BLASTX nr result
ID: Ophiopogon23_contig00010534
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00010534
(442 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020273292.1| probable RNA polymerase II transcription fac... 87 2e-21
gb|ONK79246.1| uncharacterized protein A4U43_C01F4410 [Asparagus... 78 1e-18
gb|OVA05707.1| BSD [Macleaya cordata] 69 5e-17
gb|EMS48309.1| hypothetical protein TRIUR3_27691 [Triticum urartu] 74 1e-16
dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare] 72 5e-16
ref|XP_020155416.1| probable RNA polymerase II transcription fac... 71 7e-16
emb|CDM85606.1| unnamed protein product [Triticum aestivum] 71 7e-16
ref|XP_015696110.1| PREDICTED: probable RNA polymerase II transc... 74 7e-16
ref|XP_015696111.1| PREDICTED: probable RNA polymerase II transc... 74 7e-16
ref|XP_015696112.1| PREDICTED: probable RNA polymerase II transc... 74 7e-16
gb|EMS68190.1| hypothetical protein TRIUR3_14719 [Triticum urartu] 70 1e-15
gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indi... 72 2e-15
ref|XP_015650974.1| PREDICTED: probable RNA polymerase II transc... 72 2e-15
ref|XP_015650975.1| PREDICTED: probable RNA polymerase II transc... 72 2e-15
ref|XP_015650976.1| PREDICTED: probable RNA polymerase II transc... 72 2e-15
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 66 2e-15
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 66 2e-15
dbj|BAK04994.1| predicted protein, partial [Hordeum vulgare subs... 70 2e-15
ref|XP_010644655.1| PREDICTED: probable RNA polymerase II transc... 66 2e-15
ref|XP_010032566.1| PREDICTED: probable RNA polymerase II transc... 65 3e-15
>ref|XP_020273292.1| probable RNA polymerase II transcription factor B subunit 1-1
[Asparagus officinalis]
Length = 605
Score = 87.4 bits (215), Expect(2) = 2e-21
Identities = 47/61 (77%), Positives = 48/61 (78%)
Frame = -2
Query: 306 GGYTSNVFRFSFLNLLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQ 127
G T + F NLL N G RT KQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQ
Sbjct: 156 GVLTESEFWRQDKNLLGNDGRRTLKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQ 215
Query: 126 I 124
I
Sbjct: 216 I 216
Score = 42.7 bits (99), Expect(2) = 2e-21
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFW 314
ELQKL KEFVIGG+LTE+EFW
Sbjct: 144 ELQKLHKEFVIGGVLTESEFW 164
>gb|ONK79246.1| uncharacterized protein A4U43_C01F4410 [Asparagus officinalis]
Length = 596
Score = 78.2 bits (191), Expect(2) = 1e-18
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -2
Query: 243 RTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
RT KQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI
Sbjct: 168 RTLKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 207
Score = 42.7 bits (99), Expect(2) = 1e-18
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFW 314
ELQKL KEFVIGG+LTE+EFW
Sbjct: 144 ELQKLHKEFVIGGVLTESEFW 164
>gb|OVA05707.1| BSD [Macleaya cordata]
Length = 608
Score = 68.6 bits (166), Expect(2) = 5e-17
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = -2
Query: 243 RTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
RTSKQR G KSAM+ADVRP DGR NKV FSLTPEIIHQI
Sbjct: 179 RTSKQRVGFKSAMIADVRPLTDGRTNKVTFSLTPEIIHQI 218
Score = 46.6 bits (109), Expect(2) = 5e-17
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL K+FVIGG+LTEAEFW TR+
Sbjct: 146 ELQKLHKQFVIGGVLTEAEFWATRK 170
>gb|EMS48309.1| hypothetical protein TRIUR3_27691 [Triticum urartu]
Length = 592
Score = 73.9 bits (180), Expect(2) = 1e-16
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = -2
Query: 267 NLLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQIQE 118
NLLD+ ++ SKQ+ G KSAMLADVRPSADG+ NKV FSLT EIIHQ+QE
Sbjct: 170 NLLDDETNKASKQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQMQE 219
Score = 40.0 bits (92), Expect(2) = 1e-16
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL K+FV+G IL E+EFW TR+
Sbjct: 145 ELQKLHKKFVLGNILQESEFWATRK 169
>dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 71.6 bits (174), Expect(2) = 5e-16
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = -2
Query: 267 NLLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
NLLD+ +++SKQ+ G KSAMLADVRPSADG+ NKV FSLT EIIHQI
Sbjct: 170 NLLDDETNKSSKQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQI 217
Score = 40.0 bits (92), Expect(2) = 5e-16
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL K+FV+G IL E+EFW TR+
Sbjct: 145 ELQKLHKKFVLGNILQESEFWATRK 169
>ref|XP_020155416.1| probable RNA polymerase II transcription factor B subunit 1-1
[Aegilops tauschii subsp. tauschii]
Length = 600
Score = 71.2 bits (173), Expect(2) = 7e-16
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = -2
Query: 267 NLLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
NLLD+ ++ SKQ+ G KSAMLADVRPSADG+ NKV FSLT EIIHQI
Sbjct: 170 NLLDDETNKASKQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQI 217
Score = 40.0 bits (92), Expect(2) = 7e-16
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL K+FV+G IL E+EFW TR+
Sbjct: 145 ELQKLHKKFVLGNILQESEFWATRK 169
>emb|CDM85606.1| unnamed protein product [Triticum aestivum]
Length = 600
Score = 71.2 bits (173), Expect(2) = 7e-16
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = -2
Query: 267 NLLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
NLLD+ ++ SKQ+ G KSAMLADVRPSADG+ NKV FSLT EIIHQI
Sbjct: 170 NLLDDETNKASKQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQI 217
Score = 40.0 bits (92), Expect(2) = 7e-16
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL K+FV+G IL E+EFW TR+
Sbjct: 145 ELQKLHKKFVLGNILQESEFWATRK 169
>ref|XP_015696110.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Oryza brachyantha]
Length = 559
Score = 73.9 bits (180), Expect(2) = 7e-16
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = -2
Query: 267 NLLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
NLLD+ ++ SKQR G KSAMLADVRPSADGR NKV FSLT EIIHQI
Sbjct: 125 NLLDDEANKGSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQI 172
Score = 37.4 bits (85), Expect(2) = 7e-16
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL ++ VIG IL E+EFW TR+
Sbjct: 100 ELQKLHRKLVIGNILQESEFWATRK 124
>ref|XP_015696111.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X2 [Oryza brachyantha]
Length = 545
Score = 73.9 bits (180), Expect(2) = 7e-16
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = -2
Query: 267 NLLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
NLLD+ ++ SKQR G KSAMLADVRPSADGR NKV FSLT EIIHQI
Sbjct: 125 NLLDDEANKGSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQI 172
Score = 37.4 bits (85), Expect(2) = 7e-16
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL ++ VIG IL E+EFW TR+
Sbjct: 100 ELQKLHRKLVIGNILQESEFWATRK 124
>ref|XP_015696112.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-3 isoform X3 [Oryza brachyantha]
Length = 482
Score = 73.9 bits (180), Expect(2) = 7e-16
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = -2
Query: 267 NLLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
NLLD+ ++ SKQR G KSAMLADVRPSADGR NKV FSLT EIIHQI
Sbjct: 125 NLLDDEANKGSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQI 172
Score = 37.4 bits (85), Expect(2) = 7e-16
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL ++ VIG IL E+EFW TR+
Sbjct: 100 ELQKLHRKLVIGNILQESEFWATRK 124
>gb|EMS68190.1| hypothetical protein TRIUR3_14719 [Triticum urartu]
Length = 667
Score = 70.5 bits (171), Expect(2) = 1e-15
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = -2
Query: 267 NLLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
NLLD+ ++ SKQ+ G KSAMLADVRPSADG+ NKV FSLT EIIHQ+
Sbjct: 170 NLLDDETNKASKQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQL 217
Score = 40.0 bits (92), Expect(2) = 1e-15
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL K+FV+G IL E+EFW TR+
Sbjct: 145 ELQKLHKKFVLGNILQESEFWATRK 169
>gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indica Group]
gb|EEE68517.1| hypothetical protein OsJ_26954 [Oryza sativa Japonica Group]
Length = 625
Score = 72.4 bits (176), Expect(2) = 2e-15
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = -2
Query: 267 NLLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
NLL++ ++ SKQR G KSAMLADVRPSADGR NKV FSLT EIIHQI
Sbjct: 170 NLLEDEANKGSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQI 217
Score = 37.7 bits (86), Expect(2) = 2e-15
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL +FV+G IL E+EFW TR+
Sbjct: 145 ELQKLHMKFVLGNILQESEFWATRK 169
>ref|XP_015650974.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Oryza sativa Japonica Group]
Length = 606
Score = 72.4 bits (176), Expect(2) = 2e-15
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = -2
Query: 267 NLLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
NLL++ ++ SKQR G KSAMLADVRPSADGR NKV FSLT EIIHQI
Sbjct: 170 NLLEDEANKGSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQI 217
Score = 37.7 bits (86), Expect(2) = 2e-15
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL +FV+G IL E+EFW TR+
Sbjct: 145 ELQKLHMKFVLGNILQESEFWATRK 169
>ref|XP_015650975.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X2 [Oryza sativa Japonica Group]
dbj|BAD03200.1| unknown protein [Oryza sativa Japonica Group]
dbj|BAF23497.1| Os08g0338200 [Oryza sativa Japonica Group]
dbj|BAG90767.1| unnamed protein product [Oryza sativa Japonica Group]
dbj|BAT04988.1| Os08g0338200 [Oryza sativa Japonica Group]
Length = 604
Score = 72.4 bits (176), Expect(2) = 2e-15
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = -2
Query: 267 NLLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
NLL++ ++ SKQR G KSAMLADVRPSADGR NKV FSLT EIIHQI
Sbjct: 170 NLLEDEANKGSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQI 217
Score = 37.7 bits (86), Expect(2) = 2e-15
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL +FV+G IL E+EFW TR+
Sbjct: 145 ELQKLHMKFVLGNILQESEFWATRK 169
>ref|XP_015650976.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X3 [Oryza sativa Japonica Group]
Length = 526
Score = 72.4 bits (176), Expect(2) = 2e-15
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = -2
Query: 267 NLLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
NLL++ ++ SKQR G KSAMLADVRPSADGR NKV FSLT EIIHQI
Sbjct: 90 NLLEDEANKGSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQI 137
Score = 37.7 bits (86), Expect(2) = 2e-15
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL +FV+G IL E+EFW TR+
Sbjct: 65 ELQKLHMKFVLGNILQESEFWATRK 89
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 66.2 bits (160), Expect(2) = 2e-15
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = -2
Query: 264 LLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
LLD RTSKQR G KSAM++D++P DGR N+V F+LTPEIIHQI
Sbjct: 209 LLDGNTSRTSKQRVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQI 255
Score = 43.5 bits (101), Expect(2) = 2e-15
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL K+FV+ G+LTEAEFW TR+
Sbjct: 183 ELQKLHKQFVLSGVLTEAEFWATRK 207
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Vitis vinifera]
emb|CBI39821.3| unnamed protein product, partial [Vitis vinifera]
Length = 602
Score = 66.2 bits (160), Expect(2) = 2e-15
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = -2
Query: 264 LLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
LLD RTSKQR G KSAM++D++P DGR N+V F+LTPEIIHQI
Sbjct: 166 LLDGNTSRTSKQRVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQI 212
Score = 43.5 bits (101), Expect(2) = 2e-15
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL K+FV+ G+LTEAEFW TR+
Sbjct: 140 ELQKLHKQFVLSGVLTEAEFWATRK 164
>dbj|BAK04994.1| predicted protein, partial [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 69.7 bits (169), Expect(2) = 2e-15
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = -2
Query: 267 NLLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
NLLD+ + SKQ+ G KSAMLADVRPSADG+ NKV FSLT EIIHQI
Sbjct: 166 NLLDDETSKGSKQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQI 213
Score = 40.0 bits (92), Expect(2) = 2e-15
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL K+FV+G IL E+EFW TR+
Sbjct: 141 ELQKLHKKFVLGNILQESEFWATRK 165
>ref|XP_010644655.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X2 [Vitis vinifera]
Length = 576
Score = 66.2 bits (160), Expect(2) = 2e-15
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = -2
Query: 264 LLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
LLD RTSKQR G KSAM++D++P DGR N+V F+LTPEIIHQI
Sbjct: 166 LLDGNTSRTSKQRVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQI 212
Score = 43.5 bits (101), Expect(2) = 2e-15
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL K+FV+ G+LTEAEFW TR+
Sbjct: 140 ELQKLHKQFVLSGVLTEAEFWATRK 164
>ref|XP_010032566.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 [Eucalyptus grandis]
gb|KCW51964.1| hypothetical protein EUGRSUZ_J01409 [Eucalyptus grandis]
Length = 596
Score = 64.7 bits (156), Expect(2) = 3e-15
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = -2
Query: 264 LLDNAGHRTSKQRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQI 124
LLD R SKQR G KSAM++D++P+ DGR NKV FSLTPE+I QI
Sbjct: 165 LLDRESSRKSKQRVGFKSAMISDIKPATDGRTNKVTFSLTPEVILQI 211
Score = 44.7 bits (104), Expect(2) = 3e-15
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -1
Query: 376 ELQKLQKEFVIGGILTEAEFWFTRR 302
ELQKL K+ VIGGILTEAEFW TR+
Sbjct: 139 ELQKLHKQLVIGGILTEAEFWATRK 163