BLASTX nr result

ID: Ophiopogon23_contig00011910 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00011910
         (543 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK63816.1| uncharacterized protein A4U43_C07F19240 [Asparagu...    61   4e-09
ref|XP_020250531.1| transcription factor BIM2-like isoform X1 [A...    57   3e-06

>gb|ONK63816.1| uncharacterized protein A4U43_C07F19240 [Asparagus officinalis]
          Length = 85

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 34/55 (61%), Positives = 35/55 (63%)
 Frame = -1

Query: 543 SLGKRAKRPXXXXXXXXXXXXXXXSGNRAMEHSMVGSSGEESGQVLKRHKMDNNS 379
           SLGKRAKRP                GNRAM HSMVGSSGEES Q  KRHK+DNNS
Sbjct: 33  SLGKRAKRPATTSSAKDPDDPSS--GNRAMGHSMVGSSGEESEQATKRHKLDNNS 85


>ref|XP_020250531.1| transcription factor BIM2-like isoform X1 [Asparagus officinalis]
 ref|XP_020250532.1| transcription factor BIM2-like isoform X2 [Asparagus officinalis]
 ref|XP_020250533.1| transcription factor BIM2-like isoform X3 [Asparagus officinalis]
 gb|ONK55021.1| uncharacterized protein A4U43_UnF8520 [Asparagus officinalis]
          Length = 299

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/55 (56%), Positives = 33/55 (60%)
 Frame = -1

Query: 543 SLGKRAKRPXXXXXXXXXXXXXXXSGNRAMEHSMVGSSGEESGQVLKRHKMDNNS 379
           SLGKRAKRP               SGNRAM  SM+GSSGE+  Q  KRHKM NNS
Sbjct: 245 SLGKRAKRPAATSTSSAKDLDDPSSGNRAMARSMIGSSGEDYEQASKRHKMHNNS 299


Top