BLASTX nr result

ID: Ophiopogon23_contig00011730 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00011730
         (372 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020247690.1| carbon catabolite repressor protein 4 homolo...    75   3e-13
ref|XP_020247689.1| carbon catabolite repressor protein 4 homolo...    69   3e-11
ref|XP_020247688.1| carbon catabolite repressor protein 4 homolo...    69   3e-11
ref|XP_020523811.1| carbon catabolite repressor protein 4 homolo...    54   7e-06
ref|XP_011624111.1| carbon catabolite repressor protein 4 homolo...    54   8e-06
ref|XP_020523805.1| carbon catabolite repressor protein 4 homolo...    54   8e-06

>ref|XP_020247690.1| carbon catabolite repressor protein 4 homolog 4-like isoform X3
           [Asparagus officinalis]
          Length = 409

 Score = 75.1 bits (183), Expect = 3e-13
 Identities = 42/56 (75%), Positives = 45/56 (80%)
 Frame = -2

Query: 170 PSPISNSRVFRCKMSATPSAAAIRPKFVALEDGEDPARSVFDGSRFRVVSYNILAQ 3
           PS ISNSRVF+ KMSA P AA I PKFV+LE GEDP  S+F  SRFRVVSYNILAQ
Sbjct: 12  PSYISNSRVFKRKMSAKP-AAPICPKFVSLEVGEDPTTSLFKDSRFRVVSYNILAQ 66


>ref|XP_020247689.1| carbon catabolite repressor protein 4 homolog 4-like isoform X2
           [Asparagus officinalis]
          Length = 411

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 42/60 (70%), Positives = 45/60 (75%), Gaps = 4/60 (6%)
 Frame = -2

Query: 170 PSPISNS----RVFRCKMSATPSAAAIRPKFVALEDGEDPARSVFDGSRFRVVSYNILAQ 3
           PS ISNS    RVF+ KMSA P AA I PKFV+LE GEDP  S+F  SRFRVVSYNILAQ
Sbjct: 12  PSYISNSSSCCRVFKRKMSAKP-AAPICPKFVSLEVGEDPTTSLFKDSRFRVVSYNILAQ 70


>ref|XP_020247688.1| carbon catabolite repressor protein 4 homolog 4-like isoform X1
           [Asparagus officinalis]
 gb|ONK55733.1| uncharacterized protein A4U43_C10F440 [Asparagus officinalis]
          Length = 413

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 42/60 (70%), Positives = 45/60 (75%), Gaps = 4/60 (6%)
 Frame = -2

Query: 170 PSPISNS----RVFRCKMSATPSAAAIRPKFVALEDGEDPARSVFDGSRFRVVSYNILAQ 3
           PS ISNS    RVF+ KMSA P AA I PKFV+LE GEDP  S+F  SRFRVVSYNILAQ
Sbjct: 12  PSYISNSSSCCRVFKRKMSAKP-AAPICPKFVSLEVGEDPTTSLFKDSRFRVVSYNILAQ 70


>ref|XP_020523811.1| carbon catabolite repressor protein 4 homolog 4 isoform X3
           [Amborella trichopoda]
          Length = 338

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 27/50 (54%), Positives = 34/50 (68%)
 Frame = -2

Query: 152 SRVFRCKMSATPSAAAIRPKFVALEDGEDPARSVFDGSRFRVVSYNILAQ 3
           S++ RCKMS    +  I PKF+A+EDG+   R   D S FR+VSYNILAQ
Sbjct: 18  SKISRCKMSNLSPSPPICPKFIAVEDGKHVLRDARDDSIFRLVSYNILAQ 67


>ref|XP_011624111.1| carbon catabolite repressor protein 4 homolog 4 isoform X2
           [Amborella trichopoda]
          Length = 390

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 27/51 (52%), Positives = 34/51 (66%)
 Frame = -2

Query: 155 NSRVFRCKMSATPSAAAIRPKFVALEDGEDPARSVFDGSRFRVVSYNILAQ 3
           + R+ RCKMS    +  I PKF+A+EDG+   R   D S FR+VSYNILAQ
Sbjct: 15  SQRISRCKMSNLSPSPPICPKFIAVEDGKHVLRDARDDSIFRLVSYNILAQ 65


>ref|XP_020523805.1| carbon catabolite repressor protein 4 homolog 4 isoform X1
           [Amborella trichopoda]
          Length = 392

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 27/50 (54%), Positives = 34/50 (68%)
 Frame = -2

Query: 152 SRVFRCKMSATPSAAAIRPKFVALEDGEDPARSVFDGSRFRVVSYNILAQ 3
           S++ RCKMS    +  I PKF+A+EDG+   R   D S FR+VSYNILAQ
Sbjct: 18  SKISRCKMSNLSPSPPICPKFIAVEDGKHVLRDARDDSIFRLVSYNILAQ 67


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