BLASTX nr result

ID: Ophiopogon23_contig00006982 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00006982
         (525 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273885.1| LOW QUALITY PROTEIN: thylakoidal processing ...    92   1e-18
gb|ONK64890.1| uncharacterized protein A4U43_C07F31140 [Asparagu...    92   2e-18

>ref|XP_020273885.1| LOW QUALITY PROTEIN: thylakoidal processing peptidase 1,
           chloroplastic-like [Asparagus officinalis]
          Length = 408

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 64/139 (46%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
 Frame = +2

Query: 2   QRLDDDPNLARSRVRDPR-DRGK---PPPSSKASTLAGDR-------KPKAQATHSPA-- 142
           QRLDDDPN+ +SR RD   DR +    P SSK S   GDR       K KAQA H+PA  
Sbjct: 35  QRLDDDPNVTKSRARDRDWDRNRYRSKPQSSKFSCFTGDRTRSTAQEKSKAQA-HAPATV 93

Query: 143 KYTTLAGSNHSVVPKGSKPASPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGGLKPPS 322
           KY+TLA       PKGS+PA+ TV                             GGLKP  
Sbjct: 94  KYSTLA-------PKGSRPANITVSLISAVVSGSGAGSNVGLGVFGVSSSIGLGGLKPSY 146

Query: 323 FLPFLQGNKWFPCSEFTAG 379
           FLPFLQ NKWFPCSEF  G
Sbjct: 147 FLPFLQPNKWFPCSEFVPG 165


>gb|ONK64890.1| uncharacterized protein A4U43_C07F31140 [Asparagus officinalis]
          Length = 601

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 64/139 (46%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
 Frame = +2

Query: 2   QRLDDDPNLARSRVRDPR-DRGK---PPPSSKASTLAGDR-------KPKAQATHSPA-- 142
           QRLDDDPN+ +SR RD   DR +    P SSK S   GDR       K KAQA H+PA  
Sbjct: 131 QRLDDDPNVTKSRARDRDWDRNRYRSKPQSSKFSCFTGDRTRSTAQEKSKAQA-HAPATV 189

Query: 143 KYTTLAGSNHSVVPKGSKPASPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGGLKPPS 322
           KY+TLA       PKGS+PA+ TV                             GGLKP  
Sbjct: 190 KYSTLA-------PKGSRPANITVSLISAVVSGSGAGSNVGLGVFGVSSSIGLGGLKPSY 242

Query: 323 FLPFLQGNKWFPCSEFTAG 379
           FLPFLQ NKWFPCSEF  G
Sbjct: 243 FLPFLQPNKWFPCSEFVPG 261


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