BLASTX nr result

ID: Ophiopogon23_contig00006934 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00006934
         (448 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020255162.1| photosynthetic NDH subunit of lumenal locati...    57   9e-07

>ref|XP_020255162.1| photosynthetic NDH subunit of lumenal location 3, chloroplastic
           [Asparagus officinalis]
          Length = 217

 Score = 56.6 bits (135), Expect = 9e-07
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = -1

Query: 448 EKLEDAVKKKSDPSTRSIYDETTVVLKEVMARMA 347
           EKLEDAVK+KSDP TRS Y +TTVVL+EVMARMA
Sbjct: 184 EKLEDAVKQKSDPLTRSCYHDTTVVLQEVMARMA 217


Top