BLASTX nr result
ID: Ophiopogon23_contig00011988
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00011988
(860 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020249791.1| mediator of RNA polymerase II transcription ... 98 5e-19
ref|XP_020254459.1| mediator of RNA polymerase II transcription ... 94 1e-17
ref|XP_020254458.1| mediator of RNA polymerase II transcription ... 94 1e-17
ref|XP_020254457.1| mediator of RNA polymerase II transcription ... 94 1e-17
ref|XP_008811115.1| PREDICTED: mediator of RNA polymerase II tra... 91 1e-16
ref|XP_020674103.1| mediator of RNA polymerase II transcription ... 90 2e-16
ref|XP_020674102.1| mediator of RNA polymerase II transcription ... 90 2e-16
gb|PKA48041.1| Mediator of RNA polymerase II transcription subun... 90 2e-16
ref|XP_020674100.1| mediator of RNA polymerase II transcription ... 90 2e-16
ref|XP_014752317.1| PREDICTED: mediator of RNA polymerase II tra... 90 3e-16
ref|XP_010235445.1| PREDICTED: mediator of RNA polymerase II tra... 90 3e-16
ref|XP_006658903.1| PREDICTED: mediator of RNA polymerase II tra... 89 5e-16
ref|XP_008804025.1| PREDICTED: mediator of RNA polymerase II tra... 89 5e-16
dbj|BAC79761.1| unknown protein [Oryza sativa Japonica Group] >g... 86 1e-15
ref|NP_001170168.1| uncharacterized protein LOC100384108 [Zea ma... 86 2e-15
ref|XP_009379762.1| PREDICTED: mediator of RNA polymerase II tra... 87 2e-15
ref|XP_021307272.1| mediator of RNA polymerase II transcription ... 87 2e-15
ref|XP_002466024.1| mediator of RNA polymerase II transcription ... 87 2e-15
ref|XP_020598943.1| mediator of RNA polymerase II transcription ... 87 2e-15
dbj|BAT02934.1| Os07g0648300, partial [Oryza sativa Japonica Group] 86 3e-15
>ref|XP_020249791.1| mediator of RNA polymerase II transcription subunit 12-like
[Asparagus officinalis]
gb|ONK55508.1| uncharacterized protein A4U43_UnF2100 [Asparagus officinalis]
Length = 2224
Score = 97.8 bits (242), Expect = 5e-19
Identities = 49/80 (61%), Positives = 51/80 (63%)
Frame = +2
Query: 2 PSTNXXXXXXXXXXXXXXIEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLK 181
PS N +EIDPWTLLEEG MG V+GDHANLKACSWLK
Sbjct: 2145 PSANLSAKNKALASMDSEMEIDPWTLLEEGTVSASASNSSSNMGTVNGDHANLKACSWLK 2204
Query: 182 GAVRVRRTDLTYVGALDDDS 241
GAVRVRRTDLTYVG LDDDS
Sbjct: 2205 GAVRVRRTDLTYVGTLDDDS 2224
>ref|XP_020254459.1| mediator of RNA polymerase II transcription subunit 12-like isoform
X3 [Asparagus officinalis]
Length = 2221
Score = 93.6 bits (231), Expect = 1e-17
Identities = 47/80 (58%), Positives = 51/80 (63%)
Frame = +2
Query: 2 PSTNXXXXXXXXXXXXXXIEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLK 181
PSTN +EIDPWTLLE+G + V+GDHANLKACSWLK
Sbjct: 2142 PSTNLSTKSKALASLDSDMEIDPWTLLEDGTVSASSSSNSGNVSKVNGDHANLKACSWLK 2201
Query: 182 GAVRVRRTDLTYVGALDDDS 241
GAVRVRR DLTYVGALDDDS
Sbjct: 2202 GAVRVRRRDLTYVGALDDDS 2221
>ref|XP_020254458.1| mediator of RNA polymerase II transcription subunit 12-like isoform
X2 [Asparagus officinalis]
Length = 2238
Score = 93.6 bits (231), Expect = 1e-17
Identities = 47/80 (58%), Positives = 51/80 (63%)
Frame = +2
Query: 2 PSTNXXXXXXXXXXXXXXIEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLK 181
PSTN +EIDPWTLLE+G + V+GDHANLKACSWLK
Sbjct: 2159 PSTNLSTKSKALASLDSDMEIDPWTLLEDGTVSASSSSNSGNVSKVNGDHANLKACSWLK 2218
Query: 182 GAVRVRRTDLTYVGALDDDS 241
GAVRVRR DLTYVGALDDDS
Sbjct: 2219 GAVRVRRRDLTYVGALDDDS 2238
>ref|XP_020254457.1| mediator of RNA polymerase II transcription subunit 12-like isoform
X1 [Asparagus officinalis]
gb|ONK78252.1| uncharacterized protein A4U43_C02F16240 [Asparagus officinalis]
Length = 2241
Score = 93.6 bits (231), Expect = 1e-17
Identities = 47/80 (58%), Positives = 51/80 (63%)
Frame = +2
Query: 2 PSTNXXXXXXXXXXXXXXIEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLK 181
PSTN +EIDPWTLLE+G + V+GDHANLKACSWLK
Sbjct: 2162 PSTNLSTKSKALASLDSDMEIDPWTLLEDGTVSASSSSNSGNVSKVNGDHANLKACSWLK 2221
Query: 182 GAVRVRRTDLTYVGALDDDS 241
GAVRVRR DLTYVGALDDDS
Sbjct: 2222 GAVRVRRRDLTYVGALDDDS 2241
>ref|XP_008811115.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Phoenix dactylifera]
Length = 2240
Score = 90.9 bits (224), Expect = 1e-16
Identities = 46/79 (58%), Positives = 50/79 (63%)
Frame = +2
Query: 5 STNXXXXXXXXXXXXXXIEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKG 184
STN +EIDPWTLLE+G M V GDH+NLKACSWLKG
Sbjct: 2162 STNLSGRSKTVPSQYLDMEIDPWTLLEDGTGSASASGGNSHMIGVGGDHSNLKACSWLKG 2221
Query: 185 AVRVRRTDLTYVGALDDDS 241
AVRVRRTDLTYVG+LDDDS
Sbjct: 2222 AVRVRRTDLTYVGSLDDDS 2240
>ref|XP_020674103.1| mediator of RNA polymerase II transcription subunit 12 isoform X3
[Dendrobium catenatum]
Length = 2239
Score = 90.1 bits (222), Expect = 2e-16
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +2
Query: 59 EIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDD 238
EIDPWTLLE+G G++SGDH+NLKACSWLKGAVR+RRTDLTYVG LDD+
Sbjct: 2179 EIDPWTLLEDGTSCSATSSAGGSAGSISGDHSNLKACSWLKGAVRMRRTDLTYVGVLDDE 2238
Query: 239 S 241
S
Sbjct: 2239 S 2239
>ref|XP_020674102.1| mediator of RNA polymerase II transcription subunit 12 isoform X2
[Dendrobium catenatum]
Length = 2249
Score = 90.1 bits (222), Expect = 2e-16
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +2
Query: 59 EIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDD 238
EIDPWTLLE+G G++SGDH+NLKACSWLKGAVR+RRTDLTYVG LDD+
Sbjct: 2189 EIDPWTLLEDGTSCSATSSAGGSAGSISGDHSNLKACSWLKGAVRMRRTDLTYVGVLDDE 2248
Query: 239 S 241
S
Sbjct: 2249 S 2249
>gb|PKA48041.1| Mediator of RNA polymerase II transcription subunit 12 [Apostasia
shenzhenica]
Length = 2250
Score = 90.1 bits (222), Expect = 2e-16
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +2
Query: 59 EIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDD 238
EIDPWTLLE+G G+VSGDH+NLKAC WL+GAVRVRRTDLTY+G+LDDD
Sbjct: 2190 EIDPWTLLEDGTACAASSAAGSSAGSVSGDHSNLKACCWLRGAVRVRRTDLTYIGSLDDD 2249
Query: 239 S 241
S
Sbjct: 2250 S 2250
>ref|XP_020674100.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Dendrobium catenatum]
ref|XP_020674101.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Dendrobium catenatum]
gb|PKU81255.1| Mediator of RNA polymerase II transcription subunit 12 [Dendrobium
catenatum]
Length = 2263
Score = 90.1 bits (222), Expect = 2e-16
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +2
Query: 59 EIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDD 238
EIDPWTLLE+G G++SGDH+NLKACSWLKGAVR+RRTDLTYVG LDD+
Sbjct: 2203 EIDPWTLLEDGTSCSATSSAGGSAGSISGDHSNLKACSWLKGAVRMRRTDLTYVGVLDDE 2262
Query: 239 S 241
S
Sbjct: 2263 S 2263
>ref|XP_014752317.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
isoform X2 [Brachypodium distachyon]
Length = 2176
Score = 89.7 bits (221), Expect = 3e-16
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +2
Query: 56 IEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDD 235
+E+DPWTLLE+G +SGDHANLKACSWLKGAVRVRRT+LTY+G+LDD
Sbjct: 2115 MEVDPWTLLEDGTSCPSMSSGSNGTSGISGDHANLKACSWLKGAVRVRRTELTYIGSLDD 2174
Query: 236 DS 241
DS
Sbjct: 2175 DS 2176
>ref|XP_010235445.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
isoform X1 [Brachypodium distachyon]
gb|KQK15196.1| hypothetical protein BRADI_1g21177v3 [Brachypodium distachyon]
Length = 2178
Score = 89.7 bits (221), Expect = 3e-16
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +2
Query: 56 IEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDD 235
+E+DPWTLLE+G +SGDHANLKACSWLKGAVRVRRT+LTY+G+LDD
Sbjct: 2117 MEVDPWTLLEDGTSCPSMSSGSNGTSGISGDHANLKACSWLKGAVRVRRTELTYIGSLDD 2176
Query: 236 DS 241
DS
Sbjct: 2177 DS 2178
>ref|XP_006658903.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Oryza brachyantha]
Length = 2198
Score = 89.0 bits (219), Expect = 5e-16
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +2
Query: 56 IEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDD 235
+E+DPWTLLE+G AV+GDH NLKACSWLKGAVRVRRT+LTY+G+LDD
Sbjct: 2137 MEVDPWTLLEDGTSCPSMSSGSNNSSAVAGDHGNLKACSWLKGAVRVRRTELTYIGSLDD 2196
Query: 236 DS 241
DS
Sbjct: 2197 DS 2198
>ref|XP_008804025.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
[Phoenix dactylifera]
ref|XP_008804026.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
[Phoenix dactylifera]
Length = 2234
Score = 89.0 bits (219), Expect = 5e-16
Identities = 44/79 (55%), Positives = 50/79 (63%)
Frame = +2
Query: 5 STNXXXXXXXXXXXXXXIEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKG 184
STN +EIDPWTLLE+G M V GDH+NLKACSWLKG
Sbjct: 2156 STNVSGRNKTVPSQDLDMEIDPWTLLEDGTGSASTSGGNSSMVGVGGDHSNLKACSWLKG 2215
Query: 185 AVRVRRTDLTYVGALDDDS 241
AVRVRR+DLTY+GALD+DS
Sbjct: 2216 AVRVRRSDLTYIGALDEDS 2234
>dbj|BAC79761.1| unknown protein [Oryza sativa Japonica Group]
dbj|BAF22389.1| Os07g0648300 [Oryza sativa Japonica Group]
Length = 360
Score = 86.3 bits (212), Expect = 1e-15
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = +2
Query: 56 IEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDD 235
+E+DPWTLLE+G ++GDH NLKACSWLKGAVRVRRT+LTY+G+LDD
Sbjct: 299 MEVDPWTLLEDGTSCPSMSSGSNSSSGMAGDHGNLKACSWLKGAVRVRRTELTYIGSLDD 358
Query: 236 DS 241
DS
Sbjct: 359 DS 360
>ref|NP_001170168.1| uncharacterized protein LOC100384108 [Zea mays]
gb|ACN36073.1| unknown [Zea mays]
Length = 337
Score = 85.9 bits (211), Expect = 2e-15
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = +2
Query: 56 IEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDD 235
+E+DPW LLE+G V+GDHANLKACSWLKGAVRVRRT+LTY+G+LDD
Sbjct: 276 MEVDPWNLLEDGTSCPSTASGSHGASGVTGDHANLKACSWLKGAVRVRRTELTYIGSLDD 335
Query: 236 DS 241
D+
Sbjct: 336 DT 337
>ref|XP_009379762.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Musa acuminata subsp. malaccensis]
Length = 2224
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/62 (62%), Positives = 46/62 (74%)
Frame = +2
Query: 56 IEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDD 235
+EIDPWTLLE+G MG+ +GDH+NLKAC WLKG VRVRRTDLTY+G LD+
Sbjct: 2163 MEIDPWTLLEDGTNSASASNNSSNMGSTNGDHSNLKACCWLKGTVRVRRTDLTYIGPLDE 2222
Query: 236 DS 241
DS
Sbjct: 2223 DS 2224
>ref|XP_021307272.1| mediator of RNA polymerase II transcription subunit 12 isoform X2
[Sorghum bicolor]
Length = 2199
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/62 (62%), Positives = 46/62 (74%)
Frame = +2
Query: 56 IEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDD 235
+E+DPW LLE+G V+GDHANLKACSWLKGAVRVRRT+LTY+G+LDD
Sbjct: 2138 MEVDPWNLLEDGTSCPSTTSGSNGASGVTGDHANLKACSWLKGAVRVRRTELTYIGSLDD 2197
Query: 236 DS 241
DS
Sbjct: 2198 DS 2199
>ref|XP_002466024.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Sorghum bicolor]
ref|XP_021307271.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Sorghum bicolor]
gb|EER93022.1| hypothetical protein SORBI_3001G540400 [Sorghum bicolor]
Length = 2201
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/62 (62%), Positives = 46/62 (74%)
Frame = +2
Query: 56 IEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDD 235
+E+DPW LLE+G V+GDHANLKACSWLKGAVRVRRT+LTY+G+LDD
Sbjct: 2140 MEVDPWNLLEDGTSCPSTTSGSNGASGVTGDHANLKACSWLKGAVRVRRTELTYIGSLDD 2199
Query: 236 DS 241
DS
Sbjct: 2200 DS 2201
>ref|XP_020598943.1| mediator of RNA polymerase II transcription subunit 12 [Phalaenopsis
equestris]
ref|XP_020598944.1| mediator of RNA polymerase II transcription subunit 12 [Phalaenopsis
equestris]
ref|XP_020598945.1| mediator of RNA polymerase II transcription subunit 12 [Phalaenopsis
equestris]
ref|XP_020598946.1| mediator of RNA polymerase II transcription subunit 12 [Phalaenopsis
equestris]
Length = 2242
Score = 87.0 bits (214), Expect = 2e-15
Identities = 42/61 (68%), Positives = 47/61 (77%)
Frame = +2
Query: 59 EIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDD 238
EIDPWTLLE+G G+VSGDH+NLKACSWLKGAVR+RRTDLTYVG LDD+
Sbjct: 2183 EIDPWTLLEDGTGCSVASVGGSG-GSVSGDHSNLKACSWLKGAVRIRRTDLTYVGVLDDE 2241
Query: 239 S 241
S
Sbjct: 2242 S 2242
>dbj|BAT02934.1| Os07g0648300, partial [Oryza sativa Japonica Group]
Length = 498
Score = 86.3 bits (212), Expect = 3e-15
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = +2
Query: 56 IEIDPWTLLEEGXXXXXXXXXXXXMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDD 235
+E+DPWTLLE+G ++GDH NLKACSWLKGAVRVRRT+LTY+G+LDD
Sbjct: 437 MEVDPWTLLEDGTSCPSMSSGSNSSSGMAGDHGNLKACSWLKGAVRVRRTELTYIGSLDD 496
Query: 236 DS 241
DS
Sbjct: 497 DS 498