BLASTX nr result
ID: Ophiopogon23_contig00012500
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00012500
(509 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020250698.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 237 3e-77
ref|XP_008808235.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 219 8e-70
gb|PKA50966.1| hypothetical protein AXF42_Ash007622 [Apostasia s... 219 1e-69
ref|XP_009392936.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 218 3e-69
ref|XP_010925042.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 214 5e-68
ref|XP_018844836.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 213 2e-67
gb|OWM77279.1| hypothetical protein CDL15_Pgr028916 [Punica gran... 212 6e-67
gb|KDP33872.1| hypothetical protein JCGZ_07443 [Jatropha curcas] 212 6e-67
ref|XP_012076986.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 212 7e-67
ref|XP_023905572.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 211 1e-66
ref|XP_021650177.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 211 2e-66
gb|POF26955.1| pre-mrna cleavage factor im 25 kda subunit 1 [Que... 211 3e-66
gb|OAY78491.1| Pre-mRNA cleavage factor Im 25 kDa subunit 1 [Ana... 210 4e-66
ref|XP_006451545.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 209 1e-65
ref|XP_020098837.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 208 2e-65
ref|NP_567835.1| homolog of CFIM-25 [Arabidopsis thaliana] >gi|7... 208 2e-65
gb|OAO97209.1| CFIM-25 [Arabidopsis thaliana] 208 2e-65
ref|XP_020872508.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 208 3e-65
ref|XP_015889257.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 208 3e-65
ref|XP_010049443.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 207 4e-65
>ref|XP_020250698.1| pre-mRNA cleavage factor Im 25 kDa subunit 1 [Asparagus
officinalis]
gb|ONK54898.1| uncharacterized protein A4U43_UnF9920 [Asparagus officinalis]
Length = 190
Score = 237 bits (605), Expect = 3e-77
Identities = 116/161 (72%), Positives = 127/161 (78%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
RL+SNY AHGLRTCV+GVLLVEL++QPHVLLLQVRNS FSLPGGRLRPGE DT G
Sbjct: 30 RLQSNYGAHGLRTCVRGVLLVELYQQPHVLLLQVRNSTFSLPGGRLRPGESDTAGLKRKL 89
Query: 328 XXXXXXXXXXXXXXXXXDCIGMWWKSDFETLPYPYMPRRSKECTKLFLVRLPMTQQFVVP 149
+CIGMWW+SDFETLPYPYMPR+ KECTKLFLV LPM QFVVP
Sbjct: 90 SRKLSHNNSDDGDWEVGECIGMWWRSDFETLPYPYMPRKPKECTKLFLVSLPMAWQFVVP 149
Query: 148 RNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSIIQD 26
RNMKLLAVP+ QLHDN KTYGPIISGIPQLLSK++ I+QD
Sbjct: 150 RNMKLLAVPIRQLHDNCKTYGPIISGIPQLLSKFTIKIMQD 190
>ref|XP_008808235.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Phoenix
dactylifera]
Length = 209
Score = 219 bits (558), Expect = 8e-70
Identities = 108/165 (65%), Positives = 128/165 (77%), Gaps = 4/165 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
RL+++YAAHG+RTCV+GVLLVELF+ PHVLLLQV+NS F LPGGRLRPGE D +G
Sbjct: 45 RLKASYAAHGMRTCVEGVLLVELFQHPHVLLLQVKNSFFKLPGGRLRPGESDIEGLKRKL 104
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
D CIG+WW+S+FETLP+PY+P RR KECTKLFLVRLP T+Q
Sbjct: 105 SRKLSLDESCINDEWQVDECIGIWWRSEFETLPFPYLPPNTRRPKECTKLFLVRLPRTRQ 164
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSIIQD 26
FVVP+N+KLLAVPLCQ+HDN+KTYGPIISGIP LSK+SF+ I D
Sbjct: 165 FVVPKNLKLLAVPLCQIHDNSKTYGPIISGIPHHLSKFSFNTIHD 209
>gb|PKA50966.1| hypothetical protein AXF42_Ash007622 [Apostasia shenzhenica]
Length = 205
Score = 219 bits (557), Expect = 1e-69
Identities = 104/165 (63%), Positives = 129/165 (78%), Gaps = 4/165 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
R+RSNYAA+GLRTCV+GVLLVELF+QPH+LLLQV+NS F LPGGRLRPGE D +G
Sbjct: 41 RMRSNYAANGLRTCVEGVLLVELFQQPHLLLLQVKNSFFKLPGGRLRPGESDVEGLKRKL 100
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
C+GMWW+S FETLP+PY+P RR KEC KLFL++LPM+++
Sbjct: 101 SSKLSRYNSSVNDDWEIGECLGMWWRSGFETLPFPYLPPSSRRPKECIKLFLIKLPMSRR 160
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSIIQD 26
F+VP+N KLLAVPLCQ+HDN +TYGP+I+GIPQLLSK+SF+I+QD
Sbjct: 161 FIVPKNAKLLAVPLCQIHDNCETYGPVIAGIPQLLSKFSFNIVQD 205
>ref|XP_009392936.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X2
[Musa acuminata subsp. malaccensis]
Length = 215
Score = 218 bits (555), Expect = 3e-69
Identities = 109/165 (66%), Positives = 127/165 (76%), Gaps = 4/165 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
R+++NYAA G+RTCV G+LLVELF+ PHVLLLQVRNS F LPGGRLR GE D +G
Sbjct: 51 RMKANYAARGMRTCVHGILLVELFQHPHVLLLQVRNSFFKLPGGRLRSGESDVEGLKRKL 110
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
D IGMWW+SDFETL +PY+P RR KECTKLFLV+LPMT+
Sbjct: 111 SRKLSSEENGTNDDWQIDELIGMWWRSDFETLRFPYLPPNLRRPKECTKLFLVKLPMTRH 170
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSIIQD 26
F+VPRN+KLLAVPLCQLHDN++TYGPIISGIPQLLSK+SF+IIQD
Sbjct: 171 FIVPRNLKLLAVPLCQLHDNSETYGPIISGIPQLLSKFSFNIIQD 215
>ref|XP_010925042.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X2
[Elaeis guineensis]
Length = 211
Score = 214 bits (546), Expect = 5e-68
Identities = 106/165 (64%), Positives = 125/165 (75%), Gaps = 4/165 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
RL+++YAAHGLRTCV+GVLLVELF+ PHVLLLQV+NS F LPGGRLRPGE D +G
Sbjct: 47 RLKASYAAHGLRTCVEGVLLVELFQHPHVLLLQVKNSFFKLPGGRLRPGESDIEGLKRKL 106
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
D CIG+WW+S+FETLP+PY+P R KEC KLFLVRLP +Q
Sbjct: 107 SRKLSLDESCVNDEWQVDECIGIWWRSEFETLPFPYLPPNTHRPKECAKLFLVRLPRNRQ 166
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSIIQD 26
FVVP+N+KLLAVPLCQ+HDN+KTYGPIISGIP LLSK+ F+ I D
Sbjct: 167 FVVPKNLKLLAVPLCQIHDNSKTYGPIISGIPHLLSKFYFNTIHD 211
>ref|XP_018844836.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Juglans
regia]
ref|XP_018844845.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Juglans
regia]
Length = 217
Score = 213 bits (543), Expect = 2e-67
Identities = 103/164 (62%), Positives = 126/164 (76%), Gaps = 4/164 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
R++SNYAAHGLRT V+ V+LVELF+ PHVLLLQVRNS+F LPGGRLRPGE D G
Sbjct: 53 RMKSNYAAHGLRTSVEAVILVELFKHPHVLLLQVRNSIFKLPGGRLRPGESDIDGLRRKL 112
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
C+GMWW+ DFETL YPY+P +R KECTKLFLVRLP++Q+
Sbjct: 113 SKKLSANGSGDETAWQVGECLGMWWRPDFETLLYPYLPPNVKRPKECTKLFLVRLPVSQK 172
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSIIQ 29
F+VP+ +KLLAVPLCQ+H+N+KTYGPIISG+PQLLSK+SF+II+
Sbjct: 173 FIVPKTLKLLAVPLCQIHENHKTYGPIISGVPQLLSKFSFNIIE 216
>gb|OWM77279.1| hypothetical protein CDL15_Pgr028916 [Punica granatum]
gb|PKI51836.1| hypothetical protein CRG98_027754 [Punica granatum]
Length = 218
Score = 212 bits (540), Expect = 6e-67
Identities = 101/163 (61%), Positives = 126/163 (77%), Gaps = 4/163 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
R++SNYAAHG+RTCV+ V++VELF+ PHVLLLQVRNS F LPGGRLRPGE + +G
Sbjct: 53 RMKSNYAAHGMRTCVEAVVVVELFKHPHVLLLQVRNSTFKLPGGRLRPGESEIEGLGRKL 112
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
C+GMWW+ DFETL YPY+P ++ KECTKLFLV+LP++++
Sbjct: 113 SRKLSVSDSGDEKEWEIGECLGMWWRPDFETLLYPYLPPNVKKPKECTKLFLVKLPVSRK 172
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSII 32
F+VP N+KLLAVPLCQ+HDN+KTYGPIISGIPQLLSKYSF+I+
Sbjct: 173 FIVPGNLKLLAVPLCQIHDNSKTYGPIISGIPQLLSKYSFNIV 215
>gb|KDP33872.1| hypothetical protein JCGZ_07443 [Jatropha curcas]
Length = 208
Score = 212 bits (539), Expect = 6e-67
Identities = 102/162 (62%), Positives = 124/162 (76%), Gaps = 3/162 (1%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
R++SNY AHGLRT V+ V+LVELF+ PH+LLLQ+RNS+F LPGGRLRPGE D G
Sbjct: 46 RMKSNYLAHGLRTYVEAVILVELFKHPHLLLLQIRNSIFRLPGGRLRPGESDIDGLKRKL 105
Query: 328 XXXXXXXXXXXXXXXXXDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQF 158
C+GMWWK DFETLPYPYMP + KECTKLFLVRLPM+++F
Sbjct: 106 SRKLSGNEDETDWEVDE-CLGMWWKPDFETLPYPYMPPNVKTPKECTKLFLVRLPMSRKF 164
Query: 157 VVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSII 32
+VP+N+KLLA+PLCQ+H+N+KTYG IISGIPQLLSK+SF+II
Sbjct: 165 IVPKNLKLLAIPLCQIHENHKTYGSIISGIPQLLSKFSFNII 206
>ref|XP_012076986.1| pre-mRNA cleavage factor Im 25 kDa subunit 1 [Jatropha curcas]
Length = 212
Score = 212 bits (539), Expect = 7e-67
Identities = 102/162 (62%), Positives = 124/162 (76%), Gaps = 3/162 (1%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
R++SNY AHGLRT V+ V+LVELF+ PH+LLLQ+RNS+F LPGGRLRPGE D G
Sbjct: 50 RMKSNYLAHGLRTYVEAVILVELFKHPHLLLLQIRNSIFRLPGGRLRPGESDIDGLKRKL 109
Query: 328 XXXXXXXXXXXXXXXXXDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQF 158
C+GMWWK DFETLPYPYMP + KECTKLFLVRLPM+++F
Sbjct: 110 SRKLSGNEDETDWEVDE-CLGMWWKPDFETLPYPYMPPNVKTPKECTKLFLVRLPMSRKF 168
Query: 157 VVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSII 32
+VP+N+KLLA+PLCQ+H+N+KTYG IISGIPQLLSK+SF+II
Sbjct: 169 IVPKNLKLLAIPLCQIHENHKTYGSIISGIPQLLSKFSFNII 210
>ref|XP_023905572.1| pre-mRNA cleavage factor Im 25 kDa subunit 1 [Quercus suber]
Length = 220
Score = 211 bits (538), Expect = 1e-66
Identities = 103/164 (62%), Positives = 125/164 (76%), Gaps = 4/164 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
R++SNYAAHGLRTCVQ V+LVELF+ PH+LLLQVRNS+F LPGGRLR GE D G
Sbjct: 56 RMKSNYAAHGLRTCVQAVILVELFKHPHLLLLQVRNSIFKLPGGRLRLGESDIDGLRRKL 115
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
C+GMWWK DFETL YPY+P + KECTKLFLVRLP +++
Sbjct: 116 SRKLSADETGDGIGWEVGECLGMWWKPDFETLVYPYLPPNVKCPKECTKLFLVRLPESRK 175
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSIIQ 29
F+VP+N+KLLAVPLCQ+H+N+KTYGPIISG+PQLLSK+SF+II+
Sbjct: 176 FIVPKNLKLLAVPLCQIHENHKTYGPIISGVPQLLSKFSFNIIE 219
>ref|XP_021650177.1| pre-mRNA cleavage factor Im 25 kDa subunit 1-like [Hevea
brasiliensis]
ref|XP_021650178.1| pre-mRNA cleavage factor Im 25 kDa subunit 1-like [Hevea
brasiliensis]
Length = 212
Score = 211 bits (536), Expect = 2e-66
Identities = 100/162 (61%), Positives = 125/162 (77%), Gaps = 3/162 (1%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
R++SNY AHGLRTCV+ V+LVELF+ PH+LLLQ++NS+F LPGGRLRPGE D +G
Sbjct: 50 RMKSNYQAHGLRTCVEAVILVELFKHPHLLLLQIKNSIFKLPGGRLRPGESDIEGLKRKL 109
Query: 328 XXXXXXXXXXXXXXXXXDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQF 158
C+GMWW+ DFETL YPYMP + KECTKL+LVRLP++++F
Sbjct: 110 SRKLTVNEDKTDWEVGE-CLGMWWRPDFETLLYPYMPPDGKSPKECTKLYLVRLPVSRKF 168
Query: 157 VVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSII 32
+VP+N+KLLAVPLCQ+H+N KTYGPIISGIPQLLSK+SF+II
Sbjct: 169 IVPKNLKLLAVPLCQIHENYKTYGPIISGIPQLLSKFSFNII 210
>gb|POF26955.1| pre-mrna cleavage factor im 25 kda subunit 1 [Quercus suber]
Length = 250
Score = 211 bits (538), Expect = 3e-66
Identities = 103/164 (62%), Positives = 125/164 (76%), Gaps = 4/164 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
R++SNYAAHGLRTCVQ V+LVELF+ PH+LLLQVRNS+F LPGGRLR GE D G
Sbjct: 86 RMKSNYAAHGLRTCVQAVILVELFKHPHLLLLQVRNSIFKLPGGRLRLGESDIDGLRRKL 145
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
C+GMWWK DFETL YPY+P + KECTKLFLVRLP +++
Sbjct: 146 SRKLSADETGDGIGWEVGECLGMWWKPDFETLVYPYLPPNVKCPKECTKLFLVRLPESRK 205
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSIIQ 29
F+VP+N+KLLAVPLCQ+H+N+KTYGPIISG+PQLLSK+SF+II+
Sbjct: 206 FIVPKNLKLLAVPLCQIHENHKTYGPIISGVPQLLSKFSFNIIE 249
>gb|OAY78491.1| Pre-mRNA cleavage factor Im 25 kDa subunit 1 [Ananas comosus]
Length = 210
Score = 210 bits (534), Expect = 4e-66
Identities = 104/165 (63%), Positives = 124/165 (75%), Gaps = 4/165 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
RL+SN+A+HGLRTCV GVLLVELF PHVL+LQV+NS F LPGGRLRPGE D G
Sbjct: 45 RLKSNFASHGLRTCVLGVLLVELFRHPHVLVLQVKNSFFKLPGGRLRPGEQDVDGLKRKL 104
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
C+GMWW+S+FETLP+PY P RR KECTK+FLVRLP+++Q
Sbjct: 105 SRMLSLEDCAINDNWQIGECVGMWWRSEFETLPFPYPPPNSRRPKECTKVFLVRLPVSRQ 164
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSIIQD 26
FVVPR++KLLAVPL Q+HDN++ YGPIISGIP LLSK+SF+II D
Sbjct: 165 FVVPRHLKLLAVPLYQIHDNSEVYGPIISGIPHLLSKFSFNIIDD 209
>ref|XP_006451545.1| pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X1 [Citrus
clementina]
ref|XP_006475514.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X1
[Citrus sinensis]
ref|XP_015384947.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X2
[Citrus sinensis]
ref|XP_024048028.1| pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X1 [Citrus
clementina]
gb|ESR64785.1| hypothetical protein CICLE_v10009459mg [Citrus clementina]
gb|KDO55414.1| hypothetical protein CISIN_1g028063mg [Citrus sinensis]
dbj|GAY57278.1| hypothetical protein CUMW_178200 [Citrus unshiu]
Length = 214
Score = 209 bits (531), Expect = 1e-65
Identities = 102/163 (62%), Positives = 123/163 (75%), Gaps = 4/163 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
R++SNY AHGLRTCV+ VLLVELF+ PH+LLLQVRNS+F LPGGRLRPGE D G
Sbjct: 50 RMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKL 109
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
C+GMWWK DFETL +PY P +R KECTKLFLV+LP++Q+
Sbjct: 110 TRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQK 169
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSII 32
F VP+N+KLLAVPLCQ+H+N+KTYG IISG+PQLLSK+SF+II
Sbjct: 170 FFVPKNLKLLAVPLCQIHENHKTYGQIISGVPQLLSKFSFNII 212
>ref|XP_020098837.1| pre-mRNA cleavage factor Im 25 kDa subunit 1 [Ananas comosus]
Length = 210
Score = 208 bits (529), Expect = 2e-65
Identities = 103/165 (62%), Positives = 123/165 (74%), Gaps = 4/165 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
RL+SN+A+HGLRTCV GVLLVELF PHVL+LQV+N F LPGGRLRPGE D G
Sbjct: 45 RLKSNFASHGLRTCVLGVLLVELFRHPHVLVLQVKNCFFKLPGGRLRPGEQDVDGLKRKL 104
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
C+GMWW+S+FETLP+PY P RR KECTK+FLVRLP+++Q
Sbjct: 105 SRMLSLEDCAINDNWQIGECVGMWWRSEFETLPFPYPPPNSRRPKECTKVFLVRLPVSRQ 164
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSIIQD 26
FVVPR++KLLAVPL Q+HDN++ YGPIISGIP LLSK+SF+II D
Sbjct: 165 FVVPRHLKLLAVPLYQIHDNSEVYGPIISGIPHLLSKFSFNIIDD 209
>ref|NP_567835.1| homolog of CFIM-25 [Arabidopsis thaliana]
sp|Q94AF0.1|CFIS1_ARATH RecName: Full=Pre-mRNA cleavage factor Im 25 kDa subunit 1;
AltName: Full=Cleavage and polyadenylation specificity
factor 25 kDa subunit; Short=AtCFI-25; Short=CFIm-25;
Short=CPSF 25 kDa subunit; AltName: Full=Cleavage and
polyadenylation specificity factor subunit 25
gb|AAK82492.1| AT4g29820/F27B13_60 [Arabidopsis thaliana]
gb|AAM10303.1| AT4g29820/F27B13_60 [Arabidopsis thaliana]
gb|AAM63194.1| mRNA cleavage factor subunit-like protein [Arabidopsis thaliana]
gb|AEE85682.1| homolog of CFIM-25 [Arabidopsis thaliana]
Length = 222
Score = 208 bits (530), Expect = 2e-65
Identities = 103/164 (62%), Positives = 123/164 (75%), Gaps = 4/164 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
RL+SNYAAHGLRTCV+ VLLVELF+ PHVLLLQ RNS+F LPGGRLRPGE D +G
Sbjct: 58 RLKSNYAAHGLRTCVEAVLLVELFKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGLKRKL 117
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
CIGMWW+ +FETL YP++P + KECTKLFLVRLP+ QQ
Sbjct: 118 ASKLSVNENVGVSGYEVGECIGMWWRPNFETLMYPFLPPNIKHPKECTKLFLVRLPVHQQ 177
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSIIQ 29
FVVP+N KLLAVPLCQLH+N KTYGPI+S IP+LLSK+SF++++
Sbjct: 178 FVVPKNFKLLAVPLCQLHENEKTYGPIMSQIPKLLSKFSFNMME 221
>gb|OAO97209.1| CFIM-25 [Arabidopsis thaliana]
Length = 223
Score = 208 bits (530), Expect = 2e-65
Identities = 103/164 (62%), Positives = 123/164 (75%), Gaps = 4/164 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
RL+SNYAAHGLRTCV+ VLLVELF+ PHVLLLQ RNS+F LPGGRLRPGE D +G
Sbjct: 59 RLKSNYAAHGLRTCVEAVLLVELFKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGLKRKL 118
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
CIGMWW+ +FETL YP++P + KECTKLFLVRLP+ QQ
Sbjct: 119 ASKLSVNENVGVSGYEVGECIGMWWRPNFETLMYPFLPPNIKHPKECTKLFLVRLPVHQQ 178
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSIIQ 29
FVVP+N KLLAVPLCQLH+N KTYGPI+S IP+LLSK+SF++++
Sbjct: 179 FVVPKNFKLLAVPLCQLHENEKTYGPIMSQIPKLLSKFSFNMME 222
>ref|XP_020872508.1| pre-mRNA cleavage factor Im 25 kDa subunit 1 [Arabidopsis lyrata
subsp. lyrata]
gb|EFH43645.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 208 bits (529), Expect = 3e-65
Identities = 103/164 (62%), Positives = 122/164 (74%), Gaps = 4/164 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
RL+SNYAAHGLRTCV+ VLLVEL + PHVLLLQ RNS+F LPGGRLRPGE D +G
Sbjct: 59 RLKSNYAAHGLRTCVEAVLLVELLKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGVKRKL 118
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
CIGMWW+ +FETL YP++P + KECTKLFLVRLP+ QQ
Sbjct: 119 ASKLSVNENVVVPGLEVGECIGMWWRPNFETLMYPFLPPNVKHPKECTKLFLVRLPVNQQ 178
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSIIQ 29
FVVP+N KLLAVPLCQLH+N KTYGPIIS IP+LLSK+SF++++
Sbjct: 179 FVVPKNFKLLAVPLCQLHENEKTYGPIISQIPKLLSKFSFNMME 222
>ref|XP_015889257.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Ziziphus
jujuba]
ref|XP_015889258.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Ziziphus
jujuba]
Length = 225
Score = 208 bits (529), Expect = 3e-65
Identities = 100/163 (61%), Positives = 125/163 (76%), Gaps = 4/163 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
RL+SNYAAHGLRT V+ V++VELF+ PH+LLLQV+NS F LPGGRLRPGE D G
Sbjct: 61 RLKSNYAAHGLRTSVEAVIVVELFKHPHLLLLQVKNSFFKLPGGRLRPGESDIDGLRRKL 120
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
C+GMWW+ DFETL YPY+P +R KECTKLFLV+LP++++
Sbjct: 121 SRKLSLSENGDGIDWEVGECLGMWWRPDFETLLYPYLPPNVKRPKECTKLFLVKLPVSRK 180
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSII 32
F+VP+N+KLLAVPLCQ+H+N+KTYGPIISG+PQLLSK+SF+II
Sbjct: 181 FIVPKNLKLLAVPLCQIHENHKTYGPIISGVPQLLSKFSFNII 223
>ref|XP_010049443.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Eucalyptus
grandis]
Length = 222
Score = 207 bits (528), Expect = 4e-65
Identities = 98/163 (60%), Positives = 125/163 (76%), Gaps = 4/163 (2%)
Frame = -2
Query: 508 RLRSNYAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGXXXXX 329
R++S+YAAHGLRTCV+ V++VELF PH+LLLQVRNS F LPGGRLRPGE D +G
Sbjct: 58 RMKSHYAAHGLRTCVEAVIVVELFRHPHLLLLQVRNSTFQLPGGRLRPGESDVEGLKRKL 117
Query: 328 XXXXXXXXXXXXXXXXXD-CIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQ 161
C+GMWW+ DFETL YPY+P ++ KECTKLFLV+LP++++
Sbjct: 118 TSKLSANGAGDETQWEIGECLGMWWRPDFETLLYPYLPPNIKKPKECTKLFLVKLPVSRK 177
Query: 160 FVVPRNMKLLAVPLCQLHDNNKTYGPIISGIPQLLSKYSFSII 32
F+VP+N+KLLAVPLCQ+H+N KTYGPII+G+PQLLSK+SF+II
Sbjct: 178 FIVPKNLKLLAVPLCQIHENLKTYGPIIAGVPQLLSKFSFNII 220