BLASTX nr result
ID: Ophiopogon23_contig00009522
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00009522
(383 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK55587.1| uncharacterized protein A4U43_UnF1210 [Asparagus ... 212 3e-63
gb|OVA13816.1| Pentatricopeptide repeat [Macleaya cordata] 190 2e-54
ref|XP_010251831.1| PREDICTED: pentatricopeptide repeat-containi... 180 7e-51
gb|PKA58501.1| Pentatricopeptide repeat-containing protein [Apos... 157 2e-42
ref|XP_010655542.1| PREDICTED: pentatricopeptide repeat-containi... 108 7e-25
ref|XP_008462708.1| PREDICTED: pentatricopeptide repeat-containi... 108 1e-24
ref|XP_006406821.1| pentatricopeptide repeat-containing protein ... 105 1e-23
ref|XP_015388711.1| PREDICTED: pentatricopeptide repeat-containi... 104 1e-23
ref|XP_011660280.1| PREDICTED: pentatricopeptide repeat-containi... 104 2e-23
ref|XP_024044094.1| pentatricopeptide repeat-containing protein ... 103 3e-23
dbj|GAY61185.1| hypothetical protein CUMW_207880 [Citrus unshiu] 103 3e-23
gb|PNT06678.1| hypothetical protein POPTR_013G044700v3 [Populus ... 103 4e-23
ref|XP_007134420.1| hypothetical protein PHAVU_010G046000g [Phas... 103 6e-23
gb|EOA30113.1| hypothetical protein CARUB_v10013224mg [Capsella ... 102 7e-23
ref|XP_023642083.1| pentatricopeptide repeat-containing protein ... 102 7e-23
pdb|5IWW|D Chain D, Crystal structure of RNA editing factor of d... 100 1e-22
gb|POO03448.1| Tetratricopeptide-like helical domain containing ... 101 2e-22
ref|XP_015059067.1| PREDICTED: pentatricopeptide repeat-containi... 101 2e-22
ref|XP_004250511.2| PREDICTED: pentatricopeptide repeat-containi... 101 2e-22
ref|XP_002885157.1| pentatricopeptide repeat-containing protein ... 101 2e-22
>gb|ONK55587.1| uncharacterized protein A4U43_UnF1210 [Asparagus officinalis]
Length = 616
Score = 212 bits (540), Expect = 3e-63
Identities = 100/128 (78%), Positives = 119/128 (92%), Gaps = 1/128 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
QLR+LHQGKW HA+VV+SGF++DTVISTALLDMYANCG+LGLAN++F EMHTKDLI+WNC
Sbjct: 222 QLRVLHQGKWIHAFVVRSGFSADTVISTALLDMYANCGDLGLANQIFGEMHTKDLIAWNC 281
Query: 181 LVSCYAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
LVSCYAQYG +E+AF+LFI+MQN+ LKPN SSL+GILPAVAR G+LH +KSCH FILRNG
Sbjct: 282 LVSCYAQYGSVENAFKLFIDMQNSKLKPNGSSLSGILPAVARFGSLHHTKSCHCFILRNG 341
Query: 358 MELDEFVL 381
+E DEFV+
Sbjct: 342 LESDEFVI 349
Score = 76.3 bits (186), Expect = 1e-13
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
LH K H +++++G SD + TAL+D YA G+L A+ +F+ M K +++W+ ++S
Sbjct: 327 LHHTKSCHCFILRNGLESDEFVITALMDTYAKSGDLSTAHNLFDGMPKKSVVAWSAIISG 386
Query: 193 YAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSG 309
Y +G +A LF M T +KPN + G+L A SG
Sbjct: 387 YGTHGCCNEALSLFDKMLETNIKPNHVTYVGLLSACVHSG 426
Score = 68.9 bits (167), Expect = 5e-11
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L G H VVK G+ + ++ A++DMY G+ A +VF+ M KD ++WN +V+
Sbjct: 125 LSGGAQIHGQVVKLGYVRNPFVAVAVMDMYMKSGQSFDAEKVFDGMGEKDGVAWNAMVTG 184
Query: 193 YAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGMELD 369
Q G E+A ++F M+ + ++A ++ A ++ LH K H+F++R+G D
Sbjct: 185 LVQSGRAEEALEVFERMRREGVGVGCVAVASVVAACSQLRVLHQGKWIHAFVVRSGFSAD 244
Query: 370 EFV 378
+
Sbjct: 245 TVI 247
>gb|OVA13816.1| Pentatricopeptide repeat [Macleaya cordata]
Length = 684
Score = 190 bits (482), Expect = 2e-54
Identities = 88/128 (68%), Positives = 106/128 (82%), Gaps = 1/128 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
Q+R LHQGKW H+WV K+GF +D +I TALLDMYAN +LG A ++FEEM TKDLI+WNC
Sbjct: 223 QMRFLHQGKWIHSWVFKTGFEADIIIGTALLDMYANSADLGFAKQIFEEMITKDLIAWNC 282
Query: 181 LVSCYAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
L+SC AQ GLIED+F+LFI MQ + LKPN SSLAGILPAVAR G LHL KSCH F +RNG
Sbjct: 283 LISCSAQNGLIEDSFKLFIEMQGSGLKPNGSSLAGILPAVARCGALHLGKSCHGFAIRNG 342
Query: 358 MELDEFVL 381
++LDE+V+
Sbjct: 343 LDLDEYVM 350
Score = 73.9 bits (180), Expect = 9e-13
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = +1
Query: 10 LLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVS 189
+L G H VK GF+S+ + +++DMY GE+ A +F+ M +D++SWN L++
Sbjct: 125 MLRHGTQIHGHSVKLGFSSNPFVGVSMIDMYMKNGEIESARLMFDGMLERDVVSWNALLT 184
Query: 190 CYAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGMEL 366
Y Q G E+A ++ M+ + N S+ ++ A ++ LH K HS++ + G E
Sbjct: 185 GYTQNGKPEEALGVYNRMRKEGVDTNFVSITNVINACSQMRFLHQGKWIHSWVFKTGFEA 244
Query: 367 D 369
D
Sbjct: 245 D 245
Score = 72.4 bits (176), Expect = 3e-12
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
LH GK H + +++G D + TAL+D+YA G+L A +F+ + TK +++W+ +++
Sbjct: 328 LHLGKSCHGFAIRNGLDLDEYVMTALIDVYAKSGDLIAARRLFDFIPTKSVVAWSSMIAG 387
Query: 193 YAQYGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSG 309
Y +G +A LF M + KPN + G+L A A SG
Sbjct: 388 YGSHGFCAEALMLFEKMLASKFKPNYITYIGVLSACAHSG 427
>ref|XP_010251831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
chloroplastic-like [Nelumbo nucifera]
Length = 681
Score = 180 bits (457), Expect = 7e-51
Identities = 83/128 (64%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
QLR LHQGKW H+WV+K+GF +D VISTALL+MYAN G+ L ++FEEM TKDLI+WNC
Sbjct: 220 QLRFLHQGKWIHSWVIKNGFGADVVISTALLEMYANSGDFWLTKKLFEEMPTKDLIAWNC 279
Query: 181 LVSCYAQYGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
L+SCY Q G+I D+F+LF MQ N LKPN S+LAGILPAV R G LHL +SCH F +RN
Sbjct: 280 LISCYVQSGMIGDSFELFRKMQHNGLKPNGSTLAGILPAVGRVGALHLVRSCHGFAIRNA 339
Query: 358 MELDEFVL 381
++LDE+V+
Sbjct: 340 LDLDEYVM 347
Score = 72.8 bits (177), Expect = 2e-12
Identities = 39/121 (32%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Frame = +1
Query: 10 LLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVS 189
+L QG HA VK G S ++ AL+DMY G + A +F+ M +D++SWN +S
Sbjct: 122 MLSQGAQLHAHCVKFGLNSSPFVTVALMDMYMKNGLIDSARRLFDRMVERDVVSWNAFLS 181
Query: 190 CYAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGMEL 366
Y+Q G E+A ++ M+ + + ++A ++ A ++ LH K HS++++NG
Sbjct: 182 GYSQNGRPEEALGVYNRMRVAGVTVDFVAIASVISACSQLRFLHQGKWIHSWVIKNGFGA 241
Query: 367 D 369
D
Sbjct: 242 D 242
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
LH + H + +++ D + TAL+D +A +L A +F + K +++W+ ++
Sbjct: 325 LHLVRSCHGFAIRNALDLDEYVMTALMDAFAKSSDLVAAQRLFNLIPNKSVVAWSSMIDG 384
Query: 193 YAQYGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSG 309
Y +G + LF MQ N +KPN + G+L A A +G
Sbjct: 385 YGTHGYGAEPIILFEKMQENNIKPNHITYVGVLSACAHAG 424
>gb|PKA58501.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 697
Score = 157 bits (398), Expect = 2e-42
Identities = 74/127 (58%), Positives = 101/127 (79%), Gaps = 1/127 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
QL+LLHQGK+ HAWV+K GF +DTV +TAL++MYANC ++ AN VF+EM+ KDL+SWNC
Sbjct: 236 QLQLLHQGKFIHAWVLKYGFDADTVTATALIEMYANCEDVKSANRVFDEMNAKDLVSWNC 295
Query: 181 LVSCYAQYGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
L++ A+ G IE A +L ++MQ + LKPN SSLAGILP++A++G LH+ KSCH F +R+
Sbjct: 296 LIAGCARKGFIEGAIRLLVDMQKHGLKPNGSSLAGILPSIAQTGMLHMGKSCHGFTIRHH 355
Query: 358 MELDEFV 378
+ DEFV
Sbjct: 356 LAEDEFV 362
Score = 71.6 bits (174), Expect = 6e-12
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +1
Query: 10 LLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVS 189
+L G H+ +K GF S+ ++ A +DMY E+ A +VF+ M +D ++WN LV+
Sbjct: 138 VLDCGVQLHSHSIKCGFISNFFVAAAAMDMYMKNAEVERARKVFDGMPERDTVAWNVLVT 197
Query: 190 CYAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGMEL 366
Y+Q + ++A + MQ+ +S++A IL A ++ LH K H+++L+ G +
Sbjct: 198 GYSQNWMSKEALAAYNEMQSAGFDVGQSAVASILSACSQLQLLHQGKFIHAWVLKYGFDA 257
Query: 367 D 369
D
Sbjct: 258 D 258
Score = 71.6 bits (174), Expect = 6e-12
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
Q +LH GK H + ++ A D + ALLD YA G+L +A +F+ M ++ ++ W+
Sbjct: 337 QTGMLHMGKSCHGFTIRHHLAEDEFVRAALLDFYAKSGDLRIAQRIFDTMSSRSVVDWSA 396
Query: 181 LVSCYAQYGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSGTLHLSK 327
+++ Y +G A LF M + +PN + G+L A SG + K
Sbjct: 397 MIAGYGTHGNGTKALDLFDEMLASNARPNHVTFVGVLSACVHSGLIEKGK 446
>ref|XP_010655542.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Vitis vinifera]
Length = 876
Score = 108 bits (270), Expect = 7e-25
Identities = 53/123 (43%), Positives = 72/123 (58%)
Frame = +1
Query: 10 LLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVS 189
LL GK H ++ ++ SD +S AL+DMYA CG +G A+ VF EM KD++SWN ++
Sbjct: 419 LLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIG 478
Query: 190 CYAQYGLIEDAFQLFINMQNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGMELD 369
Y++ L +A LF+ MQ KPN ++A ILPA A L + H ILRNG LD
Sbjct: 479 GYSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLD 538
Query: 370 EFV 378
V
Sbjct: 539 RHV 541
Score = 79.0 bits (193), Expect = 2e-14
Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Frame = +1
Query: 10 LLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVS 189
+L G+ H + +K+ F + ++ LLDMY+ G L A +VFE M + ++SW +++
Sbjct: 318 MLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIA 377
Query: 190 CYAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGMEL 366
YA+ GL + + +LF M+ + P+ ++ IL A A +G L K H++I N M+
Sbjct: 378 GYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQS 437
Query: 367 DEFV 378
D FV
Sbjct: 438 DLFV 441
Score = 79.0 bits (193), Expect = 2e-14
Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Frame = +1
Query: 4 LRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCL 183
L L +G+ H ++++GF+ D ++ AL+DMY CG LGLA +F+ + KDL+SW +
Sbjct: 517 LAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVM 576
Query: 184 VSCYAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTL 315
++ Y +G +A F M+N+ ++P+E S IL A + SG L
Sbjct: 577 IAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLL 621
Score = 59.3 bits (142), Expect = 1e-07
Identities = 29/119 (24%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Frame = +1
Query: 4 LRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCL 183
L+ + G+ H+ + + D V+ + L+ MY CG+L +F+++ + + WN L
Sbjct: 114 LKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLL 173
Query: 184 VSCYAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
++ YA+ G ++ LF M+ +K N + + ++ A SG++ + H+++ R G
Sbjct: 174 MNGYAKIGNFRESLSLFKRMRELGVKMNSYTFSCVMKCYAASGSVEEGEGVHAYLSRLG 232
Score = 58.2 bits (139), Expect = 3e-07
Identities = 28/114 (24%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
+ +G+ HA++ + GF S + +L+ Y + A ++F+E+ +D+ISWN ++S
Sbjct: 218 VEEGEGVHAYLSRLGFGSYNTVVNSLIAFYFKIRRVESARKLFDELGDRDVISWNSMISG 277
Query: 193 YAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILR 351
Y GL E LF M + + +++ ++ + +G L L ++ H + ++
Sbjct: 278 YVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIK 331
>ref|XP_008462708.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Cucumis melo]
Length = 766
Score = 108 bits (269), Expect = 1e-24
Identities = 48/123 (39%), Positives = 78/123 (63%), Gaps = 1/123 (0%)
Frame = +1
Query: 4 LRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCL 183
++ L GKWFHA+++++GF + TAL+DMY CG++G A +F + KD+ W+ L
Sbjct: 306 VKTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVEKKDVKIWSAL 365
Query: 184 VSCYAQYGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGM 360
+S YA ++ F LF+ M N +KPN+ ++ +L A +GTL L K H++I R+G+
Sbjct: 366 ISAYAHVSCMDQVFNLFLEMLDNEVKPNKVTMVSLLSLCAEAGTLDLGKWTHAYINRHGL 425
Query: 361 ELD 369
E+D
Sbjct: 426 EVD 428
Score = 78.6 bits (192), Expect = 2e-14
Identities = 37/123 (30%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L GKW HA++ + G D ++ TAL++MY CG++ +A +F+E +D+ WN +++
Sbjct: 410 LDLGKWTHAYINRHGLEVDVILETALINMYVKCGDVTIARSLFDEATQRDIHMWNAMMAG 469
Query: 193 YAQYGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTL-----HLSKSCHSFILRN 354
++ +G ++A +LF M+ + ++PN+ + I A + SG + H ++ H+F +
Sbjct: 470 FSMHGCGKEALELFSEMESHGVEPNDITFISIFHACSHSGLVVEGKKHFNRMVHNFGIVP 529
Query: 355 GME 363
ME
Sbjct: 530 KME 532
Score = 67.4 bits (163), Expect = 2e-10
Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = +1
Query: 22 GKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSCYAQ 201
G+ H + K+GFASD + AL++MY CG L A+ VF++M +D++SW+ ++ CY +
Sbjct: 108 GRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSASLVFDKMPERDVVSWSTMLGCYVR 167
Query: 202 YGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRN 354
+A +L MQ +K + +L ++ + ++ H +I+RN
Sbjct: 168 SKAFGEALRLVREMQFVGVKLSGVALISLIGVFGNLLDMKSGRAVHGYIMRN 219
Score = 59.3 bits (142), Expect = 1e-07
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Frame = +1
Query: 13 LHQGKWFHAWVVKS--GFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLV 186
+ G+ H +++++ + ++TAL+DMY C L A +F+ + + ++SW ++
Sbjct: 206 MKSGRAVHGYIMRNVGDEKMEVSLTTALIDMYCKCECLASAQRLFDRLSKRSVVSWTVMI 265
Query: 187 -SCYAQYGLIEDAFQLFINMQNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
C L+E A ++ L PNE +L ++ TL L K H+++LRNG
Sbjct: 266 KGCIRSCRLVEGAKNFNRMLEEKLFPNEITLLSLITECGFVKTLDLGKWFHAYLLRNG 323
>ref|XP_006406821.1| pentatricopeptide repeat-containing protein At3g16610 [Eutrema
salsugineum]
ref|XP_024015537.1| pentatricopeptide repeat-containing protein At3g16610 [Eutrema
salsugineum]
gb|ESQ48274.1| hypothetical protein EUTSA_v10022175mg [Eutrema salsugineum]
Length = 655
Score = 105 bits (261), Expect = 1e-23
Identities = 50/124 (40%), Positives = 79/124 (63%), Gaps = 2/124 (1%)
Frame = +1
Query: 4 LRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCL 183
LR GK H+ V S FA+D + TAL+D YA CGEL +A +VF+EM +D+++WN L
Sbjct: 116 LRATEDGKLIHSHVKCSDFAADMYVCTALVDFYAKCGELDMAIQVFDEMPQRDIVAWNAL 175
Query: 184 VSCYAQYGLIEDAFQLFINMQNT--LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
+S ++ + + D LF++M+ + ++PN S++ G+ PA+ R+G L KS H++ RNG
Sbjct: 176 ISGFSLHCCLTDVAALFLDMRRSDGIRPNLSTIVGMFPALGRAGALREGKSVHAYCTRNG 235
Query: 358 MELD 369
D
Sbjct: 236 FSND 239
Score = 79.3 bits (194), Expect = 1e-14
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Frame = +1
Query: 4 LRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCL 183
L L G H + V G+A +T I AL+DMY CG+L +A VFE MH +D +SWN +
Sbjct: 423 LAALGHGSSCHGYCVVHGYAINTTICNALMDMYTKCGKLDVAKRVFETMHKRDTVSWNTM 482
Query: 184 VSCYAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGM 360
+ +GL ++A LF +M++T + +E + +L A + SG + K + + R
Sbjct: 483 MFGLGTHGLGKEALSLFDSMRDTGVNTDEVTFLAVLSACSHSGLVDEGKQVFNSMARGDF 542
Query: 361 EL 366
E+
Sbjct: 543 EV 544
Score = 64.7 bits (156), Expect = 2e-09
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +1
Query: 22 GKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSCYAQ 201
G+ H + +K+GF D + ++ YA G L A F E+ KD++S+N L+S +
Sbjct: 328 GRCVHCYAIKAGFMLDLTVGNTVISFYAKHGSLCDAFRQFSEIGVKDIVSYNSLISGCLE 387
Query: 202 YGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGMELD 369
E++ +LF +M+++ ++ N ++L G+L A + L SCH + + +G ++
Sbjct: 388 NYQAEESLRLFHDMKSSGIQTNITTLVGVLTACSHLAALGHGSSCHGYCVVHGYAIN 444
Score = 60.8 bits (146), Expect = 4e-08
Identities = 33/123 (26%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L +GK HA+ ++GF++D V+ T +LD+YA + A VF+ K+ ++W+ ++
Sbjct: 221 LREGKSVHAYCTRNGFSNDLVVKTGILDVYAKSKCIIYARRVFDSDTMKNEVTWSAMIGG 280
Query: 193 YAQYGLIEDAFQLFINM----QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGM 360
Y + +I++A ++F+ M ++ IL AR G + + H + ++ G
Sbjct: 281 YIENEMIKEAGEVFLRMLLVNSGVAVVTPVAVGLILMGCARIGDHNGGRCVHCYAIKAGF 340
Query: 361 ELD 369
LD
Sbjct: 341 MLD 343
>ref|XP_015388711.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Citrus sinensis]
gb|KDO50003.1| hypothetical protein CISIN_1g006627mg [Citrus sinensis]
Length = 638
Score = 104 bits (260), Expect = 1e-23
Identities = 46/120 (38%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L GKW HA+++++GF ++ AL+DMY C E+ A +F+ M +KD++ WN ++S
Sbjct: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
Query: 193 YAQYGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGMELD 369
YAQ I+ AF+LFI+M+ + ++PNE ++ G+L +G L + K H++I + G+E+D
Sbjct: 351 YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
Score = 83.2 bits (204), Expect = 5e-16
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L GKW H ++ K G D ++ TAL+DMYA CG++ A +F E +D+ WN +++
Sbjct: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
Query: 193 YAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKS 330
Y +G E+A F++M+ + +KPN + G+L A + +G + KS
Sbjct: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
Score = 79.7 bits (195), Expect = 9e-15
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
Q+ + H GK H + +K+G D +S AL+ MY+ CG L A +F+EM +D++SW+
Sbjct: 83 QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
Query: 181 LVSCYAQYGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRN 354
++ Y + GL E+A ++ M+ ++P+E ++ ++ A + L K+ H+ ++RN
Sbjct: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN 201
Score = 72.4 bits (176), Expect = 3e-12
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Frame = +1
Query: 22 GKWFHAWVVKS--GFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSCY 195
GK HA VV++ I+TAL+DMY+ CG L A ++F ++ ++SW ++S Y
Sbjct: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
Query: 196 AQYGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGME 363
+ I + +LF M + + P+E ++ ++ G L L K H++ILRNG E
Sbjct: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
>ref|XP_011660280.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Cucumis sativus]
gb|KGN66788.1| hypothetical protein Csa_1G690260 [Cucumis sativus]
Length = 765
Score = 104 bits (260), Expect = 2e-23
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L GKWFHA+++++GF + TAL+DMY CG++G A +F + KD+ W+ L+S
Sbjct: 308 LDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISA 367
Query: 193 YAQYGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGMELD 369
YA ++ F LF+ M N +KPN ++ +L A +G L L K H++I R+G+E+D
Sbjct: 368 YAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVD 427
Score = 77.8 bits (190), Expect = 4e-14
Identities = 38/123 (30%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L GKW HA++ + G D ++ TAL++MYA CG++ +A +F E +D+ WN +++
Sbjct: 409 LDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAG 468
Query: 193 YAQYGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTL-----HLSKSCHSFILRN 354
++ +G ++A +LF M+ + ++PN+ + I A + SG + + +K H F +
Sbjct: 469 FSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLVVEGKKYFNKMVHDFGIVP 528
Query: 355 GME 363
ME
Sbjct: 529 KME 531
Score = 67.0 bits (162), Expect = 3e-10
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Frame = +1
Query: 22 GKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSCYAQ 201
G+ H + K+GFASD + AL++MY CG L A VF++M +D++SW ++ CY +
Sbjct: 107 GRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVR 166
Query: 202 YGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRN 354
+A +L MQ +K + +L ++ + ++ H +I+RN
Sbjct: 167 SKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRN 218
Score = 59.7 bits (143), Expect = 9e-08
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Frame = +1
Query: 13 LHQGKWFHAWVVKS--GFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLV 186
+ G+ H ++V++ + ++TAL+DMY G L A +F+ + + ++SW ++
Sbjct: 205 MKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMI 264
Query: 187 S-CYAQYGLIEDAFQLFINMQNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
+ C L E A ++ L PNE +L ++ GTL L K H+++LRNG
Sbjct: 265 AGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNG 322
>ref|XP_024044094.1| pentatricopeptide repeat-containing protein At3g22690 [Citrus
clementina]
Length = 638
Score = 103 bits (258), Expect = 3e-23
Identities = 45/120 (37%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L G+W HA+++++GF ++ AL+DMY C E+ A +F+ M +KD+ +WN ++S
Sbjct: 291 LQLGRWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVTTWNAVISA 350
Query: 193 YAQYGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGMELD 369
YAQ I+ AF+LFI+M+ + ++PNE ++ G+L +G L + K H++I + G+E+D
Sbjct: 351 YAQAHCIDKAFELFIHMKVSKVRPNELTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
Score = 86.7 bits (213), Expect = 3e-17
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L GKW H ++ K G D ++ TAL+DMYA CG++ A +F E +D+ WN +++
Sbjct: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
Query: 193 YAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKS 330
Y +G E+A LFI+M+ + +KPN+ + G+L A + +G + KS
Sbjct: 452 YGMHGCGEEALILFIDMERSGVKPNDITFIGLLNACSHAGLVTEGKS 498
Score = 77.8 bits (190), Expect = 4e-14
Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
Q+ + GK H + +K+G D +S AL+ MY+ CG L A +F+EM +D++SW+
Sbjct: 83 QVLMTRLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
Query: 181 LVSCYAQYGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRN 354
++ Y + GL+E+A ++ M ++P+E +L ++ + L K+ H+ ++RN
Sbjct: 143 MIRGYHKGGLLEEALEVMREMHFMNVRPSEVALISMVSLFTDVADVELGKAIHACVVRN 201
Score = 72.4 bits (176), Expect = 3e-12
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Frame = +1
Query: 22 GKWFHAWVVKS--GFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSCY 195
GK HA VV++ I+TAL+DMY+ CG L A ++F+ ++ ++SW ++S Y
Sbjct: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFDRLNQSSVVSWTVMISGY 250
Query: 196 AQYGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGME 363
+ I + +LF M + + P+E ++ ++ G L L + H++ILRNG E
Sbjct: 251 IRCNEINEGIRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGRWLHAYILRNGFE 307
>dbj|GAY61185.1| hypothetical protein CUMW_207880 [Citrus unshiu]
Length = 577
Score = 103 bits (257), Expect = 3e-23
Identities = 45/120 (37%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L G+W HA+++++GF ++ AL+DMY C E+ A +F+ M +KD++ WN ++S
Sbjct: 230 LQLGRWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 289
Query: 193 YAQYGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGMELD 369
YAQ I+ AF+LFI+M+ + ++PNE ++ G+L +G L + K H++I + G+E+D
Sbjct: 290 YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 349
Score = 85.1 bits (209), Expect = 1e-16
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L GKW H ++ K G D ++ TAL+DMYA CG++ A +F E +D+ WN +++
Sbjct: 331 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 390
Query: 193 YAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKS 330
Y +G E+A FI+M+ + +KPN+ + G+L A + +G + KS
Sbjct: 391 YGMHGCGEEALIFFIDMERSGVKPNDITFIGLLNACSHAGLVTEGKS 437
Score = 77.8 bits (190), Expect = 4e-14
Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
Q+ + GK H + +K+G D +S AL+ MY+ CG L A +F+EM +D++SW+
Sbjct: 22 QVLMTRLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 81
Query: 181 LVSCYAQYGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRN 354
++ Y + GL+E+A ++ M ++P+E +L ++ + L K+ H+ ++RN
Sbjct: 82 MIRGYHKGGLLEEALEVMREMHFMNVRPSEVALISMVSLFTDVADVELGKAIHACVVRN 140
Score = 72.0 bits (175), Expect = 4e-12
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Frame = +1
Query: 22 GKWFHAWVVKS--GFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSCY 195
GK HA VV++ I+TAL+DMY+ CG L A ++F ++ ++SW ++S Y
Sbjct: 130 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 189
Query: 196 AQYGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGME 363
+ I + +LF M + + P+E ++ ++ G L L + H++ILRNG E
Sbjct: 190 IRCNEINEGIRLFAEMIEENVFPSEITILSLIIECGFVGDLQLGRWLHAYILRNGFE 246
>gb|PNT06678.1| hypothetical protein POPTR_013G044700v3 [Populus trichocarpa]
Length = 705
Score = 103 bits (257), Expect = 4e-23
Identities = 46/117 (39%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Frame = +1
Query: 22 GKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSCYAQ 201
GK HA+++++GF ++TAL+DMY CGE+ A +F+ M KD+++W ++S YAQ
Sbjct: 251 GKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQ 310
Query: 202 YGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGMELD 369
I+ AFQLF+ M+ N ++PNE ++ +L A +G L + K H++I + G+E+D
Sbjct: 311 ANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVD 367
Score = 86.3 bits (212), Expect = 5e-17
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L GKWFHA++ K G D ++ TAL+DMYA CG++ A +F E +D+ +WN +++
Sbjct: 349 LDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAG 408
Query: 193 YAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSG 309
Y +G E A +LF M+ +KPN+ + G L A + +G
Sbjct: 409 YGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAG 448
Score = 73.2 bits (178), Expect = 2e-12
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 23/142 (16%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
Q+ + GK H + VK+G SD + AL+ MY+ CG L A +F++M +D++SW+
Sbjct: 121 QISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWST 180
Query: 181 LVSCYAQ--YGL--------------------IEDAFQLFINM-QNTLKPNESSLAGILP 291
++ Y YG +E+ +LF+ M + + PN+ ++ ++
Sbjct: 181 MIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLII 240
Query: 292 AVARSGTLHLSKSCHSFILRNG 357
+ G + L K H++ILRNG
Sbjct: 241 SCGFVGAVQLGKRLHAYILRNG 262
>ref|XP_007134420.1| hypothetical protein PHAVU_010G046000g [Phaseolus vulgaris]
gb|ESW06414.1| hypothetical protein PHAVU_010G046000g [Phaseolus vulgaris]
Length = 1216
Score = 103 bits (256), Expect = 6e-23
Identities = 46/120 (38%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L GKW HA+ ++SGF V++TA +DMY CG+ +A VF KD + W+ ++S
Sbjct: 759 LELGKWLHAFTLRSGFTMSLVLATAFIDMYGKCGDARIARSVFSSFKGKDFMMWSAMISA 818
Query: 193 YAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGMELD 369
YAQ I +AF +FI M + ++PNE ++ +L A++G+L + K HS+I + G++ D
Sbjct: 819 YAQNNCINEAFDIFIQMTSCGIRPNEITMVSLLRICAKAGSLEMGKWIHSYIDKQGIKED 878
Score = 84.0 bits (206), Expect = 3e-16
Identities = 37/103 (35%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L GKW H+++ K G D ++ T+L++MYA CG++ A+ +F+ + +D++ WN ++S
Sbjct: 860 LEMGKWIHSYIDKQGIKEDMILKTSLVNMYAKCGDIDAAHRLFDAVMDRDILMWNAMISG 919
Query: 193 YAQYGLIEDAFQLFINMQNTL-KPNESSLAGILPAVARSGTLH 318
+A +G E A +LF M+ + PN+ + G L A + SG LH
Sbjct: 920 FAMHGHGEAALKLFEKMEALMVVPNDITFIGALYACSHSGLLH 962
Score = 79.0 bits (193), Expect = 2e-14
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L +G+ H VV++GF SD + AL+ MY CG++ A VFE+M +D ISWN ++S
Sbjct: 226 LMRGREIHVHVVRNGFESDVDVLNALITMYVKCGDVSTARLVFEKMSNRDRISWNAMISG 285
Query: 193 YAQYGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGMELD 369
Y + G +LF+ M + + P+ ++ ++ A G L + H ++LR G D
Sbjct: 286 YFENGECLQGLRLFVMMIEYPVDPDLMTMISVITACELLGDERLGREIHGYVLRMGFGRD 345
Query: 370 EFV 378
V
Sbjct: 346 PSV 348
Score = 77.0 bits (188), Expect = 8e-14
Identities = 36/112 (32%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Frame = +1
Query: 22 GKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSCYAQ 201
G+ H +VVK+GF D + AL+ MY+ G L A +F+++ KD++SW+ ++ Y +
Sbjct: 558 GQELHGFVVKNGFHGDVFVCNALIMMYSEAGSLASARLLFDKIENKDIVSWSTMIRSYDR 617
Query: 202 YGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRN 354
GL +A LF +M ++P+E ++ I +A+ L K+ H +++RN
Sbjct: 618 SGLFNEALNLFRDMLVMGVRPSEIAMISITHVLAKLADLKTGKAMHGYVIRN 669
Score = 67.8 bits (164), Expect = 1e-10
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGF--ASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLV 186
L GK H +V+++ S +ST+L+DMY CG L A +F+ + +ISW ++
Sbjct: 656 LKTGKAMHGYVIRNVKYGKSGVSLSTSLIDMYVKCGNLAYAIRLFDGLSEASIISWTTMI 715
Query: 187 SCYAQYGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGME 363
+ Y + + +LF+ M + PN+ S+ ++ G L L K H+F LR+G
Sbjct: 716 AGYIHCNNLNEGVRLFVKMLDEGMFPNDISILSLVKECGTVGALELGKWLHAFTLRSGFT 775
Query: 364 L 366
+
Sbjct: 776 M 776
Score = 55.8 bits (133), Expect = 2e-06
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Frame = +1
Query: 22 GKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSCYAQ 201
G+ H +V++ GF D + +L+ MY++ G + A VF +D++SW ++S Y
Sbjct: 330 GREIHGYVLRMGFGRDPSVQNSLIQMYSSVGHIQEAETVFSRTEYRDVVSWTAMISGYEN 389
Query: 202 YGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGM 360
+ + A + + M+ + PNE ++A L A + L + H + G+
Sbjct: 390 CLMPQKALETYKIMEAEGVMPNEITIATALSACSGICKLDMGTDLHEAAKQTGL 443
>gb|EOA30113.1| hypothetical protein CARUB_v10013224mg [Capsella rubella]
Length = 623
Score = 102 bits (255), Expect = 7e-23
Identities = 48/124 (38%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
Frame = +1
Query: 4 LRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCL 183
LR + GK H+ V S FA+D + TAL+D YA CGEL +A +VF++M +D+++WN +
Sbjct: 85 LRAMEDGKLIHSHVTCSNFATDMYVCTALVDFYAKCGELDMALQVFDQMPKRDIVAWNAM 144
Query: 184 VSCYAQYGLIEDAFQLFINMQ--NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
+S ++ + + D LF+NM+ + L+PN S++ G+ PA+ R+G L K+ H + R G
Sbjct: 145 ISGFSLHCCLTDVIGLFLNMRRIDGLRPNLSTIVGMFPALGRAGALREGKAVHGYCTRIG 204
Query: 358 MELD 369
D
Sbjct: 205 FSND 208
Score = 73.9 bits (180), Expect = 9e-13
Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Frame = +1
Query: 34 HAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSCYAQYGLI 213
H + V G+A++T I AL+D+Y CG+L LA VF+ M +D++SWN ++ + +GL
Sbjct: 401 HGYCVVHGYAANTRICNALMDVYTKCGKLDLAKRVFDTMQNRDIVSWNTVLFGFGIHGLG 460
Query: 214 EDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSK 327
++A LF +M +T + P+E + IL A SG + K
Sbjct: 461 KEALSLFNSMHDTGVYPDEVTFLAILSACGHSGLVDEGK 499
Score = 67.4 bits (163), Expect = 2e-10
Identities = 36/116 (31%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L+ G+ H + VK+GF D + ++ YA G L A + F E+ KD++S+N L+S
Sbjct: 293 LNGGQCVHCYAVKAGFILDLTVGNTIISFYAKYGSLSDAFKQFGEIGLKDVVSYNSLISG 352
Query: 193 YAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
+ E++ LF +M+++ +KP+ ++L G+L A + L + SCH + + +G
Sbjct: 353 CVENCRSEESLCLFHDMKSSGMKPDITTLLGVLTACSHLAALGHASSCHGYCVVHG 408
Score = 60.1 bits (144), Expect = 7e-08
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L +GK H + + GF++D V T +LD+YA L A VF+ + K+ ++W+ ++
Sbjct: 190 LREGKAVHGYCTRIGFSNDLVFETGILDVYAKSKCLIYARRVFDSVSLKNEVTWSAMIGG 249
Query: 193 YAQYGLIEDAFQLFINM---QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGME 363
Y + + +A ++F+ M + ++ IL AR G L+ + H + ++ G
Sbjct: 250 YIENEKVTEAGEVFVQMLVNADVAMVTPVAIGLILMGCARFGDLNGGQCVHCYAVKAGFI 309
Query: 364 LD 369
LD
Sbjct: 310 LD 311
>ref|XP_023642083.1| pentatricopeptide repeat-containing protein At3g16610 [Capsella
rubella]
Length = 654
Score = 102 bits (255), Expect = 7e-23
Identities = 48/124 (38%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
Frame = +1
Query: 4 LRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCL 183
LR + GK H+ V S FA+D + TAL+D YA CGEL +A +VF++M +D+++WN +
Sbjct: 116 LRAMEDGKLIHSHVTCSNFATDMYVCTALVDFYAKCGELDMALQVFDQMPKRDIVAWNAM 175
Query: 184 VSCYAQYGLIEDAFQLFINMQ--NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
+S ++ + + D LF+NM+ + L+PN S++ G+ PA+ R+G L K+ H + R G
Sbjct: 176 ISGFSLHCCLTDVIGLFLNMRRIDGLRPNLSTIVGMFPALGRAGALREGKAVHGYCTRIG 235
Query: 358 MELD 369
D
Sbjct: 236 FSND 239
Score = 73.9 bits (180), Expect = 9e-13
Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Frame = +1
Query: 34 HAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSCYAQYGLI 213
H + V G+A++T I AL+D+Y CG+L LA VF+ M +D++SWN ++ + +GL
Sbjct: 432 HGYCVVHGYAANTRICNALMDVYTKCGKLDLAKRVFDTMQNRDIVSWNTVLFGFGIHGLG 491
Query: 214 EDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSK 327
++A LF +M +T + P+E + IL A SG + K
Sbjct: 492 KEALSLFNSMHDTGVYPDEVTFLAILSACGHSGLVDEGK 530
Score = 67.4 bits (163), Expect = 2e-10
Identities = 36/116 (31%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L+ G+ H + VK+GF D + ++ YA G L A + F E+ KD++S+N L+S
Sbjct: 324 LNGGQCVHCYAVKAGFILDLTVGNTIISFYAKYGSLSDAFKQFGEIGLKDVVSYNSLISG 383
Query: 193 YAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
+ E++ LF +M+++ +KP+ ++L G+L A + L + SCH + + +G
Sbjct: 384 CVENCRSEESLCLFHDMKSSGMKPDITTLLGVLTACSHLAALGHASSCHGYCVVHG 439
Score = 60.1 bits (144), Expect = 7e-08
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L +GK H + + GF++D V T +LD+YA L A VF+ + K+ ++W+ ++
Sbjct: 221 LREGKAVHGYCTRIGFSNDLVFETGILDVYAKSKCLIYARRVFDSVSLKNEVTWSAMIGG 280
Query: 193 YAQYGLIEDAFQLFINM---QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGME 363
Y + + +A ++F+ M + ++ IL AR G L+ + H + ++ G
Sbjct: 281 YIENEKVTEAGEVFVQMLVNADVAMVTPVAIGLILMGCARFGDLNGGQCVHCYAVKAGFI 340
Query: 364 LD 369
LD
Sbjct: 341 LD 342
>pdb|5IWW|D Chain D, Crystal structure of RNA editing factor of designer
PLS-type PPR/9R protein in complex with MORF9/RIP9
Length = 347
Score = 100 bits (248), Expect = 1e-22
Identities = 48/122 (39%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
+L L GK H +V+KSGF S+ V+ AL+DMY+ CG L A +VF+EM KD++++N
Sbjct: 165 RLGALELGKQIHGYVIKSGFESNVVVYNALIDMYSKCGLLEEARKVFDEMPEKDVVTYNT 224
Query: 181 LVSCYAQYGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
L+ + G +++A +LF M + +KP+E + + +L A AR G L L K H +++++G
Sbjct: 225 LIDGLCKAGKLDEALKLFEEMVEKGIKPDEFTFSSVLKACARLGALELGKQIHGYVIKSG 284
Query: 358 ME 363
E
Sbjct: 285 FE 286
Score = 98.6 bits (244), Expect = 5e-22
Identities = 47/122 (38%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
+L L GK H +V+KSGF + V+ AL+DMY+ CG L A +VF+EM KD++++N
Sbjct: 64 RLGALELGKQIHGYVIKSGFEGNVVVYNALIDMYSKCGLLEEARKVFDEMPEKDVVTYNT 123
Query: 181 LVSCYAQYGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
L+ + G +++A +LF M + +KP+E + + +L A AR G L L K H +++++G
Sbjct: 124 LIDGLCKAGKLDEALKLFEEMVEKGIKPDEFTFSSVLKACARLGALELGKQIHGYVIKSG 183
Query: 358 ME 363
E
Sbjct: 184 FE 185
Score = 60.8 bits (146), Expect = 3e-08
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
+L L GK H +V+KSGF S+ V+ AL+DMY+ CG L A +VF+EM KD +++
Sbjct: 266 RLGALELGKQIHGYVIKSGFESNVVVYNALIDMYSKCGLLEEARKVFDEMPEKDELTYRR 325
Query: 181 LVSCYAQ 201
+V Y +
Sbjct: 326 VVESYCR 332
>gb|POO03448.1| Tetratricopeptide-like helical domain containing protein [Trema
orientalis]
Length = 708
Score = 101 bits (252), Expect = 2e-22
Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
+L LHQGKWFH +V KSGF +V+ TALLDMY CG + A VF+E+ T D++SW
Sbjct: 258 KLGALHQGKWFHGYVSKSGFELSSVLGTALLDMYVKCGNMRDARYVFDELSTVDIVSWTA 317
Query: 181 LVSCYAQYGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
++ Y+Q G + A +LF + + L+PN + A +L + A+ L+L ++ H F ++ G
Sbjct: 318 MIVGYSQTGYPDKALKLFTDRKWIGLQPNPITAASLLSSCAQLSNLNLGRAIHGFGVKLG 377
Query: 358 ME 363
+E
Sbjct: 378 LE 379
Score = 79.7 bits (195), Expect = 9e-15
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
QL L+ G+ H + VK G D+V+ AL+DMYA C LG A VFE + K++I+WN
Sbjct: 359 QLSNLNLGRAIHGFGVKLGL-EDSVVRNALVDMYAKCRMLGDARYVFETVLDKNVIAWNS 417
Query: 181 LVSCYAQYGLIEDAFQLFINMQN-TLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
++S Y+Q +A Q+F M++ +L P+ +L +L A A G L + S H++ ++ G
Sbjct: 418 IISGYSQNWCAYEALQMFHRMRSESLLPDAITLVSVLSACAFIGALRVGSSLHAYSIKGG 477
Query: 358 M 360
+
Sbjct: 478 L 478
Score = 71.2 bits (173), Expect = 8e-12
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
+LR + +G+ H K G D+ + T L+DMYA CG + + VF+ ++ +D++ W
Sbjct: 158 ELRDIDEGRKVHCKTEKVG-NPDSFVLTGLVDMYAKCGRIECSRSVFDGINDRDVVPWTT 216
Query: 181 LVSCYAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
++ Y ++ LF M+ + +K NE +L ++ A + G LH K H ++ ++G
Sbjct: 217 MIVGYVHNDCAKEGLALFNRMRESFVKGNEFTLGSLITACTKLGALHQGKWFHGYVSKSG 276
Query: 358 MEL 366
EL
Sbjct: 277 FEL 279
Score = 63.5 bits (153), Expect = 4e-09
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVI-STALLDMYANCGELGLANEVFEEMHTKDLISWNCLVS 189
L G HA+ +K G ++ VI TALL+ YA G+ A VF EM K+ I+W+ ++
Sbjct: 463 LRVGSSLHAYSIKGGLITNNVIVGTALLNFYAKSGDAKSARIVFNEMKEKNSITWSTMIG 522
Query: 190 CYAQYGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSG 309
Y G ++F LF M ++ L+PNE +L A + SG
Sbjct: 523 GYGMQGDNGESFTLFDEMLKDDLQPNEEIFTAVLSACSHSG 563
>ref|XP_015059067.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial [Solanum pennellii]
Length = 760
Score = 101 bits (252), Expect = 2e-22
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
Q+ L +G+ H ++ + GF ++T++ TAL DMYA CG+L + E+F+ M KD++SWN
Sbjct: 530 QVSSLEKGEKVHQYIKEVGFGNNTLLDTALTDMYAKCGQLTKSREIFDSMEKKDIVSWNV 589
Query: 181 LVSCYAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHS 339
L+S YA YG DA ++F NM+ T +KPNE + +L A A +G + KS S
Sbjct: 590 LISGYAMYGEANDAIEMFKNMEQTEIKPNELTFLAVLSACAHAGLVEEGKSIFS 643
Score = 67.8 bits (164), Expect = 1e-10
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L +GK FH +K+GF V+ +++L MY+ CG + F E+ KDL SW ++
Sbjct: 232 LVEGKCFHGLAMKTGFGYHQVVQSSVLLMYSKCGSVEETYRSFCEVDEKDLFSWTVVIGV 291
Query: 193 YAQYGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGME 363
YA+Y I + +F+ M + + P+ ++ +L + + +K+ H FILR +
Sbjct: 292 YAKYECIGECVDMFLRMLASGITPDGMVISCVLSGLGNVAMILEAKTFHGFILRRNYD 349
Score = 60.5 bits (145), Expect = 5e-08
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
+L G+ H +K+ + ++ +L+DMY L L+ VF M KD+++WN
Sbjct: 429 RLEKFRLGESLHCHFIKNLMLGNVSVANSLIDMYGRRKNLTLSWRVFCMMTDKDVVTWNT 488
Query: 181 LVSCYAQYGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
+++ Y G I +AF LF M+ + KPN ++L +L A ++ +L + H +I G
Sbjct: 489 MMTSYISCGNIAEAFGLFDEMRAESYKPNIATLVILLSASSQVSSLEKGEKVHQYIKEVG 548
Score = 57.0 bits (136), Expect = 8e-07
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSG-FASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWN 177
+L L+ G H V+K F ++ + +L+ MY+ CG +G A +VF+E+ +D++SW
Sbjct: 123 ELGLVEIGMGVHGVVLKLNLFDGNSAVGASLVYMYSKCGVMGYACDVFDEIPVRDVVSWT 182
Query: 178 CLVSCYAQYGLIEDAFQLFINM----QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFI 345
+V + G + F M + ++PN +L G A G+L K H
Sbjct: 183 AIVKGCVENGESGKGLEYFCLMCKDGEGEVRPNFRTLEGGFQACGNLGSLVEGKCFHGLA 242
Query: 346 LRNGMELDEFV 378
++ G + V
Sbjct: 243 MKTGFGYHQVV 253
>ref|XP_004250511.2| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial [Solanum lycopersicum]
Length = 761
Score = 101 bits (252), Expect = 2e-22
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
Q+ L +G+ H ++ + GF ++T++ TAL DMYA CG+L + E+F+ M KD++SWN
Sbjct: 531 QVSSLEKGEKVHQYIKEVGFGNNTLLDTALTDMYAKCGQLTKSREIFDSMEKKDIVSWNV 590
Query: 181 LVSCYAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHS 339
L+S YA YG DA ++F NM+ T +KPNE + +L A A +G + KS S
Sbjct: 591 LISGYAMYGEANDAIEMFKNMEQTEIKPNELTFLAVLSACAHAGLVEEGKSIFS 644
Score = 69.7 bits (169), Expect = 3e-11
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = +1
Query: 4 LRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCL 183
L L +GK FH +K+GF V+ +++L MY+ CG + F E+ KDL SW +
Sbjct: 229 LGALVEGKCFHGLGMKTGFGYHQVVQSSVLLMYSKCGSVEETYRSFCEVDEKDLFSWTVV 288
Query: 184 VSCYAQYGLIEDAFQLFINM-QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGM 360
+ YA+Y I + +F+ M + + P+ ++ +L + + +K+ H FILR
Sbjct: 289 IGVYAKYECIGECVDMFLRMLASGITPDGMVISCVLSGLGNVAMILEAKTFHGFILRRNY 348
Query: 361 ELDEFV 378
+ D V
Sbjct: 349 DEDHMV 354
Score = 62.0 bits (149), Expect = 1e-08
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNC 180
+L G+ H ++K+ + ++ +L+DMY L L+ VF M KD+++WN
Sbjct: 430 RLEKFRLGESLHCHIIKNLMLGNVSVANSLIDMYGRRKNLTLSWRVFCMMTDKDVVTWNT 489
Query: 181 LVSCYAQYGLIEDAFQLFINMQ-NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
+++ Y G I +AF LF M+ + KPN ++L +L A ++ +L + H +I G
Sbjct: 490 MMTSYISCGNIAEAFGLFDEMRAESYKPNIATLVILLSASSQVSSLEKGEKVHQYIKEVG 549
Score = 57.4 bits (137), Expect = 6e-07
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Frame = +1
Query: 1 QLRLLHQGKWFHAWVVKSG-FASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWN 177
+L L+ G H V+K F ++ + +L+ MY+ CG +G A +VF+EM +D++SW
Sbjct: 123 ELGLVEIGMGVHGLVLKLNLFDGNSAVGASLVYMYSKCGVMGYACDVFDEMPVRDVVSWT 182
Query: 178 CLVSCYAQYGLIEDAFQLFI----NMQNTLKPNESSLAGILPAVARSGTLHLSKSCHSFI 345
++ + G + F N + ++PN +L G A G L K H
Sbjct: 183 AIIKGCVENGESGKGLEYFCLMCKNGEGEVRPNFRTLEGGFQACGNLGALVEGKCFHGLG 242
Query: 346 LRNGMELDEFV 378
++ G + V
Sbjct: 243 MKTGFGYHQVV 253
Score = 57.0 bits (136), Expect = 8e-07
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Frame = +1
Query: 10 LLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVS 189
++ + K FH ++++ + D ++ ALL MY L LA ++F + ++ +WN +
Sbjct: 332 MILEAKTFHGFILRRNYDEDHMVGNALLAMYCKLRLLNLAEKIFNGGNEQNTEAWNVMTI 391
Query: 190 CYAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGM 360
Y + GL + LF +MQ ++ + +SL ++ + +R L +S H I++N M
Sbjct: 392 GYWKAGLEANCIDLFRDMQYLGMESDVNSLISVISSCSRLEKFRLGESLHCHIIKNLM 449
Score = 53.9 bits (128), Expect = 9e-06
Identities = 26/108 (24%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +1
Query: 34 HAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSCYAQYGLI 213
HA+++ +G + I+ L+ +YA+ +L + +VF+ ++ KD WN ++ Y G
Sbjct: 33 HAFIITTGHTQNVYIAAKLISLYASNNDLISSRKVFDFINFKDPFLWNSIIKAYFSNGKY 92
Query: 214 EDAFQLFINMQ--NTLKPNESSLAGILPAVARSGTLHLSKSCHSFILR 351
++ + + M+ N L PN+ ++ ++ A A G + + H +L+
Sbjct: 93 TESLEFYSGMRCFNAL-PNQFTIPMVVSACAELGLVEIGMGVHGLVLK 139
>ref|XP_002885157.1| pentatricopeptide repeat-containing protein At3g16610 isoform X1
[Arabidopsis lyrata subsp. lyrata]
gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 101 bits (251), Expect = 2e-22
Identities = 48/124 (38%), Positives = 77/124 (62%), Gaps = 2/124 (1%)
Frame = +1
Query: 4 LRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCL 183
LR + GK H+ V S FA+D + TAL+D YA CGEL +A +VF+EM +D+++WN +
Sbjct: 116 LRAIEDGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAM 175
Query: 184 VSCYAQYGLIEDAFQLFINMQNT--LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
+S ++ + + D LF++M+ + L PN S++ G+ PA+ R+G L K+ H + R G
Sbjct: 176 ISGFSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMG 235
Query: 358 MELD 369
D
Sbjct: 236 FSND 239
Score = 83.2 bits (204), Expect = 5e-16
Identities = 44/117 (37%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = +1
Query: 4 LRLLHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCL 183
L L G H + V +G+A +T I AL+DMY CG+L +A VF+ MH +D++SWN +
Sbjct: 422 LAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTM 481
Query: 184 VSCYAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILR 351
+ + +GL ++A LF +MQ+T + P+E +L IL A + SG + K + + R
Sbjct: 482 LFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSR 538
Score = 70.1 bits (170), Expect = 2e-11
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L G+ H + +K+GF D + ++ YA G L A F E+ KD++S+N L+S
Sbjct: 324 LSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISG 383
Query: 193 YAQYGLIEDAFQLFINMQNT-LKPNESSLAGILPAVARSGTLHLSKSCHSFILRNG 357
+ E++F+LF M+++ ++P+ ++L GIL A + L SCH + + NG
Sbjct: 384 CVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNG 439
Score = 61.6 bits (148), Expect = 2e-08
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Frame = +1
Query: 13 LHQGKWFHAWVVKSGFASDTVISTALLDMYANCGELGLANEVFEEMHTKDLISWNCLVSC 192
L +GK H + + GF++D V+ T +LD+YA + A VF+ K+ ++W+ ++
Sbjct: 221 LREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGG 280
Query: 193 YAQYGLIEDAFQLFINM---QNTLKPNESSLAGILPAVARSGTLHLSKSCHSFILRNGME 363
Y + +I++A ++F+ M + ++ IL AR G L + H + ++ G
Sbjct: 281 YVENEMIKEAGEVFLQMLVNADMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFI 340
Query: 364 LD 369
LD
Sbjct: 341 LD 342