BLASTX nr result

ID: Ophiopogon23_contig00008998 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00008998
         (599 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020693430.1| cleavage stimulating factor 64 [Dendrobium c...    59   8e-07
ref|XP_009420568.1| PREDICTED: cleavage stimulating factor 64 [M...    59   1e-06
gb|OVA08104.1| RNA recognition motif domain [Macleaya cordata]         59   1e-06
ref|XP_018683706.1| PREDICTED: cleavage stimulating factor 64 is...    58   2e-06
ref|XP_009404875.1| PREDICTED: cleavage stimulating factor 64 is...    58   2e-06
ref|XP_009404874.1| PREDICTED: cleavage stimulating factor 64 is...    58   2e-06
ref|XP_020107048.1| cleavage stimulating factor 64 isoform X2 [A...    57   5e-06
ref|XP_009404877.1| PREDICTED: cleavage stimulating factor 64 is...    57   5e-06
ref|XP_010930797.1| PREDICTED: cleavage stimulating factor 64 is...    57   6e-06
ref|XP_010930796.1| PREDICTED: cleavage stimulating factor 64 is...    57   6e-06

>ref|XP_020693430.1| cleavage stimulating factor 64 [Dendrobium catenatum]
 gb|PKU70543.1| 28 kDa ribonucleoprotein, chloroplastic [Dendrobium catenatum]
          Length = 569

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 28/42 (66%), Positives = 35/42 (83%)
 Frame = +1

Query: 13  GSQIANADGLQHTEKQIPLLPPEVDPALLQQVMNLAPEQLSS 138
           G QI+NADGLQHT+KQ+P L  E + ALL+Q+M+L PEQLSS
Sbjct: 506 GKQISNADGLQHTQKQMPQLSAEEETALLKQLMSLTPEQLSS 547


>ref|XP_009420568.1| PREDICTED: cleavage stimulating factor 64 [Musa acuminata subsp.
           malaccensis]
          Length = 534

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 28/46 (60%), Positives = 35/46 (76%)
 Frame = +1

Query: 1   GPVPGSQIANADGLQHTEKQIPLLPPEVDPALLQQVMNLAPEQLSS 138
           G V GSQ    D + H+EKQ+P +PPEV+ ALLQQV++L PEQLSS
Sbjct: 469 GTVAGSQTIVTDSVGHSEKQMPQIPPEVESALLQQVLSLTPEQLSS 514


>gb|OVA08104.1| RNA recognition motif domain [Macleaya cordata]
          Length = 567

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 26/46 (56%), Positives = 38/46 (82%)
 Frame = +1

Query: 1   GPVPGSQIANADGLQHTEKQIPLLPPEVDPALLQQVMNLAPEQLSS 138
           G  P ++I++++G+Q+ EKQ+P L P+V+ ALLQQVM+L PEQLSS
Sbjct: 503 GSSPANRISSSEGMQYPEKQVPQLAPDVESALLQQVMSLTPEQLSS 548


>ref|XP_018683706.1| PREDICTED: cleavage stimulating factor 64 isoform X4 [Musa
           acuminata subsp. malaccensis]
          Length = 406

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +1

Query: 1   GPVPGSQIANADGLQHTEKQIPLLPPEVDPALLQQVMNLAPEQLSS 138
           G V GSQ+   D +QH++KQ+P L PEV+ ALLQQV++L PEQLSS
Sbjct: 339 GIVAGSQMVVGDAVQHSKKQMPQLSPEVESALLQQVLSLTPEQLSS 384


>ref|XP_009404875.1| PREDICTED: cleavage stimulating factor 64 isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 535

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +1

Query: 1   GPVPGSQIANADGLQHTEKQIPLLPPEVDPALLQQVMNLAPEQLSS 138
           G V GSQ+   D +QH++KQ+P L PEV+ ALLQQV++L PEQLSS
Sbjct: 468 GIVAGSQMVVGDAVQHSKKQMPQLSPEVESALLQQVLSLTPEQLSS 513


>ref|XP_009404874.1| PREDICTED: cleavage stimulating factor 64 isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 547

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +1

Query: 1   GPVPGSQIANADGLQHTEKQIPLLPPEVDPALLQQVMNLAPEQLSS 138
           G V GSQ+   D +QH++KQ+P L PEV+ ALLQQV++L PEQLSS
Sbjct: 480 GIVAGSQMVVGDAVQHSKKQMPQLSPEVESALLQQVLSLTPEQLSS 525


>ref|XP_020107048.1| cleavage stimulating factor 64 isoform X2 [Ananas comosus]
 gb|OAY79397.1| Cleavage stimulating factor 64 [Ananas comosus]
          Length = 498

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = +1

Query: 1   GPVPGSQIANADGLQHTEKQIPLLPPEVDPALLQQVMNLAPEQLSS 138
           G V GSQ+AN+D +   E+Q+  + PEV+ ALLQQV+NL PEQLSS
Sbjct: 433 GAVSGSQVANSDSMPQPERQMLQIAPEVESALLQQVLNLTPEQLSS 478


>ref|XP_009404877.1| PREDICTED: cleavage stimulating factor 64 isoform X3 [Musa
           acuminata subsp. malaccensis]
          Length = 503

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = +1

Query: 7   VPGSQIANADGLQHTEKQIPLLPPEVDPALLQQVMNLAPEQLSS 138
           V GSQ+   D +QH++KQ+P L PEV+ ALLQQV++L PEQLSS
Sbjct: 438 VAGSQMVVGDAVQHSKKQMPQLSPEVESALLQQVLSLTPEQLSS 481


>ref|XP_010930797.1| PREDICTED: cleavage stimulating factor 64 isoform X2 [Elaeis
           guineensis]
          Length = 549

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = +1

Query: 16  SQIANADGLQHTEKQIPLLPPEVDPALLQQVMNLAPEQLSS 138
           SQ+   DGLQH++KQ+P L PEV+  LLQQV++L PEQLSS
Sbjct: 489 SQMIGVDGLQHSQKQMPQLTPEVESVLLQQVLSLTPEQLSS 529


>ref|XP_010930796.1| PREDICTED: cleavage stimulating factor 64 isoform X1 [Elaeis
           guineensis]
          Length = 551

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = +1

Query: 16  SQIANADGLQHTEKQIPLLPPEVDPALLQQVMNLAPEQLSS 138
           SQ+   DGLQH++KQ+P L PEV+  LLQQV++L PEQLSS
Sbjct: 491 SQMIGVDGLQHSQKQMPQLTPEVESVLLQQVLSLTPEQLSS 531


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