BLASTX nr result

ID: Ophiopogon23_contig00007157 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00007157
         (449 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020243632.1| postreplication repair E3 ubiquitin-protein ...   112   2e-26

>ref|XP_020243632.1| postreplication repair E3 ubiquitin-protein ligase RAD18-like
           [Asparagus officinalis]
 gb|ONK79953.1| uncharacterized protein A4U43_C01F12180 [Asparagus officinalis]
          Length = 398

 Score =  112 bits (279), Expect = 2e-26
 Identities = 70/126 (55%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
 Frame = -1

Query: 386 ENLFEPFDLPSYG-YIPPIPVPSEDRRNNALNSVPYSASLTFDNEPLARTGGXXXXXXXX 210
           ENLFEPFDLP Y   IPP          NALNS+PYS SL FDNEPLARTG         
Sbjct: 53  ENLFEPFDLPPYNDEIPP---------QNALNSIPYSPSLMFDNEPLARTGEPRLHQDLL 103

Query: 209 XXXEIRFQRLIESRDRWEM---XXXXXXXXXXXXXXXXDPERLMRDIRRSGRLVGSIGKH 39
              E+RF RL ESR+R EM                   DPERLMRDIRRSGR +GSIGKH
Sbjct: 104 QCPELRFHRLFESRERLEMARTRSNQDGSNQSNEPLSTDPERLMRDIRRSGRFLGSIGKH 163

Query: 38  KAADMA 21
           KAAD A
Sbjct: 164 KAADKA 169


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