BLASTX nr result

ID: Ophiopogon23_contig00008345 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00008345
         (496 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009382116.1| PREDICTED: protein TIC110, chloroplastic [Mu...    61   8e-08

>ref|XP_009382116.1| PREDICTED: protein TIC110, chloroplastic [Musa acuminata subsp.
           malaccensis]
          Length = 1018

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/77 (44%), Positives = 42/77 (54%)
 Frame = -1

Query: 235 AASTPSISTDNVKPKVDPSIFLPKKEVAGPKSAFGALPQPXXXXXXXXXXXXXXXAGFGL 56
           +A   + S     P VDPS+F   KE++GP++   ALP P               AGFGL
Sbjct: 56  SADAAAASAPEASPAVDPSVFGGPKELSGPQALVCALPPPARMASSAVLAAAAMAAGFGL 115

Query: 55  GFRFGQSRVAGIGGAAV 5
           G R G S+VAGIGGAAV
Sbjct: 116 GLRVGGSKVAGIGGAAV 132


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