BLASTX nr result

ID: Ophiopogon23_contig00007447 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00007447
         (787 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO85734.1| hypothetical protein CCACVL1_10032 [Corchorus cap...    60   1e-06
emb|CAN79777.1| hypothetical protein VITISV_013615 [Vitis vinifera]    57   2e-06
gb|ERN03191.1| hypothetical protein AMTR_s00003p00144250 [Ambore...    56   3e-06
gb|PKI76166.1| hypothetical protein CRG98_003527, partial [Punic...    56   6e-06
ref|XP_020273316.1| LOW QUALITY PROTEIN: pre-mRNA-splicing facto...    58   6e-06
ref|XP_021827873.1| pre-mRNA-splicing factor 38-like [Prunus avium]    57   6e-06
gb|ONK63381.1| uncharacterized protein A4U43_C07F14540 [Asparagu...    58   6e-06
gb|KMZ71220.1| Pre-mRNA-splicing factor 38A [Zostera marina]           57   8e-06
ref|XP_020521157.1| pre-mRNA-splicing factor 38 [Amborella trich...    56   9e-06

>gb|OMO85734.1| hypothetical protein CCACVL1_10032 [Corchorus capsularis]
          Length = 837

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 31/57 (54%), Positives = 33/57 (57%)
 Frame = +1

Query: 121 HAHSSVSXXXXXXXXXXXXXXXXXXXXXXSDGTDHPDPEIAEANRLRASLGLKPLQL 291
           HAH S+S                       DGTDHPDPEIAEANRLRASLGLKPL+L
Sbjct: 781 HAHGSISPRGHQAQDESAREKTNKKKAKNDDGTDHPDPEIAEANRLRASLGLKPLRL 837


>emb|CAN79777.1| hypothetical protein VITISV_013615 [Vitis vinifera]
          Length = 168

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +1

Query: 211 DGTDHPDPEIAEANRLRASLGLKPLQL 291
           DGTDHPDPEIAEANRLRASLGLKPL+L
Sbjct: 142 DGTDHPDPEIAEANRLRASLGLKPLKL 168


>gb|ERN03191.1| hypothetical protein AMTR_s00003p00144250 [Amborella trichopoda]
          Length = 150

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +1

Query: 211 DGTDHPDPEIAEANRLRASLGLKPLQL 291
           DGTDHPDPEIAEANRLRASLGLKPL++
Sbjct: 124 DGTDHPDPEIAEANRLRASLGLKPLKM 150


>gb|PKI76166.1| hypothetical protein CRG98_003527, partial [Punica granatum]
          Length = 169

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +1

Query: 211 DGTDHPDPEIAEANRLRASLGLKPLQL 291
           DGTDHPDPEIAEANRLRASLGLKPL++
Sbjct: 143 DGTDHPDPEIAEANRLRASLGLKPLRV 169


>ref|XP_020273316.1| LOW QUALITY PROTEIN: pre-mRNA-splicing factor 38 [Asparagus
           officinalis]
          Length = 373

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +1

Query: 208 SDGTDHPDPEIAEANRLRASLGLKPLQL 291
           SDGTDHPDPEIAEANRLRASLGLKPL++
Sbjct: 346 SDGTDHPDPEIAEANRLRASLGLKPLKM 373


>ref|XP_021827873.1| pre-mRNA-splicing factor 38-like [Prunus avium]
          Length = 216

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = +1

Query: 208 SDGTDHPDPEIAEANRLRASLGLKPLQL 291
           +DGTDHPDPEIAEANRLRASLGLKPL++
Sbjct: 189 TDGTDHPDPEIAEANRLRASLGLKPLKM 216


>gb|ONK63381.1| uncharacterized protein A4U43_C07F14540 [Asparagus officinalis]
          Length = 380

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +1

Query: 208 SDGTDHPDPEIAEANRLRASLGLKPLQL 291
           SDGTDHPDPEIAEANRLRASLGLKPL++
Sbjct: 353 SDGTDHPDPEIAEANRLRASLGLKPLKM 380


>gb|KMZ71220.1| Pre-mRNA-splicing factor 38A [Zostera marina]
          Length = 361

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +1

Query: 208 SDGTDHPDPEIAEANRLRASLGLKPLQL 291
           +DGTDHPDPEIAEANRLRASLGLKPL+L
Sbjct: 334 NDGTDHPDPEIAEANRLRASLGLKPLKL 361


>ref|XP_020521157.1| pre-mRNA-splicing factor 38 [Amborella trichopoda]
          Length = 223

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +1

Query: 211 DGTDHPDPEIAEANRLRASLGLKPLQL 291
           DGTDHPDPEIAEANRLRASLGLKPL++
Sbjct: 197 DGTDHPDPEIAEANRLRASLGLKPLKM 223


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