BLASTX nr result
ID: Ophiopogon23_contig00012688
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00012688
(446 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK65887.1| uncharacterized protein A4U43_C06F2000 [Asparagus... 122 2e-29
ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asp... 122 2e-29
ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 57 2e-06
>gb|ONK65887.1| uncharacterized protein A4U43_C06F2000 [Asparagus officinalis]
Length = 1833
Score = 122 bits (307), Expect = 2e-29
Identities = 71/162 (43%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Frame = -3
Query: 444 DNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSSWDTAKVRHSNQST 265
+ NK+ W+ +SP V +D WQGR +RDQ AP SSE+PT++S WSSWD AK H NQS
Sbjct: 1295 NTSNKTSWQ-VSPKVVGADIWQGRESRDQHAPDSSEIPTSKSDDWSSWDNAKPHHPNQSA 1353
Query: 264 QSRKEFNGF---------SSFDNDDVQKSP-------IWKPNKPEVVSSSGWNEPVTRVN 133
Q K G+ SS QK P W P KPE SS W E
Sbjct: 1354 QLNKGVGGWDVKKSRAESSSGWQPSSQKKPWAAEANESWTPRKPETQSSLPWEE------ 1407
Query: 132 EPDSGWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKS 7
+S WK+ K + SSWTAKKP++E S G +N E AW A S
Sbjct: 1408 NSNSQWKKSKASGSSWTAKKPQLEISLGQHENIENNAWQASS 1449
Score = 62.8 bits (151), Expect = 2e-08
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 24/172 (13%)
Frame = -3
Query: 444 DNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSE-------MPTTRSAVW------SS 304
+ + S W+K A SW + + +++ G E ++ +W SS
Sbjct: 1406 EENSNSQWKKSK---ASGSSWTAKKPQLEISLGQHENIENNAWQASSEKKIWTDKSNESS 1462
Query: 303 WDTAKVRHSNQS-----TQSRKEFNGFSSFDND-DVQKSPIWKPNKPEVVSSSGWNEPVT 142
W K + S T + G S + D W P KPE SSS W + +
Sbjct: 1463 WRPKKPEAQSSSPWKENTSETNAWQGSSEKKQETDTANEASWTPRKPETQSSSPWKKDTS 1522
Query: 141 RVNEPDSGWKER----KGNDSSWTAKKPEVESSSGWADN-SEKKAWPAKSPD 1
N + +++ K N+SSWT +KP+ ++SS W +N SEKK W D
Sbjct: 1523 EDNAWQTSSEKKPWTDKTNESSWTPRKPDTQTSSPWNENSSEKKGWSTNGVD 1574
Score = 57.0 bits (136), Expect = 2e-06
Identities = 49/175 (28%), Positives = 66/175 (37%), Gaps = 30/175 (17%)
Frame = -3
Query: 444 DNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPT-TRSAVWSSWDTAKVRHSNQS 268
D N+S W P S W+ + GSSE T +A +SW K
Sbjct: 1456 DKSNESSWRPKKPEAQSSSPWKENTSETNAWQGSSEKKQETDTANEASWTPRK-----PE 1510
Query: 267 TQSRKEFNGFSSFDN-----------DDVQKSPIWKPNKPEVVSSSGWNEPVTR-----V 136
TQS + +S DN D W P KP+ +SS WNE +
Sbjct: 1511 TQSSSPWKKDTSEDNAWQTSSEKKPWTDKTNESSWTPRKPDTQTSSPWNENSSEKKGWST 1570
Query: 135 NEPDS-------------GWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAK 10
N DS GW E G ++ WTAK PEVE+ + K+ W ++
Sbjct: 1571 NGVDSVLGGNESEVKASPGWNE--GGENPWTAKTPEVETPNVAWGGRGKQGWKSQ 1623
>ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
ref|XP_020269147.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
Length = 1945
Score = 122 bits (307), Expect = 2e-29
Identities = 71/162 (43%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Frame = -3
Query: 444 DNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSSWDTAKVRHSNQST 265
+ NK+ W+ +SP V +D WQGR +RDQ AP SSE+PT++S WSSWD AK H NQS
Sbjct: 1407 NTSNKTSWQ-VSPKVVGADIWQGRESRDQHAPDSSEIPTSKSDDWSSWDNAKPHHPNQSA 1465
Query: 264 QSRKEFNGF---------SSFDNDDVQKSP-------IWKPNKPEVVSSSGWNEPVTRVN 133
Q K G+ SS QK P W P KPE SS W E
Sbjct: 1466 QLNKGVGGWDVKKSRAESSSGWQPSSQKKPWAAEANESWTPRKPETQSSLPWEE------ 1519
Query: 132 EPDSGWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKS 7
+S WK+ K + SSWTAKKP++E S G +N E AW A S
Sbjct: 1520 NSNSQWKKSKASGSSWTAKKPQLEISLGQHENIENNAWQASS 1561
Score = 62.8 bits (151), Expect = 2e-08
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 24/172 (13%)
Frame = -3
Query: 444 DNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSE-------MPTTRSAVW------SS 304
+ + S W+K A SW + + +++ G E ++ +W SS
Sbjct: 1518 EENSNSQWKKSK---ASGSSWTAKKPQLEISLGQHENIENNAWQASSEKKIWTDKSNESS 1574
Query: 303 WDTAKVRHSNQS-----TQSRKEFNGFSSFDND-DVQKSPIWKPNKPEVVSSSGWNEPVT 142
W K + S T + G S + D W P KPE SSS W + +
Sbjct: 1575 WRPKKPEAQSSSPWKENTSETNAWQGSSEKKQETDTANEASWTPRKPETQSSSPWKKDTS 1634
Query: 141 RVNEPDSGWKER----KGNDSSWTAKKPEVESSSGWADN-SEKKAWPAKSPD 1
N + +++ K N+SSWT +KP+ ++SS W +N SEKK W D
Sbjct: 1635 EDNAWQTSSEKKPWTDKTNESSWTPRKPDTQTSSPWNENSSEKKGWSTNGVD 1686
Score = 57.0 bits (136), Expect = 2e-06
Identities = 49/175 (28%), Positives = 66/175 (37%), Gaps = 30/175 (17%)
Frame = -3
Query: 444 DNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPT-TRSAVWSSWDTAKVRHSNQS 268
D N+S W P S W+ + GSSE T +A +SW K
Sbjct: 1568 DKSNESSWRPKKPEAQSSSPWKENTSETNAWQGSSEKKQETDTANEASWTPRK-----PE 1622
Query: 267 TQSRKEFNGFSSFDN-----------DDVQKSPIWKPNKPEVVSSSGWNEPVTR-----V 136
TQS + +S DN D W P KP+ +SS WNE +
Sbjct: 1623 TQSSSPWKKDTSEDNAWQTSSEKKPWTDKTNESSWTPRKPDTQTSSPWNENSSEKKGWST 1682
Query: 135 NEPDS-------------GWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAK 10
N DS GW E G ++ WTAK PEVE+ + K+ W ++
Sbjct: 1683 NGVDSVLGGNESEVKASPGWNE--GGENPWTAKTPEVETPNVAWGGRGKQGWKSQ 1735
>ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
1-like [Phoenix dactylifera]
Length = 1656
Score = 57.0 bits (136), Expect = 2e-06
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Frame = -3
Query: 444 DNGNK------SGWEKLS----PMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSSWDT 295
+NGN+ SGW+ P + SD QG GN +S++PT R +VWSSWD
Sbjct: 1306 ENGNQPEMDTSSGWQGWDNGKQPFIDRSDRSQGWGNERVTDRENSKLPTARPSVWSSWDA 1365
Query: 294 AKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEPVTRVNEPDSGW 115
+ V+ +Q++ + + +S KS IW V+ + ++ N D GW
Sbjct: 1366 SDVQERSQASSPKSQPRHVAS-----SSKSRIWSSQSSSKVADGSSVDTTSKGNAQD-GW 1419
Query: 114 KERKGN------DSSWTAKKPEVESSSGWADNSEKKAWPAKSPD 1
+ D++ T K E +++ + S+ W +S D
Sbjct: 1420 NHVTESPAKPVWDTNITRKSHEADNTWNTSAFSKSNVWDGQSFD 1463