BLASTX nr result
ID: Ophiopogon23_contig00007305
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00007305
(687 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020265915.1| mediator of RNA polymerase II transcription ... 89 1e-16
gb|ONK70596.1| uncharacterized protein A4U43_C05F35400 [Asparagu... 89 2e-16
gb|PKA59977.1| Mediator of RNA polymerase II transcription subun... 82 2e-14
ref|XP_018680715.1| PREDICTED: mediator of RNA polymerase II tra... 78 5e-13
ref|XP_009395463.1| PREDICTED: mediator of RNA polymerase II tra... 78 5e-13
ref|XP_018680714.1| PREDICTED: mediator of RNA polymerase II tra... 78 5e-13
ref|XP_008789630.1| PREDICTED: mediator of RNA polymerase II tra... 77 1e-12
gb|KMZ59861.1| Mediator of RNA polymerase II transcription subun... 76 2e-12
ref|XP_020692466.1| mediator of RNA polymerase II transcription ... 76 3e-12
ref|XP_020692465.1| mediator of RNA polymerase II transcription ... 76 3e-12
ref|XP_010928713.1| PREDICTED: mediator of RNA polymerase II tra... 76 3e-12
gb|PKU63591.1| Mediator of RNA polymerase II transcription subun... 76 4e-12
ref|XP_020109634.1| mediator of RNA polymerase II transcription ... 74 1e-11
ref|XP_020109633.1| mediator of RNA polymerase II transcription ... 74 2e-11
ref|XP_020109631.1| mediator of RNA polymerase II transcription ... 74 2e-11
gb|OUZ99223.1| hypothetical protein BVC80_8967g31 [Macleaya cord... 73 4e-11
ref|XP_022723674.1| mediator of RNA polymerase II transcription ... 71 2e-10
ref|XP_022723673.1| mediator of RNA polymerase II transcription ... 71 2e-10
gb|ONM57007.1| Mediator of RNA polymerase II transcription subun... 69 3e-10
gb|KQL25696.1| hypothetical protein SETIT_029396mg [Setaria ital... 70 3e-10
>ref|XP_020265915.1| mediator of RNA polymerase II transcription subunit 8 [Asparagus
officinalis]
Length = 544
Score = 88.6 bits (218), Expect = 1e-16
Identities = 51/84 (60%), Positives = 53/84 (63%)
Frame = +1
Query: 436 NTGPQLIGRSVPSPSGAPVSFDNVSTPPLPYVNSPRSGTNMMNMPSXXXXXXXXXXXXXX 615
N+G QLIGRSV SPSG P SFDN STPPL Y NSPRSGTNMMN PS
Sbjct: 281 NSGAQLIGRSVASPSGGPASFDNASTPPLQYANSPRSGTNMMNTPS---PQQQQQRQKMM 337
Query: 616 XXXXXXLLAHQQLRKSATAGVLGQ 687
LLA QQLR+S T GVLGQ
Sbjct: 338 QIPQHQLLAQQQLRQS-TTGVLGQ 360
>gb|ONK70596.1| uncharacterized protein A4U43_C05F35400 [Asparagus officinalis]
Length = 733
Score = 88.6 bits (218), Expect = 2e-16
Identities = 51/84 (60%), Positives = 53/84 (63%)
Frame = +1
Query: 436 NTGPQLIGRSVPSPSGAPVSFDNVSTPPLPYVNSPRSGTNMMNMPSXXXXXXXXXXXXXX 615
N+G QLIGRSV SPSG P SFDN STPPL Y NSPRSGTNMMN PS
Sbjct: 281 NSGAQLIGRSVASPSGGPASFDNASTPPLQYANSPRSGTNMMNTPS---PQQQQQRQKMM 337
Query: 616 XXXXXXLLAHQQLRKSATAGVLGQ 687
LLA QQLR+S T GVLGQ
Sbjct: 338 QIPQHQLLAQQQLRQS-TTGVLGQ 360
>gb|PKA59977.1| Mediator of RNA polymerase II transcription subunit 8 [Apostasia
shenzhenica]
Length = 553
Score = 82.4 bits (202), Expect = 2e-14
Identities = 46/87 (52%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Frame = +1
Query: 442 GPQLIGRSVPSPSGA--PVSFDNVSTPPLPYVNSPRSGTNMMNMPS---XXXXXXXXXXX 606
G QL+GRSVPSPS P +FDNVSTPPLPY NSPRSG N+MN PS
Sbjct: 281 GGQLVGRSVPSPSNVTVPANFDNVSTPPLPYANSPRSGANIMNTPSPQQQTQPPQQRQKM 340
Query: 607 XXXXXXXXXLLAHQQLRKSATAGVLGQ 687
LLA QQLR+++TA +LGQ
Sbjct: 341 MQVPQHQQQLLAQQQLRQTSTAAILGQ 367
>ref|XP_018680715.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform X3 [Musa acuminata subsp. malaccensis]
Length = 496
Score = 78.2 bits (191), Expect = 5e-13
Identities = 53/115 (46%), Positives = 59/115 (51%), Gaps = 15/115 (13%)
Frame = +1
Query: 388 YIKEAPRVGSASSKNLNT-------GPQLIGRSVPSPSGAPVSFDNVSTPPLPYVNSPRS 546
Y K P SS N+NT G QLI RSVPSPS A SFDN STPP+PYVNSPRS
Sbjct: 258 YTKNTPPF---SSNNVNTQGILQTPGGQLIARSVPSPSSA-ASFDNASTPPMPYVNSPRS 313
Query: 547 GTNMMNMPS--------XXXXXXXXXXXXXXXXXXXXLLAHQQLRKSATAGVLGQ 687
TN+ N PS LL QQLR+S++ GVLGQ
Sbjct: 314 STNITNTPSPQQQVQQQQQQQQQQRQKVMQLPQHQQQLLVQQQLRQSSSTGVLGQ 368
>ref|XP_009395463.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 550
Score = 78.2 bits (191), Expect = 5e-13
Identities = 53/115 (46%), Positives = 59/115 (51%), Gaps = 15/115 (13%)
Frame = +1
Query: 388 YIKEAPRVGSASSKNLNT-------GPQLIGRSVPSPSGAPVSFDNVSTPPLPYVNSPRS 546
Y K P SS N+NT G QLI RSVPSPS A SFDN STPP+PYVNSPRS
Sbjct: 257 YTKNTPPF---SSNNVNTQGILQTPGGQLIARSVPSPSSA-ASFDNASTPPMPYVNSPRS 312
Query: 547 GTNMMNMPS--------XXXXXXXXXXXXXXXXXXXXLLAHQQLRKSATAGVLGQ 687
TN+ N PS LL QQLR+S++ GVLGQ
Sbjct: 313 STNITNTPSPQQQVQQQQQQQQQQRQKVMQLPQHQQQLLVQQQLRQSSSTGVLGQ 367
>ref|XP_018680714.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 551
Score = 78.2 bits (191), Expect = 5e-13
Identities = 53/115 (46%), Positives = 59/115 (51%), Gaps = 15/115 (13%)
Frame = +1
Query: 388 YIKEAPRVGSASSKNLNT-------GPQLIGRSVPSPSGAPVSFDNVSTPPLPYVNSPRS 546
Y K P SS N+NT G QLI RSVPSPS A SFDN STPP+PYVNSPRS
Sbjct: 258 YTKNTPPF---SSNNVNTQGILQTPGGQLIARSVPSPSSA-ASFDNASTPPMPYVNSPRS 313
Query: 547 GTNMMNMPS--------XXXXXXXXXXXXXXXXXXXXLLAHQQLRKSATAGVLGQ 687
TN+ N PS LL QQLR+S++ GVLGQ
Sbjct: 314 STNITNTPSPQQQVQQQQQQQQQQRQKVMQLPQHQQQLLVQQQLRQSSSTGVLGQ 368
>ref|XP_008789630.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Phoenix dactylifera]
Length = 549
Score = 77.0 bits (188), Expect = 1e-12
Identities = 53/114 (46%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Frame = +1
Query: 388 YIKEAPRVGSASSKNLNT--------GPQLIGRSVPSPSGAP--VSFDNVSTPPLPYVNS 537
Y K P S SS ++T G QLIGR PSPSG SFDN STPPLPY NS
Sbjct: 260 YTKNTP---SFSSNTVSTQGAVMQTPGTQLIGRPAPSPSGVTGTASFDNASTPPLPYANS 316
Query: 538 PRSGTNMMNMPS----XXXXXXXXXXXXXXXXXXXXLLAHQQLRKSATAGVLGQ 687
PRS TNMMN PS L A QQLR+S + GVLGQ
Sbjct: 317 PRSSTNMMNTPSPQQQTQQQQQRQKMMQLPQQHQQQLHAQQQLRQSPSQGVLGQ 370
>gb|KMZ59861.1| Mediator of RNA polymerase II transcription subunit 8 [Zostera
marina]
Length = 530
Score = 76.3 bits (186), Expect = 2e-12
Identities = 53/138 (38%), Positives = 66/138 (47%), Gaps = 27/138 (19%)
Frame = +1
Query: 355 PPPSFLATMEEYIKEAPRVG---------------SASSKNLNTGPQLIGRSVPSPSGAP 489
P P+ L+ + I++ P +G S S N TG QLIG+SVPSPSGA
Sbjct: 225 PLPAHLSDILTQIEDLPGLGENSNSHQRNTPLSMSSGSITNQGTGTQLIGKSVPSPSGAT 284
Query: 490 --VSFDNVSTPPLPYVNSPRSGTNMMNMPSXXXXXXXXXXXXXXXXXXXXLLAH------ 645
S DNVSTPPLPY NSPRS +MMN PS L H
Sbjct: 285 GTPSMDNVSTPPLPYTNSPRSNVSMMNTPSPQQQQHILQQQQQQQRRLNPLQQHHQQLLV 344
Query: 646 ----QQLRKSATAGVLGQ 687
QQLR+ +++ +LGQ
Sbjct: 345 QQQQQQLRQQSSSTLLGQ 362
>ref|XP_020692466.1| mediator of RNA polymerase II transcription subunit 8 isoform X2
[Dendrobium catenatum]
Length = 536
Score = 75.9 bits (185), Expect = 3e-12
Identities = 43/90 (47%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Frame = +1
Query: 439 TGPQLIGRSVPSPSGAPVSFDNVSTPPLPYVNSPRSGTNMMNMPS-------XXXXXXXX 597
TG Q+IGRSVPSPSG SFDN STPP PY NSPRSG N+MN PS
Sbjct: 263 TGGQMIGRSVPSPSGVSSSFDNASTPPPPYANSPRSGGNIMNTPSPQQQTQQQQQQQQQR 322
Query: 598 XXXXXXXXXXXXLLAHQQLRKSATAGVLGQ 687
LLA QQLR+ ++ +L Q
Sbjct: 323 QKMMQMPQHQQQLLAQQQLRQPSSTAILAQ 352
>ref|XP_020692465.1| mediator of RNA polymerase II transcription subunit 8 isoform X1
[Dendrobium catenatum]
Length = 546
Score = 75.9 bits (185), Expect = 3e-12
Identities = 43/90 (47%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Frame = +1
Query: 439 TGPQLIGRSVPSPSGAPVSFDNVSTPPLPYVNSPRSGTNMMNMPS-------XXXXXXXX 597
TG Q+IGRSVPSPSG SFDN STPP PY NSPRSG N+MN PS
Sbjct: 273 TGGQMIGRSVPSPSGVSSSFDNASTPPPPYANSPRSGGNIMNTPSPQQQTQQQQQQQQQR 332
Query: 598 XXXXXXXXXXXXLLAHQQLRKSATAGVLGQ 687
LLA QQLR+ ++ +L Q
Sbjct: 333 QKMMQMPQHQQQLLAQQQLRQPSSTAILAQ 362
>ref|XP_010928713.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
[Elaeis guineensis]
Length = 550
Score = 75.9 bits (185), Expect = 3e-12
Identities = 52/114 (45%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Frame = +1
Query: 388 YIKEAPRVGSASSKNLNT--------GPQLIGRSVPSPSGAP--VSFDNVSTPPLPYVNS 537
Y K P S SS ++T G QL+GR PSPSG SFDN STPPLPY NS
Sbjct: 260 YTKNTP---SFSSNTVSTQGAVMQTPGTQLMGRPAPSPSGVTGTASFDNASTPPLPYANS 316
Query: 538 PRSGTNMMNMPS----XXXXXXXXXXXXXXXXXXXXLLAHQQLRKSATAGVLGQ 687
PRS TNMMN PS L A QQLR+S + GVLGQ
Sbjct: 317 PRSSTNMMNTPSPQQQTQQQQQRQKMMQIPQQHQQQLHAQQQLRQSPSPGVLGQ 370
>gb|PKU63591.1| Mediator of RNA polymerase II transcription subunit 8 [Dendrobium
catenatum]
Length = 857
Score = 75.9 bits (185), Expect = 4e-12
Identities = 43/90 (47%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Frame = +1
Query: 439 TGPQLIGRSVPSPSGAPVSFDNVSTPPLPYVNSPRSGTNMMNMPS-------XXXXXXXX 597
TG Q+IGRSVPSPSG SFDN STPP PY NSPRSG N+MN PS
Sbjct: 362 TGGQMIGRSVPSPSGVSSSFDNASTPPPPYANSPRSGGNIMNTPSPQQQTQQQQQQQQQR 421
Query: 598 XXXXXXXXXXXXLLAHQQLRKSATAGVLGQ 687
LLA QQLR+ ++ +L Q
Sbjct: 422 QKMMQMPQHQQQLLAQQQLRQPSSTAILAQ 451
>ref|XP_020109634.1| mediator of RNA polymerase II transcription subunit 8 isoform X3
[Ananas comosus]
Length = 462
Score = 73.9 bits (180), Expect = 1e-11
Identities = 50/116 (43%), Positives = 55/116 (47%), Gaps = 16/116 (13%)
Frame = +1
Query: 388 YIKEAPRVGSASSKNLNT-----GPQLIGRSVPSPSGAPVS--FDNVSTPPLPYVNSPRS 546
Y K P S + N T G Q IGRS PSPSG + FDN STPP+PY NSPRS
Sbjct: 261 YSKNTPAFTSNAVNNQGTPIQAPGAQQIGRSAPSPSGVSGTGNFDNASTPPMPYANSPRS 320
Query: 547 GTNMMNMPS---------XXXXXXXXXXXXXXXXXXXXLLAHQQLRKSATAGVLGQ 687
TNMMN PS L + QQLR S+T GVLGQ
Sbjct: 321 STNMMNTPSPQQQLQQQLQQQQQQRQKMMQVPSQHQQQLHSQQQLRPSSTPGVLGQ 376
>ref|XP_020109633.1| mediator of RNA polymerase II transcription subunit 8 isoform X2
[Ananas comosus]
Length = 559
Score = 73.9 bits (180), Expect = 2e-11
Identities = 50/116 (43%), Positives = 55/116 (47%), Gaps = 16/116 (13%)
Frame = +1
Query: 388 YIKEAPRVGSASSKNLNT-----GPQLIGRSVPSPSGAPVS--FDNVSTPPLPYVNSPRS 546
Y K P S + N T G Q IGRS PSPSG + FDN STPP+PY NSPRS
Sbjct: 261 YSKNTPAFTSNAVNNQGTPIQAPGAQQIGRSAPSPSGVSGTGNFDNASTPPMPYANSPRS 320
Query: 547 GTNMMNMPS---------XXXXXXXXXXXXXXXXXXXXLLAHQQLRKSATAGVLGQ 687
TNMMN PS L + QQLR S+T GVLGQ
Sbjct: 321 STNMMNTPSPQQQLQQQLQQQQQQRQKMMQVPSQHQQQLHSQQQLRPSSTPGVLGQ 376
>ref|XP_020109631.1| mediator of RNA polymerase II transcription subunit 8 isoform X1
[Ananas comosus]
Length = 571
Score = 73.9 bits (180), Expect = 2e-11
Identities = 50/116 (43%), Positives = 55/116 (47%), Gaps = 16/116 (13%)
Frame = +1
Query: 388 YIKEAPRVGSASSKNLNT-----GPQLIGRSVPSPSGAPVS--FDNVSTPPLPYVNSPRS 546
Y K P S + N T G Q IGRS PSPSG + FDN STPP+PY NSPRS
Sbjct: 261 YSKNTPAFTSNAVNNQGTPIQAPGAQQIGRSAPSPSGVSGTGNFDNASTPPMPYANSPRS 320
Query: 547 GTNMMNMPS---------XXXXXXXXXXXXXXXXXXXXLLAHQQLRKSATAGVLGQ 687
TNMMN PS L + QQLR S+T GVLGQ
Sbjct: 321 STNMMNTPSPQQQLQQQLQQQQQQRQKMMQVPSQHQQQLHSQQQLRPSSTPGVLGQ 376
>gb|OUZ99223.1| hypothetical protein BVC80_8967g31 [Macleaya cordata]
Length = 521
Score = 72.8 bits (177), Expect = 4e-11
Identities = 42/72 (58%), Positives = 45/72 (62%), Gaps = 10/72 (13%)
Frame = +1
Query: 388 YIKEAPRVGSASSKNLN--------TGPQLIGRSVPSPSGAP--VSFDNVSTPPLPYVNS 537
Y K P S S N N TG QLIGRS+PSPSGA SFDN +T PLPY NS
Sbjct: 264 YAKNTPT--SLPSNNTNSQGAVPQSTGAQLIGRSIPSPSGAVGVTSFDNTTTSPLPYANS 321
Query: 538 PRSGTNMMNMPS 573
PRSGTN+MN PS
Sbjct: 322 PRSGTNIMNTPS 333
>ref|XP_022723674.1| mediator of RNA polymerase II transcription subunit 8-like isoform
X2 [Durio zibethinus]
Length = 472
Score = 70.9 bits (172), Expect = 2e-10
Identities = 41/76 (53%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Frame = +1
Query: 364 SFLATMEEYIKEAP----RVGSASSKNLNTGPQLIGRSVPSPSGAP--VSFDNVSTPPLP 525
SF + Y+K P GS S TG QLIGRS SPS A SFDN + PLP
Sbjct: 247 SFADSSGMYMKNTPLTSNNTGSQGSLLQATGAQLIGRSAASPSAATSATSFDNTTNSPLP 306
Query: 526 YVNSPRSGTNMMNMPS 573
Y NSPRSGTN+MNMPS
Sbjct: 307 YANSPRSGTNIMNMPS 322
>ref|XP_022723673.1| mediator of RNA polymerase II transcription subunit 8-like isoform
X1 [Durio zibethinus]
Length = 540
Score = 70.9 bits (172), Expect = 2e-10
Identities = 41/76 (53%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Frame = +1
Query: 364 SFLATMEEYIKEAP----RVGSASSKNLNTGPQLIGRSVPSPSGAP--VSFDNVSTPPLP 525
SF + Y+K P GS S TG QLIGRS SPS A SFDN + PLP
Sbjct: 247 SFADSSGMYMKNTPLTSNNTGSQGSLLQATGAQLIGRSAASPSAATSATSFDNTTNSPLP 306
Query: 526 YVNSPRSGTNMMNMPS 573
Y NSPRSGTN+MNMPS
Sbjct: 307 YANSPRSGTNIMNMPS 322
>gb|ONM57007.1| Mediator of RNA polymerase II transcription subunit 8 [Zea mays]
Length = 251
Score = 68.6 bits (166), Expect = 3e-10
Identities = 44/95 (46%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +1
Query: 409 VGSASSKNLNTGPQLIGRSVPSP--SGAPVSFDNVSTPPLPYVNSPRSGTNMMNMPSXXX 582
V S ++ +G QL+GR PSP +G P +F+NVSTPP+PY NSPRSGTNMMN PS
Sbjct: 130 VNSQGNQIQASGGQLLGRPAPSPGTTGTP-NFENVSTPPMPYANSPRSGTNMMNTPSPQQ 188
Query: 583 XXXXXXXXXXXXXXXXXLLAHQQLRKSATAGVLGQ 687
L HQ +R SA AG+L Q
Sbjct: 189 HLTPQQQRQKLMQHSQPL--HQPVRPSA-AGMLAQ 220
>gb|KQL25696.1| hypothetical protein SETIT_029396mg [Setaria italica]
Length = 397
Score = 69.7 bits (169), Expect = 3e-10
Identities = 43/86 (50%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = +1
Query: 439 TGPQLIGRSVPSPSGAPV-SFDNVSTPPLPYVNSPRSGTNMMNMPS--XXXXXXXXXXXX 609
+G QL+GR PSP G +F+NVSTPP+PY NSPRSGTNMMN PS
Sbjct: 284 SGGQLLGRPAPSPGGTGTPNFENVSTPPMPYANSPRSGTNMMNTPSPQQHLTPQQQRQKL 343
Query: 610 XXXXXXXXLLAHQQLRKSATAGVLGQ 687
L A QQLR SA AG+L Q
Sbjct: 344 IQASQQQQLHAQQQLRPSA-AGMLAQ 368