BLASTX nr result
ID: Ophiopogon23_contig00007824
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00007824
(630 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020262890.1| ribosome maturation protein SBDS [Asparagus ... 96 9e-20
gb|ONK72547.1| uncharacterized protein A4U43_C04F20560 [Asparagu... 96 1e-19
ref|XP_011101869.1| ribosome maturation protein SBDS [Sesamum in... 92 3e-18
ref|XP_008805180.1| PREDICTED: ribosome maturation protein SBDS ... 91 7e-18
gb|PIN13015.1| putative exosome subunit [Handroanthus impetigino... 91 7e-18
ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS ... 90 1e-17
emb|CAN72873.1| hypothetical protein VITISV_030008 [Vitis vinifera] 88 1e-17
ref|XP_010932822.1| PREDICTED: ribosome maturation protein SBDS ... 89 3e-17
ref|XP_002520247.1| PREDICTED: ribosome maturation protein SBDS ... 89 3e-17
gb|KZV41760.1| ribosome maturation protein SBDS-like [Dorcoceras... 89 3e-17
gb|OVA07495.1| Ribosome maturation protein SBDS [Macleaya cordata] 89 3e-17
gb|PON99711.1| Ribosome maturation protein Sdo1/SBDS [Trema orie... 88 7e-17
gb|KCW65155.1| hypothetical protein EUGRSUZ_G02653 [Eucalyptus g... 87 9e-17
gb|KDO83571.1| hypothetical protein CISIN_1g042018mg [Citrus sin... 87 9e-17
dbj|GAY52019.1| hypothetical protein CUMW_138750 [Citrus unshiu] 87 1e-16
ref|XP_006472901.1| PREDICTED: ribosome maturation protein SBDS ... 87 1e-16
ref|XP_021905747.1| ribosome maturation protein SBDS [Carica pap... 87 1e-16
ref|XP_021675732.1| ribosome maturation protein SBDS isoform X2 ... 86 1e-16
ref|XP_010067086.1| PREDICTED: ribosome maturation protein SBDS ... 87 1e-16
ref|XP_018715320.1| PREDICTED: ribosome maturation protein SBDS ... 87 2e-16
>ref|XP_020262890.1| ribosome maturation protein SBDS [Asparagus officinalis]
Length = 336
Score = 95.5 bits (236), Expect = 9e-20
Identities = 46/56 (82%), Positives = 53/56 (94%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVVN 170
EVIRELQKHFPIKRSPMRLRLTVP+GNL SL+EKL+SWNASIIS+DES +Q SV++
Sbjct: 133 EVIRELQKHFPIKRSPMRLRLTVPQGNLPSLLEKLSSWNASIISKDESGDQFSVIS 188
>gb|ONK72547.1| uncharacterized protein A4U43_C04F20560 [Asparagus officinalis]
Length = 360
Score = 95.5 bits (236), Expect = 1e-19
Identities = 46/56 (82%), Positives = 53/56 (94%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVVN 170
EVIRELQKHFPIKRSPMRLRLTVP+GNL SL+EKL+SWNASIIS+DES +Q SV++
Sbjct: 157 EVIRELQKHFPIKRSPMRLRLTVPQGNLPSLLEKLSSWNASIISKDESGDQFSVIS 212
>ref|XP_011101869.1| ribosome maturation protein SBDS [Sesamum indicum]
Length = 357
Score = 91.7 bits (226), Expect = 3e-18
Identities = 41/55 (74%), Positives = 50/55 (90%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVV 167
EVIRELQKHFPIKRSPMRLRLT+PE N+S L+EK+N WN++IIS DES +QRS++
Sbjct: 158 EVIRELQKHFPIKRSPMRLRLTIPEENISPLLEKINGWNSTIISRDESGSQRSII 212
>ref|XP_008805180.1| PREDICTED: ribosome maturation protein SBDS [Phoenix dactylifera]
Length = 356
Score = 90.5 bits (223), Expect = 7e-18
Identities = 44/55 (80%), Positives = 48/55 (87%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVV 167
EVIREL+KHFPIKRSPMRLRL VPE N S LM+KLN WNASI+S+DES NQ SVV
Sbjct: 158 EVIRELEKHFPIKRSPMRLRLIVPEKNFSVLMDKLNGWNASIVSKDESGNQLSVV 212
>gb|PIN13015.1| putative exosome subunit [Handroanthus impetiginosus]
Length = 357
Score = 90.5 bits (223), Expect = 7e-18
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVV 167
EVIRELQKHFPIKRSPMRLRLTVPE N SSL+EK++ WN++I+S DES NQ SV+
Sbjct: 158 EVIRELQKHFPIKRSPMRLRLTVPEQNFSSLLEKISDWNSAIVSRDESGNQLSVI 212
>ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS [Vitis vinifera]
emb|CBI19950.3| unnamed protein product, partial [Vitis vinifera]
Length = 358
Score = 90.1 bits (222), Expect = 1e-17
Identities = 44/62 (70%), Positives = 50/62 (80%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVVNRSIE 182
EVIRELQKHFPIKR PMRLRLTVP+ N SSL+EKLN WNASI+S+DES Q S++
Sbjct: 159 EVIRELQKHFPIKRCPMRLRLTVPQQNFSSLLEKLNVWNASIVSKDESGGQLSIICEMEP 218
Query: 183 GI 188
GI
Sbjct: 219 GI 220
>emb|CAN72873.1| hypothetical protein VITISV_030008 [Vitis vinifera]
Length = 250
Score = 88.2 bits (217), Expect = 1e-17
Identities = 42/54 (77%), Positives = 47/54 (87%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSV 164
EVIRELQKHFPIKR PMRLRLTVP+ N SSL+EKLN WNASI+S+DES Q S+
Sbjct: 137 EVIRELQKHFPIKRCPMRLRLTVPQQNFSSLLEKLNVWNASIVSKDESGGQLSI 190
>ref|XP_010932822.1| PREDICTED: ribosome maturation protein SBDS [Elaeis guineensis]
ref|XP_010932823.1| PREDICTED: ribosome maturation protein SBDS [Elaeis guineensis]
ref|XP_010932824.1| PREDICTED: ribosome maturation protein SBDS [Elaeis guineensis]
Length = 356
Score = 89.0 bits (219), Expect = 3e-17
Identities = 43/55 (78%), Positives = 48/55 (87%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVV 167
EVIRELQKHFPIKRSPMRLRL VPE N S LM+KL+ WNA I+S+DES NQ+SVV
Sbjct: 158 EVIRELQKHFPIKRSPMRLRLIVPEKNFSVLMDKLDGWNARIVSKDESGNQQSVV 212
>ref|XP_002520247.1| PREDICTED: ribosome maturation protein SBDS [Ricinus communis]
gb|EEF42033.1| Shwachman-Bodian-Diamond syndrome protein, putative [Ricinus
communis]
Length = 356
Score = 89.0 bits (219), Expect = 3e-17
Identities = 42/65 (64%), Positives = 53/65 (81%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVVNRSIE 182
EVIRELQKHFPIKRSPMRLRL + E N+SSL+EKLN+WNA+++S+DES +Q SV+
Sbjct: 158 EVIRELQKHFPIKRSPMRLRLAISEPNISSLLEKLNTWNATVVSKDESGSQLSVICELDP 217
Query: 183 GISEE 197
G+ E
Sbjct: 218 GLFRE 222
>gb|KZV41760.1| ribosome maturation protein SBDS-like [Dorcoceras hygrometricum]
Length = 357
Score = 89.0 bits (219), Expect = 3e-17
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVV 167
EVIRELQKHFPIKRSPMRLRLTVPE ++SSL+EK+N WNA ++S DES +Q SV+
Sbjct: 158 EVIRELQKHFPIKRSPMRLRLTVPEQHVSSLLEKINGWNAMVVSRDESGSQLSVI 212
>gb|OVA07495.1| Ribosome maturation protein SBDS [Macleaya cordata]
Length = 369
Score = 89.0 bits (219), Expect = 3e-17
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVV 167
EVIRELQKHFPIKR+PMRLR VPE N SSLMEKLN WNA I+S+DES NQ S++
Sbjct: 163 EVIRELQKHFPIKRAPMRLRFIVPENNFSSLMEKLNGWNARIVSKDESGNQLSLL 217
>gb|PON99711.1| Ribosome maturation protein Sdo1/SBDS [Trema orientalis]
Length = 360
Score = 87.8 bits (216), Expect = 7e-17
Identities = 43/65 (66%), Positives = 49/65 (75%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVVNRSIE 182
EVI ELQKHFPIKRSPMRLR TVPE LSSL EKLN+WNA ++S D+S NQ SV+
Sbjct: 158 EVIHELQKHFPIKRSPMRLRFTVPEEGLSSLTEKLNAWNAKVVSTDQSGNQPSVICELDP 217
Query: 183 GISEE 197
G+ E
Sbjct: 218 GLYRE 222
>gb|KCW65155.1| hypothetical protein EUGRSUZ_G02653 [Eucalyptus grandis]
Length = 315
Score = 87.0 bits (214), Expect = 9e-17
Identities = 45/69 (65%), Positives = 53/69 (76%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVVNRSIE 182
EVIRELQKH+PIKR+PMRLR TV E N+SSL+EKLN+WNASIIS+DESA Q V+
Sbjct: 119 EVIRELQKHYPIKRAPMRLRFTVTEQNVSSLLEKLNTWNASIISKDESAGQIFVIG---- 174
Query: 183 GISEEVAPG 209
E+ PG
Sbjct: 175 ----EIEPG 179
>gb|KDO83571.1| hypothetical protein CISIN_1g042018mg [Citrus sinensis]
Length = 346
Score = 87.4 bits (215), Expect = 9e-17
Identities = 41/55 (74%), Positives = 50/55 (90%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVV 167
EVIRELQKHFPIKRSPMR+ LTVPE N+SSLMEKL++WNASI+S+D S +Q S++
Sbjct: 147 EVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLDAWNASIVSKDNSGSQLSLI 201
>dbj|GAY52019.1| hypothetical protein CUMW_138750 [Citrus unshiu]
Length = 357
Score = 87.4 bits (215), Expect = 1e-16
Identities = 41/55 (74%), Positives = 50/55 (90%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVV 167
EVIRELQKHFPIKRSPMR+ LTVPE N+SSLMEKL++WNASI+S+D S +Q S++
Sbjct: 158 EVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLDAWNASIVSKDNSGSQLSLI 212
>ref|XP_006472901.1| PREDICTED: ribosome maturation protein SBDS [Citrus sinensis]
Length = 357
Score = 87.4 bits (215), Expect = 1e-16
Identities = 41/55 (74%), Positives = 50/55 (90%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVV 167
EVIRELQKHFPIKRSPMR+ LTVPE N+SSLMEKL++WNASI+S+D S +Q S++
Sbjct: 158 EVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLDAWNASIVSKDNSGSQLSLI 212
>ref|XP_021905747.1| ribosome maturation protein SBDS [Carica papaya]
ref|XP_021905748.1| ribosome maturation protein SBDS [Carica papaya]
Length = 373
Score = 87.4 bits (215), Expect = 1e-16
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVV 167
EVIRELQKH+PI RSPMRLRLTVP+ N SSL+EKLN WNASI+S+DESA Q V+
Sbjct: 158 EVIRELQKHYPINRSPMRLRLTVPQQNYSSLLEKLNVWNASIVSKDESATQPYVI 212
>ref|XP_021675732.1| ribosome maturation protein SBDS isoform X2 [Hevea brasiliensis]
Length = 289
Score = 86.3 bits (212), Expect = 1e-16
Identities = 40/55 (72%), Positives = 50/55 (90%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVV 167
EVIRELQKHFPIKRSPMRLRL + + NLS+L+EKLN+WNA+I+S+DES +Q SV+
Sbjct: 91 EVIRELQKHFPIKRSPMRLRLIIAKPNLSTLLEKLNAWNATIVSKDESGSQLSVI 145
>ref|XP_010067086.1| PREDICTED: ribosome maturation protein SBDS isoform X2 [Eucalyptus
grandis]
ref|XP_018715321.1| PREDICTED: ribosome maturation protein SBDS isoform X2 [Eucalyptus
grandis]
ref|XP_018715322.1| PREDICTED: ribosome maturation protein SBDS isoform X2 [Eucalyptus
grandis]
gb|KCW65153.1| hypothetical protein EUGRSUZ_G02653 [Eucalyptus grandis]
gb|KCW65154.1| hypothetical protein EUGRSUZ_G02653 [Eucalyptus grandis]
Length = 354
Score = 87.0 bits (214), Expect = 1e-16
Identities = 45/69 (65%), Positives = 53/69 (76%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVVNRSIE 182
EVIRELQKH+PIKR+PMRLR TV E N+SSL+EKLN+WNASIIS+DESA Q V+
Sbjct: 158 EVIRELQKHYPIKRAPMRLRFTVTEQNVSSLLEKLNTWNASIISKDESAGQIFVIG---- 213
Query: 183 GISEEVAPG 209
E+ PG
Sbjct: 214 ----EIEPG 218
>ref|XP_018715320.1| PREDICTED: ribosome maturation protein SBDS isoform X1 [Eucalyptus
grandis]
Length = 385
Score = 87.0 bits (214), Expect = 2e-16
Identities = 45/69 (65%), Positives = 53/69 (76%)
Frame = +3
Query: 3 EVIRELQKHFPIKRSPMRLRLTVPEGNLSSLMEKLNSWNASIISEDESANQRSVVNRSIE 182
EVIRELQKH+PIKR+PMRLR TV E N+SSL+EKLN+WNASIIS+DESA Q V+
Sbjct: 189 EVIRELQKHYPIKRAPMRLRFTVTEQNVSSLLEKLNTWNASIISKDESAGQIFVIG---- 244
Query: 183 GISEEVAPG 209
E+ PG
Sbjct: 245 ----EIEPG 249