BLASTX nr result
ID: Ophiopogon23_contig00006569
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00006569
(1330 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD93802.1| RNA polymerase beta chain, partial (chloroplast) ... 692 0.0
gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophio... 709 0.0
gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Lirio... 707 0.0
gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasyl... 697 0.0
gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beauc... 696 0.0
ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [... 696 0.0
ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [... 692 0.0
gb|ABD93844.1| RNA polymerase beta chain, partial (chloroplast) ... 670 0.0
gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscu... 688 0.0
ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [N... 687 0.0
gb|AEX94835.1| RNA polymerase beta' subunit (chloroplast) [Sanse... 684 0.0
ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [... 684 0.0
gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maian... 683 0.0
gb|ABD93833.1| RNA polymerase beta chain, partial (chloroplast) ... 664 0.0
ref|YP_009335154.1| RNA polymerase beta subunit (chloroplast) [H... 681 0.0
ref|YP_009045556.1| RNA polymerase betasubunit (chloroplast) [Cy... 679 0.0
ref|YP_009432631.1| RNA polymerase beta' subunit (chloroplast) [... 678 0.0
ref|YP_009335578.1| RNA polymerase beta subunit (chloroplast) [Y... 676 0.0
ref|YP_009334818.1| RNA polymerase beta subunit (chloroplast) [H... 676 0.0
ref|YP_009335069.1| RNA polymerase beta subunit (chloroplast) [H... 674 0.0
>gb|ABD93802.1| RNA polymerase beta chain, partial (chloroplast) [Beaucarnea
recurvata]
Length = 830
Score = 692 bits (1787), Expect = 0.0
Identities = 339/351 (96%), Positives = 343/351 (97%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+NWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG
Sbjct: 287 KNWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 346
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 347 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKST 406
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYT KRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVT+HQGTIGTLLNRNKEGQSL I
Sbjct: 407 ISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTKHQGTIGTLLNRNKEGQSLRI 466
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCFRV PFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIV FYSSYHLITHNQIL
Sbjct: 467 LSSFNCFRVVPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVKFYSSYHLITHNQIL 526
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYW+LDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET
Sbjct: 527 LNKYWVLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 586
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
ST ISIGQF CENICLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 587 STIISIGQFICENICLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGA 637
>gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophiopogon japonicus]
Length = 1381
Score = 709 bits (1831), Expect = 0.0
Identities = 347/351 (98%), Positives = 348/351 (99%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+NWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG
Sbjct: 758 KNWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 817
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 818 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKST 877
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYT KRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII
Sbjct: 878 ISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 937
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL
Sbjct: 938 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET
Sbjct: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1057
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
STTISIGQFFCENICLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 1058 STTISIGQFFCENICLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGA 1108
>gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Liriope spicata]
Length = 1385
Score = 707 bits (1824), Expect = 0.0
Identities = 346/351 (98%), Positives = 347/351 (98%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+NWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG
Sbjct: 762 KNWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 821
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 822 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKST 881
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYT KRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL I
Sbjct: 882 ISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRI 941
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL
Sbjct: 942 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 1001
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET
Sbjct: 1002 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1061
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
STTISIGQFFCENICLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 1062 STTISIGQFFCENICLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGA 1112
>gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasylirion wheeleri]
Length = 1385
Score = 697 bits (1800), Expect = 0.0
Identities = 342/351 (97%), Positives = 344/351 (98%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+NWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG
Sbjct: 762 KNWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 821
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 822 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKST 881
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYT KRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL I
Sbjct: 882 ISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRI 941
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCFRV PFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIVNFYSSYHLITHNQIL
Sbjct: 942 LSSFNCFRVVPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVNFYSSYHLITHNQIL 1001
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET
Sbjct: 1002 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1061
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
ST ISIGQF CENICLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 1062 STIISIGQFICENICLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGA 1112
>gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beaucarnea hookeri]
Length = 1385
Score = 696 bits (1796), Expect = 0.0
Identities = 341/351 (97%), Positives = 344/351 (98%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+NWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG
Sbjct: 762 KNWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 821
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 822 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKST 881
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYT KRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVT+HQGTIGTLLNRNKEGQSL I
Sbjct: 882 ISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTKHQGTIGTLLNRNKEGQSLRI 941
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCFRV PFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIVNFYSSYHLITHNQIL
Sbjct: 942 LSSFNCFRVVPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVNFYSSYHLITHNQIL 1001
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET
Sbjct: 1002 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1061
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
ST ISIGQF CENICLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 1062 STIISIGQFICENICLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGA 1112
>ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
verticillatum]
ref|YP_009236350.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
sibiricum]
gb|ALM87707.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
verticillatum]
gb|AMF84063.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
sibiricum]
Length = 1382
Score = 696 bits (1795), Expect = 0.0
Identities = 341/351 (97%), Positives = 344/351 (98%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+N IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG
Sbjct: 759 KNGIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 818
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 819 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKST 878
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL I
Sbjct: 879 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRI 938
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCFRVGPFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIVNFYSSYHLITHNQIL
Sbjct: 939 LSSFNCFRVGPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVNFYSSYHLITHNQIL 998
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET
Sbjct: 999 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1058
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
ST ISIGQF CENICLFKYGP I+KSGQI IVHVDSLIIRSAKPYLATPGA
Sbjct: 1059 STIISIGQFICENICLFKYGPHIQKSGQIFIVHVDSLIIRSAKPYLATPGA 1109
>ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum stenophyllum]
gb|ATB18548.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum stenophyllum]
Length = 1381
Score = 692 bits (1787), Expect = 0.0
Identities = 339/351 (96%), Positives = 342/351 (97%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+NWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG
Sbjct: 758 KNWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 817
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGIYHTSIQLVRTCLVLNWDQEKN SMEEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 818 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNSSMEEVHASFVEVRANDLIRDFIRIELVKST 877
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYT KRYDTAGSGLIPDNGLDRTNINPFYSKVKI LVTQHQGTIGTLLNRNKEGQSL I
Sbjct: 878 ISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKISLVTQHQGTIGTLLNRNKEGQSLRI 937
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCFRVGPFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIVNFYSSYHLITHNQIL
Sbjct: 938 LSSFNCFRVGPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWLLDNFKQTF+VLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET
Sbjct: 998 LNKYWLLDNFKQTFKVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1057
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
ST ISIGQF CENICLFKYGP IKKSGQI IVHVDSLIIRSAKPYLATPGA
Sbjct: 1058 STIISIGQFICENICLFKYGPHIKKSGQIFIVHVDSLIIRSAKPYLATPGA 1108
>gb|ABD93844.1| RNA polymerase beta chain, partial (chloroplast) [Agave attenuata]
Length = 761
Score = 670 bits (1728), Expect = 0.0
Identities = 329/352 (93%), Positives = 337/352 (95%)
Frame = +2
Query: 275 IENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILY 454
++N IYVQRITP KKKYFVLVRPVVTYEIADGINL KLFPQDLLQEK+NVQLRVVNYILY
Sbjct: 219 LKNGIYVQRITPTKKKYFVLVRPVVTYEIADGINLEKLFPQDLLQEKDNVQLRVVNYILY 278
Query: 455 GNGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKS 634
GNGKSIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKS
Sbjct: 279 GNGKSIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKS 338
Query: 635 TISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLI 814
TISYT KRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLI
Sbjct: 339 TISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLI 398
Query: 815 ILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQI 994
ILSSFNCFRVGPFNGSKY++ AKESNPITPI+ LLGPLGTIVPKIVNFYSSYHLITHNQI
Sbjct: 399 ILSSFNCFRVGPFNGSKYHDAAKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITHNQI 458
Query: 995 LLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEE 1174
LLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCNNIILNP HLNWCFLHYNYCEE
Sbjct: 459 LLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCNNIILNPFHLNWCFLHYNYCEE 518
Query: 1175 TSTTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
TST ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 519 TSTIISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 570
>gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscus aculeatus]
Length = 1387
Score = 688 bits (1776), Expect = 0.0
Identities = 338/351 (96%), Positives = 340/351 (96%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+N IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG
Sbjct: 762 KNGIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 821
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 822 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKST 881
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYTEKRYD GSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL I
Sbjct: 882 ISYTEKRYDMTGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRI 941
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCFRVGPFNGSKYNNV KESNPITPI+GLLGPLG IVPKIVNFYSSYHLITHNQIL
Sbjct: 942 LSSFNCFRVGPFNGSKYNNVTKESNPITPIRGLLGPLGIIVPKIVNFYSSYHLITHNQIL 1001
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET
Sbjct: 1002 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1061
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
ST ISIGQF CEN CLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 1062 STIISIGQFICENRCLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGA 1112
>ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
gb|AEZ49490.1| RNA polymerase beta'' subunit, partial (plastid) [Nolina atopocarpa]
gb|APO12381.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
Length = 1385
Score = 687 bits (1773), Expect = 0.0
Identities = 339/351 (96%), Positives = 341/351 (97%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+N IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG
Sbjct: 762 KNGIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 821
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIR IYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 822 NGKSIREIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKST 881
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYT KRYD AGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL I
Sbjct: 882 ISYTGKRYDMAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRI 941
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCFRV PFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIVNFYSSYHLITHNQIL
Sbjct: 942 LSSFNCFRVVPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVNFYSSYHLITHNQIL 1001
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET
Sbjct: 1002 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1061
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
ST ISIGQF CENICLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 1062 STIISIGQFICENICLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGA 1112
>gb|AEX94835.1| RNA polymerase beta' subunit (chloroplast) [Sansevieria trifasciata]
Length = 1384
Score = 684 bits (1766), Expect = 0.0
Identities = 334/351 (95%), Positives = 340/351 (96%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+NWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG
Sbjct: 759 KNWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 818
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGIYHTSIQLVRTCLVLNW+QEKNGSMEEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 819 NGKSIRGIYHTSIQLVRTCLVLNWNQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKST 878
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYT KRYDTAGSGLIPDN LDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL I
Sbjct: 879 ISYTGKRYDTAGSGLIPDNRLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRI 938
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCF VGPFNGSKYNNV KESNPITPI+GLLGPLGTIVPKIVNFYSSYHLITHNQIL
Sbjct: 939 LSSFNCFGVGPFNGSKYNNVVKESNPITPIRGLLGPLGTIVPKIVNFYSSYHLITHNQIL 998
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWL DNFKQTFQVL+VLKYCLIDEN+RIYNPSPCNNIILNPSHLNWCFLHYNYCE+T
Sbjct: 999 LNKYWLFDNFKQTFQVLQVLKYCLIDENKRIYNPSPCNNIILNPSHLNWCFLHYNYCEKT 1058
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
T ISIGQF CENICLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 1059 PTIISIGQFICENICLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGA 1109
>ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
gb|ASW26644.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
Length = 1381
Score = 684 bits (1765), Expect = 0.0
Identities = 338/351 (96%), Positives = 341/351 (97%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+N IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG
Sbjct: 758 KNGIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 817
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 818 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKST 877
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYT KRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL I
Sbjct: 878 ISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRI 937
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCFRVGPFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIVNF SSYHLITHNQIL
Sbjct: 938 LSSFNCFRVGPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVNFSSSYHLITHNQIL 997
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSP NNIILNPSHLNWCFLHYNYCEET
Sbjct: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPSNNIILNPSHLNWCFLHYNYCEET 1057
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
ST ISIGQF CENI +FKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 1058 STIISIGQFICENISIFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGA 1108
>gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum stellatum]
Length = 1385
Score = 683 bits (1763), Expect = 0.0
Identities = 337/351 (96%), Positives = 341/351 (97%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+N IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLF QDLLQEKENVQLRVVNYILYG
Sbjct: 762 KNGIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFSQDLLQEKENVQLRVVNYILYG 821
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 822 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKST 881
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYT KRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL I
Sbjct: 882 ISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRI 941
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCFRVGPFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIVNFYSSYHLITHNQIL
Sbjct: 942 LSSFNCFRVGPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVNFYSSYHLITHNQIL 1001
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSP NNIILNPSHLNWCFLHYNYCEET
Sbjct: 1002 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPWNNIILNPSHLNWCFLHYNYCEET 1061
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
ST ISIGQF CENI +FKYGP IKKSGQI+IVHVDSLIIRSAKPYLATPGA
Sbjct: 1062 STIISIGQFICENISIFKYGPHIKKSGQIIIVHVDSLIIRSAKPYLATPGA 1112
>gb|ABD93833.1| RNA polymerase beta chain, partial (chloroplast) [Xanthorrhoea
quadrangulata]
Length = 811
Score = 664 bits (1714), Expect = 0.0
Identities = 324/351 (92%), Positives = 332/351 (94%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+NWIYVQRITP KKKYFVLVRPVVTYEIADGIN AKLFPQDLLQEK+NVQLRVVNYILYG
Sbjct: 261 QNWIYVQRITPTKKKYFVLVRPVVTYEIADGINFAKLFPQDLLQEKDNVQLRVVNYILYG 320
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 321 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKST 380
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYT KRYDTAGSGLIP+NGLDRTNINPFYSK KIPL TQHQGTIGTLLNRNKE QSLII
Sbjct: 381 ISYTGKRYDTAGSGLIPENGLDRTNINPFYSKAKIPLFTQHQGTIGTLLNRNKECQSLII 440
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNC RVGPFNGSKYNNV KESNPITPI+ LLGPLGTIVPKIVNFYSSYHLITHNQIL
Sbjct: 441 LSSFNCSRVGPFNGSKYNNVTKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITHNQIL 500
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWLLDNFKQ FQVLEV KYCLIDENRRIYNP PCNNIILNP HLNWCFL++NYCEET
Sbjct: 501 LNKYWLLDNFKQIFQVLEVFKYCLIDENRRIYNPGPCNNIILNPLHLNWCFLYHNYCEET 560
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
ST ISIGQF CENICLFKYGP IKKSGQI IVHVDSL+IRSAKPYLAT GA
Sbjct: 561 STIISIGQFICENICLFKYGPHIKKSGQIFIVHVDSLVIRSAKPYLATLGA 611
>ref|YP_009335154.1| RNA polymerase beta subunit (chloroplast) [Hosta ventricosa]
gb|AEX94804.1| RNA polymerase beta' subunit (chloroplast) [Hosta ventricosa]
gb|APO12212.1| RNA polymerase beta subunit (chloroplast) [Hosta ventricosa]
Length = 1384
Score = 681 bits (1758), Expect = 0.0
Identities = 334/351 (95%), Positives = 339/351 (96%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+NWIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+NVQLRVVNYILYG
Sbjct: 759 KNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKDNVQLRVVNYILYG 818
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 819 NGKSIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKST 878
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYT KRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLII
Sbjct: 879 ISYTVKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLII 938
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCFRVGPFNGSKYNNVAKESNPITPI+ LLGPLGTIVPKIVNFYSSYHLITHNQIL
Sbjct: 939 LSSFNCFRVGPFNGSKYNNVAKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITHNQIL 998
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCNNIILNP HLNWCFLHYNYCEET
Sbjct: 999 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCNNIILNPFHLNWCFLHYNYCEET 1058
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
ST ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 1059 STIISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1109
>ref|YP_009045556.1| RNA polymerase betasubunit (chloroplast) [Cypripedium macranthos]
gb|AHI16739.1| RNA polymerase betasubunit (chloroplast) (chloroplast) [Cypripedium
macranthos]
Length = 1380
Score = 679 bits (1751), Expect = 0.0
Identities = 333/351 (94%), Positives = 338/351 (96%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+NWIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+NVQLRVVNYILYG
Sbjct: 755 KNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKDNVQLRVVNYILYG 814
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 815 NGKSIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKST 874
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYT KRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLII
Sbjct: 875 ISYTVKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLII 934
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCFRVGPFNGSKYNNVAKESNPITPI+ LLGPLGTIVPKIVNFYSSYHLITHNQIL
Sbjct: 935 LSSFNCFRVGPFNGSKYNNVAKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITHNQIL 994
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCNNIILNP HLNWCF HYNYCEET
Sbjct: 995 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCNNIILNPFHLNWCFPHYNYCEET 1054
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
ST ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 1055 STIISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1105
>ref|YP_009432631.1| RNA polymerase beta' subunit (chloroplast) [Hosta minor]
gb|ATB18912.1| RNA polymerase beta' subunit (chloroplast) [Hosta minor]
Length = 1380
Score = 678 bits (1750), Expect = 0.0
Identities = 333/351 (94%), Positives = 338/351 (96%)
Frame = +2
Query: 278 ENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYG 457
+NWIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+NVQLRVVNYILYG
Sbjct: 755 KNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKDNVQLRVVNYILYG 814
Query: 458 NGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKST 637
NGKSIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKST
Sbjct: 815 NGKSIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKST 874
Query: 638 ISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLII 817
ISYT KRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLII
Sbjct: 875 ISYTVKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLII 934
Query: 818 LSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQIL 997
LSSFNCFRVGPFNGSKYNNVAKESNPITPI+ LLGPLGTIVPKIVNFYSSYHLITHNQIL
Sbjct: 935 LSSFNCFRVGPFNGSKYNNVAKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITHNQIL 994
Query: 998 LNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEET 1177
LNKYWLL NFKQTFQVLEVLKYCLIDENRRIYNP PCNNIILNP HLNWCFLHYNYCEET
Sbjct: 995 LNKYWLLANFKQTFQVLEVLKYCLIDENRRIYNPGPCNNIILNPFHLNWCFLHYNYCEET 1054
Query: 1178 STTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
ST ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 1055 STIISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1105
>ref|YP_009335578.1| RNA polymerase beta subunit (chloroplast) [Yucca brevifolia]
ref|YP_009335748.1| RNA polymerase beta subunit (chloroplast) [Yucca queretaroensis]
ref|YP_009335833.1| RNA polymerase beta subunit (chloroplast) [Yucca schidigera]
gb|AAZ03984.1| RNA polymerase beta'' chain, partial (chloroplast) [Yucca schidigera]
gb|APO12722.1| RNA polymerase beta subunit (chloroplast) [Yucca brevifolia]
gb|APO12892.1| RNA polymerase beta subunit (chloroplast) [Yucca queretaroensis]
gb|APO12977.1| RNA polymerase beta subunit (chloroplast) [Yucca schidigera]
Length = 1384
Score = 676 bits (1745), Expect = 0.0
Identities = 333/352 (94%), Positives = 338/352 (96%)
Frame = +2
Query: 275 IENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILY 454
++N IYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILY
Sbjct: 758 LKNGIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILY 817
Query: 455 GNGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKS 634
GNGKSIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKS
Sbjct: 818 GNGKSIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKS 877
Query: 635 TISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLI 814
TISYT KRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLI
Sbjct: 878 TISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLI 937
Query: 815 ILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQI 994
ILSSFNCFRVGPFNG KYNNVAKESNPITPI+ LLGPLGTIVPKIVNFYSSYHLITHNQI
Sbjct: 938 ILSSFNCFRVGPFNGPKYNNVAKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITHNQI 997
Query: 995 LLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEE 1174
LLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCNNIILNP HLNWCFLHYNYCEE
Sbjct: 998 LLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCNNIILNPFHLNWCFLHYNYCEE 1057
Query: 1175 TSTTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
TST ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 1058 TSTIISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1109
>ref|YP_009334818.1| RNA polymerase beta subunit (chloroplast) [Hesperaloe campanulata]
gb|APO11876.1| RNA polymerase beta subunit (chloroplast) [Hesperaloe campanulata]
Length = 1384
Score = 676 bits (1743), Expect = 0.0
Identities = 331/352 (94%), Positives = 338/352 (96%)
Frame = +2
Query: 275 IENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILY 454
++NWIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+NVQLRVVNYILY
Sbjct: 758 LKNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKDNVQLRVVNYILY 817
Query: 455 GNGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKS 634
GNGKSIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKS
Sbjct: 818 GNGKSIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKS 877
Query: 635 TISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLI 814
TISYT KRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLI
Sbjct: 878 TISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLI 937
Query: 815 ILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQI 994
ILSSFNCFRVGPFNGSKYNNVAKESNPITPI+ LLGPLGTIVPKIVNFYSSYHLIT NQI
Sbjct: 938 ILSSFNCFRVGPFNGSKYNNVAKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITQNQI 997
Query: 995 LLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEE 1174
LLNKYWLLDNFKQTFQ+LEVLKYCLIDENRRIYNP PCNNIILNP LNWCFLHYNYCEE
Sbjct: 998 LLNKYWLLDNFKQTFQILEVLKYCLIDENRRIYNPGPCNNIILNPFRLNWCFLHYNYCEE 1057
Query: 1175 TSTTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
TST ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 1058 TSTIISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1109
>ref|YP_009335069.1| RNA polymerase beta subunit (chloroplast) [Hesperoyucca whipplei]
gb|APO12127.1| RNA polymerase beta subunit (chloroplast) [Hesperoyucca whipplei]
Length = 1384
Score = 674 bits (1740), Expect = 0.0
Identities = 331/352 (94%), Positives = 337/352 (95%)
Frame = +2
Query: 275 IENWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILY 454
++NWIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+NVQLRVVNYILY
Sbjct: 758 LKNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKDNVQLRVVNYILY 817
Query: 455 GNGKSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKS 634
GNGKSIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKS
Sbjct: 818 GNGKSIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKS 877
Query: 635 TISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLI 814
TISYT KRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLI
Sbjct: 878 TISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLI 937
Query: 815 ILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQI 994
ILSSFNCFRVGPFNGSKYNN AKESNPITPI+ LLGPLGTIVPKIVNFYSSY LITHNQI
Sbjct: 938 ILSSFNCFRVGPFNGSKYNNAAKESNPITPIRDLLGPLGTIVPKIVNFYSSYRLITHNQI 997
Query: 995 LLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEE 1174
LLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCNNIILNP LNWCFLHYNYCEE
Sbjct: 998 LLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCNNIILNPFRLNWCFLHYNYCEE 1057
Query: 1175 TSTTISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1330
TST ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA
Sbjct: 1058 TSTIISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGA 1109