BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00010999
         (727 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_105280125.1| hypothetical protein [Escherichia coli] >gi|...   300   7e-99
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   307   2e-94
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   281   1e-83
ref|XP_015638684.1| PREDICTED: uncharacterized protein LOC107281...   266   1e-81
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   275   3e-81
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   275   3e-81
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]         263   6e-81
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024...   273   1e-80
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   269   3e-80
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   271   4e-80
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]   259   2e-79
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   264   2e-78
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     266   2e-78
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     266   2e-78
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   266   3e-78
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     263   2e-77
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo...   263   6e-77
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     261   8e-77
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo...   247   1e-75
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     258   1e-75

>ref|WP_105280125.1| hypothetical protein [Escherichia coli]
 gb|PPY92707.1| hypothetical protein C5P31_25810 [Escherichia coli]
          Length = 324

 Score =  300 bits (768), Expect = 7e-99
 Identities = 151/219 (68%), Positives = 177/219 (80%), Gaps = 1/219 (0%)
 Frame = -2

Query: 654 DSIAANRPKRQIHKPSRFNDMVAYALPVEFCEDSIPSTVREAELSSESSRWREAMVEEME 475
           +SIA +RPKR I KP R  + VA A  +    D +P+T ++A  SSE  +WR AM EEM+
Sbjct: 77  ESIATSRPKRTITKPVRLIETVACATSI--VADDVPTTYKDAVQSSEEDKWRIAMNEEMQ 134

Query: 474 SLHKNNTWELAKLPKGKRAIGCKWVFAKKEGSQSD-GVRFKARLVAKGYAQMEGIDYNEV 298
           SL++N+TW+LA LPKGK+AIGCKWVFAKKEG  +   VR+KARLVAKGYAQ EGIDYNEV
Sbjct: 135 SLYQNHTWKLANLPKGKKAIGCKWVFAKKEGFPNQVDVRYKARLVAKGYAQKEGIDYNEV 194

Query: 297 FSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMVQPAGFKAAGDEKLVC 118
           FSPVVKHSSIRI+LALVAQ DL+LVQ+DVKTAFLHG+L+EEIYM QP GFK AG E +VC
Sbjct: 195 FSPVVKHSSIRIMLALVAQLDLELVQMDVKTAFLHGNLEEEIYMTQPEGFKVAGKENMVC 254

Query: 117 KLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDPCVY 1
           KL+KSLYGLKQS RQWYK+FD FM  +GY RS YD CVY
Sbjct: 255 KLEKSLYGLKQSSRQWYKRFDEFMLRQGYKRSKYDHCVY 293


>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1032

 Score =  307 bits (787), Expect = 2e-94
 Identities = 153/219 (69%), Positives = 175/219 (79%), Gaps = 1/219 (0%)
 Frame = -2

Query: 654  DSIAANRPKRQIHKPSRFNDMVAYALPVEFCEDSIPSTVREAELSSESSRWREAMVEEME 475
            +SIA  +PKR    P+R+ DMV+YA PV    D IP+T  EA   SE  +WR AM EEME
Sbjct: 546  ESIALRKPKRTTIMPARYVDMVSYASPV--ASDDIPTTYIEAVKGSEEDKWRSAMSEEME 603

Query: 474  SLHKNNTWELAKLPKGKRAIGCKWVFAKKEG-SQSDGVRFKARLVAKGYAQMEGIDYNEV 298
            SL +N TW+LA LPKGK+AIGCKWV+AKK+G S    VR+KARLVAKGYAQ EGIDYNEV
Sbjct: 604  SLRRNQTWKLANLPKGKKAIGCKWVYAKKDGFSDKSEVRYKARLVAKGYAQKEGIDYNEV 663

Query: 297  FSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMVQPAGFKAAGDEKLVC 118
            FSPVVKHSSIR+LLALVAQ D++LVQ+DVKTAFLHGDL+EEIYM QP GFK AG E + C
Sbjct: 664  FSPVVKHSSIRVLLALVAQLDMELVQMDVKTAFLHGDLEEEIYMTQPEGFKVAGKENMFC 723

Query: 117  KLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDPCVY 1
            KL+KSLYGLKQSPRQWYK+FD FM  + YTRS YD CVY
Sbjct: 724  KLEKSLYGLKQSPRQWYKRFDKFMLRQKYTRSKYDHCVY 762


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  281 bits (719), Expect = 1e-83
 Identities = 144/244 (59%), Positives = 180/244 (73%), Gaps = 5/244 (2%)
 Frame = -2

Query: 717  EQDQGQSVQGSRRQDQGLRVQDSIAANRPKRQ-IHKPSR--FNDMVAYALPV-EFCEDSI 550
            E+DQ    +    +     +  SIA +RP+R  +  P+R  F DMV YAL V E  + S 
Sbjct: 731  EEDQEPQTETDIPESMPSDIHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSE 790

Query: 549  PSTVREAELSSESSRWREAMVEEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEG-SQS 373
            PST +EA LSS+S +W  AM +EMESLHKN TW+L   P G++ I CKWVF KKEG S +
Sbjct: 791  PSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPA 850

Query: 372  DGVRFKARLVAKGYAQMEGIDYNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLH 193
            +GV++KAR+VA+G+ Q EG+DYNE+FSPVV+H+SIR+LLA+VA  +L+L QLDVKTAFLH
Sbjct: 851  EGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLH 910

Query: 192  GDLDEEIYMVQPAGFKAAGDEKLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYD 13
            G+L+EEIYM QP GF+  G E  VCKLKKSLYGLKQSPRQWYK+FD +M   GYTRS YD
Sbjct: 911  GELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYD 970

Query: 12   PCVY 1
             CVY
Sbjct: 971  CCVY 974


>ref|XP_015638684.1| PREDICTED: uncharacterized protein LOC107281003 [Oryza sativa
            Japonica Group]
          Length = 651

 Score =  266 bits (680), Expect = 1e-81
 Identities = 136/223 (60%), Positives = 169/223 (75%), Gaps = 6/223 (2%)
 Frame = -2

Query: 651  SIAANRPKRQIHKPSRFND---MVAYALPV--EFCEDSIPSTVREAELSSESSRWREAMV 487
            SIA +RPKR    P R+ +   +VAYAL V  E   ++ PST  +A +S + +RW  AM 
Sbjct: 338  SIAKDRPKRNTKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMH 397

Query: 486  EEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEG-SQSDGVRFKARLVAKGYAQMEGID 310
            +EMESL KN++WEL KLPK K+ I CKW+F +KEG S SD  R+KARLVAKGY+Q+ GID
Sbjct: 398  DEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGID 457

Query: 309  YNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMVQPAGFKAAGDE 130
            +N+VFSPVVKHSSIR LL++VA +D +L Q+DVKTAFLHG+L+E+IYM QP GF   G E
Sbjct: 458  FNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKE 517

Query: 129  KLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDPCVY 1
             LVC+LKKSLYGLKQSPRQWYK+FD FM  + + RS YD CVY
Sbjct: 518  NLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 560


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  275 bits (703), Expect = 3e-81
 Identities = 145/243 (59%), Positives = 171/243 (70%), Gaps = 1/243 (0%)
 Frame = -2

Query: 726  TAVEQDQGQSVQGSRRQDQGLRVQDSIAANRPKRQIHKPSRFNDMVAYALPVEFCEDSIP 547
            T+V+ DQ + VQ S   +       SIA  R KRQI    R+ ++V++AL V       P
Sbjct: 1243 TSVQDDQVE-VQDSDEDESPQEKPYSIATGRTKRQIKPNPRYANLVSFALSVAESIGIEP 1301

Query: 546  STVREAELSSESSRWREAMVEEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEGSQS-D 370
            S+  EA    ES++W  AM EE+ESLHKN+TWEL K P  ++ +GCKWVF KKEG    +
Sbjct: 1302 SSYNEAVTCDESAQWAIAMSEEIESLHKNHTWELVKPPSNQKIVGCKWVFKKKEGILGVE 1361

Query: 369  GVRFKARLVAKGYAQMEGIDYNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHG 190
              RFKARLVAKG+ Q EGIDYNEVFSPVVKHSSIR+LLA+VA+ DL+L QLDVKTAFLHG
Sbjct: 1362 ATRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHG 1421

Query: 189  DLDEEIYMVQPAGFKAAGDEKLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDP 10
            +L+E IYM QP GF   G E  VC LKKSLYGLKQSPRQWYK+FD FM   GYTR  YD 
Sbjct: 1422 ELEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDA 1481

Query: 9    CVY 1
            CVY
Sbjct: 1482 CVY 1484


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  275 bits (703), Expect = 3e-81
 Identities = 145/243 (59%), Positives = 171/243 (70%), Gaps = 1/243 (0%)
 Frame = -2

Query: 726  TAVEQDQGQSVQGSRRQDQGLRVQDSIAANRPKRQIHKPSRFNDMVAYALPVEFCEDSIP 547
            T+V+ DQ + VQ S   +       SIA  R KRQI    R+ ++V++AL V       P
Sbjct: 1264 TSVQDDQVE-VQDSDEDESPQEKPYSIATGRTKRQIKPNPRYANLVSFALSVAESIGIEP 1322

Query: 546  STVREAELSSESSRWREAMVEEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEGSQS-D 370
            S+  EA    ES++W  AM EE+ESLHKN+TWEL K P  ++ +GCKWVF KKEG    +
Sbjct: 1323 SSYNEAVTCDESAQWAIAMSEEIESLHKNHTWELVKPPSNQKIVGCKWVFKKKEGILGVE 1382

Query: 369  GVRFKARLVAKGYAQMEGIDYNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHG 190
              RFKARLVAKG+ Q EGIDYNEVFSPVVKHSSIR+LLA+VA+ DL+L QLDVKTAFLHG
Sbjct: 1383 ATRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHG 1442

Query: 189  DLDEEIYMVQPAGFKAAGDEKLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDP 10
            +L+E IYM QP GF   G E  VC LKKSLYGLKQSPRQWYK+FD FM   GYTR  YD 
Sbjct: 1443 ELEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDA 1502

Query: 9    CVY 1
            CVY
Sbjct: 1503 CVY 1505


>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
          Length = 621

 Score =  263 bits (673), Expect = 6e-81
 Identities = 137/240 (57%), Positives = 172/240 (71%), Gaps = 6/240 (2%)
 Frame = -2

Query: 702 QSVQGSRRQDQGLRVQDSIAANRPKRQIHKPSRFND---MVAYALPV--EFCEDSIPSTV 538
           +++    RQ      + SIA  +PKR    P R+ +   +VAYAL V  E   ++ PST 
Sbjct: 146 ETIDVRERQHHEQSPKRSIAKEKPKRSTKPPQRYIEEANIVAYALSVAEEIEGNAEPSTY 205

Query: 537 REAELSSESSRWREAMVEEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEG-SQSDGVR 361
            EA +S + +RW  AM +EMESL KN+TWEL KLPK K+ I CKW+F +KE  S SD   
Sbjct: 206 SEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKECISPSDEAM 265

Query: 360 FKARLVAKGYAQMEGIDYNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLD 181
           +KARLVAKGY+Q+ GID+N+VFSPVVKHSSIR LL++VA +D +L Q+DVKTAFLHG+L+
Sbjct: 266 YKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELE 325

Query: 180 EEIYMVQPAGFKAAGDEKLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDPCVY 1
           E+IYM QP GF   G E LVC+LKKSLYGLKQSPRQWYK+FD FM  + + RS YD CVY
Sbjct: 326 EDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 385


>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
          Length = 1892

 Score =  273 bits (698), Expect = 1e-80
 Identities = 140/248 (56%), Positives = 173/248 (69%), Gaps = 6/248 (2%)
 Frame = -2

Query: 726  TAVEQDQGQSVQGSRRQDQGLRVQDSIAANRPKRQIHKPSRFNDMV-----AYALPVEFC 562
            T     + QS +    ++       +IA  R KR+I KP R  +       A+    E  
Sbjct: 1314 TKKRDQETQSDESKDAEELASNEPYTIAKGRDKRRIRKPERLIEQENLIAQAFVAAEEEI 1373

Query: 561  EDSIPSTVREAELSSESSRWREAMVEEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEG 382
            +D  PS+  EA    ++++W+ AM+EEMESLH+N TW L K PKG R +GCKWV+ KKEG
Sbjct: 1374 KDLEPSSYIEATSCKDAAQWQLAMMEEMESLHRNETWVLVKRPKGMRTVGCKWVYKKKEG 1433

Query: 381  -SQSDGVRFKARLVAKGYAQMEGIDYNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKT 205
              + +  RFKARLVAKG++Q EGIDYNE+FSPVVKHSSIR+LLALVAQ+DL+L QLDVKT
Sbjct: 1434 IPEVEAARFKARLVAKGFSQKEGIDYNEIFSPVVKHSSIRVLLALVAQFDLELQQLDVKT 1493

Query: 204  AFLHGDLDEEIYMVQPAGFKAAGDEKLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTR 25
            AFLHGDL+E IYM QP GF A G E  VC+LKKSLYGLKQSPRQWYK+FD FM   G++R
Sbjct: 1494 AFLHGDLEETIYMDQPEGFLAEGKEDHVCQLKKSLYGLKQSPRQWYKRFDAFMTTHGFSR 1553

Query: 24   SPYDPCVY 1
            S +D CVY
Sbjct: 1554 SAFDSCVY 1561


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1032

 Score =  269 bits (688), Expect = 3e-80
 Identities = 135/222 (60%), Positives = 168/222 (75%), Gaps = 5/222 (2%)
 Frame = -2

Query: 651  SIAANRPKRQIHKPSRFND--MVAYALPV--EFCEDSIPSTVREAELSSESSRWREAMVE 484
            +IA +R +RQI  P+R+ D  + AYAL +  E  +D  P++  EA    +S++W  AM E
Sbjct: 473  NIARDRTRRQIKLPARYTDDNLTAYALSIAQEVNDDVEPASYSEAVSCVDSAKWLVAMNE 532

Query: 483  EMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEGSQS-DGVRFKARLVAKGYAQMEGIDY 307
            E+ESLHKNNTW L KLPKGKR + CKW++ KK+G    +  R KARLV KG+ Q EGID+
Sbjct: 533  EIESLHKNNTWNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEGIDF 592

Query: 306  NEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMVQPAGFKAAGDEK 127
            NE+FSPVV+H+SIRILLA VA +DL+L QLDVKTAFLHG+L+EEIYM QP GF     E 
Sbjct: 593  NEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEH 652

Query: 126  LVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDPCVY 1
            LVC+LKKSLYGLKQ+PRQWYKKFD FM G+GY+RS YD C+Y
Sbjct: 653  LVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIY 694


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  271 bits (694), Expect = 4e-80
 Identities = 138/223 (61%), Positives = 170/223 (76%), Gaps = 6/223 (2%)
 Frame = -2

Query: 651  SIAANRPKRQIHKPSRFND---MVAYALPV--EFCEDSIPSTVREAELSSESSRWREAMV 487
            SIA +RPKR I  P R+ +   +VAYAL V  E   ++ PST  EA +S + +RW  AM 
Sbjct: 984  SIAKDRPKRNIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMH 1043

Query: 486  EEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEG-SQSDGVRFKARLVAKGYAQMEGID 310
            +EMESL KN+TWEL KLPK K+ I CKW+F +KEG S SD  R+KARL+AKGY+Q+ GID
Sbjct: 1044 DEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPGID 1103

Query: 309  YNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMVQPAGFKAAGDE 130
            +N+VFSPVVKHSSIR LL++VA +D +L Q+DVKTAFLHG+L+E+IYM QP GF   G E
Sbjct: 1104 FNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKE 1163

Query: 129  KLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDPCVY 1
             LVC+LKKSLYGLKQSPRQWYK+FD FM  + + RS YD CVY
Sbjct: 1164 NLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 1206


>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
          Length = 595

 Score =  259 bits (661), Expect = 2e-79
 Identities = 132/241 (54%), Positives = 172/241 (71%), Gaps = 3/241 (1%)
 Frame = -2

Query: 714 QDQGQSVQGSRRQDQGLRVQDSIAANRPKRQIHKPSR--FNDMVAYALPVEFCEDSIPST 541
           +D  ++ + S  +DQ      SIA ++P+R I  P+R  F D+V+YAL         P T
Sbjct: 110 EDHARNARKSSSEDQQ---HHSIAIDKPRRTIKPPTRYGFEDLVSYAL---ITSSKDPIT 163

Query: 540 VREAELSSESSRWREAMVEEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEG-SQSDGV 364
            +EA  + E SRW  AMVEE++ LHKN TW+L + P+GKRAIGCKWV+ KKE  S+ +G 
Sbjct: 164 FQEAIHNQEKSRWMGAMVEEIQFLHKNQTWDLVEPPEGKRAIGCKWVYKKKEAISKKEGE 223

Query: 363 RFKARLVAKGYAQMEGIDYNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDL 184
           +FKARLVAKGY+Q +G+DY+E+FSP+V+H+SIR +L LVA +D+ L Q+DV+T FLHGDL
Sbjct: 224 KFKARLVAKGYSQRKGVDYDEIFSPMVRHTSIRTVLGLVAHFDMQLEQMDVETTFLHGDL 283

Query: 183 DEEIYMVQPAGFKAAGDEKLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDPCV 4
           +E +YMVQP GF   G E LVCKL+KSLYGLKQSPRQWYK FD ++   GY R  YD  V
Sbjct: 284 EELVYMVQPEGFIQPGQEHLVCKLRKSLYGLKQSPRQWYKCFDSYIIRIGYKRCEYDCFV 343

Query: 3   Y 1
           Y
Sbjct: 344 Y 344


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  264 bits (674), Expect = 2e-78
 Identities = 134/223 (60%), Positives = 168/223 (75%), Gaps = 6/223 (2%)
 Frame = -2

Query: 651  SIAANRPKRQIHKPSRFND---MVAYALPV--EFCEDSIPSTVREAELSSESSRWREAMV 487
            SIA ++PKR I  P R+ +   +VAYAL V  E   ++ PS   EA +S + +RW   M 
Sbjct: 519  SIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSIYSEAIVSDDCNRWITTMH 578

Query: 486  EEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEG-SQSDGVRFKARLVAKGYAQMEGID 310
            +EMESL KN+TWEL KLPK K++I CKW+F +KEG S SD  R+KARLVAKGY+Q+  ID
Sbjct: 579  DEMESLEKNHTWELVKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPSID 638

Query: 309  YNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMVQPAGFKAAGDE 130
            +N+VFSP+VKHSSIR LL++VA +D +L Q+DVKTAFLHG+L+E+IYM QP GF   G E
Sbjct: 639  FNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKE 698

Query: 129  KLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDPCVY 1
             LVC+LKKSLYGLKQSPRQWYK+FD FM  + + RS YD CVY
Sbjct: 699  NLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVY 741


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  266 bits (680), Expect = 2e-78
 Identities = 136/223 (60%), Positives = 169/223 (75%), Gaps = 6/223 (2%)
 Frame = -2

Query: 651  SIAANRPKRQIHKPSRFND---MVAYALPV--EFCEDSIPSTVREAELSSESSRWREAMV 487
            SIA +RPKR    P R+ +   +VAYAL V  E   ++ PST  +A +S + +RW  AM 
Sbjct: 686  SIAKDRPKRNTKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMH 745

Query: 486  EEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEG-SQSDGVRFKARLVAKGYAQMEGID 310
            +EMESL KN++WEL KLPK K+ I CKW+F +KEG S SD  R+KARLVAKGY+Q+ GID
Sbjct: 746  DEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGID 805

Query: 309  YNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMVQPAGFKAAGDE 130
            +N+VFSPVVKHSSIR LL++VA +D +L Q+DVKTAFLHG+L+E+IYM QP GF   G E
Sbjct: 806  FNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKE 865

Query: 129  KLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDPCVY 1
             LVC+LKKSLYGLKQSPRQWYK+FD FM  + + RS YD CVY
Sbjct: 866  NLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 908


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  266 bits (680), Expect = 2e-78
 Identities = 135/223 (60%), Positives = 168/223 (75%), Gaps = 6/223 (2%)
 Frame = -2

Query: 651  SIAANRPKRQIHKPSRFND---MVAYALPV--EFCEDSIPSTVREAELSSESSRWREAMV 487
            SIA ++PKR I  P R+ +   +VAYAL V  E   ++ PST  EA +S + +RW  AM 
Sbjct: 812  SIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMH 871

Query: 486  EEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEG-SQSDGVRFKARLVAKGYAQMEGID 310
            +EMESL KN+TWE  KLPK K+ I CKW+F +KEG S SD  R+KARLVAKGY+Q+ GID
Sbjct: 872  DEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGID 931

Query: 309  YNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMVQPAGFKAAGDE 130
            +N+VFSP++KHSSIR LL +VA +D +L Q+DVKTAFLHG+L+E+IYM QP GF   G E
Sbjct: 932  FNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKE 991

Query: 129  KLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDPCVY 1
             LVC+LKKSLYGLKQSPRQWYK+FD FM  + + RS YD CVY
Sbjct: 992  NLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 1034


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  266 bits (680), Expect = 3e-78
 Identities = 135/223 (60%), Positives = 168/223 (75%), Gaps = 6/223 (2%)
 Frame = -2

Query: 651  SIAANRPKRQIHKPSRFND---MVAYALPV--EFCEDSIPSTVREAELSSESSRWREAMV 487
            SIA ++PKR I  P R+ +   +VAYAL V  E   ++ PST  EA +S + +RW  AM 
Sbjct: 812  SIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMH 871

Query: 486  EEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEG-SQSDGVRFKARLVAKGYAQMEGID 310
            +EMESL KN+TWE  KLPK K+ I CKW+F +KEG S SD  R+KARLVAKGY+Q+ GID
Sbjct: 872  DEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGID 931

Query: 309  YNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMVQPAGFKAAGDE 130
            +N+VFSP++KHSSIR LL +VA +D +L Q+DVKTAFLHG+L+E+IYM QP GF   G E
Sbjct: 932  FNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKE 991

Query: 129  KLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDPCVY 1
             LVC+LKKSLYGLKQSPRQWYK+FD FM  + + RS YD CVY
Sbjct: 992  NLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 1034


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  263 bits (672), Expect = 2e-77
 Identities = 135/223 (60%), Positives = 168/223 (75%), Gaps = 6/223 (2%)
 Frame = -2

Query: 651  SIAANRPKRQIHKPSRFND---MVAYALPV--EFCEDSIPSTVREAELSSESSRWREAMV 487
            SIA ++PKR I  P R+ +   +VAYAL V  +   ++ PST  EA +S + +RW  AM 
Sbjct: 749  SIAKDKPKRNIKPPRRYIEEAKIVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMH 808

Query: 486  EEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEG-SQSDGVRFKARLVAKGYAQMEGID 310
            +EMESL KN+TWEL KLPK K+ I CKW+F +KEG S SD  R+KARLVAKGY+Q+ GID
Sbjct: 809  DEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGID 868

Query: 309  YNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMVQPAGFKAAGDE 130
            +N+VFSPVVKHSSIR LL +VA +D +L Q++VKTAFLHG+L+E+IYM QP GF   G E
Sbjct: 869  FNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKE 928

Query: 129  KLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDPCVY 1
             LVC+LKKSLYGLKQSPRQWYK+FD FM  + +  S YD CVY
Sbjct: 929  NLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVY 971


>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
            baccatum]
          Length = 1526

 Score =  263 bits (671), Expect = 6e-77
 Identities = 139/253 (54%), Positives = 175/253 (69%), Gaps = 11/253 (4%)
 Frame = -2

Query: 726  TAVEQDQGQSVQGSRRQD----QGLRVQDSIAANRPKRQIHKPSRF----NDMVAYALPV 571
            +  ++D+  + Q S RQ     +GL    S+A   P+++  KP++     +  +AYAL V
Sbjct: 402  STTQEDEVTAEQMSPRQHPPQRRGLPQPWSMAQELPQQRPRKPTQRLITESANIAYALTV 461

Query: 570  --EFCEDSIPSTVREAELSSESSRWREAMVEEMESLHKNNTWELAKLPKGKRAIGCKWVF 397
              E  ED  P    EA    +S++W  AM EE+ESL KN TW+L  LP+GKR I CKW+F
Sbjct: 462  AQEMGEDGEPKNYSEAISGDDSAKWTAAMQEEVESLLKNETWDLVMLPEGKRVISCKWIF 521

Query: 396  AKKEGSQS-DGVRFKARLVAKGYAQMEGIDYNEVFSPVVKHSSIRILLALVAQYDLDLVQ 220
             +KEG    +  R+KAR V +G+ Q EGID+NEVFSPVV+HSSIR+LLALVA YDL+L Q
Sbjct: 522  KRKEGIPGVENARYKARFVVRGFDQQEGIDFNEVFSPVVRHSSIRVLLALVALYDLELEQ 581

Query: 219  LDVKTAFLHGDLDEEIYMVQPAGFKAAGDEKLVCKLKKSLYGLKQSPRQWYKKFDGFMQG 40
            LDVKTAFLHG+L+EEIY+ QP GF   G E  VC+LKKSLYGLKQSPRQWYK+FD FM G
Sbjct: 582  LDVKTAFLHGNLEEEIYIQQPEGFVVPGKENHVCRLKKSLYGLKQSPRQWYKRFDSFMTG 641

Query: 39   KGYTRSPYDPCVY 1
             GY+RS YD CVY
Sbjct: 642  HGYSRSSYDNCVY 654


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  261 bits (668), Expect = 8e-77
 Identities = 139/248 (56%), Positives = 177/248 (71%), Gaps = 6/248 (2%)
 Frame = -2

Query: 726  TAVEQDQGQSVQGSRRQDQGLRVQDSIAANRPKRQIHKPSRFND---MVAYALPV--EFC 562
            + +E     +VQ S ++        SIA ++PKR I  P R+ +   +VAYAL V  E  
Sbjct: 639  SVIEDSDSSAVQQSPKR--------SIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIE 690

Query: 561  EDSIPSTVREAELSSESSRWREAMVEEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEG 382
             ++ PST  EA +S   +RW  AM +EMESL KN+TWEL KLPK K+ I CKW+F +K+G
Sbjct: 691  GNAEPSTYSEAIVSDGCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKG 750

Query: 381  -SQSDGVRFKARLVAKGYAQMEGIDYNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKT 205
             S SD  R+KARLVAKGY+Q+ GID+N+VFSPV+KHSSIR LL++VA +D +L Q+DVKT
Sbjct: 751  MSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMDVKT 810

Query: 204  AFLHGDLDEEIYMVQPAGFKAAGDEKLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTR 25
            AFLHG+L+E+IYM QP GF   G E LV +LKKSLYGLKQSPRQWYK+FD FM  + + R
Sbjct: 811  AFLHGELEEDIYMEQPEGFVVPGKENLVYRLKKSLYGLKQSPRQWYKRFDSFMFSQKFRR 870

Query: 24   SPYDPCVY 1
            S YD CVY
Sbjct: 871  SNYDSCVY 878


>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 530

 Score =  247 bits (631), Expect = 1e-75
 Identities = 130/238 (54%), Positives = 166/238 (69%), Gaps = 13/238 (5%)
 Frame = -2

Query: 675 DQGLRVQD---SIAANRPKRQIHKPSRFNDM--------VAYALPV-EFCEDSIPSTVRE 532
           +Q   VQ+   SIA  R +R+I KP+R+ D+        VAYAL V E  +   P + +E
Sbjct: 139 EQSSNVQEEPQSIATRRTRREIRKPTRYADVTNVVDTNSVAYALLVGENLDSDEPKSYKE 198

Query: 531 AELSSESSRWREAMVEEMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEGSQS-DGVRFK 355
           A  S E+S+W  AM EEM+SL KN TWEL  LP+G + +GCKWV  +KEG    +  RFK
Sbjct: 199 AIQSKEASKWLIAMDEEMQSLKKNQTWELVPLPRGVKPVGCKWVLKRKEGIPGVEPSRFK 258

Query: 354 ARLVAKGYAQMEGIDYNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEE 175
           ARLVAKG++Q EGIDY+EVFSPVVKH +IR+LLA+V+  D+ L QL+VK AFLHG+L+E+
Sbjct: 259 ARLVAKGFSQKEGIDYHEVFSPVVKHKTIRVLLAMVSALDMKLEQLNVKIAFLHGNLEEQ 318

Query: 174 IYMVQPAGFKAAGDEKLVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDPCVY 1
           +YM QP GF   G +  VC LKKSLYGLKQSPRQWYK+FD FM    + R+ +D CVY
Sbjct: 319 VYMSQPDGFLEVGKKNHVCLLKKSLYGLKQSPRQWYKRFDAFMISYNFVRNEFDNCVY 376


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  258 bits (660), Expect = 1e-75
 Identities = 130/222 (58%), Positives = 161/222 (72%), Gaps = 5/222 (2%)
 Frame = -2

Query: 651  SIAANRPKRQIHKPSRFN----DMVAYALPVEFCEDSIPSTVREAELSSESSRWREAMVE 484
            SIA ++PKR      RF     + V+ AL +       P+T  +A  S ES+ W  AM E
Sbjct: 747  SIALDKPKRNRKPIQRFGFEPEEDVSRALSIS---QGDPTTYEDAIESVESAGWIGAMTE 803

Query: 483  EMESLHKNNTWELAKLPKGKRAIGCKWVFAKKEG-SQSDGVRFKARLVAKGYAQMEGIDY 307
            EMESLHKN+ WEL   PK ++ +GCKWVF KKEG  + D + +KARLVAKGY+Q EG+DY
Sbjct: 804  EMESLHKNSVWELVPKPKERKLVGCKWVFRKKEGIHEDDAITYKARLVAKGYSQKEGVDY 863

Query: 306  NEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMVQPAGFKAAGDEK 127
            +E+FSPVVKH+SIR+LL++ AQYD+++ Q+DVKTAFLHGDL+E+IYM QP GF   G E 
Sbjct: 864  DEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKEN 923

Query: 126  LVCKLKKSLYGLKQSPRQWYKKFDGFMQGKGYTRSPYDPCVY 1
            LVC+LKKSLYGLKQSPRQWYK FD +M   GYTR  YD CVY
Sbjct: 924  LVCRLKKSLYGLKQSPRQWYKPFDTYMLKIGYTRCQYDCCVY 965