BLASTX nr result

ID: Ophiopogon23_contig00008915 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00008915
         (356 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020274321.1| translocase of chloroplast 159, chloroplasti...    94   5e-20
ref|XP_020275781.1| translocase of chloroplast 159, chloroplasti...    83   4e-16
gb|ONK62964.1| uncharacterized protein A4U43_C07F9950 [Asparagus...    76   1e-13

>ref|XP_020274321.1| translocase of chloroplast 159, chloroplastic-like [Asparagus
           officinalis]
          Length = 1356

 Score = 94.4 bits (233), Expect = 5e-20
 Identities = 63/141 (44%), Positives = 73/141 (51%), Gaps = 23/141 (16%)
 Frame = -1

Query: 356 QRSLDPETVEEKPAFNSGRVSTDLEAKPGDGGGDFNPHLDVKPS---------------- 225
           Q S+D +T EEK    S +VSTDLEAKP DGG D + H DV+PS                
Sbjct: 379 QGSIDLKTEEEKGVSTSDQVSTDLEAKPSDGGRDLDLHKDVEPSPAPVEDSKSKETEIQP 438

Query: 224 -------EGGTACEISVEGMLPASAPVEKAEPDAEVSHVXXXXXXXXXXXXXXXXXXXXN 66
                  E GT+CEISV  +LP S   EK EP+    HV                    +
Sbjct: 439 LENSGITESGTSCEISVGSVLPVSVHGEKVEPENNGLHV-DDDDENPIQNEAEEEEEDGD 497

Query: 65  VSDQQPRVAILDSSETAKQII 3
           V+DQQPRVAILDSSETAKQII
Sbjct: 498 VTDQQPRVAILDSSETAKQII 518


>ref|XP_020275781.1| translocase of chloroplast 159, chloroplastic-like [Asparagus
           officinalis]
 gb|ONK62963.1| uncharacterized protein A4U43_C07F9940 [Asparagus officinalis]
          Length = 1343

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 60/142 (42%), Positives = 71/142 (50%), Gaps = 24/142 (16%)
 Frame = -1

Query: 356 QRSLDPETVEEKPAFNSGRVSTDLEAKPGDGGGDFNPHLDVKP----------------- 228
           +RSLD  T  EK  F S +V TDLEAKP DGGGD +   DV+P                 
Sbjct: 367 ERSLDLNTEVEKGVFTSHQVLTDLEAKPRDGGGDADLRQDVEPPPAPAEDSKSKETEIQS 426

Query: 227 ------SEGGTACEISVEGMLPA-SAPVEKAEPDAEVSHVXXXXXXXXXXXXXXXXXXXX 69
                 +E G+ACEIS    LP      EK EP+++  HV                    
Sbjct: 427 LENSSVTESGSACEISAGSTLPVYVVHGEKVEPESDGPHV---ADDDENLVQAGEEVEDD 483

Query: 68  NVSDQQPRVAILDSSETAKQII 3
           NVSD+QPRVAILDSSETAKQ+I
Sbjct: 484 NVSDEQPRVAILDSSETAKQLI 505


>gb|ONK62964.1| uncharacterized protein A4U43_C07F9950 [Asparagus officinalis]
          Length = 1321

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 52/118 (44%), Positives = 63/118 (53%)
 Frame = -1

Query: 356 QRSLDPETVEEKPAFNSGRVSTDLEAKPGDGGGDFNPHLDVKPSEGGTACEISVEGMLPA 177
           Q S+D +T EEK    S +VSTDLEAKP DGG D + H DV+PS        S E  +  
Sbjct: 379 QGSIDLKTEEEKGVSTSDQVSTDLEAKPSDGGRDLDLHKDVEPSPAPVEDSKSKETEI-- 436

Query: 176 SAPVEKAEPDAEVSHVXXXXXXXXXXXXXXXXXXXXNVSDQQPRVAILDSSETAKQII 3
             P+E ++ D E                        +V+DQQPRVAILDSSETAKQII
Sbjct: 437 -QPLENSDDDDE----------NPIQNEAEEEEEDGDVTDQQPRVAILDSSETAKQII 483


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