTVRSASGGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKI 1490
            D TVR+ASGG+VQF+YGDDG+DPA MEG+ GIPLNL+++Y K  ATCP     SL PS+I
Sbjct: 891  DDTVRNASGGVVQFLYGDDGLDPANMEGKKGIPLNLERVYLKTKATCPSGTNASLCPSEI 950

Query: 1489 VDLVNERLSKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQED-GQMEDSGTL 1313
            V ++++R+S+YDM+P+ GCSSAFK LL DF+  R++ LR TR  L L E+  + ++S  L
Sbjct: 951  VKILDDRISRYDMTPDGGCSSAFKKLLVDFIQNRISILRNTRKALGLDEEYAKKDNSDIL 1010

Query: 1312 ENVAANISGISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFHFA 1133
            E++AANISGI+ +QL+VF+ETCISRYH K++E             GEPGTQMTLKTFHFA
Sbjct: 1011 EHIAANISGITTQQLKVFLETCISRYHLKRIEAGAAIGAIGAQSIGEPGTQMTLKTFHFA 1070

Query: 1132 GVASMNVTLGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEA 953
            GVASMNVTLGVPRIKEIIN AKNISTPIITATL CDD  +SAR+VKG IEKTVLGEVA++
Sbjct: 1071 GVASMNVTLGVPRIKEIINGAKNISTPIITATLECDDNVKSARIVKGCIEKTVLGEVAKS 1130

Query: 952  VKIVFKSNQPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGN 773
            +KIV    Q  I I  D  R++   ++ S +S+K +I  H +    K K + +  +G   
Sbjct: 1131 IKIVMTQRQASIVISLDMARIEAAQLKISADSVKESILKHLN---PKFKPKIVVDKGY-K 1186

Query: 772  LRIFPPVSDRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQKD-KYNLLVEGTNLLAV 596
            L + P  SDR++LHFEL++LK++LP+VIVKGISTV RAVIN  KD KYNLLVEGTNLL V
Sbjct: 1187 LIVIPTESDRSKLHFELHNLKAVLPQVIVKGISTVQRAVINKSKDGKYNLLVEGTNLLGV 1246

Query: 595  MGTPGVDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMT 416
            MGTPGVD  KT SNH++E+  TLGIEAAR CII EIQ TM  HGM ID RHMMLLAD+MT
Sbjct: 1247 MGTPGVDGCKTTSNHIIEVQGTLGIEAARRCIIDEIQYTMGKHGMDIDIRHMMLLADLMT 1306

Query: 415  YKGEVLGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQL 236
            YKGEVLGITR G+ KMK+S+LMLASFEKT++HLFNAS NGRDD+IEGVSECII+GIPMQ+
Sbjct: 1307 YKGEVLGITRTGIQKMKESVLMLASFEKTADHLFNASVNGRDDKIEGVSECIILGIPMQI 1366

Query: 235  GTGILKVRQRIEQLPEFKYGPDPII 161
            GTGILKV QR  Q+P+  Y PDPII
Sbjct: 1367 GTGILKVIQRYPQVPQLSYKPDPII 1391


>gb|PKU65969.1| DNA-directed RNA polymerase II subunit RPB1 [Dendrobium catenatum]
          Length = 1395

 Score = 1678 bits (4346), Expect = 0.0
 Identities = 847/1204 (70%), Positives = 986/1204 (81%), Gaps = 4/1204 (0%)
 Frame = -1

Query: 3787 CGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALF 3608
            CG+ NG V K  S L + E+F   +D S+ E R+ALSHLK+  SFQ +H+L P KVLALF
Sbjct: 164  CGYKNGVVKKLGSSLTIVEDFTRKIDGSMHEFRSALSHLKDGASFQLIHVLRPLKVLALF 223

Query: 3607 KKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQSNEDGLTAXXXXXXXXXX 3428
            K+M D+DCELL+L  RPE LI+T+IA+PP+PIRPSV + +G S E+ +T           
Sbjct: 224  KRMLDQDCELLNLNDRPEKLIITDIAVPPSPIRPSVIMDAGMSMENDITIILKGIVNTNS 283

Query: 3427 XXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNL 3248
              REDL+GAAPL+ CLECW+LLQ  V EYINSEAP VP++K+RGL+QRLKGKQGRFR NL
Sbjct: 284  ILREDLEGAAPLFKCLECWDLLQVQVAEYINSEAPCVPDNKNRGLIQRLKGKQGRFRGNL 343

Query: 3247 SGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHP 3068
            SGKRVEFTGRTVISPDPNLKITEVAIP +MAQ+LTYPERV  HNIEKLRQCVRNG FK+P
Sbjct: 344  SGKRVEFTGRTVISPDPNLKITEVAIPTVMAQILTYPERVYRHNIEKLRQCVRNGRFKYP 403

Query: 3067 GANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHR 2888
            GANF +L  G+ + LK+  +KNVAN+LKYG +V+RHLEDGD+VLFNRQPSLHRMS+M HR
Sbjct: 404  GANFAVLSSGSTMDLKFEGRKNVANDLKYGDIVQRHLEDGDVVLFNRQPSLHRMSLMCHR 463

Query: 2887 ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEI 2708
            ARIMPW+TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA  LMGVQNNLCTPKNGEI
Sbjct: 464  ARIMPWKTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALTLMGVQNNLCTPKNGEI 523

Query: 2707 LVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQL 2528
            LVASTQDFLTSSFLITRKDTFYDRA F+L+CSY+GDGMESIDLP PALIKP+ELWTGKQL
Sbjct: 524  LVASTQDFLTSSFLITRKDTFYDRANFALLCSYMGDGMESIDLPAPALIKPVELWTGKQL 583

Query: 2527 FSVLVRPNAQTRVFVNLIVKERIHVKD---TETMCPRDGYVYFRNSELICGQLGKVTLGN 2357
            F+VLVRPNA TRVF+NL VKE+   K    +ETMCPRDG+VYFRNSELICGQLGK TLGN
Sbjct: 584  FNVLVRPNASTRVFLNLTVKEKCFSKPQNLSETMCPRDGFVYFRNSELICGQLGKATLGN 643

Query: 2356 GNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2177
            G+K+GLFSVLLRDYN+  AASCM RLAKLSARWIGNHGFSIGIDDVQPGERL QQ K TI
Sbjct: 644  GSKDGLFSVLLRDYNAYAAASCMGRLAKLSARWIGNHGFSIGIDDVQPGERLIQQNKRTI 703

Query: 2176 DDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 1997
            DDG R C  FI  Y   +LTL+ G +AA+TLE++I +VLN+IR  AG+VCM ELHWRNSP
Sbjct: 704  DDGNRECLDFIAKYNKGELTLETGCDAAQTLELKIHDVLNKIRSAAGNVCMNELHWRNSP 763

Query: 1996 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANS 1817
            LIMSQCGSKGS INISQMIA VGQQSVGGRRAPNGFIDR LPHFPI SK P+AKGFVANS
Sbjct: 764  LIMSQCGSKGSPINISQMIALVGQQSVGGRRAPNGFIDRALPHFPINSKTPSAKGFVANS 823

Query: 1816 FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGI 1637
            FYTGLTATEFFFHTM GREGLVDTAVKTAETGYMSRRL+K +ED+SL+YD TVR ASG I
Sbjct: 824  FYTGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLVKGMEDISLHYDLTVRDASGAI 883

Query: 1636 VQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKY 1457
             QF+YGDDG+DPAKMEG+ G PLN DQLY KV+ATCP +  DSLSP++I+  +++R S+ 
Sbjct: 884  AQFLYGDDGLDPAKMEGKEGSPLNFDQLYMKVMATCPHRENDSLSPAEILQTLDKRFSRC 943

Query: 1456 DMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDGQM-EDSGTLENVAANISGIS 1280
            +M+PE GCSS FK  LSDF+ KR+  L++TR  L+L E+  + +     E ++  ISGIS
Sbjct: 944  EMAPEGGCSSEFKQKLSDFIQKRIVTLQQTRQALQLDENPAINKGCCKRETISTRISGIS 1003

Query: 1279 AKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGV 1100
            AKQL+VF+ETCISRY+ KKLE             GEPGTQMTLKTFHFAGVASMN+TLGV
Sbjct: 1004 AKQLEVFLETCISRYYLKKLEAGAAIGVIGAQSIGEPGTQMTLKTFHFAGVASMNITLGV 1063

Query: 1099 PRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPY 920
            PRIKEIINAAKNISTP+I   L       SAR+VKG +EKT LGEV++ +KIV K +Q Y
Sbjct: 1064 PRIKEIINAAKNISTPVIKTQLLSSSEALSARIVKGCLEKTTLGEVSKCIKIVLKPSQTY 1123

Query: 919  ISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRN 740
            IS++ D ER+++L M  S ES++ AI +H    +I LK EH+       L+I  P+  ++
Sbjct: 1124 ISVVLDMERIESLQMRISSESVRFAILNH---PRIGLKPEHVITMSSHKLKISMPLVHKD 1180

Query: 739  RLHFELNSLKSMLPKVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTK 560
            +L F L+S+ ++LPKVIVKGISTV RAVI   K+ Y+L VEGTN LAVMGTPGVDASKT 
Sbjct: 1181 QL-FPLHSMNTLLPKVIVKGISTVKRAVIKKDKELYSLFVEGTNYLAVMGTPGVDASKTT 1239

Query: 559  SNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFG 380
            +NHV+E+ QTLGIEAAR  II+EI+ TM  HGMSID RHM LLAD+MTYKGEVLG+TRFG
Sbjct: 1240 TNHVIEVCQTLGIEAARQTIINEIKFTMDGHGMSIDIRHMKLLADLMTYKGEVLGMTRFG 1299

Query: 379  MTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIE 200
            +TKMK+S+LMLASFEKTSEHLFN +++GRDD IEGVSE IIMGIPMQLGTGILKVRQR  
Sbjct: 1300 LTKMKNSVLMLASFEKTSEHLFNGAYSGRDDHIEGVSERIIMGIPMQLGTGILKVRQRYA 1359

Query: 199  QLPE 188
            ++ +
Sbjct: 1360 EITQ 1363


>ref|XP_020575429.1| DNA-directed RNA polymerase III subunit 1 isoform X1 [Phalaenopsis
            equestris]
 ref|XP_020575430.1| DNA-directed RNA polymerase III subunit 1 isoform X1 [Phalaenopsis
            equestris]
          Length = 1379

 Score = 1678 bits (4345), Expect = 0.0
 Identities = 853/1218 (70%), Positives = 977/1218 (80%), Gaps = 9/1218 (0%)
 Frame = -1

Query: 3787 CGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALF 3608
            CG+ NG V K  S L + E+   T+D    E R ALSH+K+  SFQ ++ L P KVL+LF
Sbjct: 164  CGYKNGVVKKLGSSLTIVEDLTKTIDGRAYEIRVALSHMKDNASFQSINALRPLKVLSLF 223

Query: 3607 KKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQSNEDGLTAXXXXXXXXXX 3428
            K+M  EDCELL++  RPE  I+T+IA+PP+PIRPS  + S  SNED +TA          
Sbjct: 224  KRMLVEDCELLNMKDRPEKFIITDIAVPPSPIRPSALMDSEMSNEDDITAILKGIINTNS 283

Query: 3427 XXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNL 3248
              REDL+GAAPL+ CLECW+LLQ  V EYINSEAPSVP++K+RGL+QRLKGKQGRFR NL
Sbjct: 284  ILREDLEGAAPLFKCLECWDLLQVRVAEYINSEAPSVPDNKNRGLIQRLKGKQGRFRGNL 343

Query: 3247 SGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHP 3068
            SGKRVEFTGRTVISPDPNLKITEV IP LMAQ+LTYPERV+ HNIEKLRQ VRNG  K+P
Sbjct: 344  SGKRVEFTGRTVISPDPNLKITEVGIPTLMAQILTYPERVSCHNIEKLRQRVRNGRSKYP 403

Query: 3067 GANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHR 2888
            GANFV L  G+ + LKY  +KN+AN LKYG +V+RHLEDGD+VLFNRQPSLHRMS+M HR
Sbjct: 404  GANFVALSSGSTMDLKYGARKNIANNLKYGDIVQRHLEDGDVVLFNRQPSLHRMSLMCHR 463

Query: 2887 ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEI 2708
            A+IMPWRTLRFNESVCNPYNADFDGDEMNLHVPQ EEARTEA ML+GVQNNLCTPKNGEI
Sbjct: 464  AKIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQIEEARTEALMLLGVQNNLCTPKNGEI 523

Query: 2707 LVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQL 2528
            LVASTQDFLTSSFLITRKDTFYDRA F+LMCSY+GDGMESIDLP PALIKP+ELWTGKQL
Sbjct: 524  LVASTQDFLTSSFLITRKDTFYDRANFALMCSYMGDGMESIDLPAPALIKPVELWTGKQL 583

Query: 2527 FSVLVRPNAQTRVFVNLIVKERIHVKD---TETMCPRDGYVYFRNSELICGQLGKVTLGN 2357
            F+VLVRPNA TRVF+NL V E+   K     ETMCPRDG+VYFRNSELI GQLGK TLGN
Sbjct: 584  FNVLVRPNASTRVFLNLTVIEKGFSKPQNLCETMCPRDGFVYFRNSELISGQLGKATLGN 643

Query: 2356 GNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2177
            G K+GLFSVLLRDYN+  A +CMNRLAKLSARWIGNHGFSIGIDDVQPGERLN+QKK TI
Sbjct: 644  GGKDGLFSVLLRDYNAYAAVNCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNRQKKRTI 703

Query: 2176 DDG------YRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKEL 2015
            DDG         C  FI  Y   +LTL+ G +AA+TLE+EI  VLN+IR  AG+VCM EL
Sbjct: 704  DDGEXXXXXXXXCRDFITKYNKGELTLQTGCDAAQTLELEIYNVLNKIRSAAGNVCMDEL 763

Query: 2014 HWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAK 1835
            HWRNSPLIMSQCGSKGS INISQMIA VGQQSVGGRRAPNGFIDRTLPHFPI SK P+AK
Sbjct: 764  HWRNSPLIMSQCGSKGSPINISQMIALVGQQSVGGRRAPNGFIDRTLPHFPINSKTPSAK 823

Query: 1834 GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVR 1655
            GFVANSFYTGLTATEFFFHTM GREGLVDTAVKTAETGYMSRRL+K +ED+SL+YD TVR
Sbjct: 824  GFVANSFYTGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLVKGMEDVSLHYDITVR 883

Query: 1654 SASGGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVN 1475
             A GGIVQ +YGDDG+DPAKMEG+ G PLN DQLY KV+ATCP +  D LSP++I+  ++
Sbjct: 884  DACGGIVQLLYGDDGLDPAKMEGKEGNPLNFDQLYMKVMATCPHRDNDILSPAEILQTLH 943

Query: 1474 ERLSKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDGQMEDSGTLENVAAN 1295
             RL+  D+S E  CS  FK  LSDF+HK +   +KTR  L+L E+         ENVA  
Sbjct: 944  RRLACCDVSSEGCCSLEFKQKLSDFIHKCINRYQKTRQALQLDENSINGGCCKTENVATR 1003

Query: 1294 ISGISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMN 1115
            ISGISAKQL+VF+ETCISRYH KKLE             GEPGTQMTLKTFHFAGVASMN
Sbjct: 1004 ISGISAKQLEVFLETCISRYHLKKLEAGAAIGVIGAQSIGEPGTQMTLKTFHFAGVASMN 1063

Query: 1114 VTLGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFK 935
            +TLGVPRIKEIINA+KNISTP+I   L       SAR VKG +EKT LGEVA  +KIV K
Sbjct: 1064 ITLGVPRIKEIINASKNISTPMIKTQLLLSSEALSARTVKGCVEKTALGEVAICIKIVLK 1123

Query: 934  SNQPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPP 755
             +Q YIS++ D ER++ L M+ + ES++ +I +H    KI LK  H+   G   LRI+ P
Sbjct: 1124 PSQSYISVVLDMERIEALQMKITSESVRKSILNH---PKIGLKSNHVHTVGSKKLRIYSP 1180

Query: 754  VSDRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVD 575
             +D+N++   L+SL ++LPKVIVKGI TV RAVI   K  Y+L VEGTN LAVMGTPGVD
Sbjct: 1181 AADKNKIQLSLHSLLTLLPKVIVKGIPTVKRAVIKNDKGLYSLFVEGTNYLAVMGTPGVD 1240

Query: 574  ASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLG 395
            ASKT SNHV+E+ QTLGIEAAR  II+EI+ TM+ HGMSID RHM LLAD+MTYKGEVLG
Sbjct: 1241 ASKTTSNHVIEVRQTLGIEAARQTIINEIKFTMEGHGMSIDIRHMKLLADLMTYKGEVLG 1300

Query: 394  ITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKV 215
            +TR+G+TKMK S+LMLASFEKTS+HLFN S++GRDD I+GVSECIIMGIPM+LGTGILK+
Sbjct: 1301 MTRYGLTKMKSSVLMLASFEKTSDHLFNGSYSGRDDHIDGVSECIIMGIPMRLGTGILKL 1360

Query: 214  RQRIEQLPEFKYGPDPII 161
            RQR+E+LPE KYGPDPII
Sbjct: 1361 RQRVEELPELKYGPDPII 1378


>gb|PAN38835.1| hypothetical protein PAHAL_G00721 [Panicum hallii]
          Length = 1398

 Score = 1676 bits (4340), Expect = 0.0
 Identities = 855/1236 (69%), Positives = 992/1236 (80%), Gaps = 25/1236 (2%)
 Frame = -1

Query: 3793 PRCGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLA 3614
            PRC + NG V K ++ L V  +    +D   EE + AL H KEKVS   V +L P+ VL+
Sbjct: 166  PRCEYRNGVVKKGRAGLIVIHDCSKILDGHAEELKNALQHKKEKVSTSSVRMLDPATVLS 225

Query: 3613 LFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQ-SNEDGLTAXXXXXXX 3437
            LF++M DEDCELL+LG RPE LIVTEIA+PP PIRPSV VG+ + SNED +TA       
Sbjct: 226  LFRRMTDEDCELLNLGDRPEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVN 285

Query: 3436 XXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFR 3257
                 +E L        C +CW  LQ  VVEY+NS+AP +PES+HRGLVQRLKGK GRFR
Sbjct: 286  TNSILKETLQTGGLFNKCFDCWQQLQLQVVEYVNSDAPCLPESQHRGLVQRLKGKTGRFR 345

Query: 3256 CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPF 3077
             NLSGKR E+TGRTVISPDPNL+ITEVAIP+LMA+VLTYPERV+++N+EKLRQC+RNGP+
Sbjct: 346  GNLSGKRTEYTGRTVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPY 405

Query: 3076 KHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 2897
            KHPGANF+I PDGTRL LKY +++  A +LK G +VERHLEDGD+VLFNRQPSLHRMSIM
Sbjct: 406  KHPGANFIITPDGTRLSLKYGDRRIAARDLKCGYIVERHLEDGDVVLFNRQPSLHRMSIM 465

Query: 2896 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKN 2717
            SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKN
Sbjct: 466  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 525

Query: 2716 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTG 2537
            GEILVASTQDFLTSSFL+TRKDTFYDR++F+LMCSY+GD ME+IDLPTPALIKPIELWTG
Sbjct: 526  GEILVASTQDFLTSSFLVTRKDTFYDRSSFTLMCSYLGDAMENIDLPTPALIKPIELWTG 585

Query: 2536 KQLFSVLVRPNAQTRVFVNLIVKERIHVK----------------DTETMCPRDGYVYFR 2405
            KQLFSVLVRPNA+T+VF+NL VKE+I+ K                  ETMCP DGYVYFR
Sbjct: 586  KQLFSVLVRPNARTKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFR 645

Query: 2404 NSELICGQLGKVTLGNGNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGID 2225
            NSEL+ GQ+GK TLGNGNK+G++SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+D
Sbjct: 646  NSELLSGQVGKATLGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVD 705

Query: 2224 DVQPGERLNQQKKMTIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRK 2045
            DVQPGE LN+QKK  ID+GY++C   I L+    L L PG NAAETLE  IT VLNEIR 
Sbjct: 706  DVQPGEHLNRQKKKKIDEGYKQCHDLISLFAKGALALHPGCNAAETLEHRITGVLNEIRT 765

Query: 2044 TAGDVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHF 1865
             AG+VCM  LHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFIDRTLPHF
Sbjct: 766  AAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHF 825

Query: 1864 PIKSKFPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALED 1685
            PI SK PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LED
Sbjct: 826  PINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLED 885

Query: 1684 LSLYYDQTVRSASGGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSL 1505
            LS++YDQTVR+ASGGI+QF+YGDDGMDPAKMEG++G PLNLDQL+ KV ATCP++  D+L
Sbjct: 886  LSVFYDQTVRNASGGIIQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPQRGPDTL 945

Query: 1504 SPSKIVDLVNERLSKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDGQM-- 1331
            SP+ I  ++ ++L+++  S + GCS  F+  L +F  KR+  L  TR  L L + G +  
Sbjct: 946  SPADIRQMLEDKLTQHGTSSDGGCSQEFEKGLREFFEKRINLLECTRRALHL-DVGHVGK 1004

Query: 1330 EDSGTLENVAANISGISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTL 1151
            +DS   E VAANISGISAKQLQVF++TC SRYH K +E             GEPGTQMTL
Sbjct: 1005 KDSCIEEFVAANISGISAKQLQVFLDTCFSRYHSKTIEAGASIGAIGAQSIGEPGTQMTL 1064

Query: 1150 KTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVL 971
            KTFHFAGVASMNVTLGVPRIKEIINAAK ISTPIIT  L       SAR+VKG +EK VL
Sbjct: 1065 KTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVL 1124

Query: 970  GEVAEAVKIVFKSNQPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHIT 791
            GEVA  +KI+ K +Q  + +  D + ++ LHM  S ++++ +I  H    KIKLK EH+ 
Sbjct: 1125 GEVASDIKIILKPSQANLVVKLDMQLIEALHMGISADTVQLSILKH---PKIKLKPEHVR 1181

Query: 790  IRGMGNLRIFPPVSDRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQK------DKYN 629
            +     L+I+P  +D+++L  EL++LKSMLPKVIVKGI TV+R VI+  K      +KYN
Sbjct: 1182 VIDRAKLKIYPAGTDKSKLQLELHNLKSMLPKVIVKGIPTVERVVIDEIKKKDNTVEKYN 1241

Query: 628  LLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDA 449
            LLVEGTNLLAVMGTPGVDA  TKSNH+ME+  TLGIEAAR  II EIQ TMKSHGM+ID 
Sbjct: 1242 LLVEGTNLLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDV 1301

Query: 448  RHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVS 269
            RHMMLLAD+MTYKGEVLGITR+G+ KMK S+LMLASFEKTSEHLFNAS++GR+D+IEGVS
Sbjct: 1302 RHMMLLADLMTYKGEVLGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDEIEGVS 1361

Query: 268  ECIIMGIPMQLGTGILKVRQRIEQLPEFKYGPDPII 161
            ECIIMGIPMQLGTGILKVRQR+++LPEFKY PDPI+
Sbjct: 1362 ECIIMGIPMQLGTGILKVRQRLDRLPEFKYQPDPIL 1397


>gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria italica]
          Length = 1394

 Score = 1675 bits (4338), Expect = 0.0
 Identities = 851/1234 (68%), Positives = 989/1234 (80%), Gaps = 23/1234 (1%)
 Frame = -1

Query: 3793 PRCGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLA 3614
            PRC + NG V K +  L V  +    +D   EE + AL H KEKVS   V +L P+  L+
Sbjct: 163  PRCEYKNGVVKKGRVGLIVIHDCSKILDGHTEELKNALQHKKEKVSTSSVRMLDPATALS 222

Query: 3613 LFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQ-SNEDGLTAXXXXXXX 3437
            LF++M DEDCELL+LG RPE LIVTEIA+PP PIRPSV VG+ + SNED +TA       
Sbjct: 223  LFRRMVDEDCELLNLGDRPEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVN 282

Query: 3436 XXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFR 3257
                 +E L        C +CW  LQ  VVE++NS+AP +PES+HRGLVQRLKGK GRFR
Sbjct: 283  TNSILKETLQTGGLFSKCFDCWQQLQLQVVEFVNSDAPCLPESQHRGLVQRLKGKTGRFR 342

Query: 3256 CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPF 3077
             NLSGKR E+TGRTVISPDPNL+ITEVAIP+LMA+VLTYPERV+++N+EKLRQC+RNGP+
Sbjct: 343  GNLSGKRTEYTGRTVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPY 402

Query: 3076 KHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 2897
            KHPGANF+I PDGT+L LKY +++  A +LK G  VERHLEDGD+VLFNRQPSLHRMSIM
Sbjct: 403  KHPGANFIITPDGTKLSLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNRQPSLHRMSIM 462

Query: 2896 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKN 2717
            SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKN
Sbjct: 463  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 522

Query: 2716 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTG 2537
            GEILVASTQDFLTSSFL+TRKD FYDR++F+L+CSY+GD ME+IDLPTPALIKPIELWTG
Sbjct: 523  GEILVASTQDFLTSSFLVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTG 582

Query: 2536 KQLFSVLVRPNAQTRVFVNLIVKERIHVKDTE----------------TMCPRDGYVYFR 2405
            KQLFSVLVRPNA+T+VF+NL VKE+I+ K  E                TMCP DGYVYFR
Sbjct: 583  KQLFSVLVRPNARTKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFR 642

Query: 2404 NSELICGQLGKVTLGNGNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGID 2225
            NSEL+ GQ+GK TLGNGNK+G++SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+D
Sbjct: 643  NSELLSGQVGKATLGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVD 702

Query: 2224 DVQPGERLNQQKKMTIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRK 2045
            DVQPGE LN+QKK  ID+GY++C   I L+    L L PG NAA+TLE +IT VLNEIR 
Sbjct: 703  DVQPGEHLNRQKKKKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRT 762

Query: 2044 TAGDVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHF 1865
             AG+VCM  LHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFIDRTLPHF
Sbjct: 763  AAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHF 822

Query: 1864 PIKSKFPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALED 1685
            PI SK PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LED
Sbjct: 823  PINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLED 882

Query: 1684 LSLYYDQTVRSASGGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSL 1505
            LS++YDQTVR+ASGGIVQF+YGDDGMDPAKMEG++G PLNLDQL+ KV ATCP +  D+L
Sbjct: 883  LSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTL 942

Query: 1504 SPSKIVDLVNERLSKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDGQMED 1325
            SP  I  ++ ++L+++  S + GCS  FK  L  FL +R+  L+ TR  L L E    ++
Sbjct: 943  SPDDIKQMLEDKLTQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKN 1002

Query: 1324 SGTLEN-VAANISGISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLK 1148
               +E  +AANISGISAKQLQVF++TC SRY+ K +E             GEPGTQMTLK
Sbjct: 1003 DSCIEEIIAANISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLK 1062

Query: 1147 TFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLG 968
            TFHFAGVASMNVTLGVPRIKEIINAAK ISTPIIT  L       SAR+VKG +EK VLG
Sbjct: 1063 TFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLG 1122

Query: 967  EVAEAVKIVFKSNQPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITI 788
            EVA A+KIV KS+QP + +  D + ++ LHM  S +S++ +I +H    KIKLK EH+ +
Sbjct: 1123 EVASAIKIVLKSSQPNLVVKLDMQLIEALHMGISADSVQLSILNH---PKIKLKSEHVRV 1179

Query: 787  RGMGNLRIFPPVSDRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQK-----DKYNLL 623
                 LRI+P  +D+++L  EL++LK+MLPKVIVKGI TV+R VI+ +K     +KYNLL
Sbjct: 1180 IDRAKLRIYPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKLEKYNLL 1239

Query: 622  VEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARH 443
            VEGTNLLAVMGTPGVDA  TKSNH+ME+  TLGIEAAR  II EIQ TMKSHGM+ID RH
Sbjct: 1240 VEGTNLLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRH 1299

Query: 442  MMLLADVMTYKGEVLGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSEC 263
            MMLLAD+MTYKGEVLGITR+G+ KMK S+LMLASFEKTSEHLFNAS++GR+D+IEGVSEC
Sbjct: 1300 MMLLADLMTYKGEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSEC 1359

Query: 262  IIMGIPMQLGTGILKVRQRIEQLPEFKYGPDPII 161
            IIMGIPMQLGTGILKVRQR++ LPE KY PDPI+
Sbjct: 1360 IIMGIPMQLGTGILKVRQRLDHLPELKYQPDPIL 1393


>ref|XP_004976057.1| DNA-directed RNA polymerase III subunit 1 [Setaria italica]
          Length = 1397

 Score = 1675 bits (4338), Expect = 0.0
 Identities = 851/1234 (68%), Positives = 989/1234 (80%), Gaps = 23/1234 (1%)
 Frame = -1

Query: 3793 PRCGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLA 3614
            PRC + NG V K +  L V  +    +D   EE + AL H KEKVS   V +L P+  L+
Sbjct: 166  PRCEYKNGVVKKGRVGLIVIHDCSKILDGHTEELKNALQHKKEKVSTSSVRMLDPATALS 225

Query: 3613 LFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQ-SNEDGLTAXXXXXXX 3437
            LF++M DEDCELL+LG RPE LIVTEIA+PP PIRPSV VG+ + SNED +TA       
Sbjct: 226  LFRRMVDEDCELLNLGDRPEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVN 285

Query: 3436 XXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFR 3257
                 +E L        C +CW  LQ  VVE++NS+AP +PES+HRGLVQRLKGK GRFR
Sbjct: 286  TNSILKETLQTGGLFSKCFDCWQQLQLQVVEFVNSDAPCLPESQHRGLVQRLKGKTGRFR 345

Query: 3256 CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPF 3077
             NLSGKR E+TGRTVISPDPNL+ITEVAIP+LMA+VLTYPERV+++N+EKLRQC+RNGP+
Sbjct: 346  GNLSGKRTEYTGRTVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPY 405

Query: 3076 KHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 2897
            KHPGANF+I PDGT+L LKY +++  A +LK G  VERHLEDGD+VLFNRQPSLHRMSIM
Sbjct: 406  KHPGANFIITPDGTKLSLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNRQPSLHRMSIM 465

Query: 2896 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKN 2717
            SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKN
Sbjct: 466  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 525

Query: 2716 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTG 2537
            GEILVASTQDFLTSSFL+TRKD FYDR++F+L+CSY+GD ME+IDLPTPALIKPIELWTG
Sbjct: 526  GEILVASTQDFLTSSFLVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTG 585

Query: 2536 KQLFSVLVRPNAQTRVFVNLIVKERIHVKDTE----------------TMCPRDGYVYFR 2405
            KQLFSVLVRPNA+T+VF+NL VKE+I+ K  E                TMCP DGYVYFR
Sbjct: 586  KQLFSVLVRPNARTKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFR 645

Query: 2404 NSELICGQLGKVTLGNGNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGID 2225
            NSEL+ GQ+GK TLGNGNK+G++SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+D
Sbjct: 646  NSELLSGQVGKATLGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVD 705

Query: 2224 DVQPGERLNQQKKMTIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRK 2045
            DVQPGE LN+QKK  ID+GY++C   I L+    L L PG NAA+TLE +IT VLNEIR 
Sbjct: 706  DVQPGEHLNRQKKKKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRT 765

Query: 2044 TAGDVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHF 1865
             AG+VCM  LHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFIDRTLPHF
Sbjct: 766  AAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHF 825

Query: 1864 PIKSKFPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALED 1685
            PI SK PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LED
Sbjct: 826  PINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLED 885

Query: 1684 LSLYYDQTVRSASGGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSL 1505
            LS++YDQTVR+ASGGIVQF+YGDDGMDPAKMEG++G PLNLDQL+ KV ATCP +  D+L
Sbjct: 886  LSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTL 945

Query: 1504 SPSKIVDLVNERLSKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDGQMED 1325
            SP  I  ++ ++L+++  S + GCS  FK  L  FL +R+  L+ TR  L L E    ++
Sbjct: 946  SPDDIKQMLEDKLTQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKN 1005

Query: 1324 SGTLEN-VAANISGISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLK 1148
               +E  +AANISGISAKQLQVF++TC SRY+ K +E             GEPGTQMTLK
Sbjct: 1006 DSCIEEIIAANISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLK 1065

Query: 1147 TFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLG 968
            TFHFAGVASMNVTLGVPRIKEIINAAK ISTPIIT  L       SAR+VKG +EK VLG
Sbjct: 1066 TFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLG 1125

Query: 967  EVAEAVKIVFKSNQPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITI 788
            EVA A+KIV KS+QP + +  D + ++ LHM  S +S++ +I +H    KIKLK EH+ +
Sbjct: 1126 EVASAIKIVLKSSQPNLVVKLDMQLIEALHMGISADSVQLSILNH---PKIKLKSEHVRV 1182

Query: 787  RGMGNLRIFPPVSDRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQK-----DKYNLL 623
                 LRI+P  +D+++L  EL++LK+MLPKVIVKGI TV+R VI+ +K     +KYNLL
Sbjct: 1183 IDRAKLRIYPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKLEKYNLL 1242

Query: 622  VEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARH 443
            VEGTNLLAVMGTPGVDA  TKSNH+ME+  TLGIEAAR  II EIQ TMKSHGM+ID RH
Sbjct: 1243 VEGTNLLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRH 1302

Query: 442  MMLLADVMTYKGEVLGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSEC 263
            MMLLAD+MTYKGEVLGITR+G+ KMK S+LMLASFEKTSEHLFNAS++GR+D+IEGVSEC
Sbjct: 1303 MMLLADLMTYKGEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSEC 1362

Query: 262  IIMGIPMQLGTGILKVRQRIEQLPEFKYGPDPII 161
            IIMGIPMQLGTGILKVRQR++ LPE KY PDPI+
Sbjct: 1363 IIMGIPMQLGTGILKVRQRLDHLPELKYQPDPIL 1396


>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit 1-like
            [Brachypodium distachyon]
 gb|KQJ99397.1| hypothetical protein BRADI_3g43050v3 [Brachypodium distachyon]
          Length = 1392

 Score = 1674 bits (4336), Expect = 0.0
 Identities = 853/1233 (69%), Positives = 985/1233 (79%), Gaps = 22/1233 (1%)
 Frame = -1

Query: 3793 PRCGHINGNVSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLA 3614
            P CG+ING   K +  L +  +   T+D S EE R+ALSH KEK+S   VH L P+ VL+
Sbjct: 163  PSCGYINGVAKKGRPGLLIVHDCSKTLDGSTEELRSALSHKKEKLSISSVHTLDPATVLS 222

Query: 3613 LFKKMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVFVGSGQ-SNEDGLTAXXXXXXX 3437
            LFK+M DEDCELL+LG RPE LI+TEIA+PP PIRPSVFVG G+ SNEDG+T        
Sbjct: 223  LFKRMTDEDCELLNLGDRPEKLIITEIAVPPVPIRPSVFVGGGRMSNEDGITCILRNIVN 282

Query: 3436 XXXXXREDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFR 3257
                 +  L    PL  C +CW LLQ  VVEYINS+APS+ + ++RGLVQRLKGK GRFR
Sbjct: 283  TNSILKGILQNGDPLMKCFDCWQLLQLQVVEYINSDAPSLTDPQNRGLVQRLKGKTGRFR 342

Query: 3256 CNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPF 3077
             NLSGKR E+TGRTVISPDPNL+ITEVAIP+LMA+VLTYPERV+++NIEKLRQC+RNGP 
Sbjct: 343  GNLSGKRTEYTGRTVISPDPNLRITEVAIPVLMARVLTYPERVSYYNIEKLRQCIRNGPH 402

Query: 3076 KHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIM 2897
            KHPGANFV  PDGT+LHLKY +++  A +LKYGC+VERHLEDGDIVLFNRQPSLHRMSIM
Sbjct: 403  KHPGANFVTQPDGTKLHLKYCDRRIAARDLKYGCIVERHLEDGDIVLFNRQPSLHRMSIM 462

Query: 2896 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKN 2717
            SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKN
Sbjct: 463  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 522

Query: 2716 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTG 2537
            GEILVASTQDFLTSSFLITRKD FYDR+ F+L+CSY+GD ME+IDLPTPA+IKP+ELWTG
Sbjct: 523  GEILVASTQDFLTSSFLITRKDNFYDRSYFTLLCSYLGDAMENIDLPTPAIIKPLELWTG 582

Query: 2536 KQLFSVLVRPNAQTRVFVNLIVKERIHVKD-----------TETMCPRDGYVYFRNSELI 2390
            KQLFSVLVRPNA T+V++NL V+E+I++K             ETMCP DGYVYFRNSEL+
Sbjct: 583  KQLFSVLVRPNACTKVYLNLTVEEKIYMKRRERDKNAVSVLEETMCPNDGYVYFRNSELL 642

Query: 2389 CGQLGKVTLGNGNKNGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPG 2210
             GQ+GK TLGNGNK+G+FSVL+RDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQPG
Sbjct: 643  SGQVGKKTLGNGNKDGMFSVLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPG 702

Query: 2209 ERLNQQKKMTIDDGYRRCSSFIDLYENRK--LTLKPGANAAETLEVEITEVLNEIRKTAG 2036
            E LNQ+KK TID GY  C   I +Y        L PG N A+TLEV ++ +LN++R+ AG
Sbjct: 703  ESLNQKKKKTIDQGYTECHDLIAVYSKGAPGAELHPGCNRAQTLEVRVSAILNQLREKAG 762

Query: 2035 DVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIK 1856
            + CM  LHWRNSPLIMSQCGSKGS INISQM+ CVGQQSVGGRRAP+GFIDRTLPHFPI 
Sbjct: 763  EHCMNTLHWRNSPLIMSQCGSKGSPINISQMVVCVGQQSVGGRRAPDGFIDRTLPHFPIH 822

Query: 1855 SKFPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSL 1676
            SK PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS+
Sbjct: 823  SKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSV 882

Query: 1675 YYDQTVRSASGGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPS 1496
            +YDQTVR+AS GIVQF+YGDDGMDP KMEG+ G PLNLDQL+ KV ATCP++  D LSP 
Sbjct: 883  FYDQTVRNASSGIVQFVYGDDGMDPVKMEGKGGSPLNLDQLFMKVKATCPQRGHDMLSPE 942

Query: 1495 KIVDLVNERLSKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QMEDSG 1319
             I+ ++N++LS+ DMS   GCS  FK LL+ F   R+  LR TR  L L ED   M+DS 
Sbjct: 943  AIMQMLNDKLSEQDMS-SGGCSDKFKELLTKFFEDRIKMLRSTRRTLHLDEDHVGMKDSS 1001

Query: 1318 TLENVAANISGISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXGEPGTQMTLKTFH 1139
              E +AANISGISAKQLQVF++TC+SRYH K +E             GEPGTQMTLKTFH
Sbjct: 1002 IEERIAANISGISAKQLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFH 1061

Query: 1138 FAGVASMNVTLGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVA 959
            FAGVASMNVTLGVPRIKEIINAAKNISTPIITA L        A  VK  +EK VLGEVA
Sbjct: 1062 FAGVASMNVTLGVPRIKEIINAAKNISTPIITAELLSGQDMSFAVKVKRYVEKVVLGEVA 1121

Query: 958  EAVKIVFKSNQPYISIIFDKERLKTL-HMEDSFESIKNAIADHKSIKKIKLKREHITIRG 782
              +KIV KS+QP + +  D +R++   +M  S +S++ +I  H    KIKLK EH+ +  
Sbjct: 1122 AVIKIVLKSSQPNLVVKLDMQRIEAQGYMGISSDSVQQSIIRH---PKIKLKSEHVRVID 1178

Query: 781  MGNLRIFPPVSDRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQK------DKYNLLV 620
               LRI+P  +D+++L  EL++LKSMLPKVIVKGI TV+RAV+N  K      D+YNLLV
Sbjct: 1179 GAKLRIYPTGTDKSKLQLELHTLKSMLPKVIVKGIPTVERAVVNPVKRPDKTLDRYNLLV 1238

Query: 619  EGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHM 440
            EGTNLL V+GTPGVDA KTKSNH+ME+ QTLGIEAAR  II EI+ T +S+ M ID RHM
Sbjct: 1239 EGTNLLKVLGTPGVDAKKTKSNHIMEVNQTLGIEAARRSIIDEIRYTFESNNMIIDQRHM 1298

Query: 439  MLLADVMTYKGEVLGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECI 260
            MLLAD+MTYKGEVLGITRFG+ KMK S+LMLASFEKT EHLFNAS++GR+D+IEGVSECI
Sbjct: 1299 MLLADLMTYKGEVLGITRFGIVKMKSSVLMLASFEKTLEHLFNASYSGREDEIEGVSECI 1358

Query: 259  IMGIPMQLGTGILKVRQRIEQLPEFKYGPDPII 161
            IMGIPM LG+GILKVRQR++ LPEF Y PD II
Sbjct: 1359 IMGIPMTLGSGILKVRQRLDHLPEFNYQPDAII 1391