BLASTX nr result
ID: Ophiopogon23_contig00011329
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00011329
(754 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020261344.1| RNA polymerase sigma factor sigF, chloroplas... 287 2e-90
ref|XP_010907040.1| PREDICTED: RNA polymerase sigma factor sigF,... 242 4e-73
ref|XP_008807704.1| PREDICTED: RNA polymerase sigma factor sigF,... 239 6e-73
ref|XP_008779218.1| PREDICTED: RNA polymerase sigma factor sigF,... 239 3e-72
ref|XP_009384040.1| PREDICTED: RNA polymerase sigma factor sigF,... 238 1e-71
ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF,... 233 5e-70
gb|OAY79939.1| RNA polymerase sigma factor sigF, chloroplastic, ... 230 6e-70
ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF,... 233 7e-70
ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF,... 233 1e-69
ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF,... 233 1e-69
ref|XP_020085184.1| RNA polymerase sigma factor sigF, chloroplas... 232 3e-69
gb|PKI57600.1| hypothetical protein CRG98_021928 [Punica granatum] 220 7e-69
ref|XP_020676962.1| RNA polymerase sigma factor sigF, chloroplas... 229 4e-68
gb|PKU65607.1| RNA polymerase sigma factor sigF, chloroplastic [... 228 8e-68
gb|AKC88774.1| sigma factor [Melianthus villosus] 226 2e-67
gb|OVA18028.1| RNA polymerase sigma-70 [Macleaya cordata] 226 3e-67
ref|XP_018812494.1| PREDICTED: RNA polymerase sigma factor sigF,... 213 4e-66
ref|XP_021655825.1| RNA polymerase sigma factor sigF, chloroplas... 221 4e-66
ref|XP_021897328.1| RNA polymerase sigma factor sigF, chloroplas... 223 7e-66
ref|XP_015898520.1| PREDICTED: RNA polymerase sigma factor sigF,... 222 2e-65
>ref|XP_020261344.1| RNA polymerase sigma factor sigF, chloroplastic [Asparagus
officinalis]
gb|ONK72278.1| uncharacterized protein A4U43_C04F17680 [Asparagus officinalis]
Length = 582
Score = 287 bits (735), Expect = 2e-90
Identities = 143/174 (82%), Positives = 158/174 (90%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHFPTNKELAQRVGIRVEKLERLLSNT 180
KAIFQNSRTVRLPENVF LLKK RD RRLCIQ+GH P N+EL++ VGIRVEKLE LL N+
Sbjct: 409 KAIFQNSRTVRLPENVFALLKKIRDARRLCIQEGHIPCNQELSKLVGIRVEKLESLLMNS 468
Query: 181 RNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKF 360
RNP SIQERAW+DQDVT QEITADPEVE PDLMIAKQMMR+HVHNLLGVLN RERQIIKF
Sbjct: 469 RNPLSIQERAWLDQDVTFQEITADPEVETPDLMIAKQMMREHVHNLLGVLNHRERQIIKF 528
Query: 361 RYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
R+GI D++PKSLS+IGAMY ++KERVRQLESRALDKLK CLSS GLEAYI++LI
Sbjct: 529 RFGIQDNKPKSLSDIGAMYDLSKERVRQLESRALDKLKGCLSSEGLEAYIDMLI 582
>ref|XP_010907040.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Elaeis
guineensis]
Length = 570
Score = 242 bits (618), Expect = 4e-73
Identities = 122/174 (70%), Positives = 144/174 (82%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHFPTNKELAQRVGIRVEKLERLLSNT 180
+AIF NSR +RLPENVFGLLK+ ++ RRL IQ+GH PTN+E+A+RVGI VEKLE LL T
Sbjct: 397 RAIFLNSRVIRLPENVFGLLKRIKNARRLFIQEGHAPTNEEIAKRVGISVEKLEALLLTT 456
Query: 181 RNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKF 360
RNP SIQE W DQDV QEITADP VE P+L IAKQMMRQHV LL +L RERQII++
Sbjct: 457 RNPISIQECVWTDQDVKFQEITADPGVETPELSIAKQMMRQHVRGLLRILKPRERQIIQY 516
Query: 361 RYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
R+GI ++E KSL+EIGAM+G++KERVRQLESRALDKLK CL SHGL AY+ LL+
Sbjct: 517 RFGIPNNEQKSLTEIGAMFGLSKERVRQLESRALDKLKGCLPSHGLGAYLELLL 570
>ref|XP_008807704.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Phoenix dactylifera]
Length = 466
Score = 239 bits (609), Expect = 6e-73
Identities = 120/174 (68%), Positives = 143/174 (82%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHFPTNKELAQRVGIRVEKLERLLSNT 180
KAIF NSR +RLPENVFGLLK + RRL IQ+GH PTN+E+A++VGI VE+L+ LL T
Sbjct: 293 KAIFLNSRVIRLPENVFGLLKSIKKARRLFIQEGHAPTNEEIAKQVGISVERLKVLLLTT 352
Query: 181 RNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKF 360
RNP SIQE AW DQDVT QEIT DPEVE PDL +AKQMMRQHV LL +L RERQII++
Sbjct: 353 RNPISIQECAWTDQDVTFQEITGDPEVETPDLSMAKQMMRQHVRGLLRILKPRERQIIQY 412
Query: 361 RYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
R+GI +++PKSL+EIG M+G++KERVRQLESRALDKLK C SHGL AY+ LL+
Sbjct: 413 RFGIPNNKPKSLTEIGVMFGLSKERVRQLESRALDKLKDCRLSHGLGAYLELLL 466
>ref|XP_008779218.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Phoenix dactylifera]
Length = 529
Score = 239 bits (609), Expect = 3e-72
Identities = 120/174 (68%), Positives = 143/174 (82%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHFPTNKELAQRVGIRVEKLERLLSNT 180
KAIF NSR +RLPENVFGLLK + RRL IQ+GH PTN+E+A++VGI VE+L+ LL T
Sbjct: 356 KAIFLNSRVIRLPENVFGLLKSIKKARRLFIQEGHAPTNEEIAKQVGISVERLKVLLLTT 415
Query: 181 RNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKF 360
RNP SIQE AW DQDVT QEIT DPEVE PDL +AKQMMRQHV LL +L RERQII++
Sbjct: 416 RNPISIQECAWTDQDVTFQEITGDPEVETPDLSMAKQMMRQHVRGLLRILKPRERQIIQY 475
Query: 361 RYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
R+GI +++PKSL+EIG M+G++KERVRQLESRALDKLK C SHGL AY+ LL+
Sbjct: 476 RFGIPNNKPKSLTEIGVMFGLSKERVRQLESRALDKLKDCRLSHGLGAYLELLL 529
>ref|XP_009384040.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Musa
acuminata subsp. malaccensis]
Length = 577
Score = 238 bits (608), Expect = 1e-71
Identities = 119/174 (68%), Positives = 143/174 (82%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHFPTNKELAQRVGIRVEKLERLLSNT 180
KAIF+NSRT+RLPEN F LK R+ RRLCIQ+G PTN+E+A+RVGI V+KLE LL N+
Sbjct: 404 KAIFKNSRTIRLPENAFARLKSIREARRLCIQEGLLPTNEEIAKRVGITVQKLEILLLNS 463
Query: 181 RNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKF 360
R P SIQ W+DQDVT QE ADP++EIPDL+IAKQMMRQHV NLL +L RER I+++
Sbjct: 464 RYPISIQRHPWLDQDVTFQETVADPKIEIPDLVIAKQMMRQHVRNLLNILKPRERVIVQY 523
Query: 361 RYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
R+GI SE KSLSEIGAMYG++KERVRQLES+AL KL+ CL S GLEAY++LLI
Sbjct: 524 RFGIRCSEQKSLSEIGAMYGLSKERVRQLESQALGKLRKCLQSQGLEAYLDLLI 577
>ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X4 [Nelumbo nucifera]
Length = 525
Score = 233 bits (594), Expect = 5e-70
Identities = 114/174 (65%), Positives = 143/174 (82%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHFPTNKELAQRVGIRVEKLERLLSNT 180
KAIFQNSRT+RLPENV+ LL + + ++L IQ+GH PTN+ELA+RVGI VEKLERL +T
Sbjct: 352 KAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMST 411
Query: 181 RNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKF 360
R P SIQ+ W DQD T QEITAD EVE PDL +AKQ+MR+HV NL+ +L +ER+II+
Sbjct: 412 RMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKERRIIRM 471
Query: 361 RYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
RYGI+++EPKSL EIG+++G++KERVRQLESRAL KLK CLSS GL AY +LL+
Sbjct: 472 RYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLLV 525
>gb|OAY79939.1| RNA polymerase sigma factor sigF, chloroplastic, partial [Ananas
comosus]
Length = 437
Score = 230 bits (587), Expect = 6e-70
Identities = 115/172 (66%), Positives = 141/172 (81%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHFPTNKELAQRVGIRVEKLERLLSNT 180
KAIFQ+SRT+RLPENVFGLL+K + R+L IQ G+ P N+E+A+ VGI +KLE LL
Sbjct: 259 KAIFQHSRTIRLPENVFGLLRKVKAARKLYIQGGYLPANEEIAKCVGITSQKLESLLLRA 318
Query: 181 RNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKF 360
RNP I++R W DQDVT+QEITADPEVEIPDL I+K MMR+HV + LG+LN RER+II++
Sbjct: 319 RNPVPIRKRVWTDQDVTLQEITADPEVEIPDLNISKAMMREHVRDFLGILNPRERKIIQY 378
Query: 361 RYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINL 516
R+GI D E KSL+EIG MYG++KERVRQLESRALDKLK L S GLEAY++L
Sbjct: 379 RFGIHDGERKSLTEIGRMYGLSKERVRQLESRALDKLKESLPSQGLEAYLHL 430
>ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X3 [Nelumbo nucifera]
Length = 540
Score = 233 bits (594), Expect = 7e-70
Identities = 114/174 (65%), Positives = 143/174 (82%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHFPTNKELAQRVGIRVEKLERLLSNT 180
KAIFQNSRT+RLPENV+ LL + + ++L IQ+GH PTN+ELA+RVGI VEKLERL +T
Sbjct: 367 KAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMST 426
Query: 181 RNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKF 360
R P SIQ+ W DQD T QEITAD EVE PDL +AKQ+MR+HV NL+ +L +ER+II+
Sbjct: 427 RMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKERRIIRM 486
Query: 361 RYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
RYGI+++EPKSL EIG+++G++KERVRQLESRAL KLK CLSS GL AY +LL+
Sbjct: 487 RYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLLV 540
>ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Nelumbo nucifera]
Length = 565
Score = 233 bits (594), Expect = 1e-69
Identities = 114/174 (65%), Positives = 143/174 (82%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHFPTNKELAQRVGIRVEKLERLLSNT 180
KAIFQNSRT+RLPENV+ LL + + ++L IQ+GH PTN+ELA+RVGI VEKLERL +T
Sbjct: 392 KAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMST 451
Query: 181 RNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKF 360
R P SIQ+ W DQD T QEITAD EVE PDL +AKQ+MR+HV NL+ +L +ER+II+
Sbjct: 452 RMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKERRIIRM 511
Query: 361 RYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
RYGI+++EPKSL EIG+++G++KERVRQLESRAL KLK CLSS GL AY +LL+
Sbjct: 512 RYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLLV 565
>ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Nelumbo nucifera]
Length = 568
Score = 233 bits (594), Expect = 1e-69
Identities = 114/174 (65%), Positives = 143/174 (82%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHFPTNKELAQRVGIRVEKLERLLSNT 180
KAIFQNSRT+RLPENV+ LL + + ++L IQ+GH PTN+ELA+RVGI VEKLERL +T
Sbjct: 395 KAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMST 454
Query: 181 RNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKF 360
R P SIQ+ W DQD T QEITAD EVE PDL +AKQ+MR+HV NL+ +L +ER+II+
Sbjct: 455 RMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKERRIIRM 514
Query: 361 RYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
RYGI+++EPKSL EIG+++G++KERVRQLESRAL KLK CLSS GL AY +LL+
Sbjct: 515 RYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLLV 568
>ref|XP_020085184.1| RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Ananas
comosus]
ref|XP_020085185.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Ananas
comosus]
Length = 573
Score = 232 bits (592), Expect = 3e-69
Identities = 117/174 (67%), Positives = 142/174 (81%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHFPTNKELAQRVGIRVEKLERLLSNT 180
KAIFQ+SRT+RLPENVFGLL+K + R+L IQ G+ P N+E+A+ VGI +KLE LL
Sbjct: 400 KAIFQHSRTIRLPENVFGLLRKVKAARKLYIQGGYLPANEEIAKCVGITSQKLESLLLRA 459
Query: 181 RNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKF 360
RNP I++R W DQDVT+QEITADPEVEIPDL I+K MMR+HV N L +LN RER+II++
Sbjct: 460 RNPVPIRKRVWTDQDVTLQEITADPEVEIPDLNISKAMMREHVRNFLRILNPRERKIIQY 519
Query: 361 RYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
R+GI D E KSL+EIG MYG++KERVRQLESRALDKLK L S GLEAY++LLI
Sbjct: 520 RFGIHDGERKSLTEIGRMYGLSKERVRQLESRALDKLKESLPSQGLEAYLHLLI 573
>gb|PKI57600.1| hypothetical protein CRG98_021928 [Punica granatum]
Length = 206
Score = 220 bits (560), Expect = 7e-69
Identities = 105/175 (60%), Positives = 145/175 (82%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHF-PTNKELAQRVGIRVEKLERLLSN 177
KAIFQ+SRT+RLPENV+GLL K + +R +Q+G++ P+ +++A+RVGI V+KLE+L+
Sbjct: 32 KAIFQHSRTIRLPENVYGLLNKVMEAKRSYVQEGNYRPSKEQIAKRVGITVDKLEKLMVT 91
Query: 178 TRNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIK 357
TR P S+Q+ W+DQ+ T QEITAD +EIPD+ + KQ+MRQHV NLLG+L+ +ER+II+
Sbjct: 92 TRTPLSMQQPVWMDQETTFQEITADTGIEIPDVSVTKQLMRQHVRNLLGILSPKERRIIR 151
Query: 358 FRYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
R+GI+D E KSLSEIG ++G++KERVRQLE+RAL KLK CLSSHGL+AY +LL+
Sbjct: 152 LRFGIEDGEQKSLSEIGDIFGLSKERVRQLENRALYKLKQCLSSHGLDAYGDLLV 206
>ref|XP_020676962.1| RNA polymerase sigma factor sigF, chloroplastic [Dendrobium
catenatum]
Length = 575
Score = 229 bits (584), Expect = 4e-68
Identities = 114/173 (65%), Positives = 141/173 (81%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHFPTNKELAQRVGIRVEKLERLLSNT 180
KAIFQ+SRT+RLPENVF LK +D RR+C+Q+G PTN+E+A+R G+ V KL LL +
Sbjct: 402 KAIFQHSRTIRLPENVFAELKIIKDARRICLQEGLTPTNEEVAKRAGMHVGKLVNLLKIS 461
Query: 181 RNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKF 360
RNP SIQ WIDQD+T QEITADPE+EIP+++I KQMMRQHVH+LLGVL+ RER++I+
Sbjct: 462 RNPISIQGHTWIDQDITFQEITADPEIEIPNIIIEKQMMRQHVHSLLGVLSPRERKLIRL 521
Query: 361 RYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLL 519
R+GI SEPKSL +IG M+GI+KERVRQLES+AL KL+AC SS GL AY LL
Sbjct: 522 RFGIQYSEPKSLQQIGDMFGISKERVRQLESQALKKLRACSSSQGLGAYAELL 574
>gb|PKU65607.1| RNA polymerase sigma factor sigF, chloroplastic [Dendrobium
catenatum]
Length = 575
Score = 228 bits (582), Expect = 8e-68
Identities = 114/173 (65%), Positives = 140/173 (80%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHFPTNKELAQRVGIRVEKLERLLSNT 180
KAIFQ+SRT+RLPENVF LK +D RR+C+Q+G PTN+E+A+R G+ V KL LL +
Sbjct: 402 KAIFQHSRTIRLPENVFAELKIIKDARRICLQEGLTPTNEEVAKRAGMHVGKLVNLLKIS 461
Query: 181 RNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKF 360
RNP SIQ WIDQD+T QEITADPE+EIP ++I KQMMRQHVH+LLGVL+ RER++I+
Sbjct: 462 RNPISIQGHTWIDQDITFQEITADPEIEIPKIVIEKQMMRQHVHSLLGVLSPRERKLIRL 521
Query: 361 RYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLL 519
R+GI SEPKSL +IG M+GI+KERVRQLES+AL KL+AC SS GL AY LL
Sbjct: 522 RFGIQYSEPKSLQQIGDMFGISKERVRQLESQALKKLRACSSSQGLGAYAELL 574
>gb|AKC88774.1| sigma factor [Melianthus villosus]
Length = 538
Score = 226 bits (577), Expect = 2e-67
Identities = 109/175 (62%), Positives = 144/175 (82%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDG-HFPTNKELAQRVGIRVEKLERLLSN 177
KAIFQ+SRT+RLPENV+GLL K + +RL IQ+G H PT +++A R+GI V+KLERLL+
Sbjct: 364 KAIFQHSRTIRLPENVYGLLAKVLEAKRLYIQEGNHHPTKEDIAGRIGITVDKLERLLAT 423
Query: 178 TRNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIK 357
TR P SIQ+ W DQ+ T QE+TAD VEIPD+ + KQ+MR+H+ LLG+L+ +ER+II+
Sbjct: 424 TRMPLSIQQPVWADQNTTFQEVTADTAVEIPDISVGKQLMRKHMRGLLGILSSKERRIIR 483
Query: 358 FRYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
R+GI+D E KSLSEIGA++G++KERVRQLESRAL +LK CLSS GLEAY+N+L+
Sbjct: 484 LRFGIEDGEQKSLSEIGAIFGLSKERVRQLESRALHRLKQCLSSQGLEAYVNMLV 538
>gb|OVA18028.1| RNA polymerase sigma-70 [Macleaya cordata]
Length = 562
Score = 226 bits (577), Expect = 3e-67
Identities = 111/173 (64%), Positives = 139/173 (80%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDGHFPTNKELAQRVGIRVEKLERLLSNT 180
KAIFQNSRT+RLPENV+ L++ + + L I++GH PTN+ELA+RVGI VEKLE LL++T
Sbjct: 389 KAIFQNSRTIRLPENVYNALRQVKSAKELFIKEGHQPTNEELAKRVGISVEKLESLLAST 448
Query: 181 RNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKF 360
R P S+Q W DQD T QEITAD EV P+L + K +MR+HV NLL VL +ER+II+
Sbjct: 449 RMPLSMQRPVWSDQDTTFQEITADTEVATPELCVEKNLMRRHVRNLLSVLPPKERRIIRL 508
Query: 361 RYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLL 519
RYGI+D E KSL++IG ++G++KERVRQLE+RALDKLK CLSSHGLEAY NLL
Sbjct: 509 RYGIEDGEQKSLAQIGTVFGLSKERVRQLENRALDKLKKCLSSHGLEAYTNLL 561
>ref|XP_018812494.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Juglans regia]
Length = 206
Score = 213 bits (542), Expect = 4e-66
Identities = 107/175 (61%), Positives = 136/175 (77%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDG-HFPTNKELAQRVGIRVEKLERLLSN 177
KAI+Q+SRT+RLPE V LL K + +RL IQ+G H PTN+ELA+ VGI V KLE+LL
Sbjct: 32 KAIYQHSRTIRLPETVHALLGKMMESKRLLIQEGNHLPTNEELARHVGITVNKLEKLLCT 91
Query: 178 TRNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIK 357
TR P S+Q W DQD T QEIT+D EVEIP++ +AK++MRQH NLL +L+ RER+II+
Sbjct: 92 TRLPLSMQRPVWADQDTTFQEITSDTEVEIPEVSVAKKLMRQHARNLLSILSPRERRIIR 151
Query: 358 FRYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
R+GI+D + KSLSEIG M+G++KERVRQLE+RAL +LK CLSS GL AY LL+
Sbjct: 152 LRFGIEDGKQKSLSEIGNMFGLSKERVRQLENRALHRLKQCLSSEGLVAYTELLV 206
>ref|XP_021655825.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Hevea
brasiliensis]
Length = 475
Score = 221 bits (564), Expect = 4e-66
Identities = 111/175 (63%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDG-HFPTNKELAQRVGIRVEKLERLLSN 177
KAIFQNSRT+RLPENV+ +L K + +R IQ+G H PT +ELA+R GI ++KLERL
Sbjct: 301 KAIFQNSRTIRLPENVYNILGKVMEAKRSYIQEGNHNPTKEELAKRTGITIDKLERLFFM 360
Query: 178 TRNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIK 357
R P S+Q+ W DQD T QEITAD E+EIPD+ AKQ+MRQHV LL +LN +ERQII+
Sbjct: 361 ARIPLSMQQTVWADQDTTFQEITADAEIEIPDVSAAKQLMRQHVRGLLNILNLKERQIIR 420
Query: 358 FRYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
RYGI+D + KSLSEIG ++G++KERVRQLESRAL KLK CL SHGLEAY +LL+
Sbjct: 421 LRYGIEDGKQKSLSEIGNVFGLSKERVRQLESRALYKLKQCLGSHGLEAYADLLV 475
>ref|XP_021897328.1| RNA polymerase sigma factor sigF, chloroplastic [Carica papaya]
Length = 557
Score = 223 bits (568), Expect = 7e-66
Identities = 109/175 (62%), Positives = 144/175 (82%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDG-HFPTNKELAQRVGIRVEKLERLLSN 177
KAIFQ+SRTVRLPENV+ LL K + +R C+++G H+PT +ELA+RVGI V+KLE+LL +
Sbjct: 383 KAIFQHSRTVRLPENVYSLLGKLMEAKRSCVREGSHYPTKEELARRVGITVDKLEKLLFS 442
Query: 178 TRNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIK 357
TR P S+Q+ W DQ+ T QE+TAD +EIPD+ + KQ+MRQHV NLLGVL+ +ER+IIK
Sbjct: 443 TRMPLSMQQAVWADQETTFQEVTADMGIEIPDVSVGKQLMRQHVRNLLGVLSPKERRIIK 502
Query: 358 FRYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
R+GI+D + KSLSEIG ++G++KERVRQLESRAL +LK C++SHGL AY +LLI
Sbjct: 503 LRFGIEDGKQKSLSEIGEIFGLSKERVRQLESRALYRLKQCMNSHGLGAYSDLLI 557
>ref|XP_015898520.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic
[Ziziphus jujuba]
Length = 567
Score = 222 bits (566), Expect = 2e-65
Identities = 110/175 (62%), Positives = 141/175 (80%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 KAIFQNSRTVRLPENVFGLLKKTRDERRLCIQDG-HFPTNKELAQRVGIRVEKLERLLSN 177
KAIFQ+SRT+RLPENV+ L K D +RL IQ+G H+P+ ++LA+RVGI VEKLE+LL
Sbjct: 393 KAIFQHSRTIRLPENVYTQLAKVLDAKRLYIQEGNHYPSKEDLAKRVGITVEKLEKLLFT 452
Query: 178 TRNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIK 357
TR P S+Q+R W DQD T QEITAD +EIPD+ +AKQ+MR+HV NLL +L +RERQII+
Sbjct: 453 TRMPLSMQQRVWADQDTTFQEITADTGIEIPDVSVAKQLMRKHVRNLLSILGQRERQIIR 512
Query: 358 FRYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKACLSSHGLEAYINLLI 522
R+GI+ KSLSEIG +YG++KERVRQ+ESRAL KL+ CL SHGL+AY +LL+
Sbjct: 513 LRFGIEGGNHKSLSEIGNIYGLSKERVRQIESRALYKLRQCLGSHGLDAYADLLL 567