BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00010940
         (1700 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251395.1| DNA-directed RNA polymerase 3B, chloroplasti...   999   0.0  
ref|XP_020109600.1| DNA-directed RNA polymerase 3B, chloroplasti...   991   0.0  
ref|XP_009400360.1| PREDICTED: DNA-directed RNA polymerase 3B, c...   983   0.0  
gb|OAY70002.1| DNA-directed RNA polymerase 3, chloroplastic [Ana...   982   0.0  
ref|XP_018683779.1| PREDICTED: DNA-directed RNA polymerase 3B, c...   979   0.0  
ref|XP_010904633.1| PREDICTED: DNA-directed RNA polymerase 3B, c...   978   0.0  
ref|XP_020699293.1| DNA-directed RNA polymerase 3, chloroplastic...   974   0.0  
gb|ONK78853.1| uncharacterized protein A4U43_C01F240 [Asparagus ...   971   0.0  
ref|XP_020597755.1| DNA-directed RNA polymerase 3, chloroplastic...   970   0.0  
gb|OVA10304.1| DNA-directed RNA polymerase [Macleaya cordata]         954   0.0  
emb|CBI36559.3| unnamed protein product, partial [Vitis vinifera]     949   0.0  
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   949   0.0  
ref|XP_010273705.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   947   0.0  
gb|APR64221.1| DNA-directed RNA polymerase family protein [Popul...   946   0.0  
ref|XP_024185624.1| DNA-directed RNA polymerase 3, chloroplastic...   942   0.0  
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...   941   0.0  
ref|XP_023905982.1| DNA-directed RNA polymerase 3, chloroplastic...   940   0.0  
ref|XP_021634642.1| DNA-directed RNA polymerase 3B, chloroplasti...   939   0.0  
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   939   0.0  
ref|XP_011018068.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   938   0.0  

>ref|XP_020251395.1| DNA-directed RNA polymerase 3B, chloroplastic-like [Asparagus
            officinalis]
          Length = 989

 Score =  999 bits (2582), Expect = 0.0
 Identities = 493/586 (84%), Positives = 528/586 (90%), Gaps = 20/586 (3%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLP 180
            P+DQSACSPPEIRPAF+HTFKTV K+  KLK++FGVIECD LVHQGL+STARHMVIPYLP
Sbjct: 364  PVDQSACSPPEIRPAFKHTFKTVAKDSRKLKNRFGVIECDRLVHQGLNSTARHMVIPYLP 423

Query: 181  MLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWR 360
            MLIPPKKWKGY++GGHL++PSYVMRTHGSKEQQ+AI+  PKKQLK+VFEALDTLGSTKWR
Sbjct: 424  MLIPPKKWKGYNEGGHLFLPSYVMRTHGSKEQQNAIRRVPKKQLKRVFEALDTLGSTKWR 483

Query: 361  VNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMH 540
            VNRRVL VLE MWSRGGNVAGLIDREDIP+PERP SEDLT IKEWRWNSRKAKK N+EMH
Sbjct: 484  VNRRVLVVLESMWSRGGNVAGLIDREDIPLPERPSSEDLTKIKEWRWNSRKAKKANSEMH 543

Query: 541  AQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRP 720
            AQRCDIELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRP
Sbjct: 544  AQRCDIELKLSVARKIKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRP 603

Query: 721  LGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDP 900
            LGKSGLRWLKIHLANIYG GVEKLSYDGRL FVENH+R+IFDSADNP++G+ WWI+AEDP
Sbjct: 604  LGKSGLRWLKIHLANIYGCGVEKLSYDGRLAFVENHLRDIFDSADNPLDGERWWIDAEDP 663

Query: 901  FQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEK 1080
            FQCLAAC+NLSDALRSP PHSVISHLPIHQDGSCNGLQHYAALGRD LEAAAVNLVAGEK
Sbjct: 664  FQCLAACINLSDALRSPWPHSVISHLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEK 723

Query: 1081 PADVYSGIAA--------------------RVLDFMIKDSQKDPATDPTALLAKVLIDQV 1200
            PADVYSGIAA                    RVLD M+KDSQKDPAT+PTALLAKVLIDQV
Sbjct: 724  PADVYSGIAASGRKQKKMLRNLRARRTELPRVLDIMMKDSQKDPATNPTALLAKVLIDQV 783

Query: 1201 DRKLVKQTVMTSVYGVTFVGAREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMF 1380
            DRKLVKQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR+LF ASCYA KVTLN+LGEMF
Sbjct: 784  DRKLVKQTVMTSVYGVTYVGAREQIKRRLTEKGKITDDRLLFHASCYATKVTLNALGEMF 843

Query: 1381 QAARGIMKWLGDCAKVIASENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGH 1560
            QAARGIMKWLGDCAKVIASENEPVRWTTPLGLPVVQPYR SERHLIRTSLQVLALQR+G 
Sbjct: 844  QAARGIMKWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKSERHLIRTSLQVLALQRDGD 903

Query: 1561 SVAVKHQKTAFPPNFVHSLDGSHMMMTAIACRKAGLQFAGVHDSFW 1698
            +VAVK QKTAFPPNFVHSLD     ++ I C      +  VHDSFW
Sbjct: 904  AVAVKQQKTAFPPNFVHSLD-----VSVIICIIYHANYR-VHDSFW 943


>ref|XP_020109600.1| DNA-directed RNA polymerase 3B, chloroplastic-like [Ananas comosus]
          Length = 976

 Score =  991 bits (2561), Expect = 0.0
 Identities = 471/566 (83%), Positives = 522/566 (92%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLP 180
            P  QSA S  EIRPAFRH FKTV  E+GKL++++GVIECD LVH+GLDSTARHMVIPYLP
Sbjct: 347  PPSQSADSLLEIRPAFRHAFKTVAVENGKLRNRYGVIECDPLVHKGLDSTARHMVIPYLP 406

Query: 181  MLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWR 360
            MLIPPK WKGYDKGGHL++PSYVMRTHG+K+QQDAIKS P KQL++VFEALDTLGSTKWR
Sbjct: 407  MLIPPKNWKGYDKGGHLFLPSYVMRTHGAKDQQDAIKSVPPKQLRRVFEALDTLGSTKWR 466

Query: 361  VNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMH 540
            VNRR+LDV+E +WS GG +AGLI+R+DIP+ ERP+SED   I+ W+W+ RKAKK NNEMH
Sbjct: 467  VNRRILDVVESIWSGGGGIAGLINRQDIPLAERPDSEDPVEIQRWKWSIRKAKKANNEMH 526

Query: 541  AQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRP 720
            AQRCD ELKLSVARKM+DEEGF+YPHNLDFRGRAYPMHSHLNHLSSD+CRGILEFAEGRP
Sbjct: 527  AQRCDTELKLSVARKMRDEEGFHYPHNLDFRGRAYPMHSHLNHLSSDLCRGILEFAEGRP 586

Query: 721  LGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDP 900
            LGKSGL WLKIHLANIYGGGVEKL Y+GRL FVE+H+ +IFDSA NP+ GKCWW+NAEDP
Sbjct: 587  LGKSGLHWLKIHLANIYGGGVEKLCYEGRLAFVEDHLHDIFDSAANPIEGKCWWVNAEDP 646

Query: 901  FQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEK 1080
            FQCLAACM+LSDAL+S SPH+ +SH+PIHQDGSCNGLQHYAALGRD+LEAAAVNLVAGEK
Sbjct: 647  FQCLAACMDLSDALKSSSPHNAVSHVPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEK 706

Query: 1081 PADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVG 1260
            PADVYSGIAARV+D M KDSQKDPAT+PTALLAK L+DQVDRKLVKQTVMTSVYGVT+VG
Sbjct: 707  PADVYSGIAARVMDTMQKDSQKDPATNPTALLAKALVDQVDRKLVKQTVMTSVYGVTYVG 766

Query: 1261 AREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIASE 1440
            AREQIKRRL E+G ITDDR+LFS+SCYAAKVTL++LGEMFQAAR IMKWL DCAKVIASE
Sbjct: 767  AREQIKRRLEEKGLITDDRLLFSSSCYAAKVTLDALGEMFQAARSIMKWLADCAKVIASE 826

Query: 1441 NEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLD 1620
            N+PVRWTTPLGLPVVQPYRN ERHLIRTSLQVLALQR G +V+VK QKTAFPPNFVHSLD
Sbjct: 827  NQPVRWTTPLGLPVVQPYRNYERHLIRTSLQVLALQRGGQTVSVKRQKTAFPPNFVHSLD 886

Query: 1621 GSHMMMTAIACRKAGLQFAGVHDSFW 1698
            GSHMMMTAIAC+ AGL FAGVHDSFW
Sbjct: 887  GSHMMMTAIACKNAGLHFAGVHDSFW 912


>ref|XP_009400360.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X2
            [Musa acuminata subsp. malaccensis]
          Length = 809

 Score =  983 bits (2542), Expect = 0.0
 Identities = 461/566 (81%), Positives = 520/566 (91%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLP 180
            P D  A  PPEI PAFRHTFK ++KE+GK  +++GVIECD LVH+G DSTARHMVIPYLP
Sbjct: 180  PCDSLADCPPEILPAFRHTFKNISKENGKSINRYGVIECDPLVHKGFDSTARHMVIPYLP 239

Query: 181  MLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWR 360
            MLIPPK WKGYD GGHL++PSYVMRTHG++EQQ AIKS P+KQL+KVFEALDTLG TKWR
Sbjct: 240  MLIPPKSWKGYDNGGHLFLPSYVMRTHGAQEQQKAIKSVPRKQLQKVFEALDTLGRTKWR 299

Query: 361  VNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMH 540
            +NRR+LDV+EI+WSRGG +AGL+DR+DI +P+RPE+EDLT IK+WRW++RKAKK N+EMH
Sbjct: 300  INRRILDVIEIVWSRGGGIAGLVDRKDIQLPDRPETEDLTEIKKWRWSTRKAKKANSEMH 359

Query: 541  AQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRP 720
            AQRCD+ELKLSVA KM+DEEGFYYPHN+DFRGRAYPMHSHLNHLSSD+CRGILEFAEG+P
Sbjct: 360  AQRCDVELKLSVAHKMRDEEGFYYPHNIDFRGRAYPMHSHLNHLSSDLCRGILEFAEGKP 419

Query: 721  LGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDP 900
            LGKSGL WLKIHLANIYGGGVEKLSYD RL FV+NH+R+IFDSA+NP++G  WWI+AEDP
Sbjct: 420  LGKSGLHWLKIHLANIYGGGVEKLSYDRRLTFVKNHLRDIFDSAENPIDGNRWWISAEDP 479

Query: 901  FQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEK 1080
            FQCLAAC++L+ AL+S SPH  ISHLPIHQDGSCNGLQHYAALGRD+LEAAAVNLVAGEK
Sbjct: 480  FQCLAACIDLTKALKSSSPHMAISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEK 539

Query: 1081 PADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVG 1260
            PADVYS IA RV + + KDS+KDP  DPTALLAKVL+DQVDRKLVKQTVMTSVYGVT+VG
Sbjct: 540  PADVYSEIAMRVREIIRKDSEKDPTVDPTALLAKVLVDQVDRKLVKQTVMTSVYGVTYVG 599

Query: 1261 AREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIASE 1440
            AREQIKRRL E+G ITDDR+LF ASCYAAKVTLN+LGEMF+AARGIMKWLGDCAK+IASE
Sbjct: 600  AREQIKRRLEEKGLITDDRLLFGASCYAAKVTLNALGEMFEAARGIMKWLGDCAKIIASE 659

Query: 1441 NEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLD 1620
            NEPV+WTTPLGLPVVQPYRNSERH IRTSLQVL LQREG SV+VK QKTAFPPN+VHSLD
Sbjct: 660  NEPVKWTTPLGLPVVQPYRNSERHQIRTSLQVLTLQREGQSVSVKRQKTAFPPNYVHSLD 719

Query: 1621 GSHMMMTAIACRKAGLQFAGVHDSFW 1698
            GSHMMMTAI+C+ AGL FAGVHDSFW
Sbjct: 720  GSHMMMTAISCKNAGLHFAGVHDSFW 745


>gb|OAY70002.1| DNA-directed RNA polymerase 3, chloroplastic [Ananas comosus]
          Length = 910

 Score =  982 bits (2539), Expect = 0.0
 Identities = 466/561 (83%), Positives = 520/561 (92%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLP 180
            P  QSA S PEIRPAFRH FKTV  E+GKL++++GVIECD LVH+GLDSTARHMVIPYLP
Sbjct: 347  PPSQSADSLPEIRPAFRHAFKTVAVENGKLRNRYGVIECDPLVHKGLDSTARHMVIPYLP 406

Query: 181  MLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWR 360
            MLIPPK WKGYDKGGHL++PSYVMRTHG+K+QQDAIKS P+KQL++VFEALDTLGSTKWR
Sbjct: 407  MLIPPKNWKGYDKGGHLFLPSYVMRTHGAKDQQDAIKSVPRKQLRRVFEALDTLGSTKWR 466

Query: 361  VNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMH 540
            VNRR+LDV+E +WS GG +AGLI+++DIP+ ERP+SED   I+ W+W+ RKAKK NNEMH
Sbjct: 467  VNRRILDVVESIWSGGGGIAGLINQQDIPLAERPDSEDPVEIQRWKWSIRKAKKANNEMH 526

Query: 541  AQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRP 720
            AQRCD ELKLSVARKM+DEEGF+YPHNLDFRGRAYPMHSHLNHLSSD+CRGILEFAEGRP
Sbjct: 527  AQRCDTELKLSVARKMRDEEGFHYPHNLDFRGRAYPMHSHLNHLSSDLCRGILEFAEGRP 586

Query: 721  LGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDP 900
            LGKSGL WLKIHLANIYGGGVEKL Y+GRL FVE+H+ +IFDSA NP+ GKCWW+NAEDP
Sbjct: 587  LGKSGLHWLKIHLANIYGGGVEKLCYEGRLAFVEDHLHDIFDSAANPIEGKCWWVNAEDP 646

Query: 901  FQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEK 1080
            FQCLAACM+LSDAL+S SPH+ +SH+PIHQDGSCNGLQHYAALGRD+LEAAAVNLVAGEK
Sbjct: 647  FQCLAACMDLSDALKSSSPHNAVSHVPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEK 706

Query: 1081 PADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVG 1260
            PADVYSGIAARV+D M KDSQKDPAT+PTALLAK L+DQVDRKLVKQTVMTSVYGVT+VG
Sbjct: 707  PADVYSGIAARVMDTMQKDSQKDPATNPTALLAKALVDQVDRKLVKQTVMTSVYGVTYVG 766

Query: 1261 AREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIASE 1440
            AREQIKRRL E+G ITDDR+LFS+SCYAAKVTL++LGEMFQAAR IMKWL DCAKVIASE
Sbjct: 767  AREQIKRRLEEKGLITDDRLLFSSSCYAAKVTLDALGEMFQAARSIMKWLADCAKVIASE 826

Query: 1441 NEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLD 1620
            N+PVRWTTPLGLPVVQPYRN ERHLIRTSLQVLALQREG +V+VK QKTAFPPNFVHSLD
Sbjct: 827  NQPVRWTTPLGLPVVQPYRNYERHLIRTSLQVLALQREGQTVSVKRQKTAFPPNFVHSLD 886

Query: 1621 GSHMMMTAIACRKAGLQFAGV 1683
            GSHMMMTAIAC+ AGL FAG+
Sbjct: 887  GSHMMMTAIACKNAGLHFAGL 907


>ref|XP_018683779.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X1
            [Musa acuminata subsp. malaccensis]
          Length = 810

 Score =  979 bits (2530), Expect = 0.0
 Identities = 461/567 (81%), Positives = 520/567 (91%), Gaps = 1/567 (0%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLP 180
            P D  A  PPEI PAFRHTFK ++KE+GK  +++GVIECD LVH+G DSTARHMVIPYLP
Sbjct: 180  PCDSLADCPPEILPAFRHTFKNISKENGKSINRYGVIECDPLVHKGFDSTARHMVIPYLP 239

Query: 181  MLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWR 360
            MLIPPK WKGYD GGHL++PSYVMRTHG++EQQ AIKS P+KQL+KVFEALDTLG TKWR
Sbjct: 240  MLIPPKSWKGYDNGGHLFLPSYVMRTHGAQEQQKAIKSVPRKQLQKVFEALDTLGRTKWR 299

Query: 361  VNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMH 540
            +NRR+LDV+EI+WSRGG +AGL+DR+DI +P+RPE+EDLT IK+WRW++RKAKK N+EMH
Sbjct: 300  INRRILDVIEIVWSRGGGIAGLVDRKDIQLPDRPETEDLTEIKKWRWSTRKAKKANSEMH 359

Query: 541  AQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRP 720
            AQRCD+ELKLSVA KM+DEEGFYYPHN+DFRGRAYPMHSHLNHLSSD+CRGILEFAEG+P
Sbjct: 360  AQRCDVELKLSVAHKMRDEEGFYYPHNIDFRGRAYPMHSHLNHLSSDLCRGILEFAEGKP 419

Query: 721  LGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDP 900
            LGKSGL WLKIHLANIYGGGVEKLSYD RL FV+NH+R+IFDSA+NP++G  WWI+AEDP
Sbjct: 420  LGKSGLHWLKIHLANIYGGGVEKLSYDRRLTFVKNHLRDIFDSAENPIDGNRWWISAEDP 479

Query: 901  FQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEK 1080
            FQCLAAC++L+ AL+S SPH  ISHLPIHQDGSCNGLQHYAALGRD+LEAAAVNLVAGEK
Sbjct: 480  FQCLAACIDLTKALKSSSPHMAISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEK 539

Query: 1081 PADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVG 1260
            PADVYS IA RV + + KDS+KDP  DPTALLAKVL+DQVDRKLVKQTVMTSVYGVT+VG
Sbjct: 540  PADVYSEIAMRVREIIRKDSEKDPTVDPTALLAKVLVDQVDRKLVKQTVMTSVYGVTYVG 599

Query: 1261 AREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIASE 1440
            AREQIKRRL E+G ITDDR+LF ASCYAAKVTLN+LGEMF+AARGIMKWLGDCAK+IASE
Sbjct: 600  AREQIKRRLEEKGLITDDRLLFGASCYAAKVTLNALGEMFEAARGIMKWLGDCAKIIASE 659

Query: 1441 NEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHS-VAVKHQKTAFPPNFVHSL 1617
            NEPV+WTTPLGLPVVQPYRNSERH IRTSLQVL LQREG S V+VK QKTAFPPN+VHSL
Sbjct: 660  NEPVKWTTPLGLPVVQPYRNSERHQIRTSLQVLTLQREGQSQVSVKRQKTAFPPNYVHSL 719

Query: 1618 DGSHMMMTAIACRKAGLQFAGVHDSFW 1698
            DGSHMMMTAI+C+ AGL FAGVHDSFW
Sbjct: 720  DGSHMMMTAISCKNAGLHFAGVHDSFW 746


>ref|XP_010904633.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X1
            [Elaeis guineensis]
          Length = 894

 Score =  978 bits (2527), Expect = 0.0
 Identities = 464/566 (81%), Positives = 515/566 (90%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLP 180
            P  Q   S P+IRPAFRH+FK V KEDGKL++K+GVIECD LV +GLDSTARH+VIPYLP
Sbjct: 265  PPKQLIDSLPDIRPAFRHSFKAVAKEDGKLRNKYGVIECDPLVQKGLDSTARHVVIPYLP 324

Query: 181  MLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWR 360
            MLIPPK WKGYDKGGHL++PSYVMRTHG+K+QQDAIKS P+KQL+KVF+ALD LGSTKWR
Sbjct: 325  MLIPPKNWKGYDKGGHLFLPSYVMRTHGAKDQQDAIKSVPRKQLQKVFKALDILGSTKWR 384

Query: 361  VNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMH 540
            VNR +LDV+E +WS+GG +AGL+DR DIP+PER +SED   I++WRW  RK KK NNEMH
Sbjct: 385  VNRPILDVVEGIWSKGGGIAGLVDRVDIPVPERSDSEDSVEIRKWRWRVRKVKKANNEMH 444

Query: 541  AQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRP 720
            AQRCD ELKLSVARKM+DEEGFYYPHNLDFRGRAYPMHSHLNHLSSD+CRGILEFAEGRP
Sbjct: 445  AQRCDTELKLSVARKMRDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGILEFAEGRP 504

Query: 721  LGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDP 900
            LGKSGLRWLKIHLAN+YGGGV KLSYDGRL FVENH+ +IFDSA NP+ G  WW+NAEDP
Sbjct: 505  LGKSGLRWLKIHLANLYGGGVGKLSYDGRLAFVENHLHDIFDSAANPIEGDRWWLNAEDP 564

Query: 901  FQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEK 1080
            FQCLAAC+NLSDAL+S SP   ISH+PIHQDGSCNGLQHYAALGRD+LEAAAVNLVAGEK
Sbjct: 565  FQCLAACINLSDALKSSSPTEAISHIPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEK 624

Query: 1081 PADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVG 1260
            P DVYSGIAARV+D M KDS +DP T+PTALLAK L+DQVDRKLVKQTVMTSVYGVTFVG
Sbjct: 625  PGDVYSGIAARVMDIMRKDSARDPTTNPTALLAKALVDQVDRKLVKQTVMTSVYGVTFVG 684

Query: 1261 AREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIASE 1440
            AREQIKRRL E+G ITDDR+LF+ASCYAAKVTL++LGEMFQAAR IMKWL DCAKVIASE
Sbjct: 685  AREQIKRRLEEKGLITDDRLLFTASCYAAKVTLDALGEMFQAARSIMKWLADCAKVIASE 744

Query: 1441 NEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLD 1620
            ++PVRWTTPLGLPVVQPY+N ERHLIRTSLQVLALQREGHSV+VK QK+AFPPNFVHSLD
Sbjct: 745  DQPVRWTTPLGLPVVQPYKNCERHLIRTSLQVLALQREGHSVSVKRQKSAFPPNFVHSLD 804

Query: 1621 GSHMMMTAIACRKAGLQFAGVHDSFW 1698
            GSHMMMTAI+C+ AGL FAGVHDSFW
Sbjct: 805  GSHMMMTAISCKNAGLHFAGVHDSFW 830


>ref|XP_020699293.1| DNA-directed RNA polymerase 3, chloroplastic-like isoform X1
            [Dendrobium catenatum]
          Length = 985

 Score =  974 bits (2519), Expect = 0.0
 Identities = 466/566 (82%), Positives = 517/566 (91%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLP 180
            P++QS  S P+I PAFRH  K V+ EDGKLK+K+GVIEC  LVH GL STAR MVIPYLP
Sbjct: 356  PINQSGDSSPDILPAFRHILKAVSVEDGKLKNKYGVIECHPLVHMGLGSTARLMVIPYLP 415

Query: 181  MLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWR 360
            MLIPPKKWKGY+KGGHL++PSYVMRTHG+K+QQ+AIKS PK+QL KVFEALDTLGSTKWR
Sbjct: 416  MLIPPKKWKGYNKGGHLFLPSYVMRTHGAKDQQNAIKSVPKRQLNKVFEALDTLGSTKWR 475

Query: 361  VNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMH 540
            VNRR+L+V+E +WS GG VAGL+DREDIPI E+P  ED   IK+WRWN+RKAKK NNEMH
Sbjct: 476  VNRRILEVVETIWSEGGGVAGLVDREDIPIQEKPGLEDSMEIKKWRWNARKAKKANNEMH 535

Query: 541  AQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRP 720
            AQRCD ELKLSVARKM+DEEGFYYPHNLDFRGRAYPMHSHLNHLSSD+CRGILEFAEGR 
Sbjct: 536  AQRCDTELKLSVARKMQDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGILEFAEGRQ 595

Query: 721  LGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDP 900
            LGKSGL WLK+HLANIYGGGVEKLSYD RL FVENH+ NIFDSA NPV+GK WWI+AEDP
Sbjct: 596  LGKSGLCWLKVHLANIYGGGVEKLSYDARLTFVENHLNNIFDSAMNPVDGKRWWIHAEDP 655

Query: 901  FQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEK 1080
            FQCLAAC+NLSDAL S SPHS+IS+LPIHQDGSCNGLQHYAALGRD+LEAAAVNLVA EK
Sbjct: 656  FQCLAACINLSDALTSSSPHSMISYLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAQEK 715

Query: 1081 PADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVG 1260
            PADVYSGIAARV + + +DSQKDPA+DPTA LAK+L+DQVDRKLVKQTVMTSVYGVT+VG
Sbjct: 716  PADVYSGIAARVYEIVKQDSQKDPASDPTASLAKILVDQVDRKLVKQTVMTSVYGVTYVG 775

Query: 1261 AREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIASE 1440
            AREQIKRRL+E+G+ITDDR+LF  SCYAAKVTLN+LGEMFQAAR IMKWLGDCAK+IASE
Sbjct: 776  AREQIKRRLIEKGKITDDRLLFRVSCYAAKVTLNALGEMFQAARSIMKWLGDCAKIIASE 835

Query: 1441 NEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLD 1620
            N+PV WTTPLGLPVVQPYRNSERHLIRTSLQVLAL+R+G  VA K QKTAFPPNFVHSLD
Sbjct: 836  NQPVTWTTPLGLPVVQPYRNSERHLIRTSLQVLALKRDGCLVAAKQQKTAFPPNFVHSLD 895

Query: 1621 GSHMMMTAIACRKAGLQFAGVHDSFW 1698
            GSHMMMTAI+C+ +GL+FAGVHDSFW
Sbjct: 896  GSHMMMTAISCKNSGLKFAGVHDSFW 921


>gb|ONK78853.1| uncharacterized protein A4U43_C01F240 [Asparagus officinalis]
          Length = 775

 Score =  971 bits (2510), Expect = 0.0
 Identities = 469/524 (89%), Positives = 501/524 (95%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLP 180
            P+DQSACSPPEIRPAF+HTFKTV K+  KLK++FGVIECD LVHQGL+STARHMVIPYLP
Sbjct: 183  PVDQSACSPPEIRPAFKHTFKTVAKDSRKLKNRFGVIECDRLVHQGLNSTARHMVIPYLP 242

Query: 181  MLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWR 360
            MLIPPKKWKGY++GGHL++PSYVMRTHGSKEQQ+AI+  PKKQLK+VFEALDTLGSTKWR
Sbjct: 243  MLIPPKKWKGYNEGGHLFLPSYVMRTHGSKEQQNAIRRVPKKQLKRVFEALDTLGSTKWR 302

Query: 361  VNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMH 540
            VNRRVL VLE MWSRGGNVAGLIDREDIP+PERP SEDLT IKEWRWNSRKAKK N+EMH
Sbjct: 303  VNRRVLVVLESMWSRGGNVAGLIDREDIPLPERPSSEDLTKIKEWRWNSRKAKKANSEMH 362

Query: 541  AQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRP 720
            AQRCDIELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRP
Sbjct: 363  AQRCDIELKLSVARKIKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRP 422

Query: 721  LGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDP 900
            LGKSGLRWLKIHLANIYG GVEKLSYDGRL FVENH+R+IFDSADNP++G+ WWI+AEDP
Sbjct: 423  LGKSGLRWLKIHLANIYGCGVEKLSYDGRLAFVENHLRDIFDSADNPLDGERWWIDAEDP 482

Query: 901  FQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEK 1080
            FQCLAAC+NLSDALRSP PHSVISHLPIHQDGSCNGLQHYAALGRD LEAAAVNLVAGEK
Sbjct: 483  FQCLAACINLSDALRSPWPHSVISHLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEK 542

Query: 1081 PADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVG 1260
            PADVYSGIAARVLD M+KDSQKDPAT+PTALLAKVLIDQVDRKLVKQTVMTSVYGVT+VG
Sbjct: 543  PADVYSGIAARVLDIMMKDSQKDPATNPTALLAKVLIDQVDRKLVKQTVMTSVYGVTYVG 602

Query: 1261 AREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIASE 1440
            AREQIKRRL E+G+ITDDR+LF ASCYA KVTLN+LGEMFQAARGIMKWLGDCAKVIASE
Sbjct: 603  AREQIKRRLTEKGKITDDRLLFHASCYATKVTLNALGEMFQAARGIMKWLGDCAKVIASE 662

Query: 1441 NEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAV 1572
            NEPVRWTTPLGLPVVQPYR SERHLIRTSLQVLALQR+G +V V
Sbjct: 663  NEPVRWTTPLGLPVVQPYRKSERHLIRTSLQVLALQRDGDAVRV 706


>ref|XP_020597755.1| DNA-directed RNA polymerase 3, chloroplastic-like [Phalaenopsis
            equestris]
          Length = 985

 Score =  970 bits (2508), Expect = 0.0
 Identities = 459/566 (81%), Positives = 513/566 (90%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLP 180
            P+DQ     P+I PAF H  KTV+ EDGKLK+K+GV+EC  LVH GL STAR MVIPY+P
Sbjct: 356  PIDQFGDHSPDILPAFMHKLKTVSVEDGKLKNKYGVVECHALVHMGLGSTARLMVIPYMP 415

Query: 181  MLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWR 360
            MLIPPKKWKGY+KGGHL++PSYVMRTHG+KEQQ+AIKS PK+QL KVFEALDTLGSTKWR
Sbjct: 416  MLIPPKKWKGYNKGGHLFLPSYVMRTHGAKEQQNAIKSVPKRQLNKVFEALDTLGSTKWR 475

Query: 361  VNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMH 540
            VNRR+L+++E +W++GG +AGL+ RED+PIPE+P  ED   IK+WRWN+RKA+K NNEMH
Sbjct: 476  VNRRILEIVESIWNQGGGIAGLVGREDVPIPEKPGLEDSMEIKKWRWNARKARKANNEMH 535

Query: 541  AQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRP 720
            AQRCD ELKLSVARKM+DEEGFYYPHNLDFRGRAYPMHSHLNHLSSD+CRGILEFAEGRP
Sbjct: 536  AQRCDTELKLSVARKMRDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGILEFAEGRP 595

Query: 721  LGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDP 900
            LGKSGL WLKIHLANI+GGGVEKLSYD RL FVENH+ NIFDSA NPV+GK WWINAEDP
Sbjct: 596  LGKSGLYWLKIHLANIFGGGVEKLSYDARLTFVENHLHNIFDSAMNPVDGKRWWINAEDP 655

Query: 901  FQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEK 1080
            FQCLAAC+NLSDAL S SPHSVIS+LPIHQDGSCNGLQHYAALGRD LEA AVNLVA E+
Sbjct: 656  FQCLAACINLSDALTSSSPHSVISYLPIHQDGSCNGLQHYAALGRDCLEATAVNLVAQER 715

Query: 1081 PADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVG 1260
            PADVYSGIAARV + + +DSQKDP  DPTALLAK+L+DQVDRKLVKQTVMTSVYGVT+VG
Sbjct: 716  PADVYSGIAARVYEIVKEDSQKDPTNDPTALLAKILLDQVDRKLVKQTVMTSVYGVTYVG 775

Query: 1261 AREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIASE 1440
            AREQIKRRL+E+G+ITD+R+LF  SCYAAKVTLN+LGEMFQAAR IMKWLGDCAK+IASE
Sbjct: 776  AREQIKRRLIEKGKITDERLLFRVSCYAAKVTLNALGEMFQAARSIMKWLGDCAKIIASE 835

Query: 1441 NEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLD 1620
            N+PVRWTTPLGLPV+QPYRN ERHLIRTSLQVLAL+R+G  VA K QKTAFPPNFVHSLD
Sbjct: 836  NQPVRWTTPLGLPVIQPYRNFERHLIRTSLQVLALKRDGCLVAAKQQKTAFPPNFVHSLD 895

Query: 1621 GSHMMMTAIACRKAGLQFAGVHDSFW 1698
            GSHMMMTAI+CR +GL FAGVHDSFW
Sbjct: 896  GSHMMMTAISCRNSGLNFAGVHDSFW 921


>gb|OVA10304.1| DNA-directed RNA polymerase [Macleaya cordata]
          Length = 1019

 Score =  954 bits (2465), Expect = 0.0
 Identities = 453/567 (79%), Positives = 511/567 (90%), Gaps = 1/567 (0%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDGKLKSK-FGVIECDTLVHQGLDSTARHMVIPYL 177
            P++Q A SPP+IRPAFRHT KT+ KE G+   K +GVIECD LVH+GLD TARHM   Y+
Sbjct: 341  PVNQLADSPPDIRPAFRHTLKTIRKETGQSGGKRYGVIECDPLVHKGLDGTARHMEFSYM 400

Query: 178  PMLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKW 357
            PMLIPPKKWKGY+ GGHL++PSYVMRTHG+K+Q+DA+KS P++Q+++VFEALDTLG TKW
Sbjct: 401  PMLIPPKKWKGYETGGHLFLPSYVMRTHGAKQQKDAVKSVPRRQMQRVFEALDTLGRTKW 460

Query: 358  RVNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEM 537
            RVN+RVLDV+E +W+RGGNVAGL+DRED+ IPE+P S+D T I++W+W+ RKAKK N E 
Sbjct: 461  RVNKRVLDVIESVWARGGNVAGLVDREDVLIPEKPHSDDATEIQKWKWSVRKAKKCNRER 520

Query: 538  HAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGR 717
            HAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSD+CRG+LEFAEGR
Sbjct: 521  HAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFAEGR 580

Query: 718  PLGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAED 897
            PLGKSGLRWLKIHLAN+Y GGVEKLSY+ R+ FVENH+ +I DSA  P++GK WW+NAED
Sbjct: 581  PLGKSGLRWLKIHLANLYAGGVEKLSYEERVTFVENHLDDILDSAQRPIDGKRWWLNAED 640

Query: 898  PFQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE 1077
            PFQCLAAC+NLSDAL+S SP++ ISHLPIHQDGSCNGLQHYAALGRD+LEAAAVNLVAGE
Sbjct: 641  PFQCLAACINLSDALKSSSPYTAISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGE 700

Query: 1078 KPADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFV 1257
            KPADVYS IAARVL+ M +D  KDPAT P ALLAK+LI QVDRKLVKQTVMTSVYGVT+V
Sbjct: 701  KPADVYSEIAARVLNIMKRDCSKDPATHPAALLAKILIGQVDRKLVKQTVMTSVYGVTYV 760

Query: 1258 GAREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIAS 1437
            GAREQIKRRL+ERG ITDDR+LFSASCYAAKVT+ +LGEMFQAAR IM WL DCAKVIAS
Sbjct: 761  GAREQIKRRLMERGSITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLSDCAKVIAS 820

Query: 1438 ENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSL 1617
            EN+PVRWTTPLGLPVVQPYR  ERHLIRTSLQVLALQREG SV VK QK+AFPPNFVHSL
Sbjct: 821  ENQPVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSL 880

Query: 1618 DGSHMMMTAIACRKAGLQFAGVHDSFW 1698
            DGSHMMMTA+ACR AGL FAGVHDSFW
Sbjct: 881  DGSHMMMTAVACRDAGLHFAGVHDSFW 907


>emb|CBI36559.3| unnamed protein product, partial [Vitis vinifera]
          Length = 808

 Score =  949 bits (2452), Expect = 0.0
 Identities = 447/567 (78%), Positives = 515/567 (90%), Gaps = 1/567 (0%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDGKLK-SKFGVIECDTLVHQGLDSTARHMVIPYL 177
            P++QSA  PP++RPAFRHTFKTVTKE G+    K+GVIECD LV  GLD TA+HMVIPY+
Sbjct: 178  PVNQSADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYV 237

Query: 178  PMLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKW 357
            PMLIPPKKWKGYDKGG+L++PSYVMRTHGS++QQDA+KS P++QL+KVFEALDTLG+TKW
Sbjct: 238  PMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKW 297

Query: 358  RVNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEM 537
            R+NRRVL V+E +W+RGGN+ GL+DRE++P+PE+P +EDLT I+ W+WN+RKAKK N E 
Sbjct: 298  RINRRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQER 357

Query: 538  HAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGR 717
            H+ RCD E+KLSVARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGR
Sbjct: 358  HSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGR 417

Query: 718  PLGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAED 897
            PLGKSGLRWLKI LAN+Y GGVEKLSYDGRL FV+NH+ ++FDSADNP+NG  WW+ AED
Sbjct: 418  PLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAED 477

Query: 898  PFQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE 1077
            PFQCLAAC+NLS+ALRS SPH+VISHLPIHQDGSCNGLQHYAALGR++LEA+AVNLVAGE
Sbjct: 478  PFQCLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGE 537

Query: 1078 KPADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFV 1257
            KPADVYS IAARV + M +DS KDPATDP ALLAKVLI QVDRKLVKQTVMTSVYGVT++
Sbjct: 538  KPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYI 597

Query: 1258 GAREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIAS 1437
            GAREQIKRRL E+G ITD+R+LF+A+CYAAKVTL +LGE+FQAAR IM WLG+CAKVIAS
Sbjct: 598  GAREQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIAS 657

Query: 1438 ENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSL 1617
            EN+PV+WTTPLGLPV+QPY  SERHLIRTSLQVLALQREG  V ++ Q+TAFPPNFVHSL
Sbjct: 658  ENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSL 717

Query: 1618 DGSHMMMTAIACRKAGLQFAGVHDSFW 1698
            DGSHMMMTA+ACR AGL FAGVHDSFW
Sbjct: 718  DGSHMMMTAVACRDAGLCFAGVHDSFW 744


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score =  949 bits (2452), Expect = 0.0
 Identities = 447/567 (78%), Positives = 515/567 (90%), Gaps = 1/567 (0%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDGKLK-SKFGVIECDTLVHQGLDSTARHMVIPYL 177
            P++QSA  PP++RPAFRHTFKTVTKE G+    K+GVIECD LV  GLD TA+HMVIPY+
Sbjct: 349  PVNQSADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYV 408

Query: 178  PMLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKW 357
            PMLIPPKKWKGYDKGG+L++PSYVMRTHGS++QQDA+KS P++QL+KVFEALDTLG+TKW
Sbjct: 409  PMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKW 468

Query: 358  RVNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEM 537
            R+NRRVL V+E +W+RGGN+ GL+DRE++P+PE+P +EDLT I+ W+WN+RKAKK N E 
Sbjct: 469  RINRRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQER 528

Query: 538  HAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGR 717
            H+ RCD E+KLSVARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGR
Sbjct: 529  HSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGR 588

Query: 718  PLGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAED 897
            PLGKSGLRWLKI LAN+Y GGVEKLSYDGRL FV+NH+ ++FDSADNP+NG  WW+ AED
Sbjct: 589  PLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAED 648

Query: 898  PFQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE 1077
            PFQCLAAC+NLS+ALRS SPH+VISHLPIHQDGSCNGLQHYAALGR++LEA+AVNLVAGE
Sbjct: 649  PFQCLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGE 708

Query: 1078 KPADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFV 1257
            KPADVYS IAARV + M +DS KDPATDP ALLAKVLI QVDRKLVKQTVMTSVYGVT++
Sbjct: 709  KPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYI 768

Query: 1258 GAREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIAS 1437
            GAREQIKRRL E+G ITD+R+LF+A+CYAAKVTL +LGE+FQAAR IM WLG+CAKVIAS
Sbjct: 769  GAREQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIAS 828

Query: 1438 ENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSL 1617
            EN+PV+WTTPLGLPV+QPY  SERHLIRTSLQVLALQREG  V ++ Q+TAFPPNFVHSL
Sbjct: 829  ENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSL 888

Query: 1618 DGSHMMMTAIACRKAGLQFAGVHDSFW 1698
            DGSHMMMTA+ACR AGL FAGVHDSFW
Sbjct: 889  DGSHMMMTAVACRDAGLCFAGVHDSFW 915


>ref|XP_010273705.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1
            [Nelumbo nucifera]
          Length = 956

 Score =  947 bits (2447), Expect = 0.0
 Identities = 452/567 (79%), Positives = 508/567 (89%), Gaps = 1/567 (0%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDGKLKSK-FGVIECDTLVHQGLDSTARHMVIPYL 177
            P++Q   SP EIRPAFRHTF+T++KE G+   K +GVIECD LV +GLD TARHMVIPY+
Sbjct: 326  PINQLGDSPREIRPAFRHTFRTLSKETGRRVGKRYGVIECDPLVGRGLDRTARHMVIPYV 385

Query: 178  PMLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKW 357
            PMLIPPKKWKGYDKGGHL++PSYVMRTHG+K QQDAIK+ P KQ++KVFEALDTLG TKW
Sbjct: 386  PMLIPPKKWKGYDKGGHLFLPSYVMRTHGAKRQQDAIKNVPGKQMQKVFEALDTLGRTKW 445

Query: 358  RVNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEM 537
            RVNR+VL V+E +W+RGGN+AGL+DREDIPIPE+P+SEDL  +++W+WN RK KK N E 
Sbjct: 446  RVNRKVLGVVESIWARGGNMAGLVDREDIPIPEKPDSEDLIEMQKWKWNMRKTKKINRER 505

Query: 538  HAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGR 717
            HAQRCDIELKLSVARK+KDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGR
Sbjct: 506  HAQRCDIELKLSVARKIKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGR 565

Query: 718  PLGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAED 897
            PLGK+GLRWLKIHLAN+Y GGV+KLSYD RL+FVENH+ +IFDSAD P++G  WW+NAED
Sbjct: 566  PLGKAGLRWLKIHLANLYAGGVDKLSYDDRLDFVENHLDDIFDSADKPIDGNRWWLNAED 625

Query: 898  PFQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE 1077
            PFQCLAAC+NLS+AL+S SPH+ ISHLPIHQDGSCNGLQHYAALGR  LEAAAVNLVAGE
Sbjct: 626  PFQCLAACINLSEALKSSSPHTAISHLPIHQDGSCNGLQHYAALGRYQLEAAAVNLVAGE 685

Query: 1078 KPADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFV 1257
            KPADVYS IAARV   M  D++KDP TDPTALLAKVLIDQVDRKLVKQTVMTSVYGVT+V
Sbjct: 686  KPADVYSEIAARVHSIMKMDAEKDPTTDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTYV 745

Query: 1258 GAREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIAS 1437
            GAREQIKRRL E+G IT+DR+LFSA+CYAAKVTL +L EMFQAAR IM WL DCAKVIAS
Sbjct: 746  GAREQIKRRLEEKGHITNDRLLFSAACYAAKVTLTALEEMFQAARSIMGWLSDCAKVIAS 805

Query: 1438 ENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSL 1617
            EN+PVRWTTPLGLPVVQPY   +RHL+RTSLQVLALQREG  V VK Q+TAFPPNFVHSL
Sbjct: 806  ENQPVRWTTPLGLPVVQPYLKPQRHLVRTSLQVLALQREGDLVEVKRQRTAFPPNFVHSL 865

Query: 1618 DGSHMMMTAIACRKAGLQFAGVHDSFW 1698
            DGSHMMMTA+ACR AGL FAGVHDSFW
Sbjct: 866  DGSHMMMTAVACRDAGLHFAGVHDSFW 892


>gb|APR64221.1| DNA-directed RNA polymerase family protein [Populus tomentosa]
          Length = 983

 Score =  946 bits (2446), Expect = 0.0
 Identities = 443/567 (78%), Positives = 510/567 (89%), Gaps = 1/567 (0%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYL 177
            P++QS   PP++RPAFRH FKT+TK  G K+  K+GVIECD L+  GLD TA+HM+IPY 
Sbjct: 353  PVNQSEDIPPDVRPAFRHRFKTLTKNPGQKIVKKYGVIECDPLILTGLDGTAKHMLIPYF 412

Query: 178  PMLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKW 357
            PML+PPKKWKGYDKGGHL++PSY+MRTHGS++QQ A++S P KQ++KVFEALDTLG+TKW
Sbjct: 413  PMLVPPKKWKGYDKGGHLFLPSYIMRTHGSRQQQVAVRSVPGKQMQKVFEALDTLGNTKW 472

Query: 358  RVNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEM 537
            RVNRR+LDV+E +W+ GGN+AGL+DREDIPIPE+P S+DLT I++W+W+ RKAKK N E 
Sbjct: 473  RVNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQER 532

Query: 538  HAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGR 717
            H+QRCDIELKLSVARK+KDEEGFYYPHNLDFRGRAYPMH HL HLSSD+CRG+LEF EGR
Sbjct: 533  HSQRCDIELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGR 592

Query: 718  PLGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAED 897
            PLGKSGLRWLKIHLAN+Y GGVEKLS+DGRL FVENH+  IFDSA NPVNGKCWW+ AED
Sbjct: 593  PLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPVNGKCWWLKAED 652

Query: 898  PFQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE 1077
            PFQCLAAC+NLS+AL S SPH+VISHLPIHQDGSCNGLQHYAALGRD+LEAAAVNLVA E
Sbjct: 653  PFQCLAACINLSEALSSASPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAAE 712

Query: 1078 KPADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFV 1257
            KP+DVYS IA RV + + +DS KDPAT+P ALLAK+L+DQVDRKLVKQTVMTSVYGVT+V
Sbjct: 713  KPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQTVMTSVYGVTYV 772

Query: 1258 GAREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIAS 1437
            GAREQIKRRL E+G ITDDR+LFSA+CY AKVTL +LGE+FQAAR IM WLGDCAK+IAS
Sbjct: 773  GAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARAIMSWLGDCAKIIAS 832

Query: 1438 ENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSL 1617
            E++PV+WTTPLGLPVVQPY  SERHLI+TSLQ+LALQREG SV V+ Q+TAFPPNFVHSL
Sbjct: 833  EDQPVQWTTPLGLPVVQPYYKSERHLIKTSLQILALQREGSSVQVRKQRTAFPPNFVHSL 892

Query: 1618 DGSHMMMTAIACRKAGLQFAGVHDSFW 1698
            DGSHMMMTA+ACR AGL FAGVHDSFW
Sbjct: 893  DGSHMMMTAVACRDAGLCFAGVHDSFW 919


>ref|XP_024185624.1| DNA-directed RNA polymerase 3, chloroplastic [Rosa chinensis]
 gb|PRQ46078.1| putative DNA-directed RNA polymerase [Rosa chinensis]
          Length = 984

 Score =  942 bits (2436), Expect = 0.0
 Identities = 443/567 (78%), Positives = 506/567 (89%), Gaps = 1/567 (0%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYL 177
            PLDQ A  PP++RPAFRH  K   K  G KL   +GVIECD LV  GLD TA+HM+IPY+
Sbjct: 354  PLDQLADGPPDVRPAFRHRLKAAAKSPGQKLVKNYGVIECDPLVLTGLDKTAKHMLIPYV 413

Query: 178  PMLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKW 357
            PML+PPK+WKGYDKGGHL++PSYVMRTHGS++Q D +++ P +Q++KVFEALD LGSTKW
Sbjct: 414  PMLVPPKRWKGYDKGGHLFLPSYVMRTHGSRKQVDTMRNIPGRQMQKVFEALDMLGSTKW 473

Query: 358  RVNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEM 537
            R+N++VL+V+E +W+RGGN+AGL+DRED+P+PE+P SEDLT I+EWRW++RKAKK N E 
Sbjct: 474  RINKKVLNVVESIWARGGNIAGLVDREDVPVPEKPPSEDLTEIQEWRWSARKAKKLNQER 533

Query: 538  HAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGR 717
            H+QRCD ELKLSVAR+MKDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGR
Sbjct: 534  HSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGR 593

Query: 718  PLGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAED 897
            PLGKSGLRWLKIHLAN+Y GGVEKLSYDGR+ FV+NHI +IFDSA NPVNG  WW+ AED
Sbjct: 594  PLGKSGLRWLKIHLANLYSGGVEKLSYDGRIAFVDNHIDDIFDSATNPVNGNHWWLTAED 653

Query: 898  PFQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE 1077
            P QCLAAC+NLS+AL SPSPH+VISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE
Sbjct: 654  PLQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE 713

Query: 1078 KPADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFV 1257
            KPADVYS IA RV D M +DS KDP T P ALLA+VL+DQ+DRKLVKQTVMTSVYGVT+V
Sbjct: 714  KPADVYSEIAVRVHDIMKRDSNKDPTTSPNALLARVLVDQIDRKLVKQTVMTSVYGVTYV 773

Query: 1258 GAREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIAS 1437
            GAREQIKRRL E+G ITDDR+LF+A+CYAAKVTL +LGE+FQAARGIM WLGDCAKVIAS
Sbjct: 774  GAREQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIAS 833

Query: 1438 ENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSL 1617
            EN+PVRWTTPLGLPVVQPY  SERHLIRTSLQVLALQRE + V V+ Q+TAFPPNFVHSL
Sbjct: 834  ENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNLVDVRKQRTAFPPNFVHSL 893

Query: 1618 DGSHMMMTAIACRKAGLQFAGVHDSFW 1698
            DGSHMMMTA+ACR A ++FAGVHDSFW
Sbjct: 894  DGSHMMMTALACRDASIRFAGVHDSFW 920


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
          Length = 882

 Score =  941 bits (2431), Expect = 0.0
 Identities = 442/567 (77%), Positives = 508/567 (89%), Gaps = 1/567 (0%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYL 177
            P++QS   PP++RPAFRH FKT+TK  G K+  K+GVIECD L+  GLD TA+HM+IPY 
Sbjct: 252  PVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLDGTAKHMLIPYF 311

Query: 178  PMLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKW 357
            PML+PPKKWKGYDKGGHL++PSYVMRTHGS++QQ A++S P KQ++KVFEALDTLG+TKW
Sbjct: 312  PMLVPPKKWKGYDKGGHLFLPSYVMRTHGSRQQQVAVRSVPGKQMQKVFEALDTLGNTKW 371

Query: 358  RVNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEM 537
            RVNRR+LDV+E +W+ GGN+AGL+DREDIPIPE+P S+DLT I++W+W+ RKAKK N E 
Sbjct: 372  RVNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQER 431

Query: 538  HAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGR 717
            H+QRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMH HL HLSSD+CRG+LEF EGR
Sbjct: 432  HSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGR 491

Query: 718  PLGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAED 897
            PLGKSGLRWLKIHLAN+Y GGVEKLS+DGRL FVENH+  IFDSA NPVNGK WW+ AED
Sbjct: 492  PLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPVNGKRWWLKAED 551

Query: 898  PFQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE 1077
            PFQCLAAC+NLS+AL S SPH+VISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVA E
Sbjct: 552  PFQCLAACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAAE 611

Query: 1078 KPADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFV 1257
            KP+DVYS IA RV + + +DS KDPAT+P ALLAK+L+DQVDRKLVKQTVMTSVYGVT+V
Sbjct: 612  KPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQTVMTSVYGVTYV 671

Query: 1258 GAREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIAS 1437
            GAREQIKRRL E+G ITDDR+LFSA+CY AKVTL +LGE+FQAAR IM WLGDCAK+IAS
Sbjct: 672  GAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMSWLGDCAKIIAS 731

Query: 1438 ENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSL 1617
            E++PV+WTTPLGLPVVQPY  +ERHLI+TSLQ+LALQREG SV V+ Q+TAFPPNFVHSL
Sbjct: 732  EDQPVQWTTPLGLPVVQPYYKTERHLIKTSLQILALQREGSSVQVRKQRTAFPPNFVHSL 791

Query: 1618 DGSHMMMTAIACRKAGLQFAGVHDSFW 1698
            DGSHMMMTA+ACR AGL FAGVHDSFW
Sbjct: 792  DGSHMMMTAVACRDAGLCFAGVHDSFW 818


>ref|XP_023905982.1| DNA-directed RNA polymerase 3, chloroplastic [Quercus suber]
          Length = 982

 Score =  940 bits (2429), Expect = 0.0
 Identities = 446/567 (78%), Positives = 508/567 (89%), Gaps = 1/567 (0%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYL 177
            PL+QSA  PP+IRPAFRH FK VTK  G K+   +G+IECD L+  GLD TA+H +IPY+
Sbjct: 352  PLNQSADGPPDIRPAFRHKFKPVTKNSGRKIVKNYGIIECDPLILMGLDKTAKHALIPYV 411

Query: 178  PMLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKW 357
            PML+PPKKWKGYDKGGHL++PSYVMRTHGS++QQDA+K+ P +Q++KVFEALD LG+TKW
Sbjct: 412  PMLVPPKKWKGYDKGGHLFLPSYVMRTHGSRKQQDAVKNVPVRQMQKVFEALDMLGNTKW 471

Query: 358  RVNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEM 537
            RVNRRV  V+E +W+RGGN+AGL+D ED+PIPE+P SEDLT I+EW+W+ RKAKK N E 
Sbjct: 472  RVNRRVFSVVESIWARGGNIAGLVDCEDVPIPEKPSSEDLTEIQEWKWSWRKAKKINLER 531

Query: 538  HAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGR 717
            H+QRCDIELKLSVAR M DEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRGILEFAEGR
Sbjct: 532  HSQRCDIELKLSVARTMIDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR 591

Query: 718  PLGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAED 897
            PLGKSGL WLKIHLAN+Y GGVEKLS+DGRL FV+NH+ +IFDSADNPVNG  WW+ AED
Sbjct: 592  PLGKSGLHWLKIHLANLYSGGVEKLSHDGRLAFVDNHLDDIFDSADNPVNGNQWWLTAED 651

Query: 898  PFQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE 1077
            PFQ LAAC+NLS+ALRS SPH+VISHLPIHQDGSCNGLQHYAALGRD++EAAAVNL AG+
Sbjct: 652  PFQFLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLTAGD 711

Query: 1078 KPADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFV 1257
            KPADVYS IA RV D M +DS KDPAT+P ALLAKVLIDQVDRKLVKQTVMTSVYGVT+V
Sbjct: 712  KPADVYSEIAVRVHDIMKRDSNKDPATNPHALLAKVLIDQVDRKLVKQTVMTSVYGVTYV 771

Query: 1258 GAREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIAS 1437
            GAREQIKRRL E+G ITDDR+LF+A+CY AKVTL +LGE+F+AARGIM WLGDCAKVIAS
Sbjct: 772  GAREQIKRRLEEKGLITDDRLLFTAACYGAKVTLAALGEIFEAARGIMGWLGDCAKVIAS 831

Query: 1438 ENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSL 1617
            EN+PVRWTTPLGLPVVQPY  SERHLIRTSLQ+LALQREG+ V V+ Q+TAFPPNFVHSL
Sbjct: 832  ENQPVRWTTPLGLPVVQPYCRSERHLIRTSLQILALQREGNMVDVRKQRTAFPPNFVHSL 891

Query: 1618 DGSHMMMTAIACRKAGLQFAGVHDSFW 1698
            DG+HMMMTA+ACR AGL+FAGVHDSFW
Sbjct: 892  DGTHMMMTAVACRDAGLRFAGVHDSFW 918


>ref|XP_021634642.1| DNA-directed RNA polymerase 3B, chloroplastic isoform X2 [Manihot
            esculenta]
 gb|OAY31446.1| hypothetical protein MANES_14G112700 [Manihot esculenta]
          Length = 992

 Score =  939 bits (2428), Expect = 0.0
 Identities = 439/567 (77%), Positives = 510/567 (89%), Gaps = 1/567 (0%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYL 177
            P++QSA SPP++RPAFRH FKT+T   G K+  K+GVIECD L+  GLD +  HM+IPY 
Sbjct: 362  PVNQSADSPPDVRPAFRHRFKTITNNPGQKIGKKYGVIECDPLILSGLDGSVNHMLIPYF 421

Query: 178  PMLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKW 357
            PML+PPKKWKGYDKGGH ++PSY+MRTHGS++QQDA++  P K ++KV+EALDTLG+TKW
Sbjct: 422  PMLVPPKKWKGYDKGGHFFLPSYIMRTHGSRKQQDALRRVPAKNMQKVYEALDTLGNTKW 481

Query: 358  RVNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEM 537
            RVNRRVL+V+E +W+RGGNVAGL+DR DIP+PE+P SEDLT I++WRW+ RKAKK N E 
Sbjct: 482  RVNRRVLNVVESIWARGGNVAGLVDRADIPVPEKPLSEDLTEIQQWRWSMRKAKKINRER 541

Query: 538  HAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGR 717
            H+QRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMH HL HLSSD+CRGILEFAEGR
Sbjct: 542  HSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGILEFAEGR 601

Query: 718  PLGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAED 897
            PLGKSGL WLKIHLAN+Y GGVEKLS++GRL FVENH+ +IFDSA+NPV+G+CWW+ AED
Sbjct: 602  PLGKSGLHWLKIHLANLYSGGVEKLSHEGRLAFVENHLDDIFDSAENPVHGQCWWLTAED 661

Query: 898  PFQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE 1077
            PFQCLAAC+NLS+AL+S SPH+VISHLPIHQDGSCNGLQHYAALGR++LEAAAVNLVAGE
Sbjct: 662  PFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEAAAVNLVAGE 721

Query: 1078 KPADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFV 1257
            KPADVY+ IA RV + + +DS KDPAT+P A+LAK+LIDQVDRKLVKQTVMTSVYGVT+V
Sbjct: 722  KPADVYTEIALRVHELIKRDSSKDPATNPNAILAKLLIDQVDRKLVKQTVMTSVYGVTYV 781

Query: 1258 GAREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIAS 1437
            GAREQIKRRL E+G ITDDR+LFSA+CY AKVT+ +LGE+FQAAR IM WLGDCAKVIAS
Sbjct: 782  GAREQIKRRLEEKGHITDDRLLFSAACYTAKVTMTALGELFQAARDIMNWLGDCAKVIAS 841

Query: 1438 ENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSL 1617
            E++PVRWTTPLGLPV+QPY  SERHLIRTSLQVLALQREG SV V+ Q+TAFPPNFVHSL
Sbjct: 842  EDQPVRWTTPLGLPVLQPYYKSERHLIRTSLQVLALQREGSSVEVRKQRTAFPPNFVHSL 901

Query: 1618 DGSHMMMTAIACRKAGLQFAGVHDSFW 1698
            DGSHMMMTA+ACR A L+FAGVHDSFW
Sbjct: 902  DGSHMMMTAVACRDADLRFAGVHDSFW 928


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Fragaria
            vesca subsp. vesca]
          Length = 973

 Score =  939 bits (2426), Expect = 0.0
 Identities = 441/567 (77%), Positives = 507/567 (89%), Gaps = 1/567 (0%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYL 177
            PLDQ A  PP++RPAFRH  K   K  G KL   +GVIECD LV  GLD TA+HM+IPY+
Sbjct: 343  PLDQLADGPPDVRPAFRHRLKAAAKSPGQKLVKNYGVIECDPLVLAGLDKTAKHMLIPYV 402

Query: 178  PMLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKW 357
            PML+PPK+WKGYDKGGHL++PSYVMRTHGS++Q D +++   +Q++KVFEALD LGSTKW
Sbjct: 403  PMLVPPKRWKGYDKGGHLFLPSYVMRTHGSRKQVDTMRNISGRQMQKVFEALDMLGSTKW 462

Query: 358  RVNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEM 537
            R+N++VL+V+E +W+RGGN+AGL+DRED+P+PE+P SED T I+EWRW++RKAKK N E 
Sbjct: 463  RINKKVLNVVESIWARGGNIAGLVDREDVPVPEKPPSEDPTEIQEWRWSARKAKKLNQER 522

Query: 538  HAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGR 717
            H+QRCD ELKLSVAR+MKDE+GFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGR
Sbjct: 523  HSQRCDTELKLSVARRMKDEDGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGR 582

Query: 718  PLGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAED 897
            PLGKSGLRWLKIHLAN+Y GGVEKLSYDGR++FV+NHI +IFDSA NPVNG  WW+ AED
Sbjct: 583  PLGKSGLRWLKIHLANLYSGGVEKLSYDGRISFVDNHIDDIFDSATNPVNGNRWWLTAED 642

Query: 898  PFQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE 1077
            P QCLAAC+NLS+AL SPSPH+VISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE
Sbjct: 643  PLQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE 702

Query: 1078 KPADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFV 1257
            KPADVYS IA RV D M +DS KDP T+P ALLAKVL++Q+DRKLVKQTVMTSVYGVT+V
Sbjct: 703  KPADVYSEIAVRVHDIMKRDSNKDPTTNPNALLAKVLVNQIDRKLVKQTVMTSVYGVTYV 762

Query: 1258 GAREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIAS 1437
            GAREQIKRRL E+G ITDDR+LF+A+CYAAKVTL +LGE+FQAARGIM WLGDCAKVIAS
Sbjct: 763  GAREQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIAS 822

Query: 1438 ENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSL 1617
            EN+PVRWTTPLGLPVVQPY  SERHLIRTSLQVLALQRE + V V+ Q+TAFPPNFVHSL
Sbjct: 823  ENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNLVDVRKQRTAFPPNFVHSL 882

Query: 1618 DGSHMMMTAIACRKAGLQFAGVHDSFW 1698
            DGSHMMMTA+ACR AG++FAGVHDSFW
Sbjct: 883  DGSHMMMTALACRDAGIRFAGVHDSFW 909


>ref|XP_011018068.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Populus
            euphratica]
          Length = 983

 Score =  938 bits (2424), Expect = 0.0
 Identities = 440/567 (77%), Positives = 507/567 (89%), Gaps = 1/567 (0%)
 Frame = +1

Query: 1    PLDQSACSPPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYL 177
            P++QS   PP++RPAFRH FKT+TK  G K+  K+GVIECD L+  GLD TA+HM+IPY 
Sbjct: 353  PVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLDGTAKHMLIPYF 412

Query: 178  PMLIPPKKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKW 357
            PML+PPKKWKGYDKGGHL++PSY+MRTHGS++QQ A++S P KQ++KVFEALDTLG+TKW
Sbjct: 413  PMLVPPKKWKGYDKGGHLFLPSYIMRTHGSRQQQVAVRSVPGKQMQKVFEALDTLGNTKW 472

Query: 358  RVNRRVLDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEM 537
            RVNRR+LDV+E +W+ GGN+AGL+DREDIPIPE+P S+DLT I++W+W+ RKAKK N E 
Sbjct: 473  RVNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQER 532

Query: 538  HAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGR 717
            H+QRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMH HL HLSSD+CRG+LEF EGR
Sbjct: 533  HSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGR 592

Query: 718  PLGKSGLRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAED 897
            PLGKSGLRWLKIHLAN+Y GGVEKLS+DGRL FVENH+  IFDSA NPVNGK WW+ AED
Sbjct: 593  PLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPVNGKRWWLKAED 652

Query: 898  PFQCLAACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE 1077
            PFQCLAAC+NLS+AL S SPH+VISHLPIHQDGSCNGLQHYAALGRD+LEAAAVNLVA E
Sbjct: 653  PFQCLAACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAAE 712

Query: 1078 KPADVYSGIAARVLDFMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFV 1257
            KP+DVYS IA RV + + +DS KDPAT+P ALLAK+L+DQVDRKLVKQTVMTSVYGVT+V
Sbjct: 713  KPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQTVMTSVYGVTYV 772

Query: 1258 GAREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARGIMKWLGDCAKVIAS 1437
            GAREQIKRRL E+G ITDDR+LFSA+CY AKVTL +LGE+FQAAR IM WLGDCAK+IAS
Sbjct: 773  GAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMSWLGDCAKIIAS 832

Query: 1438 ENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSL 1617
            E++PV+WTTPLGLPVVQPY   ERHLI+TSLQ+LALQREG SV V+ Q+TAFPPNFVHSL
Sbjct: 833  EDQPVQWTTPLGLPVVQPYYKRERHLIKTSLQILALQREGSSVQVRKQRTAFPPNFVHSL 892

Query: 1618 DGSHMMMTAIACRKAGLQFAGVHDSFW 1698
            DGSHMMMTA+ACR AGL FAGVHDSFW
Sbjct: 893  DGSHMMMTAVACRDAGLCFAGVHDSFW 919