BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00005224
         (575 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO55593.1| reverse transcriptase [Corchorus capsularis]           225   9e-65
gb|PRQ45918.1| putative nucleotidyltransferase, Ribonuclease H [...   213   2e-61
gb|OMO91869.1| reverse transcriptase [Corchorus capsularis]           214   1e-60
gb|PKU84042.1| hypothetical protein MA16_Dca010326 [Dendrobium c...   201   2e-60
gb|OMO58913.1| reverse transcriptase [Corchorus capsularis]           212   4e-60
gb|EOY03075.1| CCHC-type integrase [Theobroma cacao]                  192   3e-58
emb|CAA73042.1| polyprotein, partial [Ananas comosus]                 204   8e-58
gb|OMO65120.1| reverse transcriptase [Corchorus capsularis]           203   1e-57
gb|PRQ46594.1| putative nucleotidyltransferase, Ribonuclease H [...   204   2e-57
emb|CAJ65807.1| polyprotein, partial [Citrus sinensis]                197   5e-57
gb|EOY20325.1| Retrotransposon protein, Ty3-gypsy subclass, puta...   193   2e-56
emb|CAE02080.2| OSJNBa0074B10.8 [Oryza sativa Japonica Group]         191   3e-56
gb|PKU70915.1| hypothetical protein MA16_Dca021034 [Dendrobium c...   190   4e-56
emb|CAE03840.1| OSJNBb0013J13.17 [Oryza sativa Japonica Group]        199   7e-56
emb|CAJ86189.1| H0306F03.2 [Oryza sativa]                             199   1e-55
gb|AAY23262.1| retrotransposon protein, putative, Ty3-gypsy sub-...   199   1e-55
gb|ABA95262.1| retrotransposon protein, putative, Ty3-gypsy subc...   199   1e-55
gb|AAX93001.1| retrotransposon protein, putative, Ty3-gypsy sub-...   199   1e-55
gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group...   199   1e-55
gb|AAP53894.1| retrotransposon protein, putative, Ty3-gypsy subc...   199   1e-55

>gb|OMO55593.1| reverse transcriptase [Corchorus capsularis]
          Length = 1385

 Score =  225 bits (574), Expect = 9e-65
 Identities = 100/192 (52%), Positives = 145/192 (75%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1    VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
            + + YHPGKANVV DALSR++  NLA  +T Q+ ++ ++ +++I V R+  T+G + +++
Sbjct: 872  LTISYHPGKANVVADALSRKNHGNLAALLTSQRSILDDLRRMEIGV-RKHGTEGMLASLR 930

Query: 181  IQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVPKG-EVRDEV 357
            IQP L+E+I+EAQ  D  LQ+ R  +E G+  DF+I  DG++ FD+R+CVP   E++  +
Sbjct: 931  IQPTLIERIKEAQLVDSALQKVRANIETGVPSDFRIHDDGSLRFDDRLCVPNDVEIKKVI 990

Query: 358  LAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQ 537
            L EAH S Y++HPGGTKMY+DLK+ +WWN MKREI  +V++C+VCQQVK EHQ+P G LQ
Sbjct: 991  LDEAHYSGYTVHPGGTKMYRDLKETYWWNNMKREIGEFVAQCIVCQQVKVEHQRPAGQLQ 1050

Query: 538  PLPIPEWKWDKV 573
            PLPIPEWKW+ +
Sbjct: 1051 PLPIPEWKWEHI 1062


>gb|PRQ45918.1| putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]
          Length = 815

 Score =  213 bits (543), Expect = 2e-61
 Identities = 102/196 (52%), Positives = 140/196 (71%), Gaps = 7/196 (3%)
 Frame = +1

Query: 7   LQYHPGKANVVPDALSRRS------EWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQI 168
           ++YHPG+ANVV DALSR++        +L++  T +  L+ E+    + +    +    I
Sbjct: 273 IEYHPGRANVVADALSRKTYPSLLPSPSLSHMRTVRVPLLYELRATGVSLEGTDEFAALI 332

Query: 169 MNMQIQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVPK-GEV 345
            +  ++PIL++K+REAQ  D  LQ+ R+ VE G R DF +R DGA+ F NRICVPK  ++
Sbjct: 333 ASFHVRPILIDKVREAQLHDEALQEVREAVENGAREDFIVRGDGALMFGNRICVPKQDDL 392

Query: 346 RDEVLAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPP 525
           + E+L EAHSS Y++HPGGTKMY+ LK+++WW+ MKREIA YV +CLVCQQVKAE QKP 
Sbjct: 393 KQEILEEAHSSPYAMHPGGTKMYRTLKEYYWWSNMKREIADYVRRCLVCQQVKAERQKPS 452

Query: 526 GLLQPLPIPEWKWDKV 573
           GLLQPLPIPEWKW+ +
Sbjct: 453 GLLQPLPIPEWKWEHI 468


>gb|OMO91869.1| reverse transcriptase [Corchorus capsularis]
          Length = 1401

 Score =  214 bits (544), Expect = 1e-60
 Identities = 103/192 (53%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1    VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
            +++ YHPGKANVV DALSR+S  ++A  IT Q+ L++E+    I VV + +    + ++ 
Sbjct: 927  LSINYHPGKANVVVDALSRKSTGSMAALITTQRRLLEELDGEQIEVVMQGEGV-LLASLV 985

Query: 181  IQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVPKGEV-RDEV 357
            +QP L+E+I+ AQ  D  L + ++ VE GL+ DF I  DG + F +R+CVP   V + E+
Sbjct: 986  VQPSLIERIKVAQKDDLELCRIKEDVENGLKTDFNIHIDGTLQFGSRLCVPNDFVLKREI 1045

Query: 358  LAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQ 537
            L EAH S ++IHPGGTKMY+DLK++FWWN MKREIA++VS+CLVCQQVKAEHQ+P GLLQ
Sbjct: 1046 LEEAHGSRFTIHPGGTKMYKDLKENFWWNNMKREIAQFVSQCLVCQQVKAEHQRPSGLLQ 1105

Query: 538  PLPIPEWKWDKV 573
            PL IPEWKW+ +
Sbjct: 1106 PLEIPEWKWEHI 1117


>gb|PKU84042.1| hypothetical protein MA16_Dca010326 [Dendrobium catenatum]
          Length = 378

 Score =  201 bits (512), Expect = 2e-60
 Identities = 98/193 (50%), Positives = 134/193 (69%), Gaps = 2/193 (1%)
 Frame = +1

Query: 1   VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
           +++QYHPGKANVV DALSR++  +  + ITQQ+ELI+++ KL+I VV+ +D +   +N  
Sbjct: 81  LDIQYHPGKANVVADALSRKNSGSANWMITQQQELIRDLEKLEISVVQPNDAEIIRLNQT 140

Query: 181 I-QPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVPK-GEVRDE 354
           I      E++REA   D   ++  D V  G   DF++  +G + +  R+C+P   ++R E
Sbjct: 141 IIMSTFPERVREALPLDADFKKILDMVSVGHIEDFELDGEGLLRYKGRLCIPDVDDLRKE 200

Query: 355 VLAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLL 534
           VL EAH S+Y+IHPG  KMYQDLK+ FWW GMKR +A  VSKC+ CQ VKAEHQKP G L
Sbjct: 201 VLQEAHYSSYTIHPGSNKMYQDLKEVFWWPGMKRSVADTVSKCISCQMVKAEHQKPGGFL 260

Query: 535 QPLPIPEWKWDKV 573
           QPLPIPEWKW+ +
Sbjct: 261 QPLPIPEWKWEDI 273


>gb|OMO58913.1| reverse transcriptase [Corchorus capsularis]
          Length = 1477

 Score =  212 bits (539), Expect = 4e-60
 Identities = 97/192 (50%), Positives = 141/192 (73%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1    VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
            + + YHPGKANVV DALSR++  NLA  +T Q+ ++ ++ +++I V R+   +G + +++
Sbjct: 992  LTISYHPGKANVVADALSRKNHGNLAALLTSQRSILDDLRRMEIGV-RKHGIEGMLASLR 1050

Query: 181  IQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVPKG-EVRDEV 357
            IQP+L+E+I+EAQ  D  LQ+ R  +E G   DF+   DG++ F +R+CVP   E++  V
Sbjct: 1051 IQPMLIERIKEAQLVDSALQKVRANIETGAPSDFRTHDDGSLRFGDRLCVPNDVEIKKVV 1110

Query: 358  LAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQ 537
            L EAH S Y++HPGGTKMY+DLK+ +WWN MKREI   +++C+VCQQVK EHQ+P G LQ
Sbjct: 1111 LDEAHYSGYTVHPGGTKMYRDLKETYWWNNMKREIGE-LAQCIVCQQVKVEHQRPAGQLQ 1169

Query: 538  PLPIPEWKWDKV 573
            PLPIPEWKW+ +
Sbjct: 1170 PLPIPEWKWEHI 1181


>gb|EOY03075.1| CCHC-type integrase [Theobroma cacao]
          Length = 246

 Score =  192 bits (487), Expect = 3e-58
 Identities = 93/190 (48%), Positives = 133/190 (70%), Gaps = 3/190 (1%)
 Frame = +1

Query: 13  YHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRR--SDTQGQIMNMQIQ 186
           YHPGKANVV DALSR+S  +LA+    ++ L++E+  L  + VR   ++T   + + +++
Sbjct: 13  YHPGKANVVADALSRKSMGSLAHISIGRRSLVREIHSLGDIGVRLEVAETNALLAHFRVR 72

Query: 187 PILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVPKGE-VRDEVLA 363
           PIL++KI+EAQS D  + +  +  +      F    DG + +  R+ VP G+ +R E+L 
Sbjct: 73  PILMDKIKEAQSKDEFVIKALEDPQGRKGKMFTKGIDGVLRYGTRLYVPDGDGLRREILE 132

Query: 364 EAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQPL 543
           EAH +AY +HPG TKMYQDLK+ +WW G+KR++A +VSKCLVCQQVK EHQKP GLLQPL
Sbjct: 133 EAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVKVEHQKPAGLLQPL 192

Query: 544 PIPEWKWDKV 573
           P+PEWKW+ +
Sbjct: 193 PVPEWKWEHI 202


>emb|CAA73042.1| polyprotein, partial [Ananas comosus]
          Length = 871

 Score =  204 bits (519), Expect = 8e-58
 Identities = 95/192 (49%), Positives = 136/192 (70%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
           + + YHPGKANVV DALSR+S  NLA  +  Q  LI++M +L++ +V   DT  ++M + 
Sbjct: 409 LTILYHPGKANVVADALSRKSMENLAMHVVTQPRLIEQMKRLELEIVT-PDTPMRLMTLV 467

Query: 181 IQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVPKGE-VRDEV 357
           +QP LL++I+E Q+SD  LQ+ + ++  G   DF +  DG M F  RICVP    +++++
Sbjct: 468 VQPTLLDRIKEKQASDVELQKIKGKMVDGCTGDFTLDGDGLMRFRGRICVPADSGIKEDI 527

Query: 358 LAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQ 537
           L EAH + Y+IHPGGTKMY+DLK  +WW G+K+++  +V+KCL CQQVKAEH+ P G LQ
Sbjct: 528 LQEAHRAPYAIHPGGTKMYKDLKLLYWWPGIKKDVGEFVAKCLTCQQVKAEHRVPAGKLQ 587

Query: 538 PLPIPEWKWDKV 573
            LPIP WKW+K+
Sbjct: 588 SLPIPVWKWEKI 599


>gb|OMO65120.1| reverse transcriptase [Corchorus capsularis]
          Length = 833

 Score =  203 bits (517), Expect = 1e-57
 Identities = 93/192 (48%), Positives = 136/192 (70%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
           + + YHPGKANVV DALSR++  NLA  +T Q+ ++ ++  ++I V R+  T+G + +++
Sbjct: 323 LTISYHPGKANVVADALSRKNHGNLAALLTSQRSILDDLRMMEIGV-RKHGTEGMLASLR 381

Query: 181 IQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVPKG-EVRDEV 357
           IQP L+E+I+E Q  D  LQ+ R  +E     DF+I  DG++ F +R+CVP   E++  +
Sbjct: 382 IQPTLIERIKEGQLVDSTLQKVRANIETSAPSDFRIHDDGSLRFGDRLCVPNDVEIKKVI 441

Query: 358 LAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQ 537
           L EAH S Y++HPG TKMY+DLK+ +WWN  KREI  +V++C+V QQVK EHQ+P G LQ
Sbjct: 442 LDEAHYSGYTVHPGWTKMYRDLKETYWWNNKKREIGEFVAQCIVYQQVKVEHQRPAGQLQ 501

Query: 538 PLPIPEWKWDKV 573
           PLPI EWKW+ +
Sbjct: 502 PLPILEWKWEHI 513


>gb|PRQ46594.1| putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]
          Length = 1571

 Score =  204 bits (520), Expect = 2e-57
 Identities = 98/189 (51%), Positives = 133/189 (70%), Gaps = 2/189 (1%)
 Frame = +1

Query: 7    LQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIM-NMQI 183
            ++YHPGKANVV DALSR     L+Y    +  L+ E+    + +    D  G ++ +  +
Sbjct: 1036 IEYHPGKANVVADALSRNPSVTLSYLRATRVPLLSELRSTGVEL--SVDEVGTLVASFHV 1093

Query: 184  QPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVPKGE-VRDEVL 360
            +P  ++KIREAQ  DPR++  ++ V  G + +F IR DG + F  R+CVP  E ++ E+L
Sbjct: 1094 RPAFIDKIREAQPLDPRIEGIKEGVRGGWQLEFSIRRDGTLMFGKRLCVPNVEALKREIL 1153

Query: 361  AEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQP 540
             EAH+SAY++HPGGTKMY+ LK+++WW  MKREIA +VSKCLVCQQVKAE QKP GLLQP
Sbjct: 1154 DEAHNSAYALHPGGTKMYRTLKEYYWWPNMKREIAAFVSKCLVCQQVKAERQKPSGLLQP 1213

Query: 541  LPIPEWKWD 567
            LPIPEWKW+
Sbjct: 1214 LPIPEWKWE 1222


>emb|CAJ65807.1| polyprotein, partial [Citrus sinensis]
          Length = 533

 Score =  197 bits (500), Expect = 5e-57
 Identities = 89/190 (46%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
 Frame = +1

Query: 7   LQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQIQ 186
           + +HPGKANVV DALSR+S  ++A+       L+ E+  L + +    + +  I N +++
Sbjct: 244 IDFHPGKANVVADALSRKSFSSIAHLRGTYMPLLIELRSLGVEL-EVDNCRALIANFRVR 302

Query: 187 PILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVPK-GEVRDEVLA 363
           P L++K+ + Q  D +L + ++ V+  LR DF +R +G +   NR+CVP   E++ E++ 
Sbjct: 303 PTLIDKVHQMQDQDLQLLKLKENVQKDLRTDFAVRDNGVLVMGNRLCVPDIKELKKEIME 362

Query: 364 EAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQPL 543
           EAH SAY++HPG TKMY+ L+ H+WW GMKREIA +VS+CLVCQQ+KAEHQ+P G  QPL
Sbjct: 363 EAHCSAYAMHPGSTKMYRTLRDHYWWQGMKREIAEFVSRCLVCQQIKAEHQRPAGFSQPL 422

Query: 544 PIPEWKWDKV 573
           PIPEWKW+ +
Sbjct: 423 PIPEWKWEHI 432


>gb|EOY20325.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
           cacao]
          Length = 460

 Score =  193 bits (491), Expect = 2e-56
 Identities = 93/190 (48%), Positives = 135/190 (71%), Gaps = 3/190 (1%)
 Frame = +1

Query: 13  YHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRR--SDTQGQIMNMQIQ 186
           YHPGKANVV DALSR+S  +LA+    ++ L++E+  L  + VR   ++T   + + +++
Sbjct: 105 YHPGKANVVADALSRKSMGSLAHISIGRRSLVREIHSLGDIGVRLEVAETNALLAHFRVR 164

Query: 187 PILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVPKGE-VRDEVLA 363
           PIL+++I+EAQS D  + +  +  +      F   +DG + +  R+ VP G+ +R E+L 
Sbjct: 165 PILMDRIKEAQSKDEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRREILE 224

Query: 364 EAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQPL 543
           EAH +AY +HPG TKMYQDLK+ +WW G+KR++A +VSKCLVCQQVKAEHQKP GLLQPL
Sbjct: 225 EAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQPL 284

Query: 544 PIPEWKWDKV 573
           P+PEWKW+ +
Sbjct: 285 PVPEWKWEHI 294


>emb|CAE02080.2| OSJNBa0074B10.8 [Oryza sativa Japonica Group]
          Length = 400

 Score =  191 bits (486), Expect = 3e-56
 Identities = 93/192 (48%), Positives = 124/192 (64%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
           + + YHPGKANVV DALSR+   N         EL KE  +L++ +V R    G +  ++
Sbjct: 81  MGIHYHPGKANVVADALSRKGYCNATEGRQLPLELCKEFERLNLGIVSR----GSVAALE 136

Query: 181 IQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVPKG-EVRDEV 357
            +P L++++RE Q +D  +Q+ +  +  G    F     G ++   RICVP   ++ D +
Sbjct: 137 AKPTLIDQVREVQINDSDIQEIKKNMRRGKAIGFLEDEQGTIWLGKRICVPDNKDLNDAI 196

Query: 358 LAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQ 537
           L EAH + YSIHPG TKMYQDLKK FWW  MKREIA YV+ C VCQ+VKAEHQKP GLLQ
Sbjct: 197 LKEAHDTLYSIHPGSTKMYQDLKKRFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 256

Query: 538 PLPIPEWKWDKV 573
           PL IPEWKW+++
Sbjct: 257 PLKIPEWKWEEI 268


>gb|PKU70915.1| hypothetical protein MA16_Dca021034 [Dendrobium catenatum]
          Length = 366

 Score =  190 bits (483), Expect = 4e-56
 Identities = 94/193 (48%), Positives = 131/193 (67%), Gaps = 2/193 (1%)
 Frame = +1

Query: 1   VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
           +++QYHPGKAN+V DALSR++  +  + ITQQ+ELI+++ KL+I VV+ SD +   +N  
Sbjct: 81  LDIQYHPGKANMVADALSRKNSGSANWMITQQQELIRDLEKLEISVVQPSDAEIIRLNQT 140

Query: 181 -IQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVPK-GEVRDE 354
            I     E+++EA   D   ++  D V  G   DF++     + +  R+C+P   ++R E
Sbjct: 141 TIMSTFPERVQEALPLDANFKKILDMVSMGHIEDFELDGKTLLRYKGRLCIPDVDDLRKE 200

Query: 355 VLAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLL 534
           VL EAH S+Y+IHPG  KMYQDLK+ FWW GMKR +A  V+K + CQ VKAEHQKP G L
Sbjct: 201 VLQEAHYSSYTIHPGSNKMYQDLKEVFWWPGMKRSVADTVAKYISCQMVKAEHQKPGGYL 260

Query: 535 QPLPIPEWKWDKV 573
           QPLPIPEWKW+ +
Sbjct: 261 QPLPIPEWKWEDI 273


>emb|CAE03840.1| OSJNBb0013J13.17 [Oryza sativa Japonica Group]
          Length = 864

 Score =  199 bits (505), Expect = 7e-56
 Identities = 96/192 (50%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1    VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
            + + YHPGKANVV DALSR++  N+A     Q+ L +E+ KL + VV+     G   ++ 
Sbjct: 480  LGIHYHPGKANVVADALSRKAYCNVAQIRPDQEHLCRELEKLRLTVVQ----SGVPASLT 535

Query: 181  IQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVP-KGEVRDEV 357
            +QP L  +IREAQ  D  +++   +++     +F I   G ++   RICVP K E+RD +
Sbjct: 536  VQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLI 595

Query: 358  LAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQ 537
            L EAH SAYSIHPG TKMYQD+K +FWW GMKR++A YV+ C +CQ+VKAEHQ+P G+LQ
Sbjct: 596  LKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGMLQ 655

Query: 538  PLPIPEWKWDKV 573
            PLPIPEWKW+++
Sbjct: 656  PLPIPEWKWEEI 667


>emb|CAJ86189.1| H0306F03.2 [Oryza sativa]
          Length = 1135

 Score =  199 bits (507), Expect = 1e-55
 Identities = 97/192 (50%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1    VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
            + + YHPGKANVV DALSR++  N+A     Q  L +E+ KL + VV+     G   ++ 
Sbjct: 601  LGIHYHPGKANVVADALSRKAYCNIAQIRPDQDRLCRELEKLRLTVVQ----SGVPASLT 656

Query: 181  IQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVP-KGEVRDEV 357
            +QP L  +IREAQ  D  +++   +++     +F I + G ++   RICVP K E+RD +
Sbjct: 657  VQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSIDNQGTVWCGPRICVPAKKELRDLI 716

Query: 358  LAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQ 537
            L EAH SAYSIHPG TKMYQD+K +FWW GMKR++A YV+ C +CQ+VKAEHQ+P GLLQ
Sbjct: 717  LKEAHQSAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQ 776

Query: 538  PLPIPEWKWDKV 573
            PLPIPEWKW+++
Sbjct: 777  PLPIPEWKWEEI 788


>gb|AAY23262.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91759.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1416

 Score =  199 bits (507), Expect = 1e-55
 Identities = 97/192 (50%), Positives = 132/192 (68%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1    VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
            + + YHPGKANVV DALSR++  N+A     Q  L +E+ KL + VV+     G   ++ 
Sbjct: 969  LGIHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCRELEKLRLTVVQ----SGVPASLT 1024

Query: 181  IQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVP-KGEVRDEV 357
            +QP L  +IREAQ  D  +++   +++     +F I   G ++   RICVP K E+RD +
Sbjct: 1025 VQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGQRICVPTKKELRDLI 1084

Query: 358  LAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQ 537
            L EAH SAYSIHPG TKMYQD+K +FWW GMKR++A YV+ C +CQ+VKAEHQ+P GLLQ
Sbjct: 1085 LKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQ 1144

Query: 538  PLPIPEWKWDKV 573
            PLPIPEWKW+++
Sbjct: 1145 PLPIPEWKWEEI 1156


>gb|ABA95262.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1481

 Score =  199 bits (507), Expect = 1e-55
 Identities = 97/192 (50%), Positives = 132/192 (68%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1    VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
            + + YHPGKANVV DALSR++  N+A     Q  L +E+ KL + VV+     G   ++ 
Sbjct: 969  LGIHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCRELEKLRLTVVQ----SGVPASLT 1024

Query: 181  IQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVP-KGEVRDEV 357
            +QP L  +IREAQ  D  +++   +++     +F I   G ++   RICVP K E+RD +
Sbjct: 1025 VQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKEIRDLI 1084

Query: 358  LAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQ 537
            L EAH SAYSIHPG TKMYQD+K +FWW GMKR++A YV+ C +CQ+VKAEHQ+P GLLQ
Sbjct: 1085 LKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQ 1144

Query: 538  PLPIPEWKWDKV 573
            PLPIPEWKW+++
Sbjct: 1145 PLPIPEWKWEEI 1156


>gb|AAX93001.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91620.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1761

 Score =  199 bits (507), Expect = 1e-55
 Identities = 97/192 (50%), Positives = 132/192 (68%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1    VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
            + + YHPGKANVV DALSR++  N+A     Q  L +E+ KL + VV+     G   ++ 
Sbjct: 1227 LGIHYHPGKANVVADALSRKAYCNVAQIRPDQDRLCRELEKLRLTVVQ----SGVPASLT 1282

Query: 181  IQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVP-KGEVRDEV 357
            +QP L  +IREAQ  D  +++   +++     +F I   G ++   RICVP K E+RD +
Sbjct: 1283 VQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLI 1342

Query: 358  LAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQ 537
            L EAH SAYSIHPG TKMYQD+K +FWW GMKR++A YV+ C +CQ+VKAEHQ+P GLLQ
Sbjct: 1343 LKEAHESAYSIHPGSTKMYQDIKAYFWWTGMKRDVAEYVALCDICQRVKAEHQRPAGLLQ 1402

Query: 538  PLPIPEWKWDKV 573
            PLPIPEWKW+++
Sbjct: 1403 PLPIPEWKWEEI 1414


>gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAV59415.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1649

 Score =  199 bits (506), Expect = 1e-55
 Identities = 98/192 (51%), Positives = 132/192 (68%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1    VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
            + + YHPGKANVV DALSR++  N+A     Q  L +E+ KL + VV+     G   ++ 
Sbjct: 1114 LGIHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCRELEKLRLTVVQ----SGVPASLT 1169

Query: 181  IQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVP-KGEVRDEV 357
            IQP L  +IREAQ  D  +++   +++     +F I   G ++   RICVP K E+RD +
Sbjct: 1170 IQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLI 1229

Query: 358  LAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQ 537
            L EAH SAYSIHPG TKMYQD+K +FWW GMKR++A YV+ C +CQ+VKAEHQ+P GLLQ
Sbjct: 1230 LKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQ 1289

Query: 538  PLPIPEWKWDKV 573
            PLPIPEWKW+++
Sbjct: 1290 PLPIPEWKWEEI 1301


>gb|AAP53894.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1829

 Score =  199 bits (506), Expect = 1e-55
 Identities = 97/192 (50%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1    VNLQYHPGKANVVPDALSRRSEWNLAYQITQQKELIKEMMKLDIMVVRRSDTQGQIMNMQ 180
            + + YHPGKANVV DALSR++  N+A     Q  L +E+ KL + VV+     G   ++ 
Sbjct: 1317 LGIHYHPGKANVVADALSRKTYCNVAQIRPDQDHLCRELEKLRLTVVQ----SGVPASLT 1372

Query: 181  IQPILLEKIREAQSSDPRLQQFRDQVEAGLRFDFQIRSDGAMYFDNRICVP-KGEVRDEV 357
            +QP L  +IREAQ  D  +++   +++     +F I + G ++   RICVP K E+RD +
Sbjct: 1373 VQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSIDNQGTVWCGPRICVPAKKELRDLI 1432

Query: 358  LAEAHSSAYSIHPGGTKMYQDLKKHFWWNGMKREIARYVSKCLVCQQVKAEHQKPPGLLQ 537
            L EAH SAYSIHPG TKMYQD+K +FWW GMKR++A YV+ C +CQ+VKAEHQ+P GLLQ
Sbjct: 1433 LKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQ 1492

Query: 538  PLPIPEWKWDKV 573
            PLPIPEWKW+++
Sbjct: 1493 PLPIPEWKWEEI 1504