BLASTX nr result
ID: Ophiopogon23_contig00008546
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00008546
(729 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020677886.1| RNA polymerase II transcription factor B sub... 132 2e-36
ref|XP_008791280.1| PREDICTED: RNA polymerase II transcription f... 130 9e-36
ref|XP_020593716.1| RNA polymerase II transcription factor B sub... 128 8e-35
gb|KQK08060.1| hypothetical protein BRADI_2g39330v3, partial [Br... 129 2e-34
ref|XP_010231853.1| PREDICTED: general transcription factor IIH ... 127 2e-34
ref|XP_006477302.1| PREDICTED: general transcription factor IIH ... 126 4e-34
gb|PAN16818.1| hypothetical protein PAHAL_C01026 [Panicum hallii] 127 5e-34
ref|XP_020244265.1| RNA polymerase II transcription factor B sub... 126 6e-34
dbj|BAK07005.1| predicted protein, partial [Hordeum vulgare subs... 124 2e-33
ref|XP_002266482.1| PREDICTED: RNA polymerase II transcription f... 124 5e-33
gb|KQL13406.1| hypothetical protein SETIT_023901mg [Setaria ital... 123 7e-33
ref|XP_020156669.1| RNA polymerase II transcription factor B sub... 123 7e-33
ref|XP_020111141.1| RNA polymerase II transcription factor B sub... 123 1e-32
ref|XP_002440981.1| RNA polymerase II transcription factor B sub... 123 1e-32
gb|PAN19933.1| hypothetical protein PAHAL_C03260 [Panicum hallii] 122 1e-32
ref|XP_021635503.1| RNA polymerase II transcription factor B sub... 122 1e-32
ref|XP_010533744.1| PREDICTED: RNA polymerase II transcription f... 122 1e-32
ref|XP_015645359.1| PREDICTED: general transcription factor IIH ... 124 2e-32
ref|XP_015584007.1| PREDICTED: general transcription factor IIH ... 122 3e-32
ref|XP_021669359.1| RNA polymerase II transcription factor B sub... 121 4e-32
>ref|XP_020677886.1| RNA polymerase II transcription factor B subunit 5-like [Dendrobium
catenatum]
ref|XP_020677887.1| RNA polymerase II transcription factor B subunit 5-like [Dendrobium
catenatum]
gb|PKU74163.1| hypothetical protein MA16_Dca020139 [Dendrobium catenatum]
Length = 70
Score = 132 bits (332), Expect = 2e-36
Identities = 64/70 (91%), Positives = 68/70 (97%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNAIKGIFISCD+PMAQFI+NMNASLPASQ+FIVHILDSTHMFVQP V EMIRSKIAEF
Sbjct: 1 MVNAIKGIFISCDVPMAQFIVNMNASLPASQKFIVHILDSTHMFVQPHVVEMIRSKIAEF 60
Query: 147 RDQNTYEKPA 118
R+QNTYEKPA
Sbjct: 61 REQNTYEKPA 70
>ref|XP_008791280.1| PREDICTED: RNA polymerase II transcription factor B subunit 5
[Phoenix dactylifera]
Length = 70
Score = 130 bits (328), Expect = 9e-36
Identities = 62/70 (88%), Positives = 67/70 (95%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNAIKG+ ISCD+PMAQFI+N+NASLPASQRFIVH+LDSTHMFVQP V EMIRSKIAEF
Sbjct: 1 MVNAIKGLLISCDVPMAQFIVNLNASLPASQRFIVHMLDSTHMFVQPHVAEMIRSKIAEF 60
Query: 147 RDQNTYEKPA 118
RDQNTYEKPA
Sbjct: 61 RDQNTYEKPA 70
>ref|XP_020593716.1| RNA polymerase II transcription factor B subunit 5 [Phalaenopsis
equestris]
ref|XP_020593717.1| RNA polymerase II transcription factor B subunit 5 [Phalaenopsis
equestris]
Length = 70
Score = 128 bits (322), Expect = 8e-35
Identities = 60/70 (85%), Positives = 66/70 (94%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNAIKGI ISCD+PMAQFI+N+NA+LPASQ+FIVH+LD THMFVQP V EMIRSKIAEF
Sbjct: 1 MVNAIKGILISCDVPMAQFIVNLNAALPASQKFIVHVLDGTHMFVQPHVAEMIRSKIAEF 60
Query: 147 RDQNTYEKPA 118
RDQNTYEKPA
Sbjct: 61 RDQNTYEKPA 70
>gb|KQK08060.1| hypothetical protein BRADI_2g39330v3, partial [Brachypodium
distachyon]
Length = 121
Score = 129 bits (324), Expect = 2e-34
Identities = 59/70 (84%), Positives = 68/70 (97%)
Frame = -1
Query: 330 KMVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAE 151
KMVNAIKG+FISCD+PMAQFI+N+NAS+PAS++FIVH+LD THMFVQP VGEMIRSKIAE
Sbjct: 51 KMVNAIKGLFISCDVPMAQFIVNLNASMPASEKFIVHMLDPTHMFVQPHVGEMIRSKIAE 110
Query: 150 FRDQNTYEKP 121
FRDQN+YEKP
Sbjct: 111 FRDQNSYEKP 120
>ref|XP_010231853.1| PREDICTED: general transcription factor IIH subunit 5 [Brachypodium
distachyon]
Length = 70
Score = 127 bits (319), Expect = 2e-34
Identities = 58/69 (84%), Positives = 67/69 (97%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNAIKG+FISCD+PMAQFI+N+NAS+PAS++FIVH+LD THMFVQP VGEMIRSKIAEF
Sbjct: 1 MVNAIKGLFISCDVPMAQFIVNLNASMPASEKFIVHMLDPTHMFVQPHVGEMIRSKIAEF 60
Query: 147 RDQNTYEKP 121
RDQN+YEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_006477302.1| PREDICTED: general transcription factor IIH subunit 5 [Citrus
sinensis]
ref|XP_006477303.1| PREDICTED: general transcription factor IIH subunit 5 [Citrus
sinensis]
ref|XP_006477304.1| PREDICTED: general transcription factor IIH subunit 5 [Citrus
sinensis]
ref|XP_024044255.1| general transcription and DNA repair factor IIH subunit TFB5
[Citrus clementina]
ref|XP_024044256.1| general transcription and DNA repair factor IIH subunit TFB5
[Citrus clementina]
gb|KDO63733.1| hypothetical protein CISIN_1g0351902mg [Citrus sinensis]
gb|KDO63734.1| hypothetical protein CISIN_1g0351902mg [Citrus sinensis]
gb|KDO63735.1| hypothetical protein CISIN_1g0351902mg [Citrus sinensis]
dbj|GAY43430.1| hypothetical protein CUMW_074400 [Citrus unshiu]
dbj|GAY43431.1| hypothetical protein CUMW_074400 [Citrus unshiu]
dbj|GAY43432.1| hypothetical protein CUMW_074410 [Citrus unshiu]
Length = 70
Score = 126 bits (317), Expect = 4e-34
Identities = 59/70 (84%), Positives = 66/70 (94%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNAIKG+FISCDIPMAQFIINMNAS+P SQ+FI+HILDSTH+FVQP + EMIRS IAEF
Sbjct: 1 MVNAIKGLFISCDIPMAQFIINMNASMPQSQKFIIHILDSTHLFVQPNMAEMIRSAIAEF 60
Query: 147 RDQNTYEKPA 118
RDQN+YEKPA
Sbjct: 61 RDQNSYEKPA 70
>gb|PAN16818.1| hypothetical protein PAHAL_C01026 [Panicum hallii]
Length = 85
Score = 127 bits (318), Expect = 5e-34
Identities = 59/70 (84%), Positives = 66/70 (94%)
Frame = -1
Query: 330 KMVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAE 151
KMVNAIKG+FISCDIPMAQFI+N+NAS+PAS+RFIVH+LD THMFVQP V EMIRSKI E
Sbjct: 15 KMVNAIKGLFISCDIPMAQFIVNLNASMPASERFIVHMLDPTHMFVQPHVAEMIRSKIGE 74
Query: 150 FRDQNTYEKP 121
FRDQN+YEKP
Sbjct: 75 FRDQNSYEKP 84
>ref|XP_020244265.1| RNA polymerase II transcription factor B subunit 5 isoform X1
[Asparagus officinalis]
ref|XP_020244272.1| RNA polymerase II transcription factor B subunit 5 isoform X1
[Asparagus officinalis]
ref|XP_020244279.1| RNA polymerase II transcription factor B subunit 5 isoform X1
[Asparagus officinalis]
gb|ONK80044.1| uncharacterized protein A4U43_C01F13170 [Asparagus officinalis]
Length = 70
Score = 126 bits (316), Expect = 6e-34
Identities = 59/70 (84%), Positives = 67/70 (95%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNAIKG+FISCD+PMAQ IINMN+SLPASQ+FIVH+LDSTHMFVQP V EMI++KIAE+
Sbjct: 1 MVNAIKGLFISCDVPMAQLIINMNSSLPASQKFIVHMLDSTHMFVQPHVAEMIQTKIAEY 60
Query: 147 RDQNTYEKPA 118
RDQNTYEKPA
Sbjct: 61 RDQNTYEKPA 70
>dbj|BAK07005.1| predicted protein, partial [Hordeum vulgare subsp. vulgare]
Length = 71
Score = 124 bits (312), Expect = 2e-33
Identities = 56/70 (80%), Positives = 66/70 (94%)
Frame = -1
Query: 330 KMVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAE 151
KMVNAIKG+FISCDIPMAQFI+NMNAS+PAS +FIVHILD THMF+QP +G+ I+SK+AE
Sbjct: 1 KMVNAIKGLFISCDIPMAQFIVNMNASMPASDKFIVHILDPTHMFIQPNMGDYIKSKMAE 60
Query: 150 FRDQNTYEKP 121
FRDQN+YEKP
Sbjct: 61 FRDQNSYEKP 70
>ref|XP_002266482.1| PREDICTED: RNA polymerase II transcription factor B subunit 5
[Vitis vinifera]
ref|XP_010661766.1| PREDICTED: RNA polymerase II transcription factor B subunit 5
[Vitis vinifera]
ref|XP_019081172.1| PREDICTED: RNA polymerase II transcription factor B subunit 5
[Vitis vinifera]
emb|CBI34818.3| unnamed protein product, partial [Vitis vinifera]
Length = 70
Score = 124 bits (310), Expect = 5e-33
Identities = 57/70 (81%), Positives = 66/70 (94%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNA KG+FISCDIPMAQFIINMNAS+PASQ+FI+H+LDSTH+FVQP V EMIRS I+EF
Sbjct: 1 MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEF 60
Query: 147 RDQNTYEKPA 118
R+QN+YEKPA
Sbjct: 61 REQNSYEKPA 70
>gb|KQL13406.1| hypothetical protein SETIT_023901mg [Setaria italica]
Length = 70
Score = 123 bits (309), Expect = 7e-33
Identities = 58/69 (84%), Positives = 64/69 (92%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNAIKG+FISCDIPMAQFIIN+NAS+P S+RFIVH+LD THMFVQP V EMIRSKI EF
Sbjct: 1 MVNAIKGLFISCDIPMAQFIINLNASMPPSERFIVHMLDPTHMFVQPHVAEMIRSKIGEF 60
Query: 147 RDQNTYEKP 121
RDQN+YEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_020156669.1| RNA polymerase II transcription factor B subunit 5-like [Aegilops
tauschii subsp. tauschii]
Length = 70
Score = 123 bits (309), Expect = 7e-33
Identities = 55/69 (79%), Positives = 66/69 (95%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNAIKG+FISCDIPMAQFI+NMNAS+PAS++FIVHILD THMF+QP +G+ I+SK+AEF
Sbjct: 1 MVNAIKGLFISCDIPMAQFIVNMNASMPASEKFIVHILDPTHMFIQPNMGDYIKSKMAEF 60
Query: 147 RDQNTYEKP 121
RDQN+YEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_020111141.1| RNA polymerase II transcription factor B subunit 5 [Ananas comosus]
ref|XP_020111142.1| RNA polymerase II transcription factor B subunit 5 [Ananas comosus]
ref|XP_020111144.1| RNA polymerase II transcription factor B subunit 5 [Ananas comosus]
Length = 70
Score = 123 bits (308), Expect = 1e-32
Identities = 57/70 (81%), Positives = 66/70 (94%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNAIKG+FISCDIPMAQFI+N+N S+P S++FIVH+LDSTH+FVQP V EMIRSKIAEF
Sbjct: 1 MVNAIKGLFISCDIPMAQFIVNLNNSMPPSEKFIVHMLDSTHIFVQPHVAEMIRSKIAEF 60
Query: 147 RDQNTYEKPA 118
RDQN+YEKPA
Sbjct: 61 RDQNSYEKPA 70
>ref|XP_002440981.1| RNA polymerase II transcription factor B subunit 5 [Sorghum
bicolor]
gb|EES19411.1| hypothetical protein SORBI_3009G115800 [Sorghum bicolor]
Length = 70
Score = 123 bits (308), Expect = 1e-32
Identities = 57/69 (82%), Positives = 65/69 (94%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNAIKG+FISCD+PMAQFI+N+NAS+PAS+RFIVH+LD THMFVQP V EMIRSKIAEF
Sbjct: 1 MVNAIKGLFISCDVPMAQFIVNLNASMPASERFIVHMLDPTHMFVQPHVAEMIRSKIAEF 60
Query: 147 RDQNTYEKP 121
DQN+YEKP
Sbjct: 61 WDQNSYEKP 69
>gb|PAN19933.1| hypothetical protein PAHAL_C03260 [Panicum hallii]
Length = 70
Score = 122 bits (307), Expect = 1e-32
Identities = 56/69 (81%), Positives = 65/69 (94%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNAIKG+FISCD+PMAQFI+N+NAS+PAS++FIVH+LD THMFV P V EMIRSKIAEF
Sbjct: 1 MVNAIKGLFISCDVPMAQFIVNLNASMPASEQFIVHMLDPTHMFVHPHVAEMIRSKIAEF 60
Query: 147 RDQNTYEKP 121
RDQN+YEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_021635503.1| RNA polymerase II transcription factor B subunit 5-like [Hevea
brasiliensis]
ref|XP_021635504.1| RNA polymerase II transcription factor B subunit 5-like [Hevea
brasiliensis]
ref|XP_021635505.1| RNA polymerase II transcription factor B subunit 5-like [Hevea
brasiliensis]
ref|XP_021635506.1| RNA polymerase II transcription factor B subunit 5-like [Hevea
brasiliensis]
ref|XP_021635507.1| RNA polymerase II transcription factor B subunit 5-like [Hevea
brasiliensis]
ref|XP_021635508.1| RNA polymerase II transcription factor B subunit 5-like [Hevea
brasiliensis]
Length = 70
Score = 122 bits (307), Expect = 1e-32
Identities = 56/69 (81%), Positives = 65/69 (94%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNA KG+FISCDIPMAQFIIN+NASLPASQ+FI+H++DSTH+FVQP V EMIRS IA+F
Sbjct: 1 MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHVMDSTHLFVQPHVSEMIRSAIADF 60
Query: 147 RDQNTYEKP 121
RDQN+YEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_010533744.1| PREDICTED: RNA polymerase II transcription factor B subunit 5
[Tarenaya hassleriana]
Length = 70
Score = 122 bits (307), Expect = 1e-32
Identities = 58/69 (84%), Positives = 64/69 (92%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNAIKG+FISCDIPMAQFIIN+N S+PASQ+FI+HILDSTHMFVQP V MIRS IAEF
Sbjct: 1 MVNAIKGVFISCDIPMAQFIINLNNSMPASQKFIIHILDSTHMFVQPHVEHMIRSAIAEF 60
Query: 147 RDQNTYEKP 121
RDQN+YEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_015645359.1| PREDICTED: general transcription factor IIH subunit 5 [Oryza sativa
Japonica Group]
dbj|BAC83153.1| unknown protein [Oryza sativa Japonica Group]
dbj|BAF21982.1| Os07g0573600 [Oryza sativa Japonica Group]
dbj|BAG93712.1| unnamed protein product [Oryza sativa Japonica Group]
gb|EEC82307.1| hypothetical protein OsI_26568 [Oryza sativa Indica Group]
gb|EEE67451.1| hypothetical protein OsJ_24828 [Oryza sativa Japonica Group]
dbj|BAT02262.1| Os07g0573600 [Oryza sativa Japonica Group]
Length = 131
Score = 124 bits (311), Expect = 2e-32
Identities = 65/110 (59%), Positives = 82/110 (74%)
Frame = -1
Query: 450 SSPAVDPLSARRPLVHRSKTWTPRRDQFPNRRIKRST*YCKMVNAIKGIFISCDIPMAQF 271
SSP S +R R T RR ++ + ++R+ MVNAIKG+FISCD+PMAQF
Sbjct: 25 SSPVCSYRSVQRRTGAREDNSTGRRQRW-HSVLQRAE---NMVNAIKGLFISCDVPMAQF 80
Query: 270 IINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEFRDQNTYEKP 121
I+N+NAS+PAS +FI+H+LD THMFVQP V EMIRSKI+EFRDQN+YEKP
Sbjct: 81 IVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRSKISEFRDQNSYEKP 130
>ref|XP_015584007.1| PREDICTED: general transcription factor IIH subunit 5 [Ricinus
communis]
Length = 70
Score = 122 bits (305), Expect = 3e-32
Identities = 56/70 (80%), Positives = 64/70 (91%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNA KG+FISCDIPMAQFIINMNA+LP SQ+FI+H+LD TH+FVQP V EMIRS IAEF
Sbjct: 1 MVNATKGLFISCDIPMAQFIINMNATLPTSQKFIIHVLDGTHLFVQPHVAEMIRSAIAEF 60
Query: 147 RDQNTYEKPA 118
RDQN+YEKP+
Sbjct: 61 RDQNSYEKPS 70
>ref|XP_021669359.1| RNA polymerase II transcription factor B subunit 5 [Hevea
brasiliensis]
ref|XP_021669360.1| RNA polymerase II transcription factor B subunit 5 [Hevea
brasiliensis]
Length = 70
Score = 121 bits (304), Expect = 4e-32
Identities = 55/69 (79%), Positives = 65/69 (94%)
Frame = -1
Query: 327 MVNAIKGIFISCDIPMAQFIINMNASLPASQRFIVHILDSTHMFVQPTVGEMIRSKIAEF 148
MVNA KG+FISCDIPMAQFIIN+NASLPASQ+FI+H++DSTH+FVQP V EMIRS I++F
Sbjct: 1 MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHVIDSTHLFVQPHVSEMIRSAISDF 60
Query: 147 RDQNTYEKP 121
RDQN+YEKP
Sbjct: 61 RDQNSYEKP 69